BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 027412
         (223 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/220 (66%), Positives = 177/220 (80%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E HL+AAL LF  + +RG +PD+ T+NT+IC YC+  RLD+AVQLF K+T  QL+PN+I
Sbjct: 634 REGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAI 693

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN-MKSAFDVYEE 122
           TFTILIDAFC+EGRMDDA +MFSKMLE+GP+ N+VTYSCLI GYFKSQ+ M+S   +Y E
Sbjct: 694 TFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNE 753

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M ENNI+PNIVSYSILIDGLCKRGLM+EA  AF CALD HLLPDV+ Y ILIRGYCK GR
Sbjct: 754 MLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGR 813

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            TEAM LYD+ML N + PD  L  TL +Y L+ +G++  C
Sbjct: 814 LTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKAGAKHLC 853



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 109/196 (55%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  +   G +P+++T++T+I  YC    LD+A  LF+ +    + P+ I ++ILID   K
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFK 354

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            GR++D   +    L+KG K +VV +S  +D Y K  ++     +Y+ M    ISPN+VS
Sbjct: 355 AGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVS 414

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            SILI G C+ G + EA   F   L     P ++TY+ LI G+CK+G   +   LY+ M+
Sbjct: 415 CSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMI 474

Query: 195 RNGIMPDGLLLSTLAD 210
           +    PD ++ S L +
Sbjct: 475 KKRCEPDTIVYSVLIN 490



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL+ F Q  +RGL P++ T NT++  +C L  +  A++++  +  + +K +
Sbjct: 492 LCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKAD 551

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+TILI    + GR+D+A M+F +ML+K  K +V+TY  LIDG  K +   +   +++
Sbjct: 552 TVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFD 611

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            MC+N ++P+I  Y++LI+   + G +E AL  F   ++    PDV T+  +I  YC   
Sbjct: 612 FMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFK 671

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A+QL+  M    + P+ +  + L D
Sbjct: 672 RLDDAVQLFAKMTSEQLRPNAITFTILID 700



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+   +L     D+G++ D++ +++ +  Y  +  L   +Q+++++    + PN
Sbjct: 352 LFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPN 411

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++ +ILI  FC+ GR+ +A  +F ++L+ G + +++TYS LI G+ KS N++  F +YE
Sbjct: 412 VVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYE 471

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP---------------- 165
           +M +    P+ + YS+LI+GLCK+GL+ +AL  F  A++  L P                
Sbjct: 472 DMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLK 531

Query: 166 -------------------DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                              D VTY ILI+G  + GR  EA+ L+  ML+    PD +   
Sbjct: 532 CIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYC 591

Query: 207 TLAD 210
           TL D
Sbjct: 592 TLID 595



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 106/191 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF Q+   G EP I+TY+ +I G+C    L +   L+E +   + +P++I +++LI+
Sbjct: 431 ACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLIN 490

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G + DA   F + + +G   NV T + L+D + + + +  A  VY  M   NI  
Sbjct: 491 GLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA 550

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ILI G  + G ++EAL  F   L     PDV+TY  LI G CK  + +  + ++
Sbjct: 551 DTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIF 610

Query: 191 DSMLRNGIMPD 201
           D M +N + PD
Sbjct: 611 DFMCKNAVAPD 621



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 100/208 (48%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           +G+L     E     Y  ++  + +   ++  ++  + L       + IT   ++     
Sbjct: 225 YGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWM 284

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           +  +  A   F+ ++  GPK NVVT+S LID Y K  N+  AF +++ M  N ++P+++ 
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           YSILIDGL K G +E+       ALD  +  DVV ++  +  Y K G     +Q+Y  ML
Sbjct: 345 YSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRML 404

Query: 195 RNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             GI P+ +  S L     Q+    E C
Sbjct: 405 NEGISPNVVSCSILIKGFCQNGRILEAC 432



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 37/186 (19%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S+ +  LI+++C++G  D +  +F  +  KG   +      L+     S  ++   D Y
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-----------NHLL----- 164
            E+C          Y  +++    +G +E  L  FH AL            N +L     
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGL-RFHKALVQGGFGLDIITCNKILKGIWM 284

Query: 165 --------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
                               P+VVT++ LI  YCK G   +A  L+D M  NG+ PD ++
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 205 LSTLAD 210
            S L D
Sbjct: 345 YSILID 350


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/216 (62%), Positives = 170/216 (78%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  +E  ++  L+L  ++   GLEPDI+TYNT+ICGYCSL    +A++LFE L C + +P
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ITFTILIDA+CK+GRMDDA ++FS MLE+GP+ N++TYSCLIDGYFK++N +SAF++Y
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E+M  + +SPNIVSYSILIDGLCK+GLMEEA  AF CA+  HLLPDV+ Y ILIRGYCK 
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           GR  EAM LYD ML NGIMPD LL   LA+Y  Q S
Sbjct: 779 GRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDS 814



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 118/204 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A   F  +   G  P+++T++T+I  YC   RLDEA  L+  +    + P+ + ++
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+   + G++++   +FS  L +G K +VV +S ++D Y +  ++  A +VY  M + 
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+YSILI+GLC+ G + EA   F   L   L P V+TY+ LI G+CK+    + 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             LY  MLR G +PD ++ S L +
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLIN 458



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 135/244 (55%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L+    LF     RG++ D++ +++I+  Y  +  L +A++++ ++    + PN
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ILI+  C+ GR+ +A  +F ++L++G + +V+TYS LIDG+ KS+N++  F +Y 
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LDNHL------------ 163
            M      P++V  S+LI+GL ++G+M+EAL  F  A      L+N+L            
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 164 -----------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                            +PDVVTY +L++G  + GR  EA+ L+  +L+ G  PD ++  
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 207 TLAD 210
           TL D
Sbjct: 560 TLID 563



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   ++  L     L +RGL P I+  N I+ G C  N++  A   F+ +      PN
Sbjct: 215 FLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPN 274

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+ +CKE R+D+A  +++ M+EKG   ++V YS LI+G F++  ++    ++ 
Sbjct: 275 LVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFS 334

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                 +  ++V +S ++D   + G + +A+  +   L   + P+VVTY+ILI G C+ G
Sbjct: 335 MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  ++  +L+ G+ P  L  S+L D
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLID 423



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 106/191 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +FGQ+  +GLEP ++TY+++I G+C    L +   L+  +      P+ +  ++LI+
Sbjct: 399 ACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              ++G MD+A   F + +++G   N   ++ LIDG F+ +  +    +Y  M    + P
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y++L+ GL ++G ++EAL  F   L     PD + Y  LI G+CK   P   +Q++
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 191 DSMLRNGIMPD 201
             M  NGI PD
Sbjct: 579 KLMQSNGIFPD 589



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  LD AL LF QL  +G  PD I Y T+I G+C        +Q+F+ +    + P+
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPD 589

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + +LI+ F +EG +++   +  ++++ G + ++VTY+ +I GY   +    A  ++E
Sbjct: 590 ICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFE 649

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +      PN ++++ILID  CK G M++A+  F   L+    P+++TY+ LI GY K  
Sbjct: 650 VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTE 709

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +LY+ ML + + P+ +  S L D
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILID 738



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D AL+ F Q   RGL  +   +N +I G   L R  + ++++  +   ++ P+
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+L+    ++GR+D+A  +F ++L+KG   + + Y  LIDG+ K ++  +   +++
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+I  Y++LI+   + G +E  L      +   L PD+VTY  +I GYC   
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             ++A++L++ +      P+ +  + L D
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILID 668



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 101/195 (51%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TY  ++ G     RLDEA+ LF +L      P+ I +  LID FCK+        +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M   G   ++  Y+ LI+ +F+   +++  ++  E+ +  + P+IV+Y+ +I G C 
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
             +  +A+  F         P+ +T+ ILI  YCK GR  +AM ++ SML  G  P+ L 
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 205 LSTLADYNLQSSGSQ 219
            S L D   ++  ++
Sbjct: 698 YSCLIDGYFKTENTE 712



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 34/223 (15%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  R  +P    ++ ++  + +L  L E    F         P+++ ++ L+  +C+ G 
Sbjct: 100 LRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGS---NPSTV-YSFLLHCYCRNGM 155

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC------------- 124
           +D A   F+ M + G   +    S ++D    S  +    + YEEMC             
Sbjct: 156 VDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSF 215

Query: 125 -----------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
                            E  + P IV  + ++ GLC    +  A   F   + +   P++
Sbjct: 216 LKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNL 275

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           VT++ LI  YCK  R  EA  LY+ M+  GI+PD ++ S L +
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/219 (62%), Positives = 172/219 (78%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  +E  ++  L+L  ++   GLEPDI+TYNT+ICGYCSL    +A++LFE L C + +P
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ITFTILIDA+CK+GRMDDA ++FS MLE+GP+ N++TYSCLIDGYFK++N +SAF++Y
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E+M  + +SPNIVSYSILIDGLCK+GLMEEA  AF CA+  HLLPDV+ Y ILIRGYCK 
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           GR  EAM LYD ML NGIMPD LL   LA+Y  Q S ++
Sbjct: 779 GRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAK 817



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 118/204 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A   F  +   G  P+++T++T+I  YC   RLDEA  L+  +    + P+ + ++
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+   + G++++   +FS  L +G K +VV +S ++D Y +  ++  A +VY  M + 
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+YSILI+GLC+ G + EA   F   L   L P V+TY+ LI G+CK+    + 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             LY  MLR G +PD ++ S L +
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLIN 458



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 135/244 (55%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L+    LF     RG++ D++ +++I+  Y  +  L +A++++ ++    + PN
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ILI+  C+ GR+ +A  +F ++L++G + +V+TYS LIDG+ KS+N++  F +Y 
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LDNHL------------ 163
            M      P++V  S+LI+GL ++G+M+EAL  F  A      L+N+L            
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 164 -----------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                            +PDVVTY +L++G  + GR  EA+ L+  +L+ G  PD ++  
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYC 559

Query: 207 TLAD 210
           TL D
Sbjct: 560 TLID 563



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   ++  L     L +RGL P I+  N I+ G C  N++  A   F+ +      PN
Sbjct: 215 FLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPN 274

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+ +CKE R+D+A  +++ M+EKG   ++V YS LI+G F++  ++    ++ 
Sbjct: 275 LVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFS 334

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                 +  ++V +S ++D   + G + +A+  +   L   + P+VVTY+ILI G C+ G
Sbjct: 335 MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  ++  +L+ G+ P  L  S+L D
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLID 423



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 106/191 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +FGQ+  +GLEP ++TY+++I G+C    L +   L+  +      P+ +  ++LI+
Sbjct: 399 ACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              ++G MD+A   F + +++G   N   ++ LIDG F+ +  +    +Y  M    + P
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y++L+ GL ++G ++EAL  F   L     PD + Y  LI G+CK   P   +Q++
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 191 DSMLRNGIMPD 201
             M  NGI PD
Sbjct: 579 KLMQSNGIFPD 589



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  LD AL LF QL  +G  PD I Y T+I G+C        +Q+F+ +    + P+
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPD 589

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + +LI+ F +EG +++   +  ++++ G + ++VTY+ +I GY   +    A  ++E
Sbjct: 590 ICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFE 649

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +      PN ++++ILID  CK G M++A+  F   L+    P+++TY+ LI GY K  
Sbjct: 650 VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTE 709

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +LY+ ML + + P+ +  S L D
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILID 738



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D AL+ F Q   RGL  +   +N +I G   L R  + ++++  +   ++ P+
Sbjct: 460 LSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+L+    ++GR+D+A  +F ++L+KG   + + Y  LIDG+ K ++  +   +++
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+I  Y++LI+   + G +E  L      +   L PD+VTY  +I GYC   
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             ++A++L++ +      P+ +  + L D
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILID 668



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 101/195 (51%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TY  ++ G     RLDEA+ LF +L      P+ I +  LID FCK+        +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M   G   ++  Y+ LI+ +F+   +++  ++  E+ +  + P+IV+Y+ +I G C 
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
             +  +A+  F         P+ +T+ ILI  YCK GR  +AM ++ SML  G  P+ L 
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 205 LSTLADYNLQSSGSQ 219
            S L D   ++  ++
Sbjct: 698 YSCLIDGYFKTENTE 712



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 34/233 (14%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  R  +P    ++ ++  + +L  L E    F         P+++ ++ L+  +C+ G 
Sbjct: 100 LRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGS---NPSTV-YSFLLHCYCRNGM 155

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC------------- 124
           +D A   F+ M + G   +    S ++D    S  +    + YEEMC             
Sbjct: 156 VDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSF 215

Query: 125 -----------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
                            E  + P IV  + ++ GLC    +  A   F   + +   P++
Sbjct: 216 LKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNL 275

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           VT++ LI  YCK  R  EA  LY+ M+  GI+PD ++ S L +   ++   +E
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/225 (55%), Positives = 154/225 (68%), Gaps = 5/225 (2%)

Query: 2   LIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+ +CH ++ A K F  L +  +EPDI+TYNT+ICGYCSL RLDEA ++FE L      P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++T TILI   CK   MD A  MFS M EKG K N VTY CL+D + KS +++ +F ++
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM E  ISP+IVSYSI+IDGLCKRG ++EA   FH A+D  LLPDVV YAILIRGYCK 
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN----LQSSGSQEH 221
           GR  EA  LY+ MLRNG+ PD LL   L++YN    L S G   H
Sbjct: 761 GRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVH 805



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 1/217 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A +L   + D G  P+++T+ T+I G+C    +D A  LF+ +    ++P+ I ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID + K G +     +FS+ L KG K +VV +S  ID Y KS ++ +A  VY+ M   
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+Y+ILI GLC+ G + EA   +   L   + P +VTY+ LI G+CK G     
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             LY+ M++ G  PD ++   L D  L   G   H +
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVD-GLSKQGLMLHAM 481



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 35/253 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF------------- 50
           K   +D A  LF  +  RG+EPD+I Y+T+I GY     L    +LF             
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357

Query: 51  ----------------------EKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                                 +++ C  + PN +T+TILI   C++GR+ +A  M+ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L++G + ++VTYS LIDG+ K  N++S F +YE+M +    P++V Y +L+DGL K+GLM
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+      L   +  +VV +  LI G+C+  R  EA++++  M   GI PD    +T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 209 ADYNLQSSGSQEH 221
              ++      +H
Sbjct: 538 MRVSIMEDAFCKH 550



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 6/205 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L  A  ++ ++  +G+ P+++TY  +I G C   R+ EA  ++ ++    ++P+ 
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ LID FCK G +     ++  M++ G   +VV Y  L+DG  K   M  A     +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR------G 176
           M   +I  N+V ++ LIDG C+    +EAL  F       + PDV T+  ++R       
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
           +CK  +PT  +QL+D M RN I  D
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISAD 571



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 41/239 (17%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++GQ+  RG+EP I+TY+++I G+C    L     L+E +  +   P+ + + +L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K+G M  A     KML +  + NVV ++ LIDG+ +      A  V+  M    I P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 131 NIVSY------SILIDGLCKR-----GL------------------------------ME 149
           ++ ++      SI+ D  CK      GL                              +E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +A   F+  ++  + PD+VTY  +I GYC   R  EA ++++ +      P+ + L+ L
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 9/149 (6%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A+++F  + ++G +P+ +TY  ++  +     ++ + +LFE++    + P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + ++++I+ID  CK GR+D+AT +F + ++     +VV Y+ LI GY K   +  A  +Y
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLME 149
           E M  N + P         D L +R L E
Sbjct: 771 EHMLRNGVKP---------DDLLQRALSE 790


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/225 (55%), Positives = 154/225 (68%), Gaps = 5/225 (2%)

Query: 2   LIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+ +CH ++ A K F  L +  +EPDI+TYNT+ICGYCSL RLDEA ++FE L      P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++T TILI   CK   MD A  MFS M EKG K N VTY CL+D + KS +++ +F ++
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM E  ISP+IVSYSI+IDGLCKRG ++EA   FH A+D  LLPDVV YAILIRGYCK 
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN----LQSSGSQEH 221
           GR  EA  LY+ MLRNG+ PD LL   L++YN    L S G   H
Sbjct: 790 GRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVH 834



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 1/217 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A +L   + D G  P+++T+ T+I G+C    +D A  LF+ +    ++P+ I ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID + K G +     +FS+ L KG K +VV +S  ID Y KS ++ +A  VY+ M   
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+Y+ILI GLC+ G + EA   +   L   + P +VTY+ LI G+CK G     
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             LY+ M++ G  PD ++   L D  L   G   H +
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVD-GLSKQGLMLHAM 481



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 35/252 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF------------- 50
           K   +D A  LF  +  RG+EPD+I Y+T+I GY     L    +LF             
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357

Query: 51  ----------------------EKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                                 +++ C  + PN +T+TILI   C++GR+ +A  M+ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L++G + ++VTYS LIDG+ K  N++S F +YE+M +    P++V Y +L+DGL K+GLM
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+      L   +  +VV +  LI G+C+  R  EA++++  M   GI PD    +T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 209 ADYNLQSSGSQE 220
              ++     +E
Sbjct: 538 MRVSIMEGRLEE 549



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 101/191 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++GQ+  RG+EP I+TY+++I G+C    L     L+E +  +   P+ + + +L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K+G M  A     KML +  + NVV ++ LIDG+ +      A  V+  M    I P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +++ ++      G +EEAL+ F       L PD + Y  LI  +CK  +PT  +QL+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 191 DSMLRNGIMPD 201
           D M RN I  D
Sbjct: 590 DLMQRNKISAD 600



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L  A  ++ ++  +G+ P+++TY  +I G C   R+ EA  ++ ++    ++P+ 
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ LID FCK G +     ++  M++ G   +VV Y  L+DG  K   M  A     +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   +I  N+V ++ LIDG C+    +EAL  F       + PDV T+  ++R     GR
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA+ L+  M + G+ PD L   TL D
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLID 574



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 109/198 (55%), Gaps = 4/198 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ++K+ GQ     +  +++ +N++I G+C LNR DEA+++F  +    +KP+  TFT ++ 
Sbjct: 484 SVKMLGQ----SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
               EGR+++A  +F +M + G + + + Y  LID + K         +++ M  N IS 
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I   +++I  L K   +E+A   F+  ++  + PD+VTY  +I GYC   R  EA +++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + +      P+ + L+ L
Sbjct: 660 ELLKVTPFGPNTVTLTIL 677



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 9/149 (6%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A+++F  + ++G +P+ +TY  ++  +     ++ + +LFE++    + P
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + ++++I+ID  CK GR+D+AT +F + ++     +VV Y+ LI GY K   +  A  +Y
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLME 149
           E M  N + P         D L +R L E
Sbjct: 800 EHMLRNGVKP---------DDLLQRALSE 819


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 131/209 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A+ L  ++ DRG+ PD++TY+TI+ G+CSL  L+EA  LF ++    + PN
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TFTIL+D  CKEG + +A  +F  M +KG + N  TY+ L+DGY  +  M  A  V +
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +   +P + SY+ILI+G CKR  ++EA        +  L PD VTY+ L++G C+ G
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP EA+ L+  M  +G++PD +  STL D
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLD 450



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 116/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A+ + G++   G++PD IT+NT+I G C    + EAV LF ++     +P+ I+++
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +  KM EKG K N+V Y+ +ID   K   +  A D+  EM + 
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR 261

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++V+YS ++ G C  G + EA   F+  +  +++P+ VT+ IL+ G CK G  +EA
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++++M + G  P+    + L D
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMD 345



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+ LF ++  RG +PD+I+Y+T+I G C       A+QL  K+     KPN + 
Sbjct: 175 EGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVA 234

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T +ID+ CK+  ++DA  + S+M+++G   +VVTYS ++ G+    ++  A  ++ EM 
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             N+ PN V+++IL+DGLCK G++ EA   F         P+  TY  L+ GYC   +  
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354

Query: 185 EAMQLYDSMLRNGIMP 200
           EA ++ D M+  G  P
Sbjct: 355 EAQKVLDIMVDKGCAP 370



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +T +G EP+  TYN ++ GYC  N++DEA ++ + +      P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +CK  R+D+A  +  +M EK    + VTYS L+ G  +    + A ++++
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC + + P++++YS L+DGLCK G ++EAL       ++ + PD+V Y ILI G   AG
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491

Query: 182 RPTEAMQLYDSMLRNGIMP---------DGLLLSTLAD 210
           +   A +L+  +  +GI P          GLL   L+D
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSD 529



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 111/195 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A K+   + D+G  P + +YN +I GYC   RLDEA  L  +++  +L P+++T++
Sbjct: 352 QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYS 411

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   C+ GR  +A  +F +M   G   +++TYS L+DG  K  ++  A  + + M E+
Sbjct: 412 TLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQES 471

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+IV Y+ILI+G+   G +E A   F     + + P + TY I+I+G  K G   EA
Sbjct: 472 KIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEA 531

Query: 187 MQLYDSMLRNGIMPD 201
            +L+  M  +G +P+
Sbjct: 532 YELFRKMEDDGFLPN 546



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K+      + L  Q+   G+  ++ + N +I   C LN +  A+ +  K+  + ++P+
Sbjct: 102 IAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPD 161

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITF  LI+  C EG + +A  +F++M+ +G + +V++YS +I+G  KS N   A  +  
Sbjct: 162 AITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLR 221

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    PN+V+Y+ +ID LCK  L+ +A+      +D  + PDVVTY+ ++ G+C  G
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  L++ M+   +MP+ +  + L D
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVD 310



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 116/207 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A  L  +++++ L PD +TY+T++ G C + R  EA+ LF+++    L P+ +
Sbjct: 384 KRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLM 443

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ L+D  CK G +D+A  +   M E   + ++V Y+ LI+G F +  ++ A +++ ++
Sbjct: 444 TYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL 503

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I P I +Y+I+I GL K GL +EA   F    D+  LP+  +Y ++I+G+ +    
Sbjct: 504 FADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDS 563

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A++L D M+      D      L D
Sbjct: 564 STAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 78/139 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD ALKL   + +  +EPDI+ YN +I G     +L+ A +LF KL    ++P 
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I    KEG  D+A  +F KM + G   N  +Y+ +I G+ ++Q+  +A  + +
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLID 571

Query: 122 EMCENNISPNIVSYSILID 140
           EM     S +  ++ +L+D
Sbjct: 572 EMVGKRFSADSSTFQMLLD 590



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 2/177 (1%)

Query: 36  GYCSLNRL--DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
           G+ S N +  D+A+  F ++  +  +P+ + F   + +  K+ +      + ++M   G 
Sbjct: 64  GFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGV 123

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
             NV + + LI+   +  ++  A  V  +M +  I P+ ++++ LI+G C  G ++EA+ 
Sbjct: 124 THNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVG 183

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            F+  +     PDV++Y+ +I G CK+G  + A+QL   M   G  P+ +  +T+ D
Sbjct: 184 LFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID 240


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 128/209 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++   ++ DRG+ PD++TYNTI+ G+CSL +L+EA +LF+++    + P+
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF IL+D  CKEG + +A  +   M EKG + N  TY+ L+DGY     M  A  V  
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +PN+ SY+ILI+G CK   M EA        + +L PD VTY+ L++G C+ G
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP EA+ L+  M  +G++PD +  S L D
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLD 454



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 115/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D A+ + G++   G++PD IT+NT+I G C+  ++ EAV LF ++     +PN I++ 
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYN 205

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +F KM +   K NVVTY+ +ID   K + +  A +   EM + 
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR 265

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++V+Y+ ++ G C  G + EA   F   +  +++PD VT+ IL+ G CK G  +EA
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             + ++M   G  P+    + L D
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMD 349



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 125/218 (57%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +T++G EP+  TYN ++ GYC  N++DEA+++   +      PN
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +CK  RM++A  + S+M EK    + VTYS L+ G  +    + A ++++
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC + + P++++YSIL+DG CK G ++EAL       +  + P+++ Y ILIRG   AG
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495

Query: 182 RPTEAMQLYDSMLRNGIMPD---------GLLLSTLAD 210
           +   A +L+  +  +GI PD         GLL   L+D
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSD 533



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 123/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K+    +A+ L  Q+   G+  ++ + N +I   C L+ +D AV +  K+  + ++P+
Sbjct: 106 IAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPD 165

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITF  LI+  C EG++ +A  +F++M+  G + NV++Y+ +I+G  K+ N   A  V+ 
Sbjct: 166 AITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFR 225

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +N   PN+V+Y+ +ID LCK  L+ EA+      +D  + PDVVTY  ++ G+C  G
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLG 285

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +L+  M+   +MPD +  + L D
Sbjct: 286 QLNEATRLFKEMVGRNVMPDTVTFNILVD 314



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 120/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  +++++ L PD +TY+T++ G C + R  EA+ LF+++    L P+ +
Sbjct: 388 KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++IL+D FCK G +D+A  +  +M E+  K N++ Y+ LI G F +  ++ A +++ ++
Sbjct: 448 AYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I P+I +Y+++I GL K GL +EA   F    D+  LPD  +Y ++I+G+ +    
Sbjct: 508 SADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDS 567

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A+QL D M+      D      L D
Sbjct: 568 STAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A+ LF ++   G EP++I+YNT+I G C       AV++F K+   + KPN
Sbjct: 176 LCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPN 235

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID+ CK+  +++A    S+M+++G   +VVTY+ ++ G+     +  A  +++
Sbjct: 236 VVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK 295

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL-- 164
           EM   N+ P+ V+++IL+DGLCK G++ EA                Y ++  +D + L  
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN 355

Query: 165 ------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                             P++ +Y ILI GYCK+ R  EA +L   M    + PD +  S
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415

Query: 207 TL 208
           TL
Sbjct: 416 TL 417



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 112/195 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+K+ G +  +G  P++ +YN +I GYC   R++EA +L  +++   L P+++T++
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   C+ GR  +A  +F +M   G   +++ YS L+DG+ K  ++  A  + +EM E 
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PNI+ Y+ILI G+   G +E A   F     + + PD+ TY ++I+G  K G   EA
Sbjct: 476 RIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEA 535

Query: 187 MQLYDSMLRNGIMPD 201
            + +  M  +G +PD
Sbjct: 536 YEFFRKMEDDGFLPD 550



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE   D A + F ++ D G  PD  +YN II G+        A+QL +++   +   +
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585

Query: 62  SITFTILID 70
           S TF +L+D
Sbjct: 586 SSTFQMLLD 594


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 131/207 (63%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H++ A  L+ ++  +G+ P+++TY+ +I G+ ++ +L +A+ LF K+    +KP+  
Sbjct: 209 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVY 268

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+D FCK+G+M +   +F+ M+++G K NVVTY  L+DGY   + +  A  +   M
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM 328

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ++P+I SY+ILIDG CK   ++EA+  F      H++PDVVTY  LI G CK G+ 
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A++L D M   G+ PD +  S++ D
Sbjct: 389 SYALKLVDEMHDRGVPPDIITYSSILD 415



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 107/194 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL     +   G + D + Y T+I G C +     A+ L  ++    ++PN + ++ 
Sbjct: 143 IHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYST 202

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+  ++DA  ++S+M+ KG   NVVTYS LI G+F    +K A D++ +M   N
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN 262

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ +++IL+DG CK G M+E    F   +   + P+VVTY  L+ GYC      +A 
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAK 322

Query: 188 QLYDSMLRNGIMPD 201
            +  +M + G+ PD
Sbjct: 323 SILYTMSQRGVNPD 336



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 116/202 (57%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +   ++ RG+ PDI +YN +I G+C + ++DEA+ LF+++    + P+
Sbjct: 314 LVKE--VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPD 371

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G++  A  +  +M ++G   +++TYS ++D   K+  +  A  +  
Sbjct: 372 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 431

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ +  I PN+ +Y+ILIDGLCK G +E+A   F   L       V TY ++I G+C  G
Sbjct: 432 KLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              EA+ L   M  N  +PD +
Sbjct: 492 LFDEALALLSKMKDNSCIPDAV 513



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 112/188 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  + + PD++TYN++I G C L ++  A++L +++    + P+ IT++ 
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK  ++D A  + +K+ ++G + N+ TY+ LIDG  K   ++ A +++E++    
Sbjct: 413 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +  + +Y+++I G C +GL +EAL       DN  +PD VTY I+IR         +A 
Sbjct: 473 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAE 532

Query: 188 QLYDSMLR 195
           +L + + R
Sbjct: 533 KLREMITR 540



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 112/194 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +     +F  +  +G++P+++TY +++ GYC +  +++A  +   ++   + P+  
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILID FCK  ++D+A  +F +M  K    +VVTY+ LIDG  K   +  A  + +EM
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+I++YS ++D LCK   +++A+       D  + P++ TY ILI G CK GR 
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRL 458

Query: 184 TEAMQLYDSMLRNG 197
            +A  +++ +L  G
Sbjct: 459 EDAHNIFEDLLVKG 472



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 104/189 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P+ IT+ T+I G C   ++ +A+   + +  +  + + + +  LI   CK G    A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  ++     + NVV YS +IDG  K +++  AFD+Y EM    ISPN+V+YS LI G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
               G +++A+  F+  +  ++ PDV T+ IL+ G+CK G+  E   ++  M++ GI P+
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 202 GLLLSTLAD 210
            +   +L D
Sbjct: 302 VVTYCSLMD 310



 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +F  L  +G    + TY  +I G+C+    DEA+ L  K+      P+
Sbjct: 452 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++T+ I+I +   +   D A  +  +M+ +G
Sbjct: 512 AVTYEIIIRSLFDKDENDKAEKL-REMITRG 541


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 124/194 (63%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++  +G+ PD++TY+ +I G+C L +L +A+ LF K+    +KP+  TF I
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++AFCK+G+M +   +F  M+++G K N VTY+ L+DGY   + +  A  ++  M +  
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P+I SYSI+I+G CK    +EA+  F      +++PDVVTY+ LI G  K+GR + A+
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 188 QLYDSMLRNGIMPD 201
           QL D M   G+ P+
Sbjct: 421 QLVDQMHDRGVPPN 434



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 119/208 (57%), Gaps = 1/208 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL L  ++    ++P+++ YNTII   C +  ++EA  LF ++    + P+ +T++ LI
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G++ DA  +F+KM+ +  K +V T++ L++ + K   MK    V++ M +  I 
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN V+Y+ L+DG C    + +A   F+      + PD+ +Y+I+I G+CK  +  EAM L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  M R  I+PD +  S+L D  L  SG
Sbjct: 388 FKEMHRKNIIPDVVTYSSLID-GLSKSG 414



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 111/201 (55%), Gaps = 2/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  +   G+ PDI +Y+ +I G+C + + DEA+ LF+++    + P+
Sbjct: 342 LVKE--VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID   K GR+  A  +  +M ++G   N+ TY+ ++D   K+  +  A  +  
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  +    P+I +YSILI GLC+ G +E+A   F   L      DV  Y I+I+G+C  G
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEG 519

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
              EA+ L   M  NG +PD 
Sbjct: 520 LFNEALALLSKMEDNGCIPDA 540



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 115/194 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +     +F  +  +G++P+ +TYN+++ GYC +  +++A  +F  +    + P+  
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++I+I+ FCK  + D+A  +F +M  K    +VVTYS LIDG  KS  +  A  + ++M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PNI +Y+ ++D LCK   +++A+       D    PD+ TY+ILI+G C++G+ 
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 184 TEAMQLYDSMLRNG 197
            +A ++++ +L  G
Sbjct: 487 EDARKVFEDLLVKG 500



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 106/195 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A     ++   G   D I+Y T+I G C +     A+ L +++    ++PN + + 
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK   +++A  +FS+M+ KG   +VVTYS LI G+     +K A D++ +M   
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P++ +++IL++  CK G M+E    F   +   + P+ VTY  L+ GYC      +A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M + G+ PD
Sbjct: 350 KSIFNTMAQGGVNPD 364



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    L L  ++  RG++P+++  N +I  +C L  +  A  +F K+  +   P+
Sbjct: 95  LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPD 154

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITFT L    C +G++  A +   K++  G   + ++Y  LI G  K    ++A D+ +
Sbjct: 155 TITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ 214

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  N + PN+V Y+ +ID +CK  L+ EA   F   +   + PDVVTY+ LI G+C  G
Sbjct: 215 RVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILG 274

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L++ M+   I PD    + L +
Sbjct: 275 KLKDAIDLFNKMILENIKPDVYTFNILVN 303



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 108/200 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++   G  PD IT+ T+  G C   ++ +A    +K+  +    + I++  LI 
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  +  ++     + NVV Y+ +ID   K + +  AFD++ EM    ISP
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+YS LI G C  G +++A+  F+  +  ++ PDV T+ IL+  +CK G+  E   ++
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M++ GI P+ +  ++L D
Sbjct: 319 DMMMKQGIKPNFVTYNSLMD 338



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 103/191 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A+ LF ++  + + PD++TY+++I G     R+  A+QL +++    + PN  T+  
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNS 440

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK  ++D A  + +K  +KG + ++ TYS LI G  +S  ++ A  V+E++    
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + ++ +Y+I+I G C  GL  EAL       DN  +PD  TY I+I    K      A 
Sbjct: 501 YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560

Query: 188 QLYDSMLRNGI 198
           +L   M+  G+
Sbjct: 561 KLLREMIARGL 571



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 94/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L  R   P    +N I+            + L +K+    +KPN +   I
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC+ G +  A  +F+K+L+ G   + +T++ L  G      ++ AF  ++++    
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              + +SY  LI GLCK G    AL        N + P+VV Y  +I   CK     EA 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  GI PD +  S L
Sbjct: 246 DLFSEMVSKGISPDVVTYSAL 266



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 64/131 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  +  D+G +PDI TY+ +I G C   +L++A ++FE L       +
Sbjct: 445 LCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLD 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +TI+I  FC EG  ++A  + SKM + G   +  TY  +I   FK      A  +  
Sbjct: 505 VYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLR 564

Query: 122 EMCENNISPNI 132
           EM    +  N 
Sbjct: 565 EMIARGLPLNF 575



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 73/150 (48%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K N I+++     F     +DDA  +F+++L +        ++ ++    KS++  +   
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + ++M    I PN+V+ +ILI+  C+ GL+  A   F   L    +PD +T+  L +G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             G+  +A   +D ++  G   D +   TL
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTL 196


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 128/205 (62%), Gaps = 6/205 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++  +G+ PD++TY+ +I G+C L +L++A+ LF K+    +KP+  TF I
Sbjct: 241 VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNI 300

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++AFCK+G+M +   +F  M+++G K N VTY+ L+DGY   + +  A  ++  M +  
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P+I SYSI+I+G CK    +EA+  F      +++PDVVTY+ LI G  K+GR + A+
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYN 212
           QL D M   G+ P      T+  YN
Sbjct: 421 QLVDQMHDRGVPP------TIRTYN 439



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 120/208 (57%), Gaps = 1/208 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL L  ++    ++P+++ YNTII   C +  ++EA  LF ++    + P+ +T++ LI
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALI 267

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G+++DA  +F+KM+ +  K +V T++ L++ + K   MK    V++ M +  I 
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN V+Y+ L+DG C    + +A   F+      + PD+ +Y+I+I G+CK  +  EAM L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  M R  I+PD +  S+L D  L  SG
Sbjct: 388 FKEMHRKNIIPDVVTYSSLID-GLSKSG 414



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 112/201 (55%), Gaps = 2/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  +   G+ PDI +Y+ +I G+C + + DEA+ LF+++    + P+
Sbjct: 342 LVKE--VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID   K GR+  A  +  +M ++G    + TY+ ++D   K   +  A  +  
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ +  I PN+ +YSILI GLC+ G +E+A   F   L      +V TY I+I+G+C  G
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEG 519

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
              EA+ L   M  NG +PD 
Sbjct: 520 LFNEALALLSKMEDNGCIPDA 540



 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    L L  ++  RG++P+++  N +I  +C L  +  A  +F K+  +   P+
Sbjct: 95  LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPD 154

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITFT LI   C +G++  A +   K++  G   + ++Y  LI G  K    ++A D+ +
Sbjct: 155 TITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ 214

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  N + PN+V Y+ +ID +CK  L+ EA   F   +   + PDVVTY+ LI G+C  G
Sbjct: 215 RVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILG 274

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L++ M+   I PD    + L +
Sbjct: 275 KLNDAIDLFNKMILENIKPDVYTFNILVN 303



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 115/194 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +     +F  +  +G++P+ +TYN+++ GYC +  +++A  +F  +    + P+  
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++I+I+ FCK  + D+A  +F +M  K    +VVTYS LIDG  KS  +  A  + ++M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P I +Y+ ++D LCK   +++A+       D  + P++ TY+ILI+G C++G+ 
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486

Query: 184 TEAMQLYDSMLRNG 197
            +A ++++ +L  G
Sbjct: 487 EDARKVFEGLLVKG 500



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 108/200 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++   G  PD IT+ T+I G C   ++ +A    +K+  +    + I++  LI 
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  +  ++     + NVV Y+ +ID   K + +  AFD++ EM    ISP
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+YS LI G C  G + +A+  F+  +  ++ PDV T+ IL+  +CK G+  E   ++
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M++ GI P+ +  ++L D
Sbjct: 319 DMMMKQGIKPNFVTYNSLMD 338



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 105/195 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A     ++   G   D I+Y T+I G C +     A+ L +++    ++PN + + 
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK   +++A  +FS+M+ KG   +VVTYS LI G+     +  A D++ +M   
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P++ +++IL++  CK G M+E    F   +   + P+ VTY  L+ GYC      +A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M + G+ PD
Sbjct: 350 KSIFNTMAQGGVNPD 364



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 103/193 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A+ LF ++  + + PD++TY+++I G     R+  A+QL +++    + P   T+  
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK  ++D A  + +K+ +KG + N+ TYS LI G  +S  ++ A  V+E +    
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + N+ +Y+I+I G C  GL  EAL       DN  +PD  TY I+I    K      A 
Sbjct: 501 HNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560

Query: 188 QLYDSMLRNGIMP 200
           +L   M+  G+ P
Sbjct: 561 KLLREMIARGVRP 573



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 95/201 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L  R   P    +N I+            + L +K+    +KPN +   I
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC+ G +  A  +F+K+L+ G   + +T++ LI G      ++ AF  ++++    
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              + +SY  LI GLCK G    AL        N + P+VV Y  +I   CK     EA 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  GI PD +  S L
Sbjct: 246 DLFSEMISKGISPDVVTYSAL 266



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  +L D+G++P++ TY+ +I G C   +L++A ++FE L       N
Sbjct: 445 LCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLN 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I  FC EG  ++A  + SKM + G   +  TY  +I   FK      A  +  
Sbjct: 505 VDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLR 564

Query: 122 EMCENNISPNIVS 134
           EM    + P  ++
Sbjct: 565 EMIARGVRPRQIA 577



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 74/150 (49%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K N I+++     F     +DDA  +F+++L +        ++ ++    KS++  +   
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + ++M    I PN+V+ +ILI+  C+ GL+  A   F   L    +PD +T+  LI+G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             G+  +A   +D ++  G   D +   TL
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTL 196


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 127/209 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   + A+  F ++ D+G+ P+++TY++I+ G+C+L +L+EA  LF+++    + PN
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPN 280

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TFTIL+D  CKEG + +A  +F  M E G + +  TYS L+DGY     M  A  +++
Sbjct: 281 TVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P++  Y+ILI+G CK   + EA        D  L PD VTY+ L++G+C+AG
Sbjct: 341 IMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG 400

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP  A +L+  M   G++PD +  S L D
Sbjct: 401 RPQVAQKLFKEMCSYGLLPDSITYSILLD 429



 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 113/191 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KLF ++   G  P +ITY TII G C +     A+QL +K+     KP+ + +  +ID
Sbjct: 160 AVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID 219

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+ R ++A   FS+M+++G   NVVTYS ++ G+     +  A  ++++M   N+ P
Sbjct: 220 SLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMP 279

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++IL+DGLCK G++ EA   F    +N + PD  TY+ L+ GYC   +  EA +L+
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339

Query: 191 DSMLRNGIMPD 201
           D M+  G  P 
Sbjct: 340 DIMVGKGFAPS 350



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 1/210 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A    G++   GL+P  +T+ T++ G CS  ++ +AV+LF+++  +   P+ IT+T
Sbjct: 121 HVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYT 180

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I   CK G   +A  +  KM EKG K +VV Y+ +ID   K +    A   + EM + 
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ 240

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN+V+YS ++ G C  G + EA   F   +  +++P+ VT+ IL+ G CK G   EA
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 215
            ++++ M  NG+ PD    S L D Y LQS
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQS 330



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 125/221 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A ++F  +T+ G+EPD  TY+ ++ GYC  +++DEA +LF+ +      P+
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ILI+  CK  R+++A  + S+M ++    + VTYS L+ G+ ++   + A  +++
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC   + P+ ++YSIL+DGLCK G ++EA        ++ + P +  Y ILI+G C  G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +   A +L+ ++   GI P  +  + +    L+   S E C
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 108/197 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +D A KLF  +  +G  P +  YN +I G+C   RL+EA  L  ++    L P+++T
Sbjct: 329 QSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVT 388

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ L+  FC+ GR   A  +F +M   G   + +TYS L+DG  K  ++  AF + + M 
Sbjct: 389 YSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ 448

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ I P+I  Y+ILI G+C  G +E A   F       + P VVTY ++I G  K G   
Sbjct: 449 ESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSN 508

Query: 185 EAMQLYDSMLRNGIMPD 201
           EA +++  M+ NG +P+
Sbjct: 509 EACEMFRKMVVNGCLPN 525



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A  L  ++ DR L PD +TY+T++ G+C   R   A +LF+++    L P+SI
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  CK G +D+A  +   M E   + ++  Y+ LI G      +++A +++  +
Sbjct: 423 TYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNL 482

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y+++I GL K GL  EA   F   + N  LP+  TY + I+G+ + G P
Sbjct: 483 FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDP 542

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A++L + M+  G   D      L D
Sbjct: 543 SNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 37/237 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI- 69
           A+  F QL      P ++ +N ++            + L +++    ++PN  T TILI 
Sbjct: 53  AVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILIN 112

Query: 70  ------------------------------------DAFCKEGRMDDATMMFSKMLEKGP 93
                                               +  C + ++ DA  +F ++ + G 
Sbjct: 113 CLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGF 172

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
             +++TY+ +I G  K  +  +A  + ++M E    P++V+Y+ +ID LCK     EA+Y
Sbjct: 173 APSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMY 232

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            F   +D  + P+VVTY+ ++ G+C  G+  EA  L+  M+   +MP+ +  + L D
Sbjct: 233 FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVD 289



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A +L   + +  +EP I  YN +I G C+  +L+ A +LF  L    ++P+
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T++I    KEG  ++A  MF KM+  G   N  TY+  I G+ ++ +  +A  + E
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIE 550

Query: 122 EMCENNISPNIVSYSILID 140
           EM     S +  ++ +L+D
Sbjct: 551 EMVGRGFSADSSTFQMLLD 569



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 2/157 (1%)

Query: 54  TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           +   + P+SIT       +     + DA   F+++L   P   VV ++ L+    K ++ 
Sbjct: 26  STTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHY 85

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLC--KRGLMEEALYAFHCALDNHLLPDVVTYA 171
            +   + ++M  +NI PN+ + +ILI+ LC   R  +  A  A        L P  VT+ 
Sbjct: 86  STVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFG 145

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            L+ G C   +  +A++L+D + + G  P  +  +T+
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTI 182


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 130/207 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++PDI TY+++I G+C  +RLDEA  +FE +      PN
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK  R+D+   +F +M ++G   N VTY+ LI G+F++++  +A  V++
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + PNI++Y+ L+DGLCK G +E+A+  F     + + P + TY I+I G CKAG
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ PD ++ +T+
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTM 546



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 117/196 (59%), Gaps = 2/196 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A  +F  +  +   P+++TYNT+I G+C   R+DE V+LF +++   L  N++T+T
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F +    D+A M+F +M+  G   N++TY+ L+DG  K+  ++ A  V+E +  +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + P I +Y+I+I+G+CK G +E+    F C+L    + PDV+ Y  +I G+C+ G   E
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558

Query: 186 AMQLYDSMLRNGIMPD 201
           A  L+  M  +G +PD
Sbjct: 559 ADALFRKMREDGPLPD 574



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  ++    +E +++ Y+T+I   C     D+A+ LF ++    ++PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ LI   C   R  DA+ + S M+E+    NVVT++ LID + K   +  A  +Y+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+I +YS LI+G C    ++EA + F   +     P+VVTY  LI G+CKA 
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E ++L+  M + G++ + +  +TL
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTL 441



 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 120/209 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H D AL LF ++ ++G+ P++ITY+++I   C+  R  +A +L   +   ++ PN
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG++ +A  ++ +M+++    ++ TYS LI+G+     +  A  ++E
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  PN+V+Y+ LI+G CK   ++E +  F       L+ + VTY  LI G+ +A 
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  ++  M+ +G+ P+ +  +TL D
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 3/208 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G  PD IT+ T+I G    N+  EAV L +++     +PN 
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G +D A  + +KM     +ANVV YS +ID   K ++   A +++ E
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN+++YS LI  LC      +A       ++  + P+VVT+  LI  + K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +LYD M++  I PD    S+L +
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLIN 373



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  AL L G++   G EP I+T ++++ GYC   R+ +AV L +++  +  +P++I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI       +  +A  +  +M+++G + N+VTY  +++G  K  ++  AF++  +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I  N+V YS +ID LCK    ++AL  F    +  + P+V+TY+ LI   C   R 
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I P+ +  + L D
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALID 338



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 101/203 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LFG +      P I  +N ++     + + D  + L EK+  + +  N  T+ I
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC+  ++  A  +  KM++ G + ++VT S L++GY   + +  A  + ++M E  
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ ++++ LI GL       EA+      +     P++VTY +++ G CK G    A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M    I  + ++ ST+ D
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVID 268



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 77/160 (48%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           +LD+A+ LF  +   +  P+   F  L+ A  K  + D    +  KM   G   N+ TY+
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            LI+ + +   +  A  +  +M +    P+IV+ S L++G C    + +A+      ++ 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              PD +T+  LI G     + +EA+ L D M++ G  P+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 51/92 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ +F  L    +EP I TYN +I G C   ++++   LF  L+   +KP+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
            I +  +I  FC++G  ++A  +F KM E GP
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGP 571


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 128/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++PDI TY+++I G+C  +RLDEA  +FE +      PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A  +++
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLCK G +E+AL  F     + + PD+ TY I+I G CKAG
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ ++ +T+
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTM 541



 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    +E D++ YNTII G C    +D+A  LF K+    ++P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C  GR  DA+ + S M+E+    NVVT+S LID + K   +  A  +Y+
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+I +YS LI+G C    ++EA + F   +     P+VVTY  LI+G+CKA 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTL 436



 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 119/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A  LF ++  +G+ PD+ TYN++I   C+  R  +A +L   +   ++ PN
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPN 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LIDAF KEG++ +A  ++ +M+++    ++ TYS LI+G+     +  A  ++E
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  PN+V+Y+ LI G CK   +EE +  F       L+ + VTY  LI+G  +AG
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ PD +  S L D
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLD 473



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 120/209 (57%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A  +F  +  +   P+++TYNT+I G+C   R++E ++LF +++   L  N++T+ 
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    + G  D A  +F KM+  G   +++TYS L+DG  K   ++ A  V+E + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + P+I +Y+I+I+G+CK G +E+  +   C+L    + P+V+ Y  +I G+C+ G   E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDG-WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L+  M  +G +PD    +TL    L+
Sbjct: 554 ADALFREMKEDGTLPDSGCYNTLIRARLR 582



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 115/206 (55%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD +T+NT+I G    N+  EAV L +++     +P+ 
Sbjct: 161 CHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 220

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +++  CK G +D A  +  KM +   +A+VV Y+ +IDG  K +++  AF ++ +
Sbjct: 221 VTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNK 280

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++ +Y+ LI  LC  G   +A       ++  + P+VVT++ LI  + K G+
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I PD    S+L
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSL 366



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 115/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EPDI+T ++++ GYC   R+ +AV L +++  +  KP+++
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTV 186

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+++G + ++VTY  +++G  K  ++  A  + ++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I  ++V Y+ +IDGLCK   +++A   F+      + PDV TY  LI   C  GR 
Sbjct: 247 EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L  +M+   I P+ +  S L D
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALID 333



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 118/217 (54%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  ++LF +++ RGL  + +TYNT+I G       D A ++F+K+    + P+ I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  CK G+++ A ++F  + +   + ++ TY+ +I+G  K+  ++  +D++  +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN++ Y+ +I G C++GL EEA   F    ++  LPD   Y  LIR   + G  
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 586

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
             + +L   M   G + D     ++++ L D  L+ S
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LFG++      P I+ +N ++     + + D  + L E++  +++  +  ++ I
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC+  ++  A  +  KM++ G + ++VT S L++GY  S+ +  A  + ++M E  
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V+++ LI GL       EA+      +     PD+VTY  ++ G CK G    A+
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M +  I  D ++ +T+ D
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIID 263



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL +F  L    +EPDI TYN +I G C   ++++   LF  L+   +KPN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T +I  FC++G  ++A  +F +M E G   +   Y+ LI    +  +  ++ ++ +
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 594

Query: 122 EMCENNISPNIVSYSILI----DGLCKRGLME 149
           EM       +  + S++I    DG  ++  +E
Sbjct: 595 EMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 128/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++PDI TY+++I G+C  +RLDEA  +FE +      PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A  +++
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLCK G +E+AL  F     + + PD+ TY I+I G CKAG
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ ++ +T+
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTM 541



 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    +E D++ Y TII   C+   +++A+ LF ++    ++PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C  GR  DA+ + S M+E+    NVVT+S LID + K   +  A  +Y+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+I +YS LI+G C    ++EA + F   +     P+VVTY  LI+G+CKA 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTL 436



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 120/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ AL LF ++ ++G+ P+++TYN++I   C+  R  +A +L   +   ++ PN +TF+
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDAF KEG++ +A  ++ +M+++    ++ TYS LI+G+     +  A  ++E M   
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN+V+Y+ LI G CK   +EE +  F       L+ + VTY  LI+G  +AG    A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  M+ +G+ PD +  S L D
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLD 473



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 120/209 (57%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A  +F  +  +   P+++TYNT+I G+C   R++E ++LF +++   L  N++T+ 
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    + G  D A  +F KM+  G   +++TYS L+DG  K   ++ A  V+E + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + P+I +Y+I+I+G+CK G +E+  +   C+L    + P+V+ Y  +I G+C+ G   E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDG-WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L+  M  +G +P+    +TL    L+
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLR 582



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  RG +PD+ TY T++ G C    +D A+ L +K+   +++ + + +T +ID
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C    ++DA  +F++M  KG + NVVTY+ LI           A  +  +M E  I+P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V++S LID   K G + EA   +   +   + PD+ TY+ LI G+C   R  EA  ++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+     P+ +  +TL
Sbjct: 384 ELMISKDCFPNVVTYNTL 401



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EPDI+T ++++ GYC   R+ EAV L +++  ++ +PN++
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+ +G + ++ TY  +++G  K  ++  A  + ++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I  ++V Y+ +ID LC    + +AL  F    +  + P+VVTY  LIR  C  GR 
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I P+ +  S L D
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALID 333



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+     +P+ +T+NT+I G    N+  EAV L +++     +P+ 
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  +++  CK G +D A  +  KM +   +A+VV Y+ +ID     +N+  A +++ E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+Y+ LI  LC  G   +A       ++  + P+VVT++ LI  + K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I PD    S+L
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSL 366



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 119/217 (54%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  ++LF +++ RGL  + +TYNT+I G       D A ++F+K+    + P+ I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  CK G+++ A ++F  + +   + ++ TY+ +I+G  K+  ++  +D++  +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN++ Y+ +I G C++GL EEA   F    ++  LP+  TY  LIR   + G  
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
             + +L   M   G + D     ++++ L D  L+ S
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 104/206 (50%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  LD A+ LFG++      P I+ +N ++     +N+ D  + L E++  +++  +  +
Sbjct: 58  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + ILI+ FC+  ++  A  +  KM++ G + ++VT S L++GY   + +  A  + ++M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                PN V+++ LI GL       EA+      +     PD+ TY  ++ G CK G   
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A+ L   M +  I  D ++ +T+ D
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIID 263



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL +F  L    +EPDI TYN +I G C   ++++   LF  L+   +KPN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T +I  FC++G  ++A  +F +M E G   N  TY+ LI    +  +  ++ ++ +
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594

Query: 122 EM 123
           EM
Sbjct: 595 EM 596


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 128/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++PDI TY+++I G+C  +RLDEA  +FE +      PN
Sbjct: 319 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 378

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A  +++
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 438

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLCK G +E+AL  F     + + PD+ TY I+I G CKAG
Sbjct: 439 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ ++ +T+
Sbjct: 499 KVEDGWDLFCSLSLKGVKPNVIIYTTM 525



 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    +E D++ Y TII   C+   +++A+ LF ++    ++PN
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C  GR  DA+ + S M+E+    NVVT+S LID + K   +  A  +Y+
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+I +YS LI+G C    ++EA + F   +     P+VVTY  LI+G+CKA 
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTL 420



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 120/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ AL LF ++ ++G+ P+++TYN++I   C+  R  +A +L   +   ++ PN +TF+
Sbjct: 254 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 313

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDAF KEG++ +A  ++ +M+++    ++ TYS LI+G+     +  A  ++E M   
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN+V+Y+ LI G CK   +EE +  F       L+ + VTY  LI+G  +AG    A
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  M+ +G+ PD +  S L D
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLD 457



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 120/209 (57%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A  +F  +  +   P+++TYNT+I G+C   R++E ++LF +++   L  N++T+ 
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 418

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    + G  D A  +F KM+  G   +++TYS L+DG  K   ++ A  V+E + ++
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + P+I +Y+I+I+G+CK G +E+  +   C+L    + P+V+ Y  +I G+C+ G   E
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDG-WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 537

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L+  M  +G +P+    +TL    L+
Sbjct: 538 ADALFREMKEDGTLPNSGTYNTLIRARLR 566



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  RG +PD+ TY T++ G C    +D A+ L +K+   +++ + + +T +ID
Sbjct: 188 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 247

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C    ++DA  +F++M  KG + NVVTY+ LI           A  +  +M E  I+P
Sbjct: 248 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 307

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V++S LID   K G + EA   +   +   + PD+ TY+ LI G+C   R  EA  ++
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+     P+ +  +TL
Sbjct: 368 ELMISKDCFPNVVTYNTL 385



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EPDI+T ++++ GYC   R+ EAV L +++  ++ +PN++
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+ +G + ++ TY  +++G  K  ++  A  + ++M
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I  ++V Y+ +ID LC    + +AL  F    +  + P+VVTY  LIR  C  GR 
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I P+ +  S L D
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALID 317



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+     +P+ +T+NT+I G    N+  EAV L +++     +P+ 
Sbjct: 145 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 204

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  +++  CK G +D A  +  KM +   +A+VV Y+ +ID     +N+  A +++ E
Sbjct: 205 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 264

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+Y+ LI  LC  G   +A       ++  + P+VVT++ LI  + K G+
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I PD    S+L
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSL 350



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 119/217 (54%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  ++LF +++ RGL  + +TYNT+I G       D A ++F+K+    + P+ I
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  CK G+++ A ++F  + +   + ++ TY+ +I+G  K+  ++  +D++  +
Sbjct: 451 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 510

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN++ Y+ +I G C++GL EEA   F    ++  LP+  TY  LIR   + G  
Sbjct: 511 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 570

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
             + +L   M   G + D     ++++ L D  L+ S
Sbjct: 571 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 607



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 104/206 (50%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  LD A+ LFG++      P I+ +N ++     +N+ D  + L E++  +++  +  +
Sbjct: 42  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + ILI+ FC+  ++  A  +  KM++ G + ++VT S L++GY   + +  A  + ++M 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                PN V+++ LI GL       EA+      +     PD+ TY  ++ G CK G   
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A+ L   M +  I  D ++ +T+ D
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIID 247



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL +F  L    +EPDI TYN +I G C   ++++   LF  L+   +KPN
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 518

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T +I  FC++G  ++A  +F +M E G   N  TY+ LI    +  +  ++ ++ +
Sbjct: 519 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 578

Query: 122 EM 123
           EM
Sbjct: 579 EM 580


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 127/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++PDI TY+++I G+C  +RLDEA  +FE +      PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R+D+   +F +M ++G   N VTY+ LI G+F+++   +A  V++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLC  G +E AL  F     + + PD+ TY I+I G CKAG
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ +  +T+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTM 542



 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    +EP ++ YNTII   C+   +++A+ LF ++    ++PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C  GR  DA+ + S M+E+    NVVT+S LID + K   +  A  +Y+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+I +YS LI+G C    ++EA + F   +     P+VVTY  LI+G+CKA 
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTL 437



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A  +F  +  +   P+++TYNT+I G+C   R+DE ++LF +++   L  N++T+T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F +    D+A ++F +M+  G   +++TYS L+DG   +  +++A  V+E +  +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + P+I +Y+I+I+G+CK G +E+    F C+L    + P+VVTY  ++ G+C+ G   E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L+  M   G +PD    +TL   +L+
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLR 583



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 119/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ AL LF ++ ++G+ P+++TYN++I   C+  R  +A +L   +   ++ PN +TF+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDAF KEG++ +A  ++ +M+++    ++ TYS LI+G+     +  A  ++E M   
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN+V+Y+ LI G CK   ++E +  F       L+ + VTY  LI G+ +A     A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++  M+ +G++PD +  S L D
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLD 474



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L GQ+ + G +PD  T+NT+I G    NR  EAV L +++     +P+ 
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ I+++  CK G +D A  +  KM +   +  VV Y+ +ID     +N+  A +++ E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+Y+ LI  LC  G   +A       ++  + P+VVT++ LI  + K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I PD    S+L
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSL 367



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL +  ++   G EPDI+T N+++ G+C  NR+ +AV L  ++  +  +P+S 
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI    +  R  +A  +  +M+ KG + ++VTY  +++G  K  ++  A  + ++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P +V Y+ +ID LC    + +AL  F    +  + P+VVTY  LIR  C  GR 
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I P+ +  S L D
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALID 334



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +      A+ L  ++  +G +PD++TY  ++ G C    +D A+ L +K+   +++P 
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +IDA C    ++DA  +F++M  KG + NVVTY+ LI           A  +  
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I+PN+V++S LID   K G + EA   +   +   + PD+ TY+ LI G+C   
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  +++ M+     P+ +  +TL
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTL 402



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 115/217 (52%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ RGL  + +TY T+I G+      D A  +F+++    + P+ +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  C  G+++ A ++F  +     + ++ TY+ +I+G  K+  ++  +D++  +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+V+Y+ ++ G C++GL EEA   F    +   LPD  TY  LIR + + G  
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
             + +L   M     + D    GL+ + L D  L  S
Sbjct: 588 AASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKS 624



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L  Q+ + G+  ++ TY+ +I  +C  ++L  A+ +  K+  +  +P+ +T   
Sbjct: 97  FDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ FC   R+ DA  +  +M+E G + +  T++ LI G F+      A  + + M    
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y I+++GLCKRG ++ AL          + P VV Y  +I   C      +A+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276

Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
            L+  M   GI P+ +    L+  L +Y   S  S+
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 106/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + +  LD A+ LFG +      P I+ ++ ++     +N+ D  + L E++  + +  N 
Sbjct: 57  LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ILI+ FC+  ++  A  + +KM++ G + ++VT + L++G+     +  A  +  +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+  +++ LI GL +     EA+      +     PD+VTY I++ G CK G 
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L   M +  I P  ++ +T+ D
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIID 264


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 124/200 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++   ++ +RG+ P++ TYN+I+ G+C+L +L+EA +LF+++    + PN
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TFTIL+D  CKEG + +A ++F  M EKG + ++ TY+ L+DGY   + M  A  V+E
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P   SY+ILI+G CK   M+EA           L PD VTY+ L++G C+ G
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           RP EA+ L+  M   G  P+
Sbjct: 423 RPKEALNLFKEMCSYGPHPN 442



 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 117/199 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A++LF ++  RG EP++I+Y T+I G C       AV +F+K+     KPN
Sbjct: 173 LCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +ID+ CK+  ++DA    S+M+E+G   NV TY+ ++ G+     +  A  +++
Sbjct: 233 VVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFK 292

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ PN V+++IL+DGLCK G++ EA   F    +  + PD+ TY  L+ GYC   
Sbjct: 293 EMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQR 352

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              EA ++++ M+R G  P
Sbjct: 353 LMNEAKKVFEIMIRKGCAP 371



 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 116/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D ++ + G++   G+ PD IT+N +I G C+  ++ EAV+LF ++     +PN I++T
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +F KM + G K NVVTYS +ID   K + +  A +   EM E 
Sbjct: 203 TVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER 262

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN+ +Y+ ++ G C  G + EA   F   +   ++P+ VT+ IL+ G CK G  +EA
Sbjct: 263 GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA 322

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++++M   G+ PD    + L D
Sbjct: 323 RLVFETMTEKGVEPDISTYNALMD 346



 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +T++G+EPDI TYN ++ GYC    ++EA ++FE +      P 
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++ ILI+ +CK  RMD+A  + ++M  K    + VTYS L+ G  +    K A ++++
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC     PN+V+Y IL+DG CK G ++EAL       +  L P++V Y ILI G   AG
Sbjct: 433 EMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAG 492

Query: 182 RPTEAMQLYDSMLRNGIMPD---------GLLLSTLAD 210
           +   A +L+  +  +G  PD         GLL   L+D
Sbjct: 493 KLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSD 530



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 114/185 (61%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           ++ + N +I   C LN +D +V +  K+  + + P++ITF  LI+  C EG++ +A  +F
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           ++M+++G + NV++Y+ +I+G  K+ N   A DV+++M +N   PN+V+YS +ID LCK 
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
            L+ +A+      ++  + P+V TY  ++ G+C  G+  EA +L+  M+   +MP+ +  
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306

Query: 206 STLAD 210
           + L D
Sbjct: 307 TILVD 311



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 112/191 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  ++  + L PD +TY+T++ G C L R  EA+ LF+++      PN +
Sbjct: 385 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLV 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D FCK G +D+A  +   M EK  + N+V Y+ LI+G F +  ++ A +++ ++
Sbjct: 445 TYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKL 504

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   P+I +Y+++I GL K GL +EA   F    D+  LP+  +Y ++I+G+ +    
Sbjct: 505 FGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 564

Query: 184 TEAMQLYDSML 194
           + A++L D M+
Sbjct: 565 STAIRLIDEMV 575



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 113/211 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+F  +  +G  P   +YN +I GYC   R+DEA  L  ++    L P+++T++ 
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C+ GR  +A  +F +M   GP  N+VTY  L+DG+ K  ++  A  + + M E  
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK 473

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PNIV Y+ILI+G+   G +E A   F     +   PD+ TY ++I+G  K G   EA 
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY 533

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            L+  M  +G +P+    + +    LQ+  S
Sbjct: 534 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 564



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 94/194 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  F ++      P ++ +   +  +    +    V L  ++   ++  N  +  I
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  C+   +D +  +  KM + G   + +T++ LI+G      +K A +++ EM +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN++SY+ +I+GLCK G    A+  F     N   P+VVTY+ +I   CK     +AM
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 188 QLYDSMLRNGIMPD 201
           +    M+  GI P+
Sbjct: 254 EFLSEMVERGIPPN 267



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 78/137 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  HLD ALKL   + ++ LEP+I+ Y  +I G     +L+ A +LF KL     +P+  
Sbjct: 455 KHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIR 514

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++I    KEG  D+A  +F KM + G   N  +Y+ +I G+ ++Q+  +A  + +EM
Sbjct: 515 TYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574

Query: 124 CENNISPNIVSYSILID 140
                S N+ ++ +L+D
Sbjct: 575 VGKRFSVNLSTFQMLLD 591



 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE   D A  LF ++ D G  P+  +YN +I G+        A++L +++   +   N
Sbjct: 523 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVN 582

Query: 62  SITFTILID 70
             TF +L+D
Sbjct: 583 LSTFQMLLD 591


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 128/205 (62%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A KLF ++  R ++P+I+TYN++I G+C  +RLDEA Q+F  +      P+ +
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A  ++++M
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+I++YSIL+DGLCK G +E+AL  F     + + P++ TY I+I G CKAG+ 
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +   L+ S+   G+ P+ ++ +T+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVIIYTTM 542



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    +E +++ YNTII G C    +D+A  LF K+    +KP+
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 290

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C  GR  DA+ + S M+E+    NVVT++ LID + K   +  A  +++
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I PNIV+Y+ LI+G C    ++EA   F   +    LPDVVTY  LI+G+CKA 
Sbjct: 351 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAK 410

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 411 RVEEGMELFREMSQRGLVGNTVTYNTL 437



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 119/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A  LF ++  +G++PD+ TYN++I   C+  R  +A +L   +   ++ PN
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPN 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG++ +A  +F +M+++    N+VTY+ LI+G+     +  A  ++ 
Sbjct: 326 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++V+Y+ LI G CK   +EE +  F       L+ + VTY  LI+G  +AG
Sbjct: 386 LMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 445

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ PD +  S L D
Sbjct: 446 DCDMAQKIFKKMVSDGVPPDIITYSILLD 474



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 121/209 (57%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   PD++TYNT+I G+C   R++E ++LF +++   L  N++T+ 
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    + G  D A  +F KM+  G   +++TYS L+DG  K   ++ A  V+E + ++
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + PNI +Y+I+I+G+CK G +E+  +   C+L    + P+V+ Y  +I G+C+ G   E
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDG-WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L+  M  +G +PD    +TL    L+
Sbjct: 555 ADALFREMKEDGTLPDSGCYNTLIRARLR 583



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 115/206 (55%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD +T+NT+I G    N+  EAV L +++     +P+ 
Sbjct: 162 CHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 221

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  +++  CK G +D A  +  KM +   +ANVV Y+ +IDG  K ++M  AFD++ +
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++ +Y+ LI  LC  G   +A       ++  + P+VVT+  LI  + K G+
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +L+D M++  I P+ +  ++L
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSL 367



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EPDI+T ++++ GYC   R+ EAV L +++  +  KP+++
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+ +G + ++ TY  +++G  K  ++  A  + ++M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I  N+V Y+ +IDGLCK   M++A   F+      + PDV TY  LI   C  GR 
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I P+ +  ++L D
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLID 334



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 118/217 (54%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  ++LF +++ RGL  + +TYNT+I G       D A ++F+K+    + P+ I
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  CK G+++ A ++F  + +   + N+ TY+ +I+G  K+  ++  +D++  +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN++ Y+ +I G C++GL EEA   F    ++  LPD   Y  LIR   + G  
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
             + +L   M   G + D     ++++ L D  L+ S
Sbjct: 588 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 624



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 106/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  LD A+ LFG++      P II ++ ++     +N+ D  + L E++  + +  N 
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++IL++ FC+  ++  A  +  KM++ G + ++VT S L++GY   + +  A  + ++
Sbjct: 117 YTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+ V+++ LI GL       EA+      +     PD+ TY  ++ G CK G 
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L   M +  I  + ++ +T+ D
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIID 264



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL +F  L    +EP+I TYN +I G C   ++++   LF  L+   +KPN
Sbjct: 476 LCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T +I  FC++G  ++A  +F +M E G   +   Y+ LI    +  +  ++ ++ +
Sbjct: 536 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 595

Query: 122 EMCENNISPNIVSYSILI----DGLCKRGLME 149
           EM       +  + S++I    DG  ++  +E
Sbjct: 596 EMRSCGFVGDASTISMVINMLHDGRLEKSYLE 627


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 132/206 (64%), Gaps = 6/206 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ ++  +G+ PD++TY+ +I G+C L +L++A+ LF K+   ++ P+  TF+I
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCKEGR+ +A  + + M+++G K +VVTY  L+DGY   + +  A  ++  M +  
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ N+ SY+I+I+G CK   ++EA+  F   HC    +++PDVVTY  LI G CK+G+ +
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHC---KNIIPDVVTYNSLIDGLCKSGKIS 388

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A++L D M   G+  D +  +++ D
Sbjct: 389 YALKLVDEMHDRGVPHDKITYNSILD 414



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   +  +F  +  +G EP+ IT  T+I G C   ++ +A+   +K+  +    N + + 
Sbjct: 106 HTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYG 165

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G+   A  +  ++  K  + NVV Y+ +ID   K + +  AFD+Y EM   
Sbjct: 166 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 225

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP++V+YS LI G C  G + +A+  F+  +   + PDV T++IL+ G+CK GR  EA
Sbjct: 226 GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA 285

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +   M++ GI PD +   +L D
Sbjct: 286 KNVLAMMMKQGIKPDVVTYCSLMD 309



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 114/201 (56%), Gaps = 2/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+  ++ A  +F  +   G+  ++ +YN +I G+C + ++DEA+ LF+++ C  + P+
Sbjct: 313 LVKQ--VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G++  A  +  +M ++G   + +TY+ ++D   K+  +  A  +  
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I P++ +Y+ILIDGLCK G +++A   F   L       V TY ++I+G+C   
Sbjct: 431 KMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDND 490

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
              +A+ L   M  NG +P+ 
Sbjct: 491 LFDKALALLSKMEDNGCIPNA 511



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    ++   G   + + Y T+I G C + +   A+QL  ++    ++PN + + 
Sbjct: 141 QIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 200

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK   +++A  ++S+M+ KG   +VVTYS LI G+     +  A  ++ +M   
Sbjct: 201 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE 260

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+P++ ++SIL+DG CK G ++EA       +   + PDVVTY  L+ GYC   +  +A
Sbjct: 261 EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKA 320

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             ++++M + G+       + +  YN+  +G
Sbjct: 321 KSIFNTMAQGGVT------ANVQSYNIMING 345



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 111/194 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +  +G++PD++TY +++ GYC + ++++A  +F  +    +  N  
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ I+I+ FCK  ++D+A  +F +M  K    +VVTY+ LIDG  KS  +  A  + +EM
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +  + ++Y+ ++D LCK   +++A+       D  + PD+ TY ILI G CK GR 
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL 457

Query: 184 TEAMQLYDSMLRNG 197
            +A  +++ +L  G
Sbjct: 458 KDAQNIFEDLLVKG 471



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 100/201 (49%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A+ L  ++   G+  D++T+N +I  +  L     +  +F  +     +PN+IT T LI
Sbjct: 74  TAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLI 133

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C +G++  A     K++  G   N V Y  LI+G  K     +A  +   +    + 
Sbjct: 134 KGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQ 193

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V Y+ +ID +CK  L+ EA   +   +   + PDVVTY+ LI G+C  G+  +A+ L
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           ++ M+   I PD    S L D
Sbjct: 254 FNKMISEEINPDVYTFSILVD 274



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 107/192 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  + + PD++TYN++I G C   ++  A++L +++    +  + IT+  
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK  ++D A  + +KM ++G + ++ TY+ LIDG  K   +K A +++E++    
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +  + +Y+++I G C   L ++AL       DN  +P+  TY I+I    +      A 
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAE 531

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 532 KLLREMIARGLL 543



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 81/144 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  ALKL  ++ DRG+  D ITYN+I+   C  +++D+A+ L  K+    ++P+
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILID  CK GR+ DA  +F  +L KG    V TY+ +I G+  +     A  +  
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M +N   PN  +Y I+I  L ++
Sbjct: 501 KMEDNGCIPNAKTYEIIILSLFEK 524



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 87/194 (44%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F ++ +    P I  +  I+     +N    A+ L  ++    +  + +TF ILI+ F +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G    +  +F+ +L+KG + N +T + LI G      +  A   ++++       N V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y  LI+GLCK G    AL          + P+VV Y  +I   CK     EA  LY  M+
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 195 RNGIMPDGLLLSTL 208
             GI PD +  S L
Sbjct: 224 SKGISPDVVTYSAL 237



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++ D G++PD+ TY  +I G C   RL +A  +FE L        
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNIT 475

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T++I  FC     D A  + SKM + G   N  TY  +I   F+      A  +  
Sbjct: 476 VYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLR 535

Query: 122 EM 123
           EM
Sbjct: 536 EM 537



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 47  VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
           V  F ++  +   P    F  ++ +  K      A  +  +M   G  +++VT++ LI+ 
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH---CALDNHL 163
           + +  +   +F V+  + +    PN ++ + LI GLC +G + +AL+ FH    AL  HL
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALH-FHDKVVALGFHL 159

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             + V Y  LI G CK G+ + A+QL   +    + P+ ++ +T+ D
Sbjct: 160 --NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID 204



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 51/111 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +F  L  +G    + TY  +I G+C  +  D+A+ L  K+      PN
Sbjct: 451 LCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
           + T+ I+I +  ++   D A  +  +M+ +G         CL   +F+ ++
Sbjct: 511 AKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQRRS 561


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 123/207 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A K+F ++   GL PD+++YNT++ GYC +  L E++ +F ++T   L P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI A CK G ++ A  + ++M E+G + N VT++ LIDG+ K   +  A    E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I P++V Y+ LI+G CK G M+ A           + PDVVTY+ +I GYCK G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A QL   ML+ G++PD +  S+L
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSL 439



 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 122/203 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  +L +F ++T RGL PD++T+ ++I   C    L++AV L  ++    L+ N +TFT 
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK+G +DDA +   +M + G + +VV Y+ LI+GY K   M  A ++  EM    
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS +I G CK G ++ A       L   +LPD +TY+ LIRG C+  R  +A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+++ML+ G+ PD    +TL D
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLID 476



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 127/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A+ L  Q+ +RGL  + +T+  +I G+C    LD+A+   E++    ++P+ +
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI+ +CK GRMD A  +  +M  K  K +VVTYS +I GY K  N+ SAF + ++M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ ++YS LI GLC+   + +A   F   L   + PD  TY  LI G+CK G  
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A+ L+D M+R G++PD +  S L +   +S+ ++E
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 117/200 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL    ++   G++P ++ YN +I GYC L R+D A +L  ++   ++KP+ +
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +I  +CK G +D A  +  KML+KG   + +TYS LI G  + + +  A +++E M
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+  +Y+ LIDG CK G +E+AL      +   +LPDVVTY++LI G  K+ R 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            EA +L   +     +PD +
Sbjct: 520 KEAHRLLFKLYHEDPVPDNI 539



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 1/211 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + + +  L +A +    +   G+ P++ TYN ++   C+  RL+EAV +   +      P
Sbjct: 126 LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAP 185

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDV 119
           N++T+  L+ AFC+ G +D A  + S M E+G  K N+VT++ +++G  K+  M+ A  V
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    ++P++VSY+ L+ G CK G + E+L  F       L+PDVVT+  LI   CK
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 305

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AG   +A+ L   M   G+  + +  + L D
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALID 336



 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 15/213 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +LD+A +L  ++  +G+ PD ITY+++I G C   RL++A +LFE +  + ++P+  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG ++ A  +  +M+ KG   +VVTYS LI+G  KS   K A  +  ++
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 124 CENNISPNIVSYS---------------ILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
              +  P+ + Y                 L+ G C +GLM+EA   +   LD +   D  
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            Y+ILI G+C+ G   +A+  +  MLR+G  P+
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 123/207 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A K+F ++   GL PD+++YNT++ GYC +  L E++ +F ++T   L P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI A CK G ++ A  + ++M E+G + N VT++ LIDG+ K   +  A    E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I P++V Y+ LI+G CK G M+ A           + PDVVTY+ +I GYCK G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A QL   ML+ G++PD +  S+L
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSL 439



 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 122/203 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  +L +F ++T RGL PD++T+ ++I   C    L++AV L  ++    L+ N +TFT 
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK+G +DDA +   +M + G + +VV Y+ LI+GY K   M  A ++  EM    
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS +I G CK G ++ A       L   +LPD +TY+ LIRG C+  R  +A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+++ML+ G+ PD    +TL D
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLID 476



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 127/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A+ L  Q+ +RGL  + +T+  +I G+C    LD+A+   E++    ++P+ +
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI+ +CK GRMD A  +  +M  K  K +VVTYS +I GY K  N+ SAF + ++M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ ++YS LI GLC+   + +A   F   L   + PD  TY  LI G+CK G  
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A+ L+D M+R G++PD +  S L +   +S+ ++E
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 117/200 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL    ++   G++P ++ YN +I GYC L R+D A +L  ++   ++KP+ +
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +I  +CK G +D A  +  KML+KG   + +TYS LI G  + + +  A +++E M
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+  +Y+ LIDG CK G +E+AL      +   +LPDVVTY++LI G  K+ R 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            EA +L   +     +PD +
Sbjct: 520 KEAHRLLFKLYHEDPVPDNI 539



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 1/211 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + + +  L +A +    +   G+ P++ TYN ++   C+  RL+EAV +   +      P
Sbjct: 126 LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAP 185

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDV 119
           N++T+  L+ AFC+ G +D A  + S M E+G  K N+VT++ +++G  K+  M+ A  V
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    ++P++VSY+ L+ G CK G + E+L  F       L+PDVVT+  LI   CK
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 305

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AG   +A+ L   M   G+  + +  + L D
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALID 336



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 15/213 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +LD+A +L  ++  +G+ PD ITY+++I G C   RL++A +LFE +  + ++P+  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG ++ A  +  +M+ KG   +VVTYS LI+G  KS   K A  +  ++
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 124 CENNISPNIVSYS---------------ILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
              +  P+ + Y                 L+ G C +GLM+EA   +   LD +   D  
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            Y+ILI G+C+ G   +A+  +  MLR+G  P+
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 15/212 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++ AL L  ++  +G+ PD++TY+ +I G     R  EA +L  KL      P++I
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539

Query: 64  TF---------------TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            +                 L+  FC +G M +A  ++  ML++  K +   YS LI G+ 
Sbjct: 540 KYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHC 599

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +  N++ A   +++M  +  SPN  S   L+ GL + G++ EA  A    L    L D  
Sbjct: 600 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAE 659

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
               LI    K G     + +   M R+G++P
Sbjct: 660 ASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691



 Score = 43.5 bits (101), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 53/119 (44%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++  + DR  + D   Y+ +I G+C    + +A+   +++      PNS +   L+   
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
            +EG + +A      +L   P A+      LID   K  N+ +  DV   M  + + P+
Sbjct: 634 FEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 123/207 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A K+F ++   GL PD+++YNT++ GYC +  L E++ +F ++T   L P+
Sbjct: 91  LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 150

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI A CK G ++ A  + ++M E+G + N VT++ LIDG+ K   +  A    E
Sbjct: 151 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 210

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I P++V Y+ LI+G CK G M+ A           + PDVVTY+ +I GYCK G
Sbjct: 211 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 270

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A QL   ML+ G++PD +  S+L
Sbjct: 271 NLDSAFQLNQKMLKKGVLPDAITYSSL 297



 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 122/203 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  +L +F ++T RGL PD++T+ ++I   C    L++AV L  ++    L+ N +TFT 
Sbjct: 132 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 191

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK+G +DDA +   +M + G + +VV Y+ LI+GY K   M  A ++  EM    
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS +I G CK G ++ A       L   +LPD +TY+ LIRG C+  R  +A 
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+++ML+ G+ PD    +TL D
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLID 334



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 127/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A+ L  Q+ +RGL  + +T+  +I G+C    LD+A+   E++    ++P+ +
Sbjct: 163 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 222

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI+ +CK GRMD A  +  +M  K  K +VVTYS +I GY K  N+ SAF + ++M
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ ++YS LI GLC+   + +A   F   L   + PD  TY  LI G+CK G  
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A+ L+D M+R G++PD +  S L +   +S+ ++E
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379



 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 117/200 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL    ++   G++P ++ YN +I GYC L R+D A +L  ++   ++KP+ +
Sbjct: 198 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 257

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +I  +CK G +D A  +  KML+KG   + +TYS LI G  + + +  A +++E M
Sbjct: 258 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+  +Y+ LIDG CK G +E+AL      +   +LPDVVTY++LI G  K+ R 
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 377

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            EA +L   +     +PD +
Sbjct: 378 KEAHRLLFKLYHEDPVPDNI 397



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 110/194 (56%), Gaps = 1/194 (0%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +   G+ P++ TYN ++   C+  RL+EAV +   +      PN++T+  L+ AFC+ G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 78  MDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           +D A  + S M E+G  K N+VT++ +++G  K+  M+ A  V++EM    ++P++VSY+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L+ G CK G + E+L  F       L+PDVVT+  LI   CKAG   +A+ L   M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 197 GIMPDGLLLSTLAD 210
           G+  + +  + L D
Sbjct: 181 GLRMNEVTFTALID 194



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 116/210 (55%), Gaps = 15/210 (7%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD+A +L  ++  +G+ PD ITY+++I G C   RL++A +LFE +  + ++P+  T+T
Sbjct: 271 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 330

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CKEG ++ A  +  +M+ KG   +VVTYS LI+G  KS   K A  +  ++   
Sbjct: 331 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE 390

Query: 127 NISPNIVSYS---------------ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           +  P+ + Y                 L+ G C +GLM+EA   +   LD +   D   Y+
Sbjct: 391 DPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYS 450

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ILI G+C+ G   +A+  +  MLR+G  P+
Sbjct: 451 ILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 106/195 (54%), Gaps = 1/195 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKPNSITF 65
            L+ A+ + G +   G  P+ +TYNT++  +C    LD A ++   +      KPN +TF
Sbjct: 25  RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTF 84

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++  CK GRM+ A  +F +M+ +G   +VV+Y+ L+ GY K   +  +  V+ EM +
Sbjct: 85  NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 144

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P++V+++ LI   CK G +E+A+       +  L  + VT+  LI G+CK G   +
Sbjct: 145 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 204

Query: 186 AMQLYDSMLRNGIMP 200
           A+   + M + GI P
Sbjct: 205 ALLAVEEMRKCGIQP 219



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 15/212 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++ AL L  ++  +G+ PD++TY+ +I G     R  EA +L  KL      P++I
Sbjct: 338 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 397

Query: 64  TF---------------TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            +                 L+  FC +G M +A  ++  ML++  K +   YS LI G+ 
Sbjct: 398 KYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHC 457

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +  N++ A   +++M  +  SPN  S   L+ GL + G++ EA  A    L    L D  
Sbjct: 458 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAE 517

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
               LI    K G     + +   M R+G++P
Sbjct: 518 ASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score = 43.1 bits (100), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 55/124 (44%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A K++  + DR  + D   Y+ +I G+C    + +A+   +++      PNS +   
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 486

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+    +EG + +A      +L   P A+      LID   K  N+ +  DV   M  + 
Sbjct: 487 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDG 546

Query: 128 ISPN 131
           + P+
Sbjct: 547 LLPS 550


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 130/207 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++PDI TY+++I G+C  +RLDEA  +FE +      PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI  FCK  R+++   +F +M ++G   N VTY+ LI G+F++++  +A  V++
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PNI++Y+IL+DGLCK G + +A+  F     + + PD+ TY I+I G CKAG
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +  +L+ ++   G+ P+ +  +T+
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTM 544



 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    +E D++ YNTII G C    +D+A+ LF ++    ++P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LI   C  GR  DA+ + S M+E+    NVVT+S LID + K   +  A  +Y+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+I +YS LI+G C    ++EA + F   +     P+VVTY+ LI+G+CKA 
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTL 439



 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++ ++G+ PD+ TY+++I   C+  R  +A +L   +   ++ PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LIDAF KEG++ +A  ++ +M+++    ++ TYS LI+G+     +  A  ++E
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  PN+V+YS LI G CK   +EE +  F       L+ + VTY  LI G+ +A 
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  ++  M+  G+ P+ L  + L D
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLD 476



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD  T+ T+I G    N+  EAV L +++     +P+ 
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +++  CK G +D A  +  KM +   +A+VV Y+ +IDG  K ++M  A +++ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++ +YS LI  LC  G   +A       ++  + P+VVT++ LI  + K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I PD    S+L
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSL 369



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL +  ++   G EPDI+T ++++ GYC   R+ +AV L +++  +  KP++ 
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI       +  +A  +  +M+++G + ++VTY  +++G  K  ++  A  + ++M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I  ++V Y+ +IDGLCK   M++AL  F    +  + PDV TY+ LI   C  GR 
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I P+ +  S L D
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALID 336



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  ++LF +++ RGL  + +TY T+I G+      D A  +F+++  V + PN +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  CK G++  A ++F  +     + ++ TY+ +I+G  K+  ++  ++++  +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +SPN+++Y+ +I G C++G  EEA        ++  LP+  TY  LIR   + G  
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
             + +L   M   G   D    GL+ + L D  L  S
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 104/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LFG +      P I+ +N ++     +N+ +  + L E++  + +  +  T++I
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I+ FC+  ++  A  + +KM++ G + ++VT S L++GY  S+ +  A  + ++M E  
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +++ LI GL       EA+      +     PD+VTY  ++ G CK G    A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M +  I  D ++ +T+ D
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIID 266



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 66/122 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ +F  L    +EPDI TYN +I G C   ++++  +LF  L+   + PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +  +I  FC++G  ++A  +  KM E GP  N  TY+ LI    +  + +++ ++ +
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597

Query: 122 EM 123
           EM
Sbjct: 598 EM 599



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 80/169 (47%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           ++D+AV LF  +   +  P+ + F  L+ A  K  + +    +  +M   G   ++ TYS
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
             I+ + +   +  A  V  +M +    P+IV+ S L++G C    + +A+      ++ 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              PD  T+  LI G     + +EA+ L D M++ G  PD +   T+ +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 128/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++P I+TY+++I G+C  +RLDEA Q+FE +      P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++++ LI  FCK  R+D+   +F +M ++G   N VTY+ LI G F++ +   A ++++
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + PNI++Y+ L+DGLCK G +E+A+  F     + + P + TY I+I G CKAG
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ ++   G+ PD +  +T+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTM 542



 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A  L  ++    LEP ++ Y TII G C    +D+A+ LF+++    ++PN
Sbjct: 231 LCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPN 290

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+E+    +V T+S LID + K   +  A  +Y+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+IV+YS LI+G C    ++EA   F   +  H  PDVV+Y+ LI+G+CKA 
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAK 410

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+L+  M + G++ + +  +TL
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTL 437



 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   C+  R  +A +L   +   ++ P+
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+ LIDAF KEG++ +A  ++ +M+++    ++VTYS LI+G+     +  A  ++E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++VSYS LI G CK   ++E +  F       L+ + VTY  LI+G  +AG
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAG 445

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ P+ +  +TL D
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EP+I+T ++++ GYC   R+ EAV L +++     +PN++
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+ KG + ++VTY  +++G  K  +   AF +  +M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P ++ Y+ +IDGLCK   M++AL  F       + P+VVTY+ LI   C  GR 
Sbjct: 248 EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I PD    S L D
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALID 334



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+   G +P+ +T+NT+I G    N+  EAV L +++     +P+ 
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDL 221

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G  D A ++ +KM +   +  V+ Y+ +IDG  K+++M  A ++++E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + PDV T++ LI  + K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I P  +  S+L
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSL 367



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  +G +PD++TY  ++ G C     D A  L  K+   +L+P  + +T +ID
Sbjct: 205 AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIID 264

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   MDDA  +F +M  KG + NVVTYS LI           A  +  +M E  I+P
Sbjct: 265 GLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ ++S LID   K G + EA   +   +   + P +VTY+ LI G+C   R  EA Q++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+     PD +  STL
Sbjct: 385 EFMVSKHCFPDVVSYSTL 402



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  LD A+ LFG++      P II ++ ++     +N+ D  + L E++  + +  N 
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNH 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ILI+ FC+  ++  A  +  KM++ G + N+VT S L++GY  S+ +  A  + ++
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      PN V+++ LI GL       EA+      +     PD+VTY +++ G CK G 
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L + M +  + P  L+ +T+ D
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIID 264



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 111/217 (51%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ RGL  + +TY T+I G       D A ++F+++    + PN +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+D  CK G+++ A ++F  +     +  + TY+ +I+G  K+  ++  +D++  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V+Y+ +I G C++G  EEA   F    ++  LP+   Y  LIR   + G  
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
             + +L   M   G   D    GL+ + L D  L  S
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 4/222 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K    D  + L  Q+ + G+  +  TY+ +I  +C  ++L  A+ +  K+  +  +PN
Sbjct: 91  IAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 150

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + L++ +C   R+ +A  +  +M   G + N VT++ LI G F       A  + +
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALID 210

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y ++++GLCKRG  + A    +      L P V+ Y  +I G CK  
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNK 270

Query: 182 RPTEAMQLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
              +A+ L+  M   GI P+ +    L+S L +Y   S  S+
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ +F  L    +EP I TYN +I G C   ++++   LF  L+   +KP+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  FC++G  ++A  +F +M E G   N   Y+ LI    +  + +++ ++ +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595

Query: 122 EM 123
           EM
Sbjct: 596 EM 597


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 129/206 (62%), Gaps = 6/206 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ ++   G+ PD++TY+ +I G+  + +L +A+ LF K+    +KP+  TF I
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCK+G+M +   +F+ M+++G K NVVTY  L+DGY   + +  A  ++  M +  
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++P+  SY+I+I+G CK   ++EA+  F   HC    +++P+VVTY  LI G CK+G+ +
Sbjct: 314 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCK---NIIPNVVTYTSLIDGLCKSGKIS 370

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A++L D M   G+ PD +  S++ D
Sbjct: 371 YALKLVDEMHDRGVPPDIITYSSILD 396



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 115/204 (56%), Gaps = 13/204 (6%)

Query: 11  ALKLFGQLTDRGLEPDIIT-------------YNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +  +F  +  +G +P++IT             Y T+I G C + +   A+QL  ++    
Sbjct: 114 SFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKL 173

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           ++PN + +  +ID+ CK   +++A  ++S+M+ +G   +VVTYS LI G+F    +K A 
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           D++ +M   NI P++ +++IL+DG CK G M+E    F   +   + P+VVTY  L+ GY
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           C   +  +A  ++++M + G+ PD
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPD 317



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 8/201 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +F  +   G+ PD  +YN +I G+C + ++DEA+ LF+K+ C  + PN +T+T
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF--------D 118
            LID  CK G++  A  +  +M ++G   +++TYS ++D   K+  +  A          
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+E++     + ++ +Y+++I G C +GL  EAL       DN  +PD  TY I+I    
Sbjct: 418 VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLF 477

Query: 179 KAGRPTEAMQLYDSMLRNGIM 199
           K      A +L   M+  G++
Sbjct: 478 KKDENDMAEKLLREMIARGLL 498



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 13/206 (6%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  +   P I  +  I+     +N    A+ L  ++    +  N +T  ILI+ F + G+
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 78  MDDATMMFSKMLEKGPKANVVTYS-------------CLIDGYFKSQNMKSAFDVYEEMC 124
              +  +F+ +L+KG   NV+T +              LI+G  K    ++A  +   + 
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              + PN+V Y+ +ID +CK  L+ EA   +   +   + PDVVTY+ LI G+   G+  
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +A+ L++ M+   I PD    + L D
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVD 256



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 14/140 (10%)

Query: 85  FSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           F+++L +K P   +  +  ++    K     +A  ++ +M    I+ N+V+ +ILI+   
Sbjct: 47  FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIR-------------GYCKAGRPTEAMQLY 190
           + G    +   F   L     P+V+T   LI+             G CK G+   A+QL 
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             +    + P+ ++ +T+ D
Sbjct: 167 RRVDGKLVQPNVVMYNTIID 186


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 121/200 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF    + G+ PD+ +YN +I GYC  NR+DEA+ LF K+   +L PN +T++ LID
Sbjct: 342 ARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLID 401

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+  A  +FS + + GP  NV+TY+ ++D   K Q +  A +++  M E  ++P
Sbjct: 402 GLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTP 461

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ SY+ILI+G CK   ++EA+  F      +L+PD VTY  LI G CK+GR + A +L+
Sbjct: 462 NVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF 521

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M   G   D +  + L D
Sbjct: 522 NVMHDGGPPVDVITYNILFD 541



 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 132/220 (60%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  +   + +RG  PD++T+NT++ GYC  N + EA +LF+      + P+
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI  +CK  R+D+A  +F+KM  K    N+VTYS LIDG  KS  +  A++++ 
Sbjct: 358 VWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + +   SPN+++Y+I++D LCK  L+++A+  F+   +  L P+V +Y ILI GYCK+ 
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSK 477

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           R  EAM L++ M R  ++PD +  + L D  L  SG   H
Sbjct: 478 RIDEAMNLFEEMHRRNLVPDSVTYNCLID-GLCKSGRISH 516



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 119/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  L+  +  RG++PD+ TY  +I G+C L +  E  +L   +    +  N
Sbjct: 228 LCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN 287

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILIDA CK+G +  A  M + M+E+G + ++VT++ L+ GY    ++  A  +++
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFD 347

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              E  I+P++ SY+ILI G CK   ++EAL  F+      L P++VTY+ LI G CK+G
Sbjct: 348 TFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSG 407

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R + A +L+ ++   G  P+ +  + + D
Sbjct: 408 RISYAWELFSAIHDGGPSPNVITYNIMLD 436



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 35/235 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+    +  +G   D +TY T+I G C +    EA +L  K+    ++PN + + +++D
Sbjct: 167 ALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVD 226

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G + +A  ++S ++ +G   +V TY+CLI G+      +    +  +M + N++ 
Sbjct: 227 GLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 131 NIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL----------- 164
           N+ +Y+ILID LCK+G++ +A               L  F+  +  + L           
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 165 ---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                    PDV +Y ILI GYCK  R  EA+ L++ M    + P+ +  S+L D
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLID 401



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 96/188 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K  H   A+ L  Q+  RG+ P I+T + +I  YC L  +  A  +   +     + N
Sbjct: 88  IVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLN 147

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT T ++   C  G +  A      ++ +G   + VTY  LI+G  K    + AF++  
Sbjct: 148 AITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLH 207

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN+V Y++++DGLCK GL+ EA   +   +   + PDV TY  LI G+C  G
Sbjct: 208 KMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLG 267

Query: 182 RPTEAMQL 189
           +  E  +L
Sbjct: 268 QWREVTRL 275



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 99/194 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L      P ++ +N I+     +     A+ L +++    + P+ +T +I
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ +C  G M  A  +   +L++G + N +T + ++ G   +  ++ A + ++ +    
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              + V+Y  LI+GLCK GL  EA    H      + P+VV Y +++ G CK G  TEA 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 188 QLYDSMLRNGIMPD 201
            LY  ++  GI PD
Sbjct: 239 DLYSDVVGRGIDPD 252



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 70/106 (66%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++LF  + +RGL P++ +YN +I GYC   R+DEA+ LFE++    L P+S+T+  
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           LID  CK GR+  A  +F+ M + GP  +V+TY+ L D + K Q++
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 82/143 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +LF  + D G  P++ITYN ++   C +  +D+A++LF  +    L PN
Sbjct: 403 LCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +CK  R+D+A  +F +M  +    + VTY+CLIDG  KS  +  A++++ 
Sbjct: 463 VSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFN 522

Query: 122 EMCENNISPNIVSYSILIDGLCK 144
            M +     ++++Y+IL D   K
Sbjct: 523 VMHDGGPPVDVITYNILFDAFSK 545



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 98/202 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A  + G +  RG + + IT  TI+ G C    + +A++  + +       + +T+ 
Sbjct: 128 HMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYG 187

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G   +A  +  KM  +  + NVV Y+ ++DG  K   +  A D+Y ++   
Sbjct: 188 TLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGR 247

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++ +Y+ LI G C  G   E        +D ++  +V TY ILI   CK G   +A
Sbjct: 248 GIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKA 307

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             + + M+  G  PD +  +TL
Sbjct: 308 HDMRNLMIERGQRPDLVTFNTL 329



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 81/172 (47%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
             + +D+AV LF +L  +   P+ + F +++ +  K      A  +  +M  +G   ++V
Sbjct: 55  GFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIV 114

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T S LI+ Y    +M  AF V   + +     N ++ + ++ GLC  G + +AL      
Sbjct: 115 TLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSV 174

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +    L D VTY  LI G CK G   EA +L   M    + P+ ++ + + D
Sbjct: 175 VAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVD 226


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 125/205 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A KLF ++  R ++P+I+TYN++I G+C  +RLDEA Q+F  +      P+ +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK  ++ D   +F  M  +G   N VTY+ LI G+F++ +  +A  V+++M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PNI++Y+ L+DGLCK G +E+A+  F     + + PD+ TY I+  G CKAG+ 
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +   L+ S+   G+ PD +  +T+
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTM 526



 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 121/215 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL L  ++    +E D++ Y+T+I   C    +D+A+ LF ++    ++P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LI   C  GR  DA+ + S MLE+    NVVT++ LID + K   +  A  +++
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I PNIV+Y+ LI+G C    ++EA   F   +    LPDVVTY  LI G+CKA 
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +  + M+L+  M R G++ + +  +TL     Q+S
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 123/209 (58%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   PD++TYNT+I G+C   ++ + ++LF  ++   L  N++T+T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F +    D+A M+F +M+  G   N++TY+ L+DG  K+  ++ A  V+E + ++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            + P+I +Y+I+ +G+CK G +E+    F C+L    + PDV+ Y  +I G+CK G   E
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L+  M  +G +PD    +TL   +L+
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 119/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++ ++G+ PD+ TY+++I   C+  R  +A +L   +   ++ PN
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG++ +A  +F +M+++    N+VTY+ LI+G+     +  A  ++ 
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++V+Y+ LI+G CK   + + +  F       L+ + VTY  LI G+ +A 
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  ++  M+ +G+ P+ +  +TL D
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL + G++   G  P I+T N+++ G+C  NR+ EAV L +++  +  +P+
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TFT L+    +  +  +A  +  +M+ KG + ++VTY  +I+G  K      A ++  
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I  ++V YS +ID LCK   +++AL  F    +  + PDV TY+ LI   C  G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R ++A +L   ML   I P+ +  ++L D
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLID 318



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 3/199 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD +T+ T++ G    N+  EAV L E++     +P+ 
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +I+  CK G  D A  + +KM +   +A+VV YS +ID   K +++  A +++ E
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++ +YS LI  LC  G   +A       L+  + P+VVT+  LI  + K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA +L+D M++  I P+
Sbjct: 326 LIEAEKLFDEMIQRSIDPN 344



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 102/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LFG++      P I+ ++ ++     + + D  +   EK+  + +  N  T+ I
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  C+  ++  A  +  KM++ G   ++VT + L++G+     +  A  + ++M E  
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V+++ L+ GL +     EA+      +     PD+VTY  +I G CK G P  A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M +  I  D ++ ST+ D
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVID 248



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 4/202 (1%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+  ++ TYN +I   C  ++L  A+ +  K+  +   P+ +T   L++ FC   R+ +A
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  +M+E G + + VT++ L+ G F+      A  + E M      P++V+Y  +I+G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCKRG  + AL   +      +  DVV Y+ +I   CK     +A+ L+  M   GI PD
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274

Query: 202 GL----LLSTLADYNLQSSGSQ 219
                 L+S L +Y   S  S+
Sbjct: 275 VFTYSSLISCLCNYGRWSDASR 296



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 4/152 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ +F  L    +EPDI TYN +  G C   ++++   LF  L+   +KP+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +  +I  FCK+G  ++A  +F KM E GP  +  TY+ LI  + +  +  ++ ++ +
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579

Query: 122 EMCENNISPNIVSYSI----LIDGLCKRGLME 149
           EM     + +  +Y +    L DG   +G +E
Sbjct: 580 EMRSCRFAGDASTYGLVTDMLHDGRLDKGFLE 611



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%)

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++D+A  +F +M++  P  ++V +S L+    K +         E+M    +S N+ +Y+
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           I+I+ LC+R  +  AL      +     P +VT   L+ G+C   R +EA+ L D M+  
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
           G  PD +  +TL     Q + + E
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASE 188


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 125/207 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +LDAA+ L  ++  + + P+I TYN++I G C L + ++   L  ++  + + PN
Sbjct: 213 LCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPN 272

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+ILID  CKEG+++DA  +   M+EKG + +++TYS ++DGY     +  A  V+ 
Sbjct: 273 VHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFN 332

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + +  I PNI SYSILI+G CK+  + +A+  F       L PD VTY+ ++ G  + G
Sbjct: 333 VLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVG 392

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A +++D MLR G  PD  L STL
Sbjct: 393 RIGDAKKIFDEMLRVGPTPDICLHSTL 419



 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H +  L L   +     +PD+ TY+ +I   C    LD A+ L  ++    + PN
Sbjct: 178 LSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPN 237

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LID  CK G+ +    + S+M+      NV T+S LIDG  K   ++ A +V  
Sbjct: 238 IFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMR 297

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P+I++YS ++DG C RG ++ A   F+   D  + P++ +Y+ILI GYCK  
Sbjct: 298 HMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKK 357

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +AMQL+  + + G+ PD +  ST+
Sbjct: 358 NLAKAMQLFGEISQKGLKPDTVTYSTI 384



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 111/191 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  L D+G++P+I +Y+ +I GYC    L +A+QLF +++   LKP+++T++
Sbjct: 323 QVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYS 382

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++    + GR+ DA  +F +ML  GP  ++  +S L+ GYFK   ++ A  ++ ++  N
Sbjct: 383 TILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERN 442

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               NI  Y+++I+GLCK   + EA   F       L+PDV TY ++I G+C+ G   E 
Sbjct: 443 REDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEV 502

Query: 187 MQLYDSMLRNG 197
             +   M  NG
Sbjct: 503 KGILRKMEDNG 513



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A ++   + ++G+EPDIITY+ I+ GYC   ++D A ++F  L    +KPN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +++ILI+ +CK+  +  A  +F ++ +KG K + VTYS ++ G  +   +  A  +++
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +P+I  +S L+ G  K GL+EEA+  F     N    ++  Y ++I G CK  
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           R  EA  +++ +   G++PD      +  YN+  +G
Sbjct: 463 RVREAHAIFEKLPSIGLIPD------VRTYNVMITG 492



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L  E  +  A+ LF +L    + EP+ + Y T++ G       ++ + L   +     KP
Sbjct: 142 LFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKP 201

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T++I+IDA CK+  +D A  + ++M +K    N+ TY+ LIDG  K    +    + 
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLL 261

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   NI+PN+ ++SILIDGLCK G +E+A       ++  + PD++TY+ ++ GYC  
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+   A ++++ +   GI P+    S L +
Sbjct: 322 GQVDRARRVFNVLRDKGIKPNIFSYSILIN 351



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 1/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITF 65
            +D A  +       G+  +++T+NT++ G  + N++ +AV LF+KL   ++ +PN + +
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++   K G  +    +   M +   K +V TYS +ID   K  N+ +A ++  EM +
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            NI PNI +Y+ LIDGLCK G  E+        ++ ++ P+V T++ILI G CK G+  +
Sbjct: 232 KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVED 291

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A ++   M+  G+ PD +  S + D
Sbjct: 292 ADEVMRHMIEKGVEPDIITYSAIMD 316



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 120/211 (56%), Gaps = 4/211 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L  A++LFG+++ +GL+PD +TY+TI+ G   + R+ +A ++F+++  V   P+  
Sbjct: 355 KKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDIC 414

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
             + L+  + K G +++A ++FSK+       N+  Y+ +I+G  K+  ++ A  ++E++
Sbjct: 415 LHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKL 474

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++ +Y+++I G C+ GL +E         DN    + +TY ++++G+ ++ + 
Sbjct: 475 PSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKI 534

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
           +E +     M   G   D    G+L++ L +
Sbjct: 535 SEIVSFMKEMAGRGFSFDATTTGVLINVLKE 565



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LF ++      P +I ++ +     ++      V LF ++  + +  +     I
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +++C   R+D A  +    L+ G   NVVT++ L+ G F    +  A  +++++    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 128 I-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           I  PN V Y  +++GL KRG  E+ L         +  PDV TY+I+I   CK      A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M +  I P+    ++L D
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLID 246



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +F +L   GL PD+ TYN +I G+C     DE   +  K+       N
Sbjct: 458 LCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPAN 517

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           +IT+ +++  F +  ++ +      +M  +G   +  T   LI+
Sbjct: 518 NITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 127/209 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A++   ++ +RG+ P+++TY++I+ G+C+L R +EA  LF+++    + P+
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF IL+D   KEG + +A  +F  M+EKG + NV TY+ L+DGY     M  A  ++ 
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P++ SY+ILI G CK G ++EA           L PD VTY+ L++G+C+ G
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP +A +L + M   G++PD +  S + D
Sbjct: 307 RPQDAQKLLEEMRSYGLLPDLMTYSIVLD 335



 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 9/212 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KLF ++   G EPD+ITY+TII G C +     A+QL +K+     KPN + ++ +ID
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+  + +A    S+M+ +G   NVVTYS ++ G+        A  ++++M E N+ P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+++IL+DGL K G++ EA   F   ++  + P+V TY  L+ GYC   +  EA +L+
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + M+R G  P      ++  YN+   G   HC
Sbjct: 246 NIMVRKGCAP------SVRSYNILIKG---HC 268



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 113/197 (57%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +D A KLF  +  +G  P + +YN +I G+C   R+DEA  L  +++   L P+++T
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ L+  FC++GR  DA  +  +M   G   +++TYS ++DG  K  ++  AF++ + M 
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ I PNI  Y+ILI G+C  G +E A   F       + PDVVTY ++I G  K G   
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414

Query: 185 EAMQLYDSMLRNGIMPD 201
           EA +L+  M  +G +P+
Sbjct: 415 EACELFRDMAVHGCLPN 431



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 126/221 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  + ++G+EP++ TYN ++ GYCS +++DEA +LF  +      P+
Sbjct: 197 LSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPS 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI   CK GR+D+A  + ++M  K    + VTYS L+ G+ +    + A  + E
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLE 316

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++++YSI++DGLCK+G ++EA        ++ + P++  Y ILI+G C  G
Sbjct: 317 EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFG 376

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +   A +L+ ++   GI PD +  + +    L+   S E C
Sbjct: 377 KLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 112/195 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A  + G +   GL+P+ +T++T++ G  S  ++ +AV+LF+++  +  +P+ IT++
Sbjct: 27  HFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYS 86

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +  KM EKG K NVV YS +ID   K + +  A +   EM   
Sbjct: 87  TIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR 146

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+YS ++ G C  G   EA   F   ++ +++PD VT+ IL+ G  K G   EA
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M+  G+ P+
Sbjct: 207 QCVFETMIEKGVEPN 221



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  +++ + L PD +TY+T++ G+C   R  +A +L E++    L P+ +
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLM 328

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++I++D  CK+G +D+A  +   M E   + N+  Y+ LI G      +++A +++  +
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNL 388

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y+++I GL K GL  EA   F     +  LP+  TY ++I+G+ + G  
Sbjct: 389 FVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDT 448

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A +L + M+  G   D      L+D
Sbjct: 449 SNAGRLIEEMVGRGFSADSSTFQMLSD 475



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 37/190 (19%)

Query: 58  LKPNSITFTILIDAFC-------------------------------------KEGRMDD 80
           ++P+  T TILI+ FC                                      + ++ D
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +F +M++ G + +V+TYS +I+G  K  +   A  + ++M E    PN+V YS +ID
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK  L+ EA+      ++  + P+VVTY+ ++ G+C  GR  EA  L+  M+   +MP
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 201 DGLLLSTLAD 210
           D +  + L D
Sbjct: 186 DTVTFNILVD 195



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 74/139 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ HLD A +L   + +  +EP+I  Y  +I G C+  +L+ A +LF  L    ++P+
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T++I    K G  ++A  +F  M   G   N  TY+ +I G+ ++ +  +A  + E
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIE 456

Query: 122 EMCENNISPNIVSYSILID 140
           EM     S +  ++ +L D
Sbjct: 457 EMVGRGFSADSSTFQMLSD 475


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 126/207 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H++ A  L+ +   + + PD+ TYN +I G+C + +L +A+ LF K+T   + P+  
Sbjct: 345 KDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY 404

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+IL+D FCK+G + +A  + + M+++  K +VVTYS L+DGY     +  A  ++  M
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++ N+ SY+I+I+G CK  +++EA+  F       + PDV+TY+ LI G CK+GR 
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A++L D M   G  PD +  +++ D
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILD 551



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 113/195 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F  ++ RG+  ++ +YN +I G+C +  +DEA++LF+++   Q+ P+ IT++ 
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+  A  +  +M  +G + +++TY+ ++D   K  ++  A  +  ++    
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ +Y+IL+ GLC+ G +E+A   F   L      DV  Y ++I+G+C  G   EA+
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 188 QLYDSMLRNGIMPDG 202
            L   M  NG +PD 
Sbjct: 634 ALLSKMEENGCIPDA 648



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 106/194 (54%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++   G EPD IT  T I G+C   ++ +A+   +K+  +    + +++  LI+  CK G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
               A  +  +   K  + +VV Y+ +IDG  K +++  AFD+Y E     I P++ +Y+
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI G C  G +++A+  F+     +++PDV T++IL+ G+CK G   EA  +   M++ 
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 197 GIMPDGLLLSTLAD 210
            I PD +  S+L D
Sbjct: 433 SIKPDVVTYSSLMD 446



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 116/194 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  A  +   +  + ++PD++TY++++ GYC +N +++A  +F  ++   +  N  
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ I+I+ FCK   +D+A  +F +M  K    +V+TYS LIDG  KS  +  A ++ +EM
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+I++Y+ ++D LCK+  +++A+          + PD+ TY IL++G C++G+ 
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKL 594

Query: 184 TEAMQLYDSMLRNG 197
            +A ++++ +L  G
Sbjct: 595 EDARKVFEDLLVKG 608



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    ++   G   D ++Y T+I G C +     A++L  +     ++P+ + + 
Sbjct: 278 QIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYN 337

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID  CK+  ++DA  ++S+ + K    +V TY+ LI G+     +K A D++ +M   
Sbjct: 338 TIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSK 397

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P++ ++SIL+DG CK G ++EA       +   + PDVVTY+ L+ GYC      +A
Sbjct: 398 NIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKA 457

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             ++++M   G+       + +  YN+  +G
Sbjct: 458 ESIFNTMSHRGVT------ANVQSYNIMING 482



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 115/205 (56%), Gaps = 3/205 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KLF ++  + + PD+ITY+++I G C   R+  A++L +++     +P+ IT+  
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK+  +D A  + +K+  +G + ++ TY+ L+ G  +S  ++ A  V+E++    
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + ++ +Y+++I G C +GL +EAL       +N  +PD  TY I+I    +      A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 188 QLYDSMLRNGI---MPDGLLLSTLA 209
           +L   M+  G+   + D L+ S L 
Sbjct: 669 KLLREMIMRGLLVALTDDLVASILV 693



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 80/144 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL+L  ++  RG +PDIITYN+I+   C  + +D+A+ L  KL    ++P+
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TIL+   C+ G+++DA  +F  +L KG   +V  Y+ +I G+        A  +  
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLS 637

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M EN   P+  +Y I+I  L ++
Sbjct: 638 KMEENGCIPDAKTYEIIILSLFEK 661



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 63/122 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H+D A+ L  +L  +G+ PD+ TY  ++ G C   +L++A ++FE L       +
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T++I  FC +G  D+A  + SKM E G   +  TY  +I   F+      A  +  
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLR 672

Query: 122 EM 123
           EM
Sbjct: 673 EM 674



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 35/233 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    L L  ++  +G++ + +  N +I  +C L  +  A  +        L   
Sbjct: 120 LVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSV--------LTRG 171

Query: 62  SITFTILIDAFCKEGRMD------------DATMMFSKMLEKGPKANVV-TYSCLID--- 105
                IL D F ++   D            D   +F K   +    NV+ ++  LI+   
Sbjct: 172 VYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHK 231

Query: 106 GYFKSQNMKSAFDVYEE-----MCENNISPNIVSYSILIDGLCKRGLMEEALYAFH---C 157
            + K + +  +F++  E     + +N   P+ ++ +  I G C +G + +AL+ FH    
Sbjct: 232 TFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALH-FHDKVI 290

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+  HL  D V+Y  LI G CK G    A++L        + PD ++ +T+ D
Sbjct: 291 AMGFHL--DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIID 341


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 129/207 (62%), Gaps = 4/207 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ LF ++  +G++  ++TYN+++ G C   + ++ VQL + +T  ++ PN ITF +
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F KEG++ +A  ++ +M+ KG   N +TY+ L+DGY     +  A ++ + M  NN
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+IV+++ LI G CK   ++E +  F       L+ + VTY+IL++G+C++G+   A 
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 188 QLYDSMLRNGIMPD----GLLLSTLAD 210
           +L+  M+  G++PD    G+LL  L D
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCD 427



 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 122/201 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  +G+ P+ ITYN+++ GYC  NRL EA  + + +      P
Sbjct: 284 VFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSP 343

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT LI  +CK  R+D+   +F K+ ++G  AN VTYS L+ G+ +S  ++ A +++
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    + P++++Y IL+DGLC  G +E+AL  F     + +  D+V Y I+I G CK 
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A  L+ S+   G+ P+
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPN 484



 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 122/191 (63%), Gaps = 2/191 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PDI+T+ ++I GYC + R+DE ++LF K++   L  N++T++IL+  FC+ G+++ A  +
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M+  G   +V+TY  L+DG   +  ++ A +++E++ ++ ++ +IV Y+I+I+G+CK
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCK 462

Query: 145 RGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G +E+A   F C+L    + P+V+TY ++I G CK G  +EA  L   M  +G  P+  
Sbjct: 463 GGKVEDAWNLF-CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDC 521

Query: 204 LLSTLADYNLQ 214
             +TL   +L+
Sbjct: 522 TYNTLIRAHLR 532



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 114/205 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ +R ++ D+ TY+TII   C    +D A+ LF+++    +K + +T+  L+ 
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+ +D   +   M  +    NV+T++ LID + K   ++ A ++Y+EM    ISP
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP 308

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y+ L+DG C +  + EA       + N+  PD+VT+  LI+GYCK  R  E M+L+
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
             + + G++ + +  S L     QS
Sbjct: 369 RKISKRGLVANTVTYSILVQGFCQS 393



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 114/204 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+ L  ++ + G +P+++TYN+I+ G C       A+ L  K+    +K +  T
Sbjct: 148 ESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFT 207

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ +ID+ C++G +D A  +F +M  KG K+++VTY+ L+ G  K+        + ++M 
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT 267

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I PN++++++LID   K G ++EA   +   +   + P+ +TY  L+ GYC   R +
Sbjct: 268 SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA  + D M+RN   PD +  ++L
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSL 351



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 118/217 (54%), Gaps = 1/217 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C    A  + G++   G EPD  T+NT+I G C  +++ EAV L  ++     +PN +T+
Sbjct: 114 CKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTY 173

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++  CK G    A  +  KM E+  KA+V TYS +ID   +   + +A  +++EM  
Sbjct: 174 NSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 233

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I  ++V+Y+ L+ GLCK G   + +          ++P+V+T+ +LI  + K G+  E
Sbjct: 234 KGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQE 293

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
           A +LY  M+  GI P+ +  ++L D Y +Q+  S+ +
Sbjct: 294 ANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 114/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  +KLF +++ RGL  + +TY+ ++ G+C   +L+ A +LF+++  + + P+ +T+ 
Sbjct: 360 RVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG 419

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  C  G+++ A  +F  + +     ++V Y+ +I+G  K   ++ A++++  +   
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCK 479

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++Y+++I GLCK+G + EA        ++   P+  TY  LIR + + G  T +
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L + M   G   D   +  + D
Sbjct: 540 AKLIEEMKSCGFSADASSIKMVID 563



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 108/199 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+  +I T N +I  +C   +   A  +  K+  +  +P++ TF  LI+  C E ++ +A
Sbjct: 95  GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEA 154

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++ ++M+E G + NVVTY+ +++G  KS +   A D+  +M E N+  ++ +YS +ID 
Sbjct: 155 VVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDS 214

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC+ G ++ A+  F       +   +VTY  L+ G CKAG+  + +QL   M    I+P+
Sbjct: 215 LCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPN 274

Query: 202 GLLLSTLADYNLQSSGSQE 220
            +  + L D  ++    QE
Sbjct: 275 VITFNVLIDVFVKEGKLQE 293



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 6/150 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ AL++F  L    +  DI+ Y  II G C   ++++A  LF  L C  +KPN +T+T
Sbjct: 430 KLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 489

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   CK+G + +A ++  KM E G + N  TY+ LI  + +  ++ ++  + EEM   
Sbjct: 490 VMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 549

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH 156
             S +  S  ++ID      ++  A++ F 
Sbjct: 550 GFSADASSIKMVID------MLSSAVWWFK 573



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 9/210 (4%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE   D A+ LF ++      P ++ ++    G  S  + +  +   +K+    +  N 
Sbjct: 44  IKE---DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNI 100

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+I+ FC+  +   A  +  K+++ G + +  T++ LI+G      +  A  +   
Sbjct: 101 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVAR 160

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M EN   PN+V+Y+ +++G+CK G    AL       + ++  DV TY+ +I   C+ G 
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGC 220

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              A+ L+  M   GI       S+L  YN
Sbjct: 221 IDAAISLFKEMETKGIK------SSLVTYN 244


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 133/210 (63%), Gaps = 6/210 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H++ A  L+ ++  +G+ P+++TY+ +I G+  + +L +A+ LF K+    +KP+  
Sbjct: 89  KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 148

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+D FCK+ +M +   +F+ M+++G   +VVTY+ L+DGY   + + +A  ++  M
Sbjct: 149 TFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTM 208

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKA 180
            +  ++P+I SY+ILI+G CK   +++A+  F   HC    +++P+VVTY  LI G  K+
Sbjct: 209 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK---NIIPNVVTYNSLIDGLSKS 265

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR + A+QL D M   G+ P+ L  +++ D
Sbjct: 266 GRISYALQLVDQMHDRGVPPNILTYNSIID 295



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 106/197 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +  A     +L   G   D ++Y T+I G C +     A+ L +++    ++ N++ 
Sbjct: 20  KGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVM 79

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +I   CK+  ++DA  ++S+M+ KG   NVVTYS LI G+F    +K A D++ ++ 
Sbjct: 80  YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 139

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             NI P+  +++IL+DG CK   M+E    F   +   ++PDVVTY  L+ GY       
Sbjct: 140 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVN 199

Query: 185 EAMQLYDSMLRNGIMPD 201
            A  ++++M + G+ PD
Sbjct: 200 TAKSIFNTMAQGGVNPD 216



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 107/190 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +     +F  +  +G+ PD++TYN+++ GY  +  ++ A  +F  +    + P+  
Sbjct: 159 KDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIR 218

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ FCK  ++D A  +F++M  K    NVVTY+ LIDG  KS  +  A  + ++M
Sbjct: 219 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 278

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PNI++Y+ +ID L K   +++A+       D  + P + TY ILI G CK GR 
Sbjct: 279 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRL 338

Query: 184 TEAMQLYDSM 193
            +A  +++ +
Sbjct: 339 KDARNIFEDL 348



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 93/154 (60%), Gaps = 2/154 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  +   G+ PDI +YN +I G+C + ++D+A+ LF ++ C  + PN
Sbjct: 194 LVKE--VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 251

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID   K GR+  A  +  +M ++G   N++TY+ +ID  FK+  +  A  +  
Sbjct: 252 VVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALIT 311

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +  +  I P++ +Y+ILIDGLCK G +++A   F
Sbjct: 312 KFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 103/189 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P+ IT NT+I G C   ++ +A    +KL  +    + +++  LI   CK G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  ++  K  + N V Y+ +I G  K +++  AFD+Y EM    ISPN+V+YS LI G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
               G +++A+  F+  +  ++ PD  T+ IL+ G+CK  +  E   ++  M++ GI+PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 202 GLLLSTLAD 210
            +  ++L D
Sbjct: 182 VVTYNSLVD 190



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL+L  Q+ DRG+ P+I+TYN+II      +++D+A+ L  K     ++P+
Sbjct: 262 LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPS 321

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM 88
             T+TILID  CK GR+ DA  +F  +
Sbjct: 322 MYTYTILIDGLCKGGRLKDARNIFEDL 348


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 127/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++P I+TY+++I G+C  +RLDEA Q+FE +      P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A ++++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + PNI++Y+ L+DGLCK G +E+A+  F     + + P + TY I+I G CKAG
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ ++   G+ PD +  +T+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTM 542



 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A  L  ++    LEP ++ YNTII G C    +D+A+ LF+++    ++PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+E+    +V T+S LID + K   +  A  +Y+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+IV+YS LI+G C    ++EA   F   +  H  PDVVTY  LI+G+CK  
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+++  M + G++ + +  + L
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNIL 437



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 123/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   C+  R  +A +L   +   ++ P+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+ LIDAF KEG++ +A  ++ +M+++    ++VTYS LI+G+     +  A  ++E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++V+Y+ LI G CK   +EE +  F       L+ + VTY ILI+G  +AG
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ P+ +  +TL D
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EP+I+T ++++ GYC   R+ EAV L +++     +PN++
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+ KG + ++VTY  +++G  K  +   AF++  +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P ++ Y+ +IDGLCK   M++AL  F       + P+VVTY+ LI   C  GR 
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I PD    S L D
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALID 334



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  +G +PD++TY  ++ G C     D A  L  K+   +L+P  + +  +ID
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   MDDA  +F +M  KG + NVVTYS LI           A  +  +M E  I+P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ ++S LID   K G + EA   +   +   + P +VTY+ LI G+C   R  EA Q++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+     PD +  +TL
Sbjct: 385 EFMVSKHCFPDVVTYNTL 402



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 114/206 (55%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+   G +P+ +T+NT+I G    N+  EA+ L +++     +P+ 
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G  D A  + +KM +   +  V+ Y+ +IDG  K ++M  A ++++E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + PDV T++ LI  + K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I P  +  S+L
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSL 367



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  LD A+ LFG++      P II ++ ++     +N+ D  + L E++  + +  N 
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ILI+ FC+  ++  A  +  KM++ G + N+VT S L++GY  S+ +  A  + ++
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      PN V+++ LI GL       EA+      +     PD+VTY +++ G CK G 
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L + M +  + P  L+ +T+ D
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIID 264



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 110/214 (51%), Gaps = 4/214 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++  +++F +++ RGL  + +TYN +I G       D A ++F+++    + PN +T+ 
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK G+++ A ++F  +     +  + TY+ +I+G  K+  ++  +D++  +   
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ +I G C++G  EEA   F    ++  LP+   Y  LIR   + G    +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590

Query: 187 MQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
            +L   M   G   D    GL+ + L D  L  S
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 4/222 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K    D  + L  Q+ + G+  +  TY+ +I  +C  ++L  A+ +  K+  +  +PN
Sbjct: 91  IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 150

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + L++ +C   R+ +A  +  +M   G + N VT++ LI G F       A  + +
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y ++++GLCKRG  + A    +      L P V+ Y  +I G CK  
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270

Query: 182 RPTEAMQLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
              +A+ L+  M   GI P+ +    L+S L +Y   S  S+
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ +F  L    +EP I TYN +I G C   ++++   LF  L+   +KP+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  FC++G  ++A  +F +M E G   N   Y+ LI    +  + +++ ++ +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595

Query: 122 EM 123
           EM
Sbjct: 596 EM 597



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++    LF  L+ +G++PD++ YNT+I G+C     +EA  LF+++      PNS 
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            +  LI A  ++G  + +  +  +M   G   +  T
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 127/207 (61%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             +KE  L  A KL+ ++  R ++P I+TY+++I G+C  +RLDEA Q+FE +      P+
Sbjct: 950  FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A ++++
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM  + + PNI++Y+ L+DGLCK G +E+A+  F     + + P + TY I+I G CKAG
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  +   L+ ++   G+ PD +  +T+
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTM 1156



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 114/198 (57%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K    D A  L  ++    LEP ++ YNTII G C    +D+A+ LF+++    ++PN
Sbjct: 845  LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 904

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T++ LI   C  GR  DA+ + S M+E+    +V T+S LID + K   +  A  +Y+
Sbjct: 905  VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 964

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM + +I P+IV+YS LI+G C    ++EA   F   +  H  PDVVTY  LI+G+CK  
Sbjct: 965  EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 1024

Query: 182  RPTEAMQLYDSMLRNGIM 199
            R  E M+++  M + G++
Sbjct: 1025 RVEEGMEVFREMSQRGLV 1042



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 117/198 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G +PDI+ YN II   C   R+++A   F+++    ++PN +T+T L++
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C   R  DA  + S M++K    NV+TYS L+D + K+  +  A +++EEM   +I P
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS LI+GLC    ++EA   F   +    L DVV+Y  LI G+CKA R  + M+L+
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G++ + +  +TL
Sbjct: 457 REMSQRGLVSNTVTYNTL 474



 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 124/207 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +  A +LF ++    ++PDI+TY+++I G C  +R+DEA Q+F+ +       +
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  LI+ FCK  R++D   +F +M ++G  +N VTY+ LI G+F++ ++  A + + 
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ISP+I +Y+IL+ GLC  G +E+AL  F       +  D+VTY  +IRG CK G
Sbjct: 493 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L+ S+   G+ PD +  +T+
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTM 579



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 114/198 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL + G++   G EPD +T  +++ G+C  NR+ +AV L +K+  +  KP+ + +  +ID
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK  R++DA   F ++  KG + NVVTY+ L++G   S     A  +  +M +  I+P
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++YS L+D   K G + EA   F   +   + PD+VTY+ LI G C   R  EA Q++
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M+  G + D +  +TL
Sbjct: 422 DLMVSKGCLADVVSYNTL 439



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 123/209 (58%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  H+D AL LF ++  +G+ P+++TY+++I   C+  R  +A +L   +   ++ P+
Sbjct: 880  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              TF+ LIDAF KEG++ +A  ++ +M+++    ++VTYS LI+G+     +  A  ++E
Sbjct: 940  VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M   +  P++V+Y+ LI G CK   +EE +  F       L+ + VTY ILI+G  +AG
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                A +++  M+ +G+ P+ +  +TL D
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLD 1088



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G EP+I+T ++++ GYC   R+ EAV L +++     +PN++
Sbjct: 742 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 801

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI       +  +A  +  +M+ KG + ++VTY  +++G  K  +   AF++  +M
Sbjct: 802 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P ++ Y+ +IDGLCK   M++AL  F       + P+VVTY+ LI   C  GR 
Sbjct: 862 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   M+   I PD    S L D
Sbjct: 922 SDASRLLSDMIERKINPDVFTFSALID 948



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    D  + L  ++   G+  D+ T+N +I  +C   ++  A+ +  K+  +  +P+
Sbjct: 198 IVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPD 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   L++ FC+  R+ DA  +  KM+E G K ++V Y+ +ID   K++ +  AFD ++
Sbjct: 258 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    I PN+V+Y+ L++GLC      +A       +   + P+V+TY+ L+  + K G
Sbjct: 318 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA +L++ M+R  I PD +  S+L
Sbjct: 378 KVLEAKELFEEMVRMSIDPDIVTYSSL 404



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  +  +G   D+++YNT+I G+C   R+++ ++LF +++   L  N++T+ 
Sbjct: 413 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 472

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F + G +D A   FS+M   G   ++ TY+ L+ G   +  ++ A  ++E+M + 
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            +  +IV+Y+ +I G+CK G +EEA ++  C+L    L PD+VTY  ++ G C  G   E
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEA-WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 591

Query: 186 AMQLYDSMLRNGIMPDGLLLS 206
              LY  M + G+M +   LS
Sbjct: 592 VEALYTKMKQEGLMKNDCTLS 612



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A+ L  ++  +G +PD++TY  ++ G C     D A  L  K+   +L+P  + +  +ID
Sbjct: 819  AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 878

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              CK   MDDA  +F +M  KG + NVVTYS LI           A  +  +M E  I+P
Sbjct: 879  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 938

Query: 131  NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            ++ ++S LID   K G + EA   +   +   + P +VTY+ LI G+C   R  EA Q++
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 191  DSMLRNGIMPDGLLLSTL 208
            + M+     PD +  +TL
Sbjct: 999  EFMVSKHCFPDVVTYNTL 1016



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 114/206 (55%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+   G +P+ +T+NT+I G    N+  EA+ L +++     +P+ 
Sbjct: 776 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 835

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G  D A  + +KM +   +  V+ Y+ +IDG  K ++M  A ++++E
Sbjct: 836 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + PDV T++ LI  + K G+
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA +LYD M++  I P  +  S+L
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSL 981



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  LD A+ LFG++      P II ++ ++     +N+ D  + L E++  + +  N 
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 730

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ILI+ FC+  ++  A  +  KM++ G + N+VT S L++GY  S+ +  A  + ++
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      PN V+++ LI GL       EA+      +     PD+VTY +++ G CK G 
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L + M +  + P  L+ +T+ D
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIID 878



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 110/214 (51%), Gaps = 4/214 (1%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             ++  +++F +++ RGL  + +TYN +I G       D A ++F+++    + PN +T+ 
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 1084

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+D  CK G+++ A ++F  +     +  + TY+ +I+G  K+  ++  +D++  +   
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             + P++V+Y+ +I G C++G  EEA   F    ++  LP+   Y  LIR   + G    +
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204

Query: 187  MQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
             +L   M   G   D    GL+ + L D  L  S
Sbjct: 1205 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 1238



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +++  L+ A+ LF  +      P I+ +N ++     L + D  + L +K+  + ++ + 
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 223

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF I+I+ FC   ++  A  +  KML+ G + + VT   L++G+ +   +  A  + ++
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+IV+Y+ +ID LCK   + +A   F       + P+VVTY  L+ G C + R
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A +L   M++  I P+ +  S L D
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLD 371



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 4/217 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             D  + L  Q+ + G+  +  TY+ +I  +C  ++L  A+ +  K+  +  +PN +T +
Sbjct: 710 KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS 769

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++ +C   R+ +A  +  +M   G + N VT++ LI G F       A  + + M   
Sbjct: 770 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+Y ++++GLCKRG  + A    +      L P V+ Y  +I G CK     +A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 187 MQLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
           + L+  M   GI P+ +    L+S L +Y   S  S+
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 926



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 89/153 (58%), Gaps = 2/153 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF +++ RGL  + +TYNT+I G+     +D+A + F ++    + P+  
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 504

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   C  G ++ A ++F  M ++    ++VTY+ +I G  K+  ++ A+ ++  +
Sbjct: 505 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564

Query: 124 CENNISPNIVSYSILIDGLCKRGLME--EALYA 154
               + P+IV+Y+ ++ GLC +GL+   EALY 
Sbjct: 565 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 597



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 52/257 (20%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF  L+ +GL+PDI+TY T++ G C+   L E   L+ K+    L  N  
Sbjct: 550 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 609

Query: 64  TFT------------------------------------ILIDAFC-------------- 73
           T +                                     L+ AF               
Sbjct: 610 TLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRN 669

Query: 74  --KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
              E ++DDA  +F +M++  P  +++ +S L+    K         + E+M    I  N
Sbjct: 670 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 729

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +YSILI+  C+R  +  AL      +     P++VT + L+ GYC + R +EA+ L D
Sbjct: 730 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 789

Query: 192 SMLRNGIMPDGLLLSTL 208
            M   G  P+ +  +TL
Sbjct: 790 QMFVTGYQPNTVTFNTL 806



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   L+ A+ +F  L    +EP I TYN +I G C   ++++   LF  L+   +KP+
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             + +  +I  FC++G  ++A  +F +M E G   N   Y+ LI    +  + +++ ++ +
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 1209

Query: 122  EM 123
            EM
Sbjct: 1210 EM 1211



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++    LF  L+ +G++PD++ YNT+I G+C     +EA  LF+++      PNS 
Sbjct: 1127 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 1186

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
             +  LI A  ++G  + +  +  +M   G   +  T
Sbjct: 1187 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 122/183 (66%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+ LF +L    + PD+ TY+ +I G CS++R +EA  +FEK+T   +  NS+T+  
Sbjct: 338 VSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNS 397

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CKEG+MD A  + S+M E G + NV+T+S LIDGY K +N+++A  +Y EM   +
Sbjct: 398 LIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKS 457

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP++V+Y+ +IDG CK G M+EAL  +   LDN + P+  T + L+ G CK G+ ++A+
Sbjct: 458 LSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDAL 517

Query: 188 QLY 190
           +L+
Sbjct: 518 ELF 520



 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 120/209 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA  LF  +    + P+I  YN++I  YC +  + EA+ LF +L   ++ P+
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ILI   C   R ++A  +F KM ++G  AN VTY+ LIDG  K   M  A ++  
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M EN + PN++++S LIDG CK   ++ A+  +   +   L PDVVTY  +I G+CK G
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA++LY  ML NGI P+   +S L D
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLD 505



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 113/208 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+K    +   +++ ++   GL P +IT+ T+I G C    L  A ++F+++    + P
Sbjct: 156 VLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             I +TILI   C + ++++A  M   M E G   NV TY+ L+DGY K  N K A  +Y
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY 275

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M    + P++V++ ILIDGLCK G M+ A   F   +   + P++  Y  LI  YCK 
Sbjct: 276 QDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKV 335

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G  +EAM L+  + R  + PD    S L
Sbjct: 336 GDVSEAMALFLELERFEVSPDVFTYSIL 363



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 5/214 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +   + + G+ P++ TYNT++ GYC L    +A++L++ +    L P+ +TF I
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGI 292

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G M  A  +F  M++     N+  Y+ LID Y K  ++  A  ++ E+    
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP++ +YSILI GLC     EEA   F       +L + VTY  LI G CK G+  +A+
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD-----YNLQSS 216
           ++   M  NG+ P+ +  STL D      NLQ++
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 15/211 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D AL++  Q+T+ G+EP++IT++T+I GYC +  L  A+ ++ ++    L P+ +
Sbjct: 404 KEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVV 463

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G M +A  ++S ML+ G   N  T SCL+DG  K   +  A +++ E 
Sbjct: 464 TYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEK 523

Query: 124 CENNIS-------------PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
            E                  N V+Y+ LI GLC+ G   +A+  F       L PD V Y
Sbjct: 524 IEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIY 583

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +++RG  +       M L+  ML+ G++P+
Sbjct: 584 VVMLRGLFQVKYIL--MMLHADMLKFGVIPN 612



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L+  +   GL PD++T+  +I G C    +  A  LF  +    + PN   +  LID
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK G + +A  +F ++       +V TYS LI G       + A +++E+M +  I  
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILA 390

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y+ LIDG CK G M++AL       +N + P+V+T++ LI GYCK      AM +Y
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+   + PD +  + + D
Sbjct: 451 SEMVIKSLSPDVVTYTAMID 470



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           R +   +++E++    L P+ ITF  LID  C++G +  A  MF +M  KG    V+ Y+
Sbjct: 162 RFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYT 221

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            LI G      ++ A  ++  M E  + PN+ +Y+ L+DG CK    ++AL  +   L  
Sbjct: 222 ILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGE 281

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+PDVVT+ ILI G CK G    A  L+ +M++  + P+  + ++L D
Sbjct: 282 GLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330



 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 34/125 (27%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA----------------- 158
           AF     +  +  +PN+  Y  LI  LCK  L+EEAL  +H                   
Sbjct: 101 AFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLV 158

Query: 159 ---------------LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
                          + N L P V+T+  LI G C+ G    A +++D M   GI+P  +
Sbjct: 159 KTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVI 218

Query: 204 LLSTL 208
           + + L
Sbjct: 219 VYTIL 223


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 127/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A KL+ ++  R ++P I+TY+++I G+C  +RLDEA Q+FE +      P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R+++   +F +M ++G   N VTY+ LI G F++ +   A ++++
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + PNI++Y+ L+DGLCK G +E+A+  F     + + P + TY I+I G CKAG
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ ++   G+ PD +  +T+
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTM 337



 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A  L  ++    LEP ++ YNTII G C    +D+A+ LF+++    ++PN
Sbjct: 26  LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 85

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+E+    +V T+S LID + K   +  A  +Y+
Sbjct: 86  VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 145

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+IV+YS LI+G C    ++EA   F   +  H  PDVVTY  LI+G+CK  
Sbjct: 146 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 205

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E M+++  M + G++ + +  + L
Sbjct: 206 RVEEGMEVFREMSQRGLVGNTVTYNIL 232



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 123/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   C+  R  +A +L   +   ++ P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+ LIDAF KEG++ +A  ++ +M+++    ++VTYS LI+G+     +  A  ++E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++V+Y+ LI G CK   +EE +  F       L+ + VTY ILI+G  +AG
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ P+ +  +TL D
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLD 269



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 102/197 (51%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           + L  ++  +G +PD++TY  ++ G C     D A  L  K+   +L+P  + +  +ID 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
            CK   MDDA  +F +M  KG + NVVTYS LI           A  +  +M E  I+P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           + ++S LID   K G + EA   +   +   + P +VTY+ LI G+C   R  EA Q+++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 192 SMLRNGIMPDGLLLSTL 208
            M+     PD +  +TL
Sbjct: 181 FMVSKHCFPDVVTYNTL 197



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 110/214 (51%), Gaps = 4/214 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++  +++F +++ RGL  + +TYN +I G       D A ++F+++    + PN +T+ 
Sbjct: 206 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 265

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK G+++ A ++F  +     +  + TY+ +I+G  K+  ++  +D++  +   
Sbjct: 266 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 325

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ +I G C++G  EEA   F    ++  LP+   Y  LIR   + G    +
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385

Query: 187 MQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
            +L   M   G   D    GL+ + L D  L  S
Sbjct: 386 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 419



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 70/127 (55%)

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M+ KG + ++VTY  +++G  K  +   AF++  +M +  + P ++ Y+ +IDGLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   M++AL  F       + P+VVTY+ LI   C  GR ++A +L   M+   I PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 204 LLSTLAD 210
             S L D
Sbjct: 123 TFSALID 129



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ +F  L    +EP I TYN +I G C   ++++   LF  L+   +KP+
Sbjct: 271 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 330

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  FC++G  ++A  +F +M E G   N   Y+ LI    +  + +++ ++ +
Sbjct: 331 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 390

Query: 122 EM 123
           EM
Sbjct: 391 EM 392



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++    LF  L+ +G++PD++ YNT+I G+C     +EA  LF+++      PNS 
Sbjct: 308 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 367

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            +  LI A  ++G  + +  +  +M   G   +  T
Sbjct: 368 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 125/207 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  A+++FG++  +GL P+++TYN +I G CS  ++DEAV L +++    L+PN +
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  +LI+ FCK   +++A  +F+ M ++G   N +TY+ LID Y K   M+ AF +Y  M
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P + +Y+ LI GLC++G ++ A    +  +   L  DVVTY ILI   CK G  
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++L D M   G+ P  +  +TL D
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMD 446



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE        ++ ++  R +E ++I++N ++ G C + +L+ A  + E +    + PN
Sbjct: 130 LVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPN 189

Query: 62  SITFTILIDAFCKEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            IT+  LID +CK GR   M  A  +  +M+ KG   N VTY+ LIDG+ K +N+  A  
Sbjct: 190 VITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMR 249

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+ EM    + PN+V+Y+ILI+GLC  G ++EA+      + + L P+VVT+ +LI G+C
Sbjct: 250 VFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFC 309

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K     EA+ L++ M + G+ P+ +  +TL D
Sbjct: 310 KNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341



 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 117/196 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +  +D A+ L  Q+    LEP+++T+N +I G+C    ++EA+ LF  +    + PN
Sbjct: 273 LCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPN 332

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T LIDA+CK+GRM+DA  +++ M+++G    V TY+CLI G  +  ++K+A  +  
Sbjct: 333 AMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMN 392

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +S ++V+Y+ILID LCK+G   +A+       +  L P  VTY  L+ GYC+ G
Sbjct: 393 EMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREG 452

Query: 182 RPTEAMQLYDSMLRNG 197
               A+ +   M R G
Sbjct: 453 NLRAALIVRTRMERKG 468



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 117/203 (57%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDE---AVQLFEKLTCVQL 58
           L K   L+ A  +   +   G+ P++ITYNT+I GYC + R+ +   A  + +++    +
Sbjct: 165 LCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGI 224

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN +T+ ILID FCK+  +  A  +F +M  +G + NVVTY+ LI+G      +  A  
Sbjct: 225 CPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVA 284

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + ++M  +++ PN+V++++LI+G CK   + EA+  F+      + P+ +TY  LI  YC
Sbjct: 285 LRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           K GR  +A  LY+ M+  GI P+
Sbjct: 345 KDGRMEDAFALYNMMIDRGIFPE 367



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 118/202 (58%), Gaps = 3/202 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK   ++  +G+ P+ +TYN +I G+C    +  A+++F ++    L+PN +T+ IL
Sbjct: 213 DAILK---EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNIL 269

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C +G++D+A  +  +M+    + NVVT++ LI+G+ K++ +  A +++ +M +  +
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN ++Y+ LID  CK G ME+A   ++  +D  + P+V TY  LI G C+ G    A  
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L + M+   +  D +  + L D
Sbjct: 390 LMNEMVSKKLSADVVTYNILID 411



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A  L+  + DRG+ P++ TYN +I G C    +  A  L  ++   +L  + +
Sbjct: 345 KDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVV 404

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILID+ CK+G    A  +  +M EKG   + VTY+ L+DGY +  N+++A  V   M
Sbjct: 405 TYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRM 464

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                  N+V++++LI G C +G +E+A    +  L+  L+P+  TY I           
Sbjct: 465 ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI----------- 513

Query: 184 TEAMQLYDSMLRNGIMPD 201
                + + M+  G +PD
Sbjct: 514 -----IKEEMMEKGFVPD 526



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 83/147 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  + AA  L  ++  + L  D++TYN +I   C      +AV+L +++    L P+
Sbjct: 378 LCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPS 437

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D +C+EG +  A ++ ++M  KG +ANVVT++ LI G+     ++ A  +  
Sbjct: 438 HVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLN 497

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLM 148
           EM E  + PN  +Y I+ + + ++G +
Sbjct: 498 EMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 3/160 (1%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
              + F++      K + I+   L+    KE    D   ++ +M+++  + NV++++ ++
Sbjct: 103 RGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVV 162

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL---MEEALYAFHCALDN 161
           +G  K   +  A DV E+M    +SPN+++Y+ LIDG CK G    M +A       +  
Sbjct: 163 NGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAK 222

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            + P+ VTY ILI G+CK    + AM+++  M R G+ P+
Sbjct: 223 GICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN 262



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 5/154 (3%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK-SQNMKSAFDV 119
           NSI   +L+ AF +  ++      F +  + G K ++++ + L+ G  K S+N    F V
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEF-V 142

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y EM +  I  N++S++I+++GLCK G +  A           + P+V+TY  LI GYCK
Sbjct: 143 YREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCK 202

Query: 180 AGRPT---EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            GR     +A  +   M+  GI P+ +  + L D
Sbjct: 203 MGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+L   +  +GLE D+  YN+I  G C LNR DEA  L   +    + PN+++FT 
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CKEG   +A  +F +M EKG   N++TY+ LIDGY K  NMK A  + +E+    
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ + + LI G C  G ++ AL  F       L+P+VVTY  +I G  K GR  EA 
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599

Query: 188 QLYDSMLRNGIMPDGLLLSTLA--------DYNLQSSGSQ 219
           +LYD M   G+ PD  + S+L           ++Q  GSQ
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQIQGSQ 639



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 2/199 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++AA  L  ++  +G++ + + +NT+I GYC    +DEA++L   +    L+ +  
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 440

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +    CK  R D+A  +   M+E+G   N ++++ LID Y K  N   A  V+ EM
Sbjct: 441 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 500

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
            E    PNI++Y++LIDG  KRG M+EA +     L+N  L+PDV T   LI G C  G+
Sbjct: 501 EEKGNVPNIITYNVLIDGYSKRGNMKEA-HKLKDELENRGLIPDVYTCTSLIHGECIDGK 559

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              A++L+D M + G++P+
Sbjct: 560 VDMALKLFDEMPQRGLVPN 578



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +  ++  AL LF ++TD+GL P   TY  +I G C   +++ A  L  ++    +  N +
Sbjct: 346 RSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV 405

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  LID +C+ G +D+A  +   M +KG +++V  Y+ +  G  K      A  +   M
Sbjct: 406 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 465

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +SPN +S++ LID  CK G   EA   F    +   +P+++TY +LI GY K G  
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 525

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +L D +   G++PD
Sbjct: 526 KEAHKLKDELENRGLIPD 543



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 14/215 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD-----EAVQLFEK--LT 54
           L K   ++   KL  ++  +G++ +++TYN  I GY    RLD     E + L EK  + 
Sbjct: 239 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY--FKRLDLGGVAEILTLMEKEGVA 296

Query: 55  CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           C     N +T+T+LI  F   G++++A  +F +M EKG +A+V  Y+ +I    +S N+K
Sbjct: 297 C-----NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A  +++EM +  + P+  +Y  LI G+CK G ME A    +      +  + V +  LI
Sbjct: 352 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            GYC++G   EA++L   M + G+  D    +++A
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIA 446



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 106/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K   L    ++   +   G+  +++TY  +I G+ ++ +++EA +LFE++    ++ + 
Sbjct: 275 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 334

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +T +I   C+ G +  A ++F +M +KG   +  TY  LI G  K+  M++A  +  E
Sbjct: 335 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 394

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I  N V ++ LIDG C+ G+++EAL          L  DV  Y  +  G CK  R
Sbjct: 395 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 454

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L  SM+  G+ P+ +  +TL D
Sbjct: 455 KDEAKGLLFSMVERGVSPNTMSFTTLID 482



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 102/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+ L+ F ++ +  +E  + +   ++ G C    ++   +L +++    +K N +T+ 
Sbjct: 209 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 268

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             I+ + K   +     + + M ++G   NVVTY+ LI G+     ++ A  ++EEM E 
Sbjct: 269 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 328

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I  ++  Y+ +I   C+ G ++ AL  F    D  L+P   TY  LI G CKAG+   A
Sbjct: 329 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M   GI  + ++ +TL D
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLID 412



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+ F  +  +G   D  +    +       ++D  ++ F ++  + ++    + TI++D
Sbjct: 178 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 237

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G ++    +  ++  KG KANVVTY+  I+GYFK  ++    ++   M +  ++ 
Sbjct: 238 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 297

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y++LI G    G +EEA   F    +  +  DV  Y  +I   C++G    A+ L+
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357

Query: 191 DSMLRNGIMP 200
           D M   G++P
Sbjct: 358 DEMTDKGLIP 367



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 80/139 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A ++F ++ ++G  P+IITYN +I GY     + EA +L ++L    L P+  
Sbjct: 486 KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVY 545

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T LI   C +G++D A  +F +M ++G   NVVTY+ +I G  K    + AF +Y+EM
Sbjct: 546 TCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEM 605

Query: 124 CENNISPNIVSYSILIDGL 142
            E  ++P+   YS L+  L
Sbjct: 606 KETGLTPDDTVYSSLVGSL 624


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+L   +  +GLE D+  YN+I  G C LNR DEA  L   +    + PN+++FT 
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CKEG   +A  +F +M EKG   N++TY+ LIDGY K  NMK A  + +E+    
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ + + LI G C  G ++ AL  F       L+P+VVTY  +I G  K GR  EA 
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +LYD M   G+ PD  + S+L
Sbjct: 596 KLYDEMKETGLTPDDTVYSSL 616



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 2/199 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++AA  L  ++  +G++ + + +NT+I GYC    +DEA++L   +    L+ +  
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF 436

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +    CK  R D+A  +   M+E+G   N ++++ LID Y K  N   A  V+ EM
Sbjct: 437 AYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREM 496

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
            E    PNI++Y++LIDG  KRG M+EA +     L+N  L+PDV T   LI G C  G+
Sbjct: 497 EEKGNVPNIITYNVLIDGYSKRGNMKEA-HKLKDELENRGLIPDVYTCTSLIHGECIDGK 555

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              A++L+D M + G++P+
Sbjct: 556 VDMALKLFDEMPQRGLVPN 574



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +  ++  AL LF ++TD+GL P   TY  +I G C   +++ A  L  ++    +  N +
Sbjct: 342 RSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV 401

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  LID +C+ G +D+A  +   M +KG +++V  Y+ +  G  K      A  +   M
Sbjct: 402 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 461

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +SPN +S++ LID  CK G   EA   F    +   +P+++TY +LI GY K G  
Sbjct: 462 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 521

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +L D +   G++PD
Sbjct: 522 KEAHKLKDELENRGLIPD 539



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 14/215 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD-----EAVQLFEK--LT 54
           L K   ++   KL  ++  +G++ +++TYN  I GY    RLD     E + L EK  + 
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY--FKRLDLGGVAEILTLMEKEGVA 292

Query: 55  CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           C     N +T+T+LI  F   G++++A  +F +M EKG +A+V  Y+ +I    +S N+K
Sbjct: 293 C-----NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A  +++EM +  + P+  +Y  LI G+CK G ME A    +      +  + V +  LI
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            GYC++G   EA++L   M + G+  D    +++A
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIA 442



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 106/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K   L    ++   +   G+  +++TY  +I G+ ++ +++EA +LFE++    ++ + 
Sbjct: 271 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 330

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +T +I   C+ G +  A ++F +M +KG   +  TY  LI G  K+  M++A  +  E
Sbjct: 331 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 390

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I  N V ++ LIDG C+ G+++EAL          L  DV  Y  +  G CK  R
Sbjct: 391 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 450

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L  SM+  G+ P+ +  +TL D
Sbjct: 451 KDEAKGLLFSMVERGVSPNTMSFTTLID 478



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 102/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+ L+ F ++ +  +E  + +   ++ G C    ++   +L +++    +K N +T+ 
Sbjct: 205 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 264

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             I+ + K   +     + + M ++G   NVVTY+ LI G+     ++ A  ++EEM E 
Sbjct: 265 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 324

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I  ++  Y+ +I   C+ G ++ AL  F    D  L+P   TY  LI G CKAG+   A
Sbjct: 325 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M   GI  + ++ +TL D
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLID 408



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 96/190 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+ F  +  +G   D  +    +       ++D  ++ F ++  + ++    + TI++D
Sbjct: 174 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 233

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G ++    +  ++  KG KANVVTY+  I+GYFK  ++    ++   M +  ++ 
Sbjct: 234 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 293

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y++LI G    G +EEA   F    +  +  DV  Y  +I   C++G    A+ L+
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353

Query: 191 DSMLRNGIMP 200
           D M   G++P
Sbjct: 354 DEMTDKGLIP 363



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 80/139 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A ++F ++ ++G  P+IITYN +I GY     + EA +L ++L    L P+  
Sbjct: 482 KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVY 541

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T LI   C +G++D A  +F +M ++G   NVVTY+ +I G  K    + AF +Y+EM
Sbjct: 542 TCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEM 601

Query: 124 CENNISPNIVSYSILIDGL 142
            E  ++P+   YS L+  L
Sbjct: 602 KETGLTPDDTVYSSLVGSL 620



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 86/166 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  L   + +RG+ P+ +++ T+I  YC      EA ++F ++      PN IT+ +L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID + K G M +A  +  ++  +G   +V T + LI G      +  A  +++EM +  +
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            PN+V+Y+ +I GL K G  EEA   +    +  L PD   Y+ L+
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 133/210 (63%), Gaps = 6/210 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H++ A  L+ ++  +G+ P+++TY+ +I G+  + +L +A+ LF K+    +KP+  
Sbjct: 207 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 266

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+D FCK+ +M +   +F+ M+++G   +VVTY+ L+DGY   + + +A  ++  M
Sbjct: 267 TFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM 326

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKA 180
            +  ++P+I SY+ILI+G CK   +++A+  F   HC    +++P+VVTY  LI G  K+
Sbjct: 327 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK---NIIPNVVTYNSLIDGLSKS 383

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR + A+QL D M   G+ P+ L  +++ D
Sbjct: 384 GRISYALQLVDQMHDRGVPPNILTYNSIID 413



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 22/218 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  +   G+ PDI +YN +I G+C + ++D+A+ LF ++ C  + PN
Sbjct: 312 LVKE--VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 369

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID   K GR+  A  +  +M ++G   N++TY+ +ID  FK+  +  A  +  
Sbjct: 370 VVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALIT 429

Query: 122 EMCENNISPNIVSYSILIDGL--------------------CKRGLMEEALYAFHCALDN 161
           +  +  I P++ +Y+ILIDGL                    CK+GL +EAL       D+
Sbjct: 430 KFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDS 489

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
             +P+ VTY I IR         +A +L+  M+  G++
Sbjct: 490 SCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 107/196 (54%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C +  A     +L   G   D ++Y T+I G C +     A+ L +++    ++ N++ +
Sbjct: 139 CQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMY 198

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +I   CK+  ++DA  ++S+M+ KG   NVVTYS LI G+F    +K A D++ ++  
Sbjct: 199 NTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL 258

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            NI P+  +++IL+DG CK   M+E    F   +   ++PDVVTY  L+ GYC       
Sbjct: 259 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318

Query: 186 AMQLYDSMLRNGIMPD 201
           A  ++++M + G+ PD
Sbjct: 319 AKSIFNTMAQGGVNPD 334



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 5/212 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +     +F  +  +G+ PD++TYN+++ GYC +  ++ A  +F  +    + P+  
Sbjct: 277 KDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ FCK  ++D A  +F++M  K    NVVTY+ LIDG  KS  +  A  + ++M
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PNI++Y+ +ID L K   +++A+       D  + P + TY ILI G CK    
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGY 456

Query: 184 TEAMQLYDSML----RNGIMPDGL-LLSTLAD 210
              +  Y+ M+    + G+  + L LLS + D
Sbjct: 457 DITVNTYNVMIHGFCKKGLFDEALSLLSKMKD 488



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 39/242 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L  +   P    +N I+            + L +K+    +KPN     I
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 68  LIDAFCKEG----RMDDATMMFSKMLEKG------------------------------- 92
           LI  FC+ G    ++  A +   K++  G                               
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 93  ----PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                + N V Y+ +I G  K +++  AFD+Y EM    ISPN+V+YS LI G    G +
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A+  F+  +  ++ PD  T+ IL+ G+CK  +  E   ++  M++ GI+PD +  ++L
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 209 AD 210
            D
Sbjct: 307 MD 308



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 27/192 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL+L  Q+ DRG+ P+I+TYN+II      +++D+A+ L  K     ++P+
Sbjct: 380 LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPS 439

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILID  CK                +G    V TY+ +I G+ K      A  +  
Sbjct: 440 MYTYTILIDGLCKV---------------EGYDITVNTYNVMIHGFCKKGLFDEALSLLS 484

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +++  PN V+Y I I  L      ++A           L  +++T  +L R    A 
Sbjct: 485 KMKDSSCIPNAVTYEITIRSLLDNNENDKA---------EKLFREMITRGLLNRS---AS 532

Query: 182 RPTEAMQLYDSM 193
            P  +M+++ S+
Sbjct: 533 YPCSSMKIHQSL 544



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K N I+++     F     +DDA  +F+++L + P      ++ ++    KS++  +   
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLME---EALYAFH---CALDNHLLPDVVTYAI 172
           + ++M    I PN+ + +ILI   C+ GL+       + FH    AL  HL  D V+Y  
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHL--DQVSYGT 165

Query: 173 LIRGYCKAGRPTEAMQL 189
           LI G CK G    A+ L
Sbjct: 166 LIHGLCKVGETRAALDL 182


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 118/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D ALK+   +   G+E DI TYNT+ CG C +NRLDEA  L   +  + + PN +
Sbjct: 364 RKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYV 423

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   CK+G M +A  +F +M EKG   +VVTY+ +IDGY K  +++ A    +EM
Sbjct: 424 TYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEM 483

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P++ +Y+ L+ G C  G ++ AL  F         P+VV Y  LI G  K GR 
Sbjct: 484 EKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 543

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A QLYD ML+ G++PD  L S L
Sbjct: 544 EAAFQLYDDMLKAGLIPDDSLYSAL 568



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 100/197 (50%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++    +  D+  Y  +I  YC    +  A ++ ++     ++PN  T+ +LI+ FC
Sbjct: 269 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G+M+ A M+ + M  +G   N + ++ +IDGY +   +  A  +   M +  +  +I 
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ L  GLC+   ++EA    H  ++  ++P+ VTY  LI  +CK G   EA +L+  M
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448

Query: 194 LRNGIMPDGLLLSTLAD 210
              G  P  +  + + D
Sbjct: 449 AEKGATPSVVTYNVMID 465



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 76/139 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +LF ++ ++G  P ++TYN +I GY     + EA +  +++      P+  
Sbjct: 434 KDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVY 493

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G++D A  +F +M ++G + NVV Y+ LI G  K    ++AF +Y++M
Sbjct: 494 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 553

Query: 124 CENNISPNIVSYSILIDGL 142
            +  + P+   YS L+  L
Sbjct: 554 LKAGLIPDDSLYSALVGSL 572



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 95/191 (49%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G+E  + TY  ++    +   + +   LF ++    +  +   +T +I+A+C+ G 
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           M  A  +  + +  G + N  TY  LI+G+ K   M++A  +  +M    +  N + ++ 
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +IDG C++G++++AL          +  D+ TY  L  G C+  R  EA  L   M+  G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 198 IMPDGLLLSTL 208
           ++P+ +  +TL
Sbjct: 418 VVPNYVTYTTL 428



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 90/183 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +  + ++ G C   R+D+A +L + +    +  N++ +  L+D + ++        +   
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G +A V TY+ L+D    ++++     ++ EM  NN+  ++  Y+ +I+  C+ G 
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M  A       + N + P+  TY +LI G+CK G+   A  L   M   G+  + ++ +T
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 208 LAD 210
           + D
Sbjct: 358 MID 360



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALKLF ++  RG EP+++ Y  +I G     R + A QL++ +    L P+   ++ 
Sbjct: 508 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSA 567

Query: 68  LIDAFCKEGRMD 79
           L+ +   + R D
Sbjct: 568 LVGSLHTDNRKD 579


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  ALK+F +L ++GL PD+ TY+++I G+C    +++A +L +++    + PN
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D  CK G +  A  +F  M EKG + + VTYS +IDGY KS+N+  AF ++ 
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+   Y+ L+ G CK G ME+A+  F   L        +++  LI GYCK+ 
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC 712

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA QL+  M+   IMPD +  +T+ D++ ++   +E
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 751



 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A K F ++ D GL P+   Y  +I G+     L EA+ +F  L  + + P+  
Sbjct: 466 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 525

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T +  I    K GR+ +A  +FS++ EKG   +V TYS LI G+ K   ++ AF++++EM
Sbjct: 526 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 585

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C   I+PNI  Y+ L+DGLCK G ++ A   F    +  L PD VTY+ +I GYCK+   
Sbjct: 586 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 645

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L+  M   G+ P   + + L
Sbjct: 646 AEAFSLFHEMPSKGVQPHSFVYNAL 670



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 38/243 (15%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------- 55
           CH   L  A KL  ++T  GL+P+++ Y+T+I GY S  R++EA +L + ++C       
Sbjct: 360 CHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDI 419

Query: 56  -------------------------VQ---LKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                                    +Q   LKP+++TF   I  + K G+M +A   F +
Sbjct: 420 FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 479

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ML+ G   N   Y+ LI+G+FK+ N+  A  ++  +    + P++ + S  I GL K G 
Sbjct: 480 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++EAL  F    +  L+PDV TY+ LI G+CK G   +A +L+D M   GI P+  + + 
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599

Query: 208 LAD 210
           L D
Sbjct: 600 LVD 602



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 1/218 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K  +L  AL +F  L   G+ PD+ T +  I G     R+ EA+++F +L    L P+ 
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ LI  FCK+G ++ A  +  +M  KG   N+  Y+ L+DG  KS +++ A  +++ 
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+ V+YS +IDG CK   + EA   FH      + P    Y  L+ G CK G 
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +AM L+  ML+ G     L  +TL D   +S   QE
Sbjct: 680 MEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQE 716



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A+ LF ++  +G     +++NT+I GYC   ++ EA QLF+++   Q+ P+ +
Sbjct: 676 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 734

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G+M++A ++F +M E+    + VTY+ L+ GY K       F ++E+M
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 794

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V+Y ++I   CK   + EA       +   +L     + +LI   CK    
Sbjct: 795 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 854

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           TEA +L D M   G+ P     STL
Sbjct: 855 TEASKLLDEMGELGLKPSLAACSTL 879



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 35/254 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  +D  L++   +   G+  ++ITYN +I G C   ++++A ++ + +  +  KPN
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313

Query: 62  SITFTILIDAFCKEGRMDDATMMF-------------------------------SKMLE 90
           S TF +LI+ +C+E  M  A  +                                +K+LE
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373

Query: 91  K----GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           K    G K NVV YS LI GY     ++ A  + + M  + ++P+I  Y+ +I  L K G
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            MEEA           L PD VT+   I GY K G+ TEA + +D ML +G+MP+  L +
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493

Query: 207 TLADYNLQSSGSQE 220
            L + + ++    E
Sbjct: 494 VLINGHFKAGNLME 507



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 59/231 (25%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP----------------- 60
           + ++GL P+  TY  I  G C   R++EA   FE++    LKP                 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 61  ------------------NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
                             N IT+ +LI   CK G+M+ A  +   M+  G K N  T+  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC---AL 159
           LI+GY +  NM  A ++ +EM + N+ P+ VSY  +I+GLC            HC   +L
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC------------HCKDLSL 367

Query: 160 DNHLL---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            N LL         P+VV Y+ LI GY   GR  EA +L D M  +G+ PD
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD 418



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  AL+L  ++  R L P  ++Y  +I G C    L  A +L EK+T   LKPN +
Sbjct: 326 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 385

Query: 64  TFTILI--------------------------DAFC---------KEGRMDDATMMFSKM 88
            ++ LI                          D FC         K G+M++A+    ++
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G K + VT+   I GY K+  M  A   ++EM ++ + PN   Y++LI+G  K G +
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EAL  F       +LPDV T +  I G  K GR  EA++++  +   G++PD    S+L
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF ++ +R L  D +TY +++ GY  L +  E   LFEK+    +KP+ +
Sbjct: 745 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ++I A CKE  + +A  +  +++ KG       +  LI    K +++  A  + +EM
Sbjct: 805 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 864

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            E  + P++ + S L+    + G M+EA   F       L+PD  T   L+ G
Sbjct: 865 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 17/136 (12%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + F ILID++ + G +D+A  +F           V     ++    +  +++S       
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFF----------VAKNDSILISLIRCNSLRS------- 199

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + PN  +Y+I+  GLC+   M EA   F       L PD    + LI G+ + G 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 183 PTEAMQLYDSMLRNGI 198
             E +++ D M+  GI
Sbjct: 260 IDEVLRIKDVMVSCGI 275



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 61/120 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L  A KL  ++  +G+      ++ +I   C    L EA +L +++  + LKP+  
Sbjct: 815 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
             + L+ +F + G+MD+AT +F  +   G   +  T   L++G     + + A ++ +++
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 46/88 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KL  ++ + GL+P +   +T++  +    ++DEA ++FE +  + L P+
Sbjct: 848 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 907

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML 89
           + T   L++    +   +DA  +  +++
Sbjct: 908 TTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  ALK+F +L ++GL PD+ TY+++I G+C    +++A +L +++    + PN
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D  CK G +  A  +F  M EKG + + VTYS +IDGY KS+N+  AF ++ 
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+   Y+ L+ G CK G ME+A+  F   L        +++  LI GYCK+ 
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC 513

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA QL+  M+   IMPD +  +T+ D++ ++   +E
Sbjct: 514 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 552



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A K F ++ D GL P+   Y  +I G+     L EA+ +F  L  + + P+  
Sbjct: 267 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 326

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T +  I    K GR+ +A  +FS++ EKG   +V TYS LI G+ K   ++ AF++++EM
Sbjct: 327 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 386

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C   I+PNI  Y+ L+DGLCK G ++ A   F    +  L PD VTY+ +I GYCK+   
Sbjct: 387 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 446

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L+  M   G+ P   + + L
Sbjct: 447 AEAFSLFHEMPSKGVQPHSFVYNAL 471



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 38/243 (15%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------- 55
           CH   L  A KL  ++T  GL+P+++ Y+T+I GY S  R++EA +L + ++C       
Sbjct: 161 CHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDI 220

Query: 56  -------------------------VQ---LKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                                    +Q   LKP+++TF   I  + K G+M +A   F +
Sbjct: 221 FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 280

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ML+ G   N   Y+ LI+G+FK+ N+  A  ++  +    + P++ + S  I GL K G 
Sbjct: 281 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 340

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++EAL  F    +  L+PDV TY+ LI G+CK G   +A +L+D M   GI P+  + + 
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400

Query: 208 LAD 210
           L D
Sbjct: 401 LVD 403



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 1/218 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K  +L  AL +F  L   G+ PD+ T +  I G     R+ EA+++F +L    L P+ 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ LI  FCK+G ++ A  +  +M  KG   N+  Y+ L+DG  KS +++ A  +++ 
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+ V+YS +IDG CK   + EA   FH      + P    Y  L+ G CK G 
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +AM L+  ML+ G     L  +TL D   +S   QE
Sbjct: 481 MEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQE 517



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 35/254 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  +D  L++   +   G+  ++ITYN +I G C   ++++A ++ + +  +  KPN
Sbjct: 55  FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 114

Query: 62  SITFTILIDAFCKEGRMDDATMMF-------------------------------SKMLE 90
           S TF +LI+ +C+E  M  A  +                                +K+LE
Sbjct: 115 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 174

Query: 91  K----GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           K    G K NVV YS LI GY     ++ A  + + M  + ++P+I  Y+ +I  L K G
Sbjct: 175 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 234

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            MEEA           L PD VT+   I GY K G+ TEA + +D ML +G+MP+  L +
Sbjct: 235 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 294

Query: 207 TLADYNLQSSGSQE 220
            L + + ++    E
Sbjct: 295 VLINGHFKAGNLME 308



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 18/234 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A+ LF ++  +G     +++NT+I GYC   ++ EA QLF+++   Q+ P+ +
Sbjct: 477 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535

Query: 64  TFTILIDAFCKEGRMDDATMMFS-----------------KMLEKGPKANVVTYSCLIDG 106
           T+T +ID  CK G+M++A ++F                  KM+ KG K + VTY  +I  
Sbjct: 536 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYA 595

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           + K  N+  AF + +E+    +      + +LI  LCKR  + EA        +  L P 
Sbjct: 596 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 655

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   + L+R + +AG+  EA ++++ +   G++PD   L  L + NL  + S++
Sbjct: 656 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 709



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 59/231 (25%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP----------------- 60
           + ++GL P+  TY  I  G C   R++EA   FE++    LKP                 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 61  ------------------NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
                             N IT+ +LI   CK G+M+ A  +   M+  G K N  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC---AL 159
           LI+GY +  NM  A ++ +EM + N+ P+ VSY  +I+GLC            HC   +L
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC------------HCKDLSL 168

Query: 160 DNHLL---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            N LL         P+VV Y+ LI GY   GR  EA +L D M  +G+ PD
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD 219



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  AL+L  ++  R L P  ++Y  +I G C    L  A +L EK+T   LKPN +
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186

Query: 64  TFTILI--------------------------DAFC---------KEGRMDDATMMFSKM 88
            ++ LI                          D FC         K G+M++A+    ++
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G K + VT+   I GY K+  M  A   ++EM ++ + PN   Y++LI+G  K G +
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 306

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EAL  F       +LPDV T +  I G  K GR  EA++++  +   G++PD    S+L
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 61/120 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L  A KL  ++  +G+      ++ +I   C    L EA +L +++  + LKP+  
Sbjct: 598 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 657

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
             + L+ +F + G+MD+AT +F  +   G   +  T   L++G     + + A ++ +++
Sbjct: 658 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 46/88 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KL  ++ + GL+P +   +T++  +    ++DEA ++FE +  + L P+
Sbjct: 631 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 690

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML 89
           + T   L++    +   +DA  +  +++
Sbjct: 691 TTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 120/206 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D AL++   +  +G E DI TYNTI  G C LNR +EA +    +    + PN++
Sbjct: 402 KKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAV 461

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +FTI+ID  CKEG + +A  +F  M +KG K NVVTY+ LIDGY K   +K A+ + +EM
Sbjct: 462 SFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEM 521

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++ +I +Y+ L+ G C  G +EEAL   +      L   +VTY  +I G  K GR 
Sbjct: 522 ESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRS 581

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA +LYD M+  G+ PD  + ++L 
Sbjct: 582 EEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 103/203 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A  LF +L +RGL  +  TY  +I G C+  +LD A  L  ++    L  N + F 
Sbjct: 335 NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFN 394

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+ +CK+G +D+A  M   M +KG + ++ TY+ +  G  K    + A      M E 
Sbjct: 395 TLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEK 454

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN VS++I+ID  CK G + EA   F         P+VVTY  LI GY K G+  EA
Sbjct: 455 GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEA 514

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
            +L D M   G+  D    +TL 
Sbjct: 515 YRLKDEMESIGMTSDIYTYTTLV 537



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 114/208 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L  ++T +G++P+++TYNT++  Y  +   +   ++   +   ++  N
Sbjct: 225 LCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYN 284

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+T+LI+ +   G++ +A  +F KMLE+G +A++  ++ +I    K  NMK AF +++
Sbjct: 285 AATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFD 344

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E  +  N  +Y  LI G C  G ++ A    +      L  ++V +  LI GYCK G
Sbjct: 345 ELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKG 404

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              EA+++ D M + G   D    +T+A
Sbjct: 405 MIDEALRMQDVMEKKGFENDIFTYNTIA 432



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F ++ +RG+E DI  + +II   C L  +  A  LF++L    L  N+ T+  LI 
Sbjct: 304 AEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIH 363

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++D A M+ ++M  +G   N+V ++ LI+GY K   +  A  + + M +     
Sbjct: 364 GTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFEN 423

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I +Y+ +  GLCK    EEA       ++  + P+ V++ I+I  +CK G   EA +++
Sbjct: 424 DIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVF 483

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M + G  P+ +  +TL D
Sbjct: 484 QDMKKKGEKPNVVTYNTLID 503



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 82/141 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L  A ++F  +  +G +P+++TYNT+I GY    +L EA +L +++  + +  +  
Sbjct: 472 KEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIY 531

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+   C  G++++A  + +++  KG   ++VTY+ +I G  K    + AF +Y+EM
Sbjct: 532 TYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEM 591

Query: 124 CENNISPNIVSYSILIDGLCK 144
               ++P+   Y+ L+  L K
Sbjct: 592 MAAGLTPDDRVYTSLVANLHK 612



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 6/198 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ---LFEKLTCVQLKPNSIT 64
            +   K+F  +   GL+ D    + I+C   +L R D+ V     F+K+   ++     +
Sbjct: 161 FEEGFKVFDYMVHNGLKID--DRSCIVC-LLALKRSDQMVMSLGFFKKMVEFKVDVTVYS 217

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            TI+ID  CK+GR++ A  +  +M  KG K NVVTY+ L++ Y K  + +   ++   M 
Sbjct: 218 MTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLME 277

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + +  N  +Y++LI+     G + EA   F   L+  +  D+  +  +I   CK G   
Sbjct: 278 MDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMK 337

Query: 185 EAMQLYDSMLRNGIMPDG 202
            A  L+D +   G++ + 
Sbjct: 338 RAFALFDELNERGLVANA 355



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 82/175 (46%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           Y   +  +E  ++F+ +    LK +  +  + + A  +  +M  +   F KM+E      
Sbjct: 155 YVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVT 214

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           V + + +IDG  K   ++ A D+  EM    I PN+V+Y+ L++   K    E       
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR 274

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
               + ++ +  TY +LI  Y  +G+  EA ++++ ML  G+  D  + +++  +
Sbjct: 275 LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISW 329



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 56/107 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A +L  ++   G+  DI TY T++ G C   +++EA+ L  ++    L  + +
Sbjct: 507 KKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIV 566

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
           T+T +I    KEGR ++A  ++ +M+  G   +   Y+ L+    K+
Sbjct: 567 TYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHKT 613


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 126/206 (61%), Gaps = 6/206 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ ++  +G+ PD++TYN +I G+C + ++ +A  LF K+    + PN  TF I
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI 287

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCKE R+ +A  + + M+++G K +V TY+ L+D Y   + +  A  ++  + +  
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++PNI SYSI+I G CK   ++EA+  F   HC   N+++PDVVTY  LI G CK G+ +
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHC---NNIIPDVVTYNSLIDGLCKLGKIS 404

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A++L D M   G+  D +  +++ D
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILD 430



 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 119/201 (59%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L  ++  + ++P+++ YNTII   C +  ++EA  L+ ++    + P+ +T+  LI
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G+M DAT +F+KM+ +    NV T++ L+DG+ K + +K A +V   M +  I 
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++ +Y+ L+D  C    + +A + F+      + P++ +Y+I+I G+CK  +  EAM L
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL 374

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M  N I+PD +  ++L D
Sbjct: 375 FKEMHCNNIIPDVVTYNSLID 395



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 118/202 (58%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  ++ RG+ P+I +Y+ +I G+C + ++DEA+ LF+++ C  + P+
Sbjct: 329 LVKE--VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G++  A  +  +M ++G   + +TY+ ++D   K+  +  A  +  
Sbjct: 387 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I P+I +Y+ L+DGLCK G +E+A   F   L    + DV  Y  +I+G+C  G
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              E++ L   M  NG +P+ +
Sbjct: 507 LFDESLDLLSKMEENGCIPNAV 528



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 111/200 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +  +  ++   G EP++IT  T+I G C   ++ +A+Q  +K+  +    N +++  LI+
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+   A  +  ++  K  + NVV Y+ +ID   K + +  AFD+Y EM    ISP
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ LI G C  G M++A   F+  +  ++ P+V T+ IL+ G+CK  R  EA  + 
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M++ GI PD    ++L D
Sbjct: 306 AMMMKQGIKPDVFTYNSLMD 325



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 101/209 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    + L  Q+   G+  D++  + +I  +  L +   +  +  K+  +  +PN
Sbjct: 82  LVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPN 141

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT T LI   C +G++  A     K++  G   N V+Y  LI+G  K     +A  +  
Sbjct: 142 VITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLR 201

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    + PN+V Y+ +ID +CK  L+ EA   +   +   + PDVVTY  LI G+C  G
Sbjct: 202 RVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVG 261

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A  L++ M+   I P+    + L D
Sbjct: 262 KMKDATDLFNKMIFENINPNVYTFNILVD 290



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 106/191 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++    + PD++TYN++I G C L ++  A++L +++    +  + IT+  
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK  ++D A  + +KM ++G + ++ TY+ L+DG  K+  ++ A  V+E++    
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++  Y+ +I G C  GL +E+L       +N  +P+ VTY I+I          +A 
Sbjct: 488 YILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAE 547

Query: 188 QLYDSMLRNGI 198
           +L   M+  G+
Sbjct: 548 KLLREMITRGL 558



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 82/184 (44%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  +  +P I  +  I+      N     V L  ++    +  + +  +ILI+ F + G+
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              +  + +K+L+ G + NV+T + LI G      +  A   ++++       N VSY  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI+GLCK G    AL          + P+VV Y  +I   CK     EA  LY  M+  G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 198 IMPD 201
           I PD
Sbjct: 243 ISPD 246



 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 41/129 (31%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------- 54
           L K   +D A+ L  ++ D G++PDI TY T++ G C   RL++A  +FE L        
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491

Query: 55  -------------------------------CVQLKPNSITFTILIDAFCKEGRMDDATM 83
                                          C+   PN++T+ I+I +   +   D A  
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI---PNAVTYEIIICSLFDKDENDKAEK 548

Query: 84  MFSKMLEKG 92
           +  +M+ +G
Sbjct: 549 LLREMITRG 557


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  ALK+F +L ++GL PD+ TY+++I G+C    +++A +L +++    + PN
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D  CK G +  A  +F  M EKG + + VTYS +IDGY KS+N+  AF ++ 
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+   Y+ L+ G CK G ME+A+  F   L        +++  LI GYCK+ 
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC 801

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA QL+  M+   IMPD +  +T+ D++ ++   +E
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 840



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 112/206 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A K F ++ D GL P+   Y  +I G+     L EA+ +F +L  + + P+  
Sbjct: 555 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQ 614

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T +  I    K GR+ +A  +FS++ EKG   +V TYS LI G+ K   ++ AF++++EM
Sbjct: 615 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 674

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C   I+PNI  Y+ L+DGLCK G ++ A   F    +  L PD VTY+ +I GYCK+   
Sbjct: 675 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 734

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA  L+  M   G+ P   + + L 
Sbjct: 735 AEAFSLFHEMPSKGVQPHSFVYNALV 760



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 111/206 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  ++ A +L   ++  G+ PDI  YN II       +++EA     ++    LKP+++T
Sbjct: 486 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 545

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F   I  + K G+M +A   F +ML+ G   N   Y+ LI+G+FK+ N+  A  ++  + 
Sbjct: 546 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLH 605

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              + P++ + S  I GL K G ++EAL  F    +  L+PDV TY+ LI G+CK G   
Sbjct: 606 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 665

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +A +L+D M   GI P+  + + L D
Sbjct: 666 KAFELHDEMCLKGIAPNIFIYNALVD 691



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 1/218 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K  +L  AL +F +L   G+ PD+ T +  I G     R+ EA+++F +L    L P+ 
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ LI  FCK+G ++ A  +  +M  KG   N+  Y+ L+DG  KS +++ A  +++ 
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+ V+YS +IDG CK   + EA   FH      + P    Y  L+ G CK G 
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +AM L+  ML+ G     L  +TL D   +S   QE
Sbjct: 769 MEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQE 805



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 107/197 (54%), Gaps = 1/197 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A+ LF ++  +G     +++NT+I GYC   ++ EA QLF+++   Q+ P+ +
Sbjct: 765 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 823

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G+M++A ++F +M E+    + VTY+ L+ GY K       F ++E+M
Sbjct: 824 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 883

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V+Y ++I   CK   + EA       +   +L     + +LI   CK    
Sbjct: 884 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 943

Query: 184 TEAMQLYDSMLRNGIMP 200
           TEA +L D M   G+ P
Sbjct: 944 TEASKLLDEMGELGLKP 960



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 107/202 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++  ++ ++GL P+   Y+ +I G C +  +DEAV+L   +    L PN
Sbjct: 238 LCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPN 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+TI+    C+  RM++A + F +M + G K +    S LIDG+ +  ++     + +
Sbjct: 298 TYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKD 357

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I  N+++Y++LI GLCK G ME+A       +     P+  T+ +LI GYC+  
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
               A++L D M +  ++P  +
Sbjct: 418 NMGRALELLDEMEKRNLVPSAV 439



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 59/241 (24%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP------- 60
           +D A++L   + ++GL P+  TY  I  G C   R++EA   FE++    LKP       
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 61  ----------------------------NSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
                                       N IT+ +LI   CK G+M+ A  +   M+  G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            K N  T+  LI+GY +  NM  A ++ +EM + N+ P+ VSY  +I+GLC         
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC--------- 449

Query: 153 YAFHC---ALDNHLL---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
              HC   +L N LL         P+VV Y+ILI  Y   GR  EA +L D M  +G+ P
Sbjct: 450 ---HCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAP 506

Query: 201 D 201
           D
Sbjct: 507 D 507



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 35/254 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  +D  L++   +   G+  ++ITYN +I G C   ++++A ++ + +  +  KPN
Sbjct: 343 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPN 402

Query: 62  SITFTILIDAFCKEGRMDDATMMF-------------------------------SKMLE 90
           S TF +LI+ +C+E  M  A  +                                +K+LE
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462

Query: 91  K----GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           K    G K NVV YS LI  Y     ++ A  + + M  + ++P+I  Y+ +I  L K G
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            MEEA           L PD VT+   I GY K G+ TEA + +D ML +G+MP+  L +
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 582

Query: 207 TLADYNLQSSGSQE 220
            L + + ++    E
Sbjct: 583 VLINGHFKAGNLME 596



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  AL+L  ++  R L P  ++Y  +I G C    L  A +L EK+T   LKPN +
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 474

Query: 64  TFTILIDAFCKEGRMDDATMMFSKM--------------------------------LE- 90
            ++ILI A+  EGR+++A  +   M                                LE 
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534

Query: 91  --KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G K + VT+   I GY K+  M  A   ++EM ++ + PN   Y++LI+G  K G +
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 594

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EAL  F       +LPDV T +  I G  K GR  EA++++  +   G++PD    S+L
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 100/200 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++   K++  + D  +  D+ TY  ++   C    L  A ++  ++    L PN
Sbjct: 203 LLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN 262

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++++I+  C+ G +D+A  +   M EKG   N  TY+ +  G  +++ M  A   +E
Sbjct: 263 EFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFE 322

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + P+  + S LIDG  + G ++E L      +   +  +++TY +LI G CK G
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFG 382

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A ++   M+  G  P+
Sbjct: 383 KMEKAAEILKGMVTLGCKPN 402



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 87/173 (50%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++ A  LF ++ +R L  D +TY +++ GY  L +  E   LFEK+    +KP+ +
Sbjct: 834  KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ ++I A CKE  + +A  +  +++ KG       +  LI    K +++  A  + +EM
Sbjct: 894  TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             E  + P++ + + L+    + G M+EA   F       L+PD  T   L+ G
Sbjct: 954  GELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI-----LIDAFCKEGRMDDAT 82
           + ++ +I  Y  +  LDEA  +F        K +SI  ++     L+    K G M+   
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVF-----FVAKNDSILISLIRCNSLLKDLLKCGMMELFW 213

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +++ ML+     +V TY+ L+    K+ +++ A  V  EM E  ++PN   YS++I+G+
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGM 273

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C+ G ++EA+       +  L+P+  TY I+  G C+A R  EA   ++ M + G+ PD 
Sbjct: 274 CQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY 333

Query: 203 LLLSTLAD 210
              S L D
Sbjct: 334 NACSALID 341



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 60/120 (50%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            KE +L  A KL  ++  +G+      ++ +I   C    L EA +L +++  + LKP+  
Sbjct: 904  KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
                L+ +F + G+MD+AT +F  +   G   +  T   L++G     + + A ++ +++
Sbjct: 964  ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 46/88 (52%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   L  A KL  ++ + GL+P +   NT++  +    ++DEA ++FE +  + L P+
Sbjct: 937  LCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKML 89
            + T   L++    +   +DA  +  +++
Sbjct: 997  TTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 122/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A K+F ++   GL PD ++YNT++ GYC    L EA+ +F ++    + P+
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI A C+ G ++ A  +  +M E+G + N  T++ LIDG+ ++  +  A    +
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I P++V Y++LI+G CK G M+EA    H      + PDVVTY+ ++ GYCK G
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +L   ML+ G++PD +  S+L
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSL 441



 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 129/214 (60%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ A+ L GQ+ +RGL  +  T+  +I G+C    LD+A+   +++   +++P+ + + 
Sbjct: 310 NLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI+ +CK GRMD+A  +  +M  KG K +VVTYS ++ GY K  +  SAF++  +M + 
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK 429

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+ ++YS LI GLC+   + +A   F   L   L PD  TY  LI G+CK G   +A
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + L+D M++ G++PD +  S L D   +S+ ++E
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKE 523



 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 120/201 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA +L G + + G+ P ++T+NT++ G C   R+++A ++F+++    L P+ +++  
Sbjct: 206 VDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNT 265

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  +CK G + +A  +F++M +KG   +VVT++ LI    ++ N++ A  +  +M E  
Sbjct: 266 LVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERG 325

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N  +++ LIDG C+ G +++AL A     +  + P VV Y +LI GYCK GR  EA 
Sbjct: 326 LRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAR 385

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L   M   G+ PD +  ST+
Sbjct: 386 ELIHEMEAKGMKPDVVTYSTI 406



 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 119/213 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL +F ++  +G+ PD++T+ ++I   C    L+ AV L  ++    L+ N  TFT 
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FC+ G +DDA +   +M E   + +VV Y+ LI+GY K   M  A ++  EM    
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS ++ G CK G  + A       L   ++PD +TY+ LIRG C+  R  +A 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +L++ ML+ G+ PD    +TL D + +    Q+
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 115/196 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL    ++ +  ++P ++ YN +I GYC L R+DEA +L  ++    +KP+ +T++ 
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  +CK G  D A  +  KML+KG   + +TYS LI G  + + +  A +++E+M +  
Sbjct: 406 ILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y+ LIDG CK G +++AL      +   +LPDVVTY++LI G  K+ R  EA 
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525

Query: 188 QLYDSMLRNGIMPDGL 203
           +L   +     +PD +
Sbjct: 526 RLLFKLYYEDPVPDNI 541



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 15/208 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D+A +L  ++  +G+ PD ITY+++I G C   RL +A +LFEK+  + L+P+  T+T L
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-----YEEM 123
           ID  CKEG +  A  +  +M++KG   +VVTYS LIDG  KS   K A  +     YE+ 
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 124 CENNI----------SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             +NI          +    S   L+ G   +GLM +A   +   LD H   D   Y++L
Sbjct: 537 VPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVL 596

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           I G+C+ G   +A+  +  +LR G  P+
Sbjct: 597 IHGHCRGGNIMKALSFHKQLLRCGFSPN 624



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 1/211 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLK 59
           + + +  L +A +L   +   G+ P++ TYN ++   C+  + +EA+ +  + +      
Sbjct: 128 LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCA 187

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN +T+  L+ AFC+ G +D A  +   M E G + ++VT++ +++G  K+  M+ A  +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    ++P+ VSY+ L+ G CK G + EAL  F       ++PDVVT+  LI   C+
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AG    A+ L   M   G+  +    + L D
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALID 338


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 7/200 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PDI++YNTII G C   RL++AV L  ++     +PNS T+ IL+D  CKEGR+++A  +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M  KG + +VV YS LI G+     +     +++EM E  ISPN+V YS LI+G CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +GL  EA    H   +  + PDV TY  +I G CK GR  +A+ L+D M   G  P    
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEP---- 183

Query: 205 LSTLADYNLQSSG-SQEHCI 223
             +   YN+  +G  +E CI
Sbjct: 184 --STVTYNVLINGLCKEGCI 201



 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 126/209 (60%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A++L G++  +GLE D++ Y+T+I G+CS   LD    LF+++    + PN
Sbjct: 55  LCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPN 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LI+ FCK+G   +AT +   M E+G + +V TY+C+I G  K    + A D+++
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P+ V+Y++LI+GLCK G + +A   F   L+     +VV+Y  LI G C  G
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234

Query: 182 RPTEAMQLYDSMLRNG--IMPDGLLLSTL 208
           +  EAM+L+ S+L +G  + PD +  +T+
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTV 263



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 2/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLK 59
           L KE  +  A K+F  + ++G   ++++YNT+I G C+  +LDEA++LF  L      ++
Sbjct: 195 LCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVE 254

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ ITF  +I   CKEGR+D A  ++  M+E+G   N+ T   LI  Y KS  +  A ++
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++ + +  + P+  +YS++IDG CK  ++  A   F     + L P +  Y  L+   CK
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
                +A +L+  M  +   PD +  + + D  L++ 
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAG 411



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 120/238 (50%), Gaps = 37/238 (15%)

Query: 8   LDAALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKL----------TC 55
           LD A+KLF  L + G  +EPD+IT+NT+I G C   RLD+AV++++ +          TC
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTC 295

Query: 56  -------------------------VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                    + L P+S T++++ID FCK   ++ A  +FS+M  
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G    +  Y+ L+    K  +++ A  +++EM E+N  P+ +S++I+IDG  K G +  
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A    +      L PD  TY+  I    K G+  EA   +DSM+ +GI PD  +  +L
Sbjct: 416 AKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSL 473



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 106/199 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   +D A++L+ ++   GL P   TY+ +I G+C ++ L+ A  LF ++    L P  
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  L+ + CKE  ++ A  +F +M E   + + ++++ +IDG  K+ ++ SA ++  +
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  ++P+  +YS  I+ L K G MEEA  AF   + + + PD   Y  LI+G+     
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE 482

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             E + L   M   G++ D
Sbjct: 483 IEEVINLLRQMADMGVILD 501



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           + + P+ +++  +I+  CKE R++ A  +  +M     + N  TY  L+DG  K   ++ 
Sbjct: 4   INILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEE 63

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  +  EM    +  ++V YS LI G C +G ++     F   L+  + P+VV Y+ LI 
Sbjct: 64  AMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD 201
           G+CK G   EA  +  +M   GI PD
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPD 149



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 86/182 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF ++   GL P +  YNT++   C  + L++A +LF+++     +P++I+F I
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G +  A  + + M + G   +  TYS  I+   K   M+ A   ++ M  + 
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P+   Y  LI G      +EE +       D  ++ D+     ++   C +      M
Sbjct: 463 ITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVM 522

Query: 188 QL 189
           +L
Sbjct: 523 EL 524



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 63/127 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ A +LF ++ +   EPD I++N +I G      +  A +L   +  + L P+
Sbjct: 372 LCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPD 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++  I+   K G+M++A   F  M+  G   +   Y  LI G+  +  ++   ++  
Sbjct: 432 AYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLR 491

Query: 122 EMCENNI 128
           +M +  +
Sbjct: 492 QMADMGV 498


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 127/217 (58%), Gaps = 1/217 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A+KL G +T RG +PD+ T+NT++  YC+L +++E   L +++    L+P+ +
Sbjct: 286 KDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIV 345

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  +ID  CK   +  A    ++++++G K NV  Y+ LI GY ++ ++  A D  E M
Sbjct: 346 SYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETM 405

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I P  V+Y  L+  +C  GL+EEA   F  A +N++   V+ Y I+I+GYCK G+ 
Sbjct: 406 KSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKM 465

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA+  ++ M   GI P+ L  +TL  Y    SG+ E
Sbjct: 466 VEAVAYFEEMRSRGISPNKLTYTTLM-YAYSKSGNSE 501



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 102/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++    L  Q+   GL+PDI++Y TII G+C    + +A +   +L    LKPN   +  
Sbjct: 325 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 384

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  + + G +  A      M   G +   VTY  L+     +  ++ A  ++ +  ENN
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 444

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +   ++ Y+I+I G CK G M EA+  F       + P+ +TY  L+  Y K+G   EA 
Sbjct: 445 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 504

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+D M+ +G++PD +   TL
Sbjct: 505 KLFDEMVGSGVIPDNITYGTL 525



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 99/195 (50%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           +Y  +I   C   ++D   ++  +L    L+P  +T+ +L+DA CK GR+++A  +  +M
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            + G   +VVT+  LI+G  + +       V +EM +  +SPN V Y+ LI   C++G  
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +AL  F   +   + P  VTY ++ +  CK G    A ++ + ML  G+     L +T+
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 192

Query: 209 ADYNLQSSGSQEHCI 223
             + LQ +   E  +
Sbjct: 193 VAWLLQRTRRLESVV 207



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 1/173 (0%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +L DRGL+P++  YN +I GY     +  A+   E +    ++P ++T+  L+   C  G
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +++A  +FS+  E      V+ Y+ +I GY K   M  A   +EEM    ISPN ++Y+
Sbjct: 429 LVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYT 488

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI-RGYCKAGRPTEAMQ 188
            L+    K G  EEA   F   + + ++PD +TY  LI R   K G+ T+  Q
Sbjct: 489 TLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKTTQYGQ 541



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 17/225 (7%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPD--IIT------------YNTIICGYCSLNR---L 43
           +L +   L++ + +  ++  RG+ P+  ++T               +   + +LN+   +
Sbjct: 196 LLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYM 255

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
            EA ++ + +    ++ +SIT+ I+I   CK+ +M++A  +   M  +G K ++ T++ L
Sbjct: 256 KEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 315

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           +  Y     M+  F + ++M    + P+IVSY  +IDG CK   + +A       +D  L
Sbjct: 316 LHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGL 375

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            P+V  Y  LI GY + G  + A+   ++M  NGI P  +   +L
Sbjct: 376 KPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 420



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 36/232 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DA  ++  +L   GL+P ++TYN ++   C   R++EA +L  ++    + P+
Sbjct: 21  LCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS 80

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILI+   +  R  +  ++  +M + G   N V Y+ LI  + +  +   A  +++
Sbjct: 81  VVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFD 140

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALY----------AFHCALDNHLLPDV---- 167
           EM    + P  V+Y+++   LCK G ME A              HC L N ++  +    
Sbjct: 141 EMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRT 200

Query: 168 --------VTYAILIRGY--------------CKAGRPTEAMQLYDSMLRNG 197
                   +T  ++ RG               CK G+  EA+ ++   L  G
Sbjct: 201 RRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 252



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 79/149 (53%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  ++T +I A CK G++D    M +++   G +  VVTY+ L+D   KS  ++ AF + 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +  ++P++V++ ILI+GL +     E            + P+ V Y  LI  +C+ 
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           G  ++A++L+D M+   + P  +  + +A
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIA 158



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 3/163 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+     +   G++P  +TY +++   C    ++EA  +F +     +    I +TI
Sbjct: 395 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 454

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +CK G+M +A   F +M  +G   N +TY+ L+  Y KS N + A  +++EM  + 
Sbjct: 455 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 514

Query: 128 ISPNIVSYSILIDGLC--KRGLMEEALYAFHCALDNHLLPDVV 168
           + P+ ++Y  LI   C  K G   +     HC L   L  D +
Sbjct: 515 VIPDNITYGTLI-ARCSEKGGKTTQYGQELHCDLSKLLSADWI 556



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N++ N  SY+ +I  LCK G ++             L P VVTY +L+   CK+GR  EA
Sbjct: 6   NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEA 65

Query: 187 MQLYDSMLRNGIMPD----GLLLSTLA 209
            +L   M + G+ P     G+L++ LA
Sbjct: 66  FRLKGRMEQGGMTPSVVTFGILINGLA 92


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 125/222 (56%), Gaps = 1/222 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A +  G +   G++P+++TYNTII GYCS  R++ A  +F+ + C  +KP
Sbjct: 200 VLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKP 259

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S T+   I   CKEG++++A+ M  KM E G +   VTY+ LIDGY    N++ AFD  
Sbjct: 260 DSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYR 319

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M    + P + +Y++LI  L     M+EA        +  L+PD VTY ILI GYC+ 
Sbjct: 320 DKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRC 379

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G   +A  L+D M+  GI P  +  ++L  Y L   G  +  
Sbjct: 380 GNVKKAFTLHDEMISKGIQPTRVTYTSLI-YVLSKRGRMKQA 420



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +C +D A  +  +++++GL PD +TYN +I GYC    + +A  L +++    ++P 
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    K GRM  A  +F K++ KG   +++ ++ LIDG+  + NM  AF + +
Sbjct: 401 RVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK 460

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + P+ V+++ L+ G C+ G +E A           + PD ++Y  LI GY K G
Sbjct: 461 EMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRG 520

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A ++ D ML  G  P      TL  YN
Sbjct: 521 DMKDAFRVRDEMLSIGFNP------TLLTYN 545



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  +  ++ + GL P  +TYNT+I GYC+   L+ A    +K+    L P   
Sbjct: 273 KEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVS 332

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI A   + +MD+A  +  +M EKG   + VTY+ LI+GY +  N+K AF +++EM
Sbjct: 333 TYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEM 392

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P  V+Y+ LI  L KRG M++A   F   +   + PD++ +  LI G+C  G  
Sbjct: 393 ISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNM 452

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  +   M +  ++PD +  +TL
Sbjct: 453 DRAFAMLKEMDQMKVVPDEVTFNTL 477



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 10/217 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LI+ C      D A + F  +  +G+ P +   N ++  +   NR ++A  L+ ++  +
Sbjct: 126 LLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRM 185

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++K + +TF I+I+  CKEG++  A      M   G K NVVTY+ +I GY     ++ A
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA 245

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +++ M    + P+  +Y   I G+CK G +EEA        +  L P  VTY  LI G
Sbjct: 246 RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDG 305

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           YC  G    A    D M+R G+MP      T++ YN+
Sbjct: 306 YCNKGNLEMAFDYRDKMVREGLMP------TVSTYNM 336



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 98/176 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +  A  LF ++  +G+ PD+I +N +I G+C+   +D A  + +++  +++ P
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVP 469

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  L+   C+EG+++ A  +  +M  +G K + ++Y+ LI GY K  +MK AF V 
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           +EM     +P +++Y+ LI GLCK    + A       +   + P+  TY  LI G
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 90/183 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + Y+ +I   C L R D+A + F+ +    + P+      ++  F K  R + A +++++
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M     K++VVT++ +I+   K   +K A +    M    I PN+V+Y+ +I G C RG 
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +E A   F       + PD  TY   I G CK G+  EA  + + M   G+ P  +  +T
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 208 LAD 210
           L D
Sbjct: 302 LID 304



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 75/136 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A  +  ++    + PD +T+NT++ G C   +++ A +L E++    +KP+ I++ 
Sbjct: 451 NMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYN 510

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  + K G M DA  +  +ML  G    ++TY+ LI G  K++    A  + +EM   
Sbjct: 511 TLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISK 570

Query: 127 NISPNIVSYSILIDGL 142
            I+PN  +Y  LI+G+
Sbjct: 571 GITPNDNTYLSLIEGI 586


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 10/214 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICG----------YCSLNRLDEAVQLFEKLTCV 56
           H+ +A  +  ++   G +P+ IT NT+I G          +C + +L +AV LF K+   
Sbjct: 112 HIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILE 171

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            + P+  TFTIL+D FCKEGR+ +A  + + M+ +G K  VVTY+ L+DGYF  + +  A
Sbjct: 172 NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKA 231

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             ++  M +  +SP+I SYSILI+G CK  +M+EA+          ++P+VVTY+ LI G
Sbjct: 232 KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDG 291

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            CK+G+ + A++L D M   G  P+ +  S++ D
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 117/201 (58%), Gaps = 2/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+  ++ A  +F  +   G+ PDI +Y+ +I G+C +  +DEA++L +++   Q+ PN
Sbjct: 224 LVKQ--VNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK G++  A  +  +M ++G   N+VTYS ++D   K+  + +A  +  
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I PN+ +Y+ILI GLC+ G +E+A   F   L      +V TY ++I+G+C  G
Sbjct: 342 QMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
              EA+ L   M  NG +P+ 
Sbjct: 402 LFDEALTLLSKMEDNGCIPNA 422



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 114/194 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +  +G++P ++TYN+++ GY  + ++++A  +F  +  + + P+  
Sbjct: 189 KEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQ 248

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ILI+ FCK   MD+A  +  +M  K    NVVTYS LIDG  KS  +  A  + +EM
Sbjct: 249 SYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEM 308

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PNIV+YS ++D LCK   ++ A+       +  + P++ TY ILI+G C++G+ 
Sbjct: 309 HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKL 368

Query: 184 TEAMQLYDSMLRNG 197
            +A ++++ +L  G
Sbjct: 369 EDARKVFEDLLVKG 382



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 10/204 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L  +   P  I +N I+            + L +K+    +KPN +   I
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG----------YFKSQNMKSAF 117
           LI++FC+ G +  A  + +K+L+ G K N +T + LI G          +     +K A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           D++ +M   NI+P++ +++IL+DG CK G ++EA       +   + P VVTY  L+ GY
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
               +  +A  ++++M + G+ PD
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPD 246



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 83/150 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  ALKL  ++ DRG  P+I+TY++I+   C  +++D A+ L  ++    ++PN
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPN 351

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILI   C+ G+++DA  +F  +L KG   NV TY+ +I G+        A  +  
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLS 411

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M +N   PN  +Y I+I  L K+   E A
Sbjct: 412 KMEDNGCIPNAKTYEIIILSLFKKDENEMA 441



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  Q+ ++G++P++ TY  +I G C   +L++A ++FE L       N
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLN 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T++I  FC +G  D+A  + SKM + G   N  TY  +I   FK    + A  +  
Sbjct: 387 VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRG 146
           EM E N    +   + LI  +   G
Sbjct: 447 EMIETNFDGRVALTNDLIASIWVTG 471


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 127/219 (57%), Gaps = 1/219 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A+KL G +T RG +PD+ T+NT++  YC+L +++E   L +++    L+P+ +
Sbjct: 514 KDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIV 573

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  +ID  CK   +  A    ++++++G K NV  Y+ LI GY ++ ++  A D  E M
Sbjct: 574 SYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETM 633

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I P  V+Y  L+  +C  GL+EEA   F  A +N++   V+ Y I+I+GYCK G+ 
Sbjct: 634 KSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKM 693

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            EA+  ++ M   GI P+ L  +TL  Y    SG+ E  
Sbjct: 694 VEAVAYFEEMRSRGISPNKLTYTTLM-YAYSKSGNSEEA 731



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 102/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++    L  Q+   GL+PDI++Y TII G+C    + +A +   +L    LKPN   +  
Sbjct: 553 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  + + G +  A      M   G +   VTY  L+     +  ++ A  ++ +  ENN
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +   ++ Y+I+I G CK G M EA+  F       + P+ +TY  L+  Y K+G   EA 
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 732

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+D M+ +G++PD +   TL
Sbjct: 733 KLFDEMVGSGVIPDNITYGTL 753



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 115/223 (51%), Gaps = 1/223 (0%)

Query: 2   LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L++   LDAA ++F ++ + R +  +  +Y  +I   C   ++D   ++  +L    L+P
Sbjct: 195 LVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQP 254

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +T+ +L+DA CK GR+++A  +  +M + G   +VVT+  LI+G  + +       V 
Sbjct: 255 TVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVL 314

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  +SPN V Y+ LI   C++G   +AL  F   +   + P  VTY ++ +  CK 
Sbjct: 315 QEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKE 374

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           G    A ++ + ML  G+     L +T+  + LQ +   E  +
Sbjct: 375 GEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVV 417



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ ++ +  ++GL  ++ T N +I G C    + EA ++ + +    ++ +SIT+ I+I 
Sbjct: 451 AVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIR 510

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+ +M++A  +   M  +G K ++ T++ L+  Y     M+  F + ++M    + P
Sbjct: 511 GCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQP 570

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IVSY  +IDG CK   + +A       +D  L P+V  Y  LI GY + G  + A+   
Sbjct: 571 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV 630

Query: 191 DSMLRNGIMPDGLLLSTL 208
           ++M  NGI P  +   +L
Sbjct: 631 ETMKSNGIQPTNVTYGSL 648



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 6/201 (2%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +L DRGL+P++  YN +I GY     +  A+   E +    ++P ++T+  L+   C  G
Sbjct: 597 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 656

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +++A  +FS+  E      V+ Y+ +I GY K   M  A   +EEM    ISPN ++Y+
Sbjct: 657 LVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYT 716

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L+    K G  EEA   F   + + ++PD +TY  LI       R +E   L   +   
Sbjct: 717 TLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI------ARCSEVNSLDKDIGHT 770

Query: 197 GIMPDGLLLSTLADYNLQSSG 217
             +  G L      YN+ S+G
Sbjct: 771 AELSSGALTKDDRMYNILSNG 791



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITFTILI 69
           A   F  L+ RG  P I T N  +       +LD A ++F+++     +  N  ++T +I
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A CK G++D    M +++   G +  VVTY+ L+D   KS  ++ AF +   M +  ++
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V++ ILI+GL +     E            + P+ V Y  LI  +C+ G  ++A++L
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 190 YDSMLRNGIMPDGLLLSTLADYNL 213
           +D M+   + P      T   YNL
Sbjct: 349 FDEMVLKKMKP------TAVTYNL 366



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 97/208 (46%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   L++ + +  ++  RG+ P+       +   C   +  EAV ++ K     L  
Sbjct: 406 LLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGV 465

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T   LI   C+   M +AT +   ML KG + + +TY+ +I G  K   M+ A  ++
Sbjct: 466 NLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLH 525

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M      P++ +++ L+   C  G MEE  +         L PD+V+Y  +I G+CKA
Sbjct: 526 GDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKA 585

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +A +    ++  G+ P+  + + L
Sbjct: 586 KDIRKAKEYLTELMDRGLKPNVFIYNAL 613



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 69/132 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+     +   G++P  +TY +++   C    ++EA  +F +     +    I +TI
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 682

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +CK G+M +A   F +M  +G   N +TY+ L+  Y KS N + A  +++EM  + 
Sbjct: 683 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 742

Query: 128 ISPNIVSYSILI 139
           + P+ ++Y  LI
Sbjct: 743 VIPDNITYGTLI 754


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 126/209 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A   + ++  RG+ PD+ITY+T+ICG+C   +L  A  L  ++T   + P+
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPD 341

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILIDA CKEG++ +A  +   M ++G K NVVTYS L+DGY     + +A  ++ 
Sbjct: 342 VYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++P++ SY+I+I+GLCK   ++EA+      L  +++P+ VTY  LI G CK+G
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R T A+ L   +   G   D +  ++L D
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLD 490



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ E H   A ++F  +    + P + +YN +I G C    +DEA+ L  ++    + PN
Sbjct: 389 LVGEVH--NAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LID  CK GR+  A  +  ++  +G  A+V+TY+ L+DG  K+QN+  A  ++ 
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I PN  +Y+ LIDGLCK   ++ A   F   L      DV TY ++I G CK G
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEG 566

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              EA+ +   M  NG +PD +
Sbjct: 567 MLDEALAMKSKMEDNGCIPDAV 588



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 109/198 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++  + + P+ +TYN++I G C   R+  A+ L ++L       +
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPAD 481

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+T L+D  CK   +D A  +F KM E+G + N  TY+ LIDG  K   +K+A  +++
Sbjct: 482 VITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQ 541

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +       ++ +Y+++I GLCK G+++EAL       DN  +PD VT+ I+IR   +  
Sbjct: 542 HILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKD 601

Query: 182 RPTEAMQLYDSMLRNGIM 199
              +A +L   M+  G++
Sbjct: 602 ENDKAEKLLHEMIAKGLL 619



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A+ L  Q+  +G+EPD++T + +I  +C L ++  +  +  K+  +  +PN
Sbjct: 142 LVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPN 201

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I  T L+   C +G +  +     K++ +G + N V+Y  L++G  K    + A  +  
Sbjct: 202 TIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLR 261

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKA 180
            + + +  P++V Y+ +IDGLCK  L+ EA Y F+  +++  + PDV+TY+ LI G+C A
Sbjct: 262 MIEDRSTRPDVVMYNTIIDGLCKDKLVNEA-YDFYTEMNSRGIFPDVITYSTLICGFCLA 320

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+   A  L + M    I PD    + L D
Sbjct: 321 GQLMGAFSLLNEMTLKNINPDVYTYTILID 350



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 113/210 (53%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  +L    ++  +G + + ++Y T++ G C +     A++L   +     +P+ + +  
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+  +++A   +++M  +G   +V+TYS LI G+  +  +  AF +  EM   N
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +Y+ILID LCK G ++EA           + P+VVTY+ L+ GYC  G    A 
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           Q++ +M++  + P      ++  YN+  +G
Sbjct: 398 QIFHAMVQTEVNP------SVCSYNIMING 421



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  + G++   G +P+ I   T++ G C    + +++   +K+     + N 
Sbjct: 178 CHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQ 237

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  L++  CK G    A  +   + ++  + +VV Y+ +IDG  K + +  A+D Y E
Sbjct: 238 VSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTE 297

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++++YS LI G C  G +  A    +     ++ PDV TY ILI   CK G+
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK 357

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L   M + G+ P+ +  STL D
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMD 385



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 1/200 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA  +  G L  R   P II +  I+     +     A+ L +++    ++P+ +T +IL
Sbjct: 115 DAVSQFNGMLLMRN-TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL 173

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC  G+M  +  +  K+L+ G + N +  + L+ G      +K +   ++++     
Sbjct: 174 INCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGF 233

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             N VSY  L++GLCK G    A+       D    PDVV Y  +I G CK     EA  
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
            Y  M   GI PD +  STL
Sbjct: 294 FYTEMNSRGIFPDVITYSTL 313



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/241 (17%), Positives = 91/241 (37%), Gaps = 51/241 (21%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK------ 74
           +G+ P+++T + +I     L ++  +  +  K+  +  +PNSIT T L+    +      
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLP 64

Query: 75  ---EGR------------------------------------------MDDATMMFSKML 89
              E R                                          + DA   F+ ML
Sbjct: 65  RMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGML 124

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                 +++ +  ++    K ++  +A  + ++M    I P++V+ SILI+  C  G M 
Sbjct: 125 LMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMA 184

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            +       L     P+ +    L++G C  G   +++  +D ++  G   + +   TL 
Sbjct: 185 FSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLL 244

Query: 210 D 210
           +
Sbjct: 245 N 245


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 122/200 (61%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++T +G+  D++TY T+I G+C  ++L EA+ L  ++    + PN  T+ IL+D
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG++ +A  + + ML+   K +V+TYS L+DGYF    +K A  V+  M    ++P
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ SY+ILI+G CK  +++EAL  F      +++P +VTY+ LI G CK+GR +    L 
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   GI  + +  ++L D
Sbjct: 398 DEMRDRGIPANVITYNSLID 417



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 112/196 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +F  ++  G+ PD+ +Y  +I G+C    +DEA+ LF+++    + P  +T++ 
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+     +  +M ++G  ANV+TY+ LIDG  K+ ++  A  ++ +M +  
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P   +++IL+DGLCK G +++A  AF   L      DV  Y ++I G+CK G   EA+
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEAL 499

Query: 188 QLYDSMLRNGIMPDGL 203
            +   M  NG +P+ +
Sbjct: 500 TMLSKMEENGCVPNAV 515



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 122/221 (55%), Gaps = 9/221 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +    ++PD+ITY+T++ GY  +  L +A  +F  ++ + + P+
Sbjct: 279 LCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TILI+ FCK   +D+A  +F +M +K     +VTYS LIDG  KS  +   +D+ +
Sbjct: 339 VHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I  N+++Y+ LIDGLCK G ++ A+  F+   D  + P   T+ IL+ G CK G
Sbjct: 399 EMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGG 458

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           R  +A + +  +L  G   D      +  YN+  +G   HC
Sbjct: 459 RLKDAQEAFQDLLTKGYHLD------VYKYNVMING---HC 490



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 108/195 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL    +L  +G++ D ++Y T+I G C +     A++L  K+     KPN   + 
Sbjct: 144 QVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYN 203

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  A+VVTY+ LI G+  +  +K A  +  EM   
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+ +Y+IL+D LCK G ++EA       L   + PDV+TY+ L+ GY       +A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M   G+ PD
Sbjct: 324 QHVFNAMSLMGVTPD 338



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 106/192 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++  + + P I+TY+++I G C   R+     L +++    +  N IT+  
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A  +F+KM ++G +    T++ L+DG  K   +K A + ++++    
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKG 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++  Y+++I+G CK+GL+EEAL       +N  +P+ VT+ I+I    K     +A 
Sbjct: 475 YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAE 534

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 535 KLLRQMICRGLL 546



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 106/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L  +L  +G++PD+IT N +I  +C + ++     +  K+     +P++ITFT
Sbjct: 74  HYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFT 133

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C +G+++ A     K+L +G K + V+Y  LI+G  K  + + A  +  ++   
Sbjct: 134 TLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR 193

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+  Y+ +ID LCK  L+ EA   F       +  DVVTY  LI G+C A +  EA
Sbjct: 194 LTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEA 253

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M+   I P+    + L D
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVD 277



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 85/150 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +     L  ++ DRG+  ++ITYN++I G C    LD A+ LF K+    ++P 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S TFTIL+D  CK GR+ DA   F  +L KG   +V  Y+ +I+G+ K   ++ A  +  
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M EN   PN V++ I+I+ L K+   ++A
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDENDKA 533



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 2/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A+  F ++      P II +N I+  +  +     AV L  +L    ++P+ IT  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+ FC  G++     + +K+L++G + + +T++ LI G      +  A   ++++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTE 185
            I  + VSY  LI+G+CK G    A+      +D  L  P+V  Y  +I   CK    +E
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVR-KIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  L+  M   GI  D +  +TL
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTL 240



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 86/172 (50%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           S+  +D+AV  F ++ C++  P  I F  ++D+F K      A  +  ++  KG + +++
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLI 95

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + LI+ +     +   F V  ++ +    P+ ++++ LI GLC +G + +AL+     
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L   +  D V+Y  LI G CK G    A++L   +      P+  + +T+ D
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 63/122 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ LF ++ D+G+ P   T+  ++ G C   RL +A + F+ L       +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLD 478

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ++I+  CK+G +++A  M SKM E G   N VT+  +I+  FK      A  +  
Sbjct: 479 VYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLR 538

Query: 122 EM 123
           +M
Sbjct: 539 QM 540


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 121/200 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++  +G+  D++TYNT+I G+C + +L EA+ L  ++    + PN  T+ IL+D
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG++ +A  + + ML+   K +V+TYS L+DGYF    +K A  V+  M    ++P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ILI+G CK  +++EAL  F      +++P +VTY+ LI G CK+GR +    L 
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G   D +  S+L D
Sbjct: 398 DEMRDRGQPADVITYSSLID 417



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 115/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A  +F  ++  G+ PD+ TY  +I G+C    +DEA+ LF+++    + P  +T++ 
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+     +  +M ++G  A+V+TYS LIDG  K+ ++  A  ++ +M +  
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PNI +++IL+DGLCK G +++A   F   L      +V TY ++I G+CK G   EA+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   M  NG +P+     T+
Sbjct: 500 TMLSKMEDNGCIPNAFTFETI 520



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 115/196 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +    ++PD+ITY+T++ GY  +  + +A  +F  ++ + + P+
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILI+ FCK   +D+A  +F +M +K     +VTYS LIDG  KS  +   +D+ +
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +     ++++YS LIDGLCK G ++ A+  F+   D  + P++ T+ IL+ G CK G
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A +++  +L  G
Sbjct: 459 RLKDAQEVFQDLLTKG 474



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 105/195 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L  +G + + ++Y T+I G C +     A++   K+     KP+ + + 
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYN 203

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  A+VVTY+ LI G+     +K A  +  EM   
Sbjct: 204 TIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK 263

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+ +Y+IL+D LCK G ++EA       L   + PDV+TY+ L+ GY       +A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M   G+ PD
Sbjct: 324 QHVFNAMSLMGVTPD 338



 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 108/196 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL LF ++  + + P I+TY+++I G C   R+     L +++       + I
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LID  CK G +D A  +F+KM ++  + N+ T++ L+DG  K   +K A +V++++
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                  N+ +Y+++I+G CK+GL+EEAL       DN  +P+  T+  +I    K    
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 184 TEAMQLYDSMLRNGIM 199
            +A +L   M+  G++
Sbjct: 531 DKAEKLLRQMIARGLL 546



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH+        +  ++  RG  PD +T NT+I G C   ++ +A+   +KL     + N 
Sbjct: 105 CHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  LI+  CK G    A     K+  +  K +VV Y+ +ID   K Q +  A+ ++ E
Sbjct: 165 VSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSE 224

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    IS ++V+Y+ LI G C  G ++EA+   +  +   + P+V TY IL+   CK G+
Sbjct: 225 MAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  +   ML+  + PD +  STL D
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMD 312



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L  +L  +G++PD+IT N +I  +C + ++     +  K+      P+++T  
Sbjct: 74  HYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLN 133

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C +G++  A     K+L +G + N V+Y+ LI+G  K  + ++A     ++   
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGR 193

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V Y+ +ID +CK  L+ EA   F       +  DVVTY  LI G+C  G+  EA
Sbjct: 194 LTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEA 253

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M+   I P+    + L D
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVD 277



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 81/144 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +     L  ++ DRG   D+ITY+++I G C    LD A+ LF K+   +++PN
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TFTIL+D  CK GR+ DA  +F  +L KG   NV TY+ +I+G+ K   ++ A  +  
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M +N   PN  ++  +I  L K+
Sbjct: 504 KMEDNGCIPNAFTFETIIIALFKK 527



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 2/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A+  F ++      P II +N I+  +  +     AV L  +L    ++P+ IT  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+ FC  G++     + +K+L++G   + VT + LI G      +K A   ++++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTE 185
               N VSY+ LI+G+CK G    A+  F   +D  L  PDVV Y  +I   CK    +E
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAI-KFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  L+  M   GI  D +  +TL
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTL 240



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 86/172 (50%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           S+  +D+AV  F ++ C++  P  I F  ++D+F K      A  +  ++  KG + +++
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + LI+ +     +   F V  ++ +    P+ V+ + LI GLC +G +++AL+     
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L      + V+YA LI G CK G    A++    +      PD ++ +T+ D
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ LF ++ D+ + P+I T+  ++ G C   RL +A ++F+ L       N
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ++I+  CK+G +++A  M SKM + G   N  T+  +I   FK      A  +  
Sbjct: 479 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 538

Query: 122 EM 123
           +M
Sbjct: 539 QM 540



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F  L  +G   ++ TYN +I G+C    L+EA+ +  K+      PN
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           + TF  +I A  K+   D A  +  +M+ +G
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARG 544


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 125/207 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   D A+KLF  +  +G  PD +TYN+I+ G    + +DEA ++F+K+      PN
Sbjct: 229 LYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I++   C+  ++DDA  +  +M + G   +VVTY+ L+DG  K+  +  A +++ 
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 348

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N  +P+IVSYS++++GLCK   + +A   F   ++  L+PDVVT+ IL+ G CKAG
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L D M  +G  PD +  +TL
Sbjct: 409 KLDEAKDLLDQMTCSGCAPDYVAYNTL 435



 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L    KLF Q+ D G+ PD I YN +I GY    R+DEA +L+E++  V L+P+  
Sbjct: 20  KQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIY 79

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEE 122
           T+  L++AFCKE +M +A  +F  M EKG + +VVTYS +I G  K+  +  A + ++ +
Sbjct: 80  TYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHK 139

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E   S N V+Y+ LI+GLCK   +E A            +PD +TY  ++ G C+ G+
Sbjct: 140 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGK 199

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +EA Q +DSM   G  PD +  + L D
Sbjct: 200 VSEAKQFFDSMPSRGYSPDVVAYNGLLD 227



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +++ A KL  ++  +G  PD ITYNTI+ G C + ++ EA Q F+ +      P+
Sbjct: 159 LCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD 218

Query: 62  SITFTILIDAFCKEGR-----------------------------------MDDATMMFS 86
            + +  L+DA  KEG+                                   MD+A  MF 
Sbjct: 219 VVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 278

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           KM+  G   N  TYS ++ G+ +++ +  A  V EEM +    P++V+Y+IL+DGLCK  
Sbjct: 279 KMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 338

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
           L+++A   F   +DN   PD+V+Y++++ G CK  +  +A  L+D M+   ++PD +  +
Sbjct: 339 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398

Query: 207 TLAD 210
            L D
Sbjct: 399 ILMD 402



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 1/189 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R   P+  T+  ++  +C   +L +  +LFE++    + P+ I + ILID + K+GR+D+
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  ++ +M+  G + ++ TY+ L++ + K   MK A ++++ M E    P++V+YS +I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 141 GLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           GLCK G + EAL   FH  ++     + V Y  LI G CK      A +L + M   G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 200 PDGLLLSTL 208
           PD +  +T+
Sbjct: 182 PDNITYNTI 190



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 71/278 (25%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A +L+ ++   GLEP I TYN+++  +C   ++ EA++LF+ +     +P+ +
Sbjct: 55  KKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVV 114

Query: 64  TFTILIDAFCKEGRMDDA-TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           T++ +I   CK G++ +A  M+F KM+E+G  AN V Y+ LI+G  K +N++ A+ + EE
Sbjct: 115 TYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEE 174

Query: 123 MCE-----NNI------------------------------SPNIVSYSILIDGLCKRGL 147
           M       +NI                              SP++V+Y+ L+D L K G 
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234

Query: 148 MEEALYAFHCALDNHLLPDVVTY-----------------------------------AI 172
            +EA+  F   +    +PD VTY                                   +I
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ G+C+A +  +A ++ + M + G +PD +  + L D
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 332



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 98/170 (57%), Gaps = 14/170 (8%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+  +++  G  PD++TYN ++ G C  N +D+A +LF  +      P+ +++++
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 364

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK  ++ DA ++F +M+E+    +VVT++ L+DG  K+  +  A D+ ++M  + 
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +P+ V+Y+ L++GL K+G               H+  D +T A+  +G+
Sbjct: 425 CAPDYVAYNTLMNGLRKQG--------------RHIQADRLTQAMKEKGF 460



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  LF ++ +R L PD++T+N ++ G C   +LDEA  L +++TC    P+
Sbjct: 369 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            + +  L++   K+GR   A  +   M EKG
Sbjct: 429 YVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 30/46 (65%)

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P+  T+ ++++ +CK G+  +  +L++ ML NGI PDG+  + L D
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILID 51


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  ALKLFG +  +G EP++ TYN +I G    +R++EA +LF  L    L+P+
Sbjct: 268 LAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T+ ID  CK GR++DA +M   M EKG   +VV+++ +I+G  K + +  A  +  
Sbjct: 328 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA- 180
            M     SPN +S++ LI G C+ G  ++A+  F   L   + P VVTY IL+ G CKA 
Sbjct: 388 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 447

Query: 181 --GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             GR  EA+ L+D+M+  G +PD +  S L D
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALID 479



 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 122/208 (58%), Gaps = 4/208 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD ALK+F     RG  PD++TYN +I G+C  ++LDEA ++ +++    L P+ +
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDVYEE 122
           T+  L++  CK GR+D+A M+   +++KG   NV+TYS LI G  +  + ++SA  + E+
Sbjct: 192 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N   P+IVSY+ LI GL +   + EAL  F   L     P+V TY ILI G  K  R
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +L+  ++++G+ PD +  +   D
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFID 336



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 115/212 (54%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  L   +  +G  P+ I++NT+ICG C   +  +A+  F+++    +KP 
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 432

Query: 62  SITFTILIDAFCK---EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +T+ IL+D  CK   EGR+ +A  +F  M+EKG   +VVTYS LIDG  K+  +  A  
Sbjct: 433 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 492

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +   M      PN+ +Y+ LI GLC    ++EAL  F   ++   +PD +TY  +I   C
Sbjct: 493 LLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALC 552

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K     +A+ L+D  L  G++P   +  +L D
Sbjct: 553 KQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 4/208 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-SLNRLDEAVQLFEKLTCVQLKP 60
           L K   +D A  L   + D+G  P++ITY+T+I G C  L RL+ A QL EK+     KP
Sbjct: 200 LCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +++  LI    +E  + +A  +F  +L +G +  V TY+ LIDG  K   +  AF+++
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             + ++ + P+ ++Y++ IDGLCK G +E+AL       +   +PDVV++  +I G CK 
Sbjct: 317 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 376

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  EA  L   M   G  P+ +  +TL
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTL 404



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ A +   QL  +GL  DI T+N  I G C  +R+ +A  +F+ +      PN
Sbjct: 26  LLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPN 84

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L+   C  GRM DA  ++ +M++ G   +VVTY+ L+ G+ K   +  A  +++
Sbjct: 85  RITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFD 144

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              +    P++V+Y+ LI+G CK   ++EA       +   L+PDVVTY  L+ G CK G
Sbjct: 145 GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNG 204

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  L   ++  G  P+ +  STL
Sbjct: 205 RVDEARML---IVDKGFSPNVITYSTL 228



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSL---NRLDEAVQLFEKLTCVQLKPNSITFTI 67
           A+  F ++  RG++P ++TYN ++ G C      R+ EA+ LF+ +      P+ +T++ 
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID   K G++DDA  +   M  KG   NV TY+ LI G      +  A +++  M E  
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ ++Y  +I  LCK+ ++++AL  F  +L+  ++P    Y  LI G C   R  EA+
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596

Query: 188 QL 189
           +L
Sbjct: 597 KL 598



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 1/186 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD  T   ++       ++++A +  E+L    L   S TF I I   C+  R+ DA  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIS-TFNIYISGLCRASRIGDAQTV 72

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M + G   N +TY+ L+ G      M  A  +YE M +   SP++V+Y+ L+ G CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G ++EAL  F  A+    +PDVVTY  LI G+CKA +  EA ++   M+   ++PD + 
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 205 LSTLAD 210
            ++L +
Sbjct: 193 YNSLVN 198



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +  A+ LF  + ++G  PD++TY+ +I G     +LD+A +L   +      PN  
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   C   ++D+A  +F  M+EKG   + +TY  +I    K + +  A  +++  
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEAL 152
            E  + P    Y  LIDGLC    ++EAL
Sbjct: 568 LEAGVVPTSGMYFSLIDGLCAVARVDEAL 596


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 121/209 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A++L  ++ D G  P++ +YNT++ G+C  NR++ A+ L E++      P+
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T +I+  CK  ++D+A  +  KM+++G + NV+TY  L+DG+ +  ++  A ++  
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    PN ++Y+ ++   C+R  ME A       +     PD + Y+ +I G+CKAG
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L + M+R G  PD   LSTL D
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLID 448



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 116/200 (58%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   LD A  L  ++T  G  P+I+TYNTII G+C L R+DEA  L E++     +PN
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T+T+L+DAFCK G+ +DA  +   M+EKG   N+ TY+ L+D + K   ++ A  +  
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M +    PN+VSY+ +I GLCK   + E +      L N+ +PD+VT+  +I   CK  
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
            R   A +L++ +  +G  P+
Sbjct: 1173 RVDIAYELFNLIQESGCTPN 1192



 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 107/184 (58%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TYN+++ G C   R+++A  LF+++    + P+ +T++I+I +FCK+  +D A  M
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M E     +VVTYS LI+G  K+  +  AFDV++EM     +PN+V+Y+ LIDGLCK
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              +E+A             PD +TY  LI G C A R  EA ++   M   G +PD + 
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687

Query: 205 LSTL 208
             TL
Sbjct: 688 YGTL 691



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 118/209 (56%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   +D A +L   +  +G  P+++TY++++ G C   +LDEA  L +++T     PN
Sbjct: 958  LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T+  +ID  CK GR+D+A  +  +M++ G + NVVTY+ L+D + K    + A  + E
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M E    PN+ +Y+ L+D  CK+  +E A       +    +P+VV+Y  +I G CKA 
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 1137

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  E + L + ML N  +PD +  +T+ D
Sbjct: 1138 KVHEGVLLLEQMLSNNCVPDIVTFNTIID 1166



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 1/211 (0%)

Query: 2    LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K    D A  L  ++T + G  PDIITYNT+I G C   R+D A +LF ++    L P
Sbjct: 1203 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 1262

Query: 61   NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + +T++I+I + CK   MD+A  +   ML+ G     +TY  LIDG+ K+ N+  A ++ 
Sbjct: 1263 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 1322

Query: 121  EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + +      P++V++SI ID L KRG + +A       L   L+PD VTY  L++G+C A
Sbjct: 1323 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 1382

Query: 181  GRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
                +A+ L++ M + G  PD    +TL  +
Sbjct: 1383 SLTEDAVDLFEVMRQCGCEPDNATYTTLVGH 1413



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 112/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++  ++  RG +P++ITY T++ G+C +  LD AV+L  K+T    +PN+IT+ 
Sbjct: 315 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++  FC+   M+ A  +   M++ G   + + YS +I G+ K+  ++ A D+ E+M   
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++   S LID LCK   ++ A      ++     PDVV Y+ILI   CKA R  EA
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
               D M++N   PD +  +++ D
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVD 518



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 117/202 (57%), Gaps = 1/202 (0%)

Query: 8    LDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD+AL+LF ++ + G   PD+ TY+TI+       ++D+A +L E +      PN +T++
Sbjct: 928  LDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYS 987

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+   CK G++D+AT +  +M   G   N+VTY+ +IDG+ K   +  A+ + EEM + 
Sbjct: 988  SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 1047

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               PN+V+Y++L+D  CK G  E+A+      ++   +P++ TY  L+  +CK      A
Sbjct: 1048 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107

Query: 187  MQLYDSMLRNGIMPDGLLLSTL 208
             QL  SM++ G +P+ +  +T+
Sbjct: 1108 CQLLSSMIQKGCVPNVVSYNTV 1129



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 1/210 (0%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKP 60
            L +   +  A +L  ++   G+  ++I +N +I G CS  +LD A++LF+++       P
Sbjct: 887  LCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPP 946

Query: 61   NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +  T++ ++D+  K G++DDA  +   M+ KG   NVVTYS L+ G  K+  +  A  + 
Sbjct: 947  DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006

Query: 121  EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + M  +  SPNIV+Y+ +IDG CK G ++EA +     +D    P+VVTY +L+  +CK 
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066

Query: 181  GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            G+  +A+ L + M+  G +P+    ++L D
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 1/211 (0%)

Query: 1    MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            M  K+  ++ A +L   +  +G  P++++YNT+I G C   ++ E V L E++      P
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156

Query: 61   NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + +TF  +IDA CK  R+D A  +F+ + E G   N+VTY+ L+ G  KS+    A  + 
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216

Query: 121  EEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             EM  +   SP+I++Y+ +IDGLCK   ++ A   F   L + L PD VTY+I+I   CK
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 180  AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 EA  + + ML+NG  P  +   TL D
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLID 1307



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 5/214 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++L  ++T+RG  P+ ITYN I+  +C  N ++ A Q+ + +      P++I ++ 
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FCK G++ +A  +  +M+ +G + +V   S LID   K+  + SA ++       +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P++V+YSILI  LCK   + EA       + N   PDVVTY  ++ G CK+ R  +A 
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 188 QLYDSMLRNGIMPDGLLLSTL-----ADYNLQSS 216
            L+D M   G+MPD +  S +      D NL S+
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSA 564



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D+A +L          PD++ Y+ +I   C   RL EA    + +   +  P+
Sbjct: 450 LCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPD 509

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D  CK  R++DA ++F +M   G   +VVTYS +I  + K  N+ SAF + E
Sbjct: 510 VVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLE 569

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P++V+YS LI+GLCK G +++A   F   L     P++VTY  LI G CK  
Sbjct: 570 RMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKIN 629

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A ++ + M +    PD +  + L
Sbjct: 630 KVEQAAEMLEIMRKQSCTPDSITYTCL 656



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 109/194 (56%), Gaps = 4/194 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF ++   G+ PD++TY+ +I  +C  N LD A ++ E++   +  P+
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+  CK G +D A  +F +ML  G   N+VTY+ LIDG  K   ++ A ++ E
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + + +P+ ++Y+ LI+GLC    +EEA        D   LPD +TY  L+R   K  
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK-- 697

Query: 182 RPTEAMQLYDSMLR 195
             T  ++L + +L+
Sbjct: 698 --TNNLELVEQLLK 709



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 106/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A  L  Q+  RG  PD+   +T+I   C    +D A +L      +   P+ +
Sbjct: 417 KAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVV 476

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ILI A CK  R+ +A      M++     +VVTY+ ++DG  KS+ +  AF +++ M
Sbjct: 477 AYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V+YSI+I   CK   ++ A        +   +PDVVTY+ LI G CKAG  
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A  ++  ML  G  P+ +  +TL D
Sbjct: 597 DKAFDVFQEMLGCGCAPNLVTYNTLID 623



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 1/205 (0%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             +D A  L  ++ D G +P+++TY  ++  +C   + ++A+ L E +      PN  T+ 
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+D FCK+  ++ A  + S M++KG   NVV+Y+ +I G  K+  +     + E+M  N
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            N  P+IV+++ +ID +CK   ++ A   F+   ++   P++VTY  L+ G CK+ R  +A
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212

Query: 187  MQLYDSMLR-NGIMPDGLLLSTLAD 210
              L   M R  G  PD +  +T+ D
Sbjct: 1213 EYLLREMTRKQGCSPDIITYNTVID 1237



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 1/210 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+K      A  LF    +     D +TY+T+I G+    ++  A +LF+++    LK 
Sbjct: 135 VLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKA 194

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++     ++   C  G+  DA + F +M +  P  + VTY+ +I+G  KS  +  A  + 
Sbjct: 195 HAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDRLDDAIRLL 253

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +N  +PN+ SY+ ++ G CK   +E AL+     +     PDVV+Y  +I G CK 
Sbjct: 254 EEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKL 313

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA ++ D M++ G  P+ +   TL D
Sbjct: 314 DQVDEACRVMDKMIQRGCQPNVITYGTLVD 343



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 4/204 (1%)

Query: 9    DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            DAAL  F   T + G   D  T N ++     L R  +A+Q++    C    PN  TFTI
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS--PNMFTFTI 882

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN- 126
            LI   C+ G +  A  +  +M   G   NV+ ++ +I G   ++ + SA ++++EM E+ 
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  P++ +YS ++D L K G +++A       +     P+VVTY+ L+ G CKAG+  EA
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002

Query: 187  MQLYDSMLRNGIMPDGLLLSTLAD 210
              L   M R+G  P+ +  +T+ D
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIID 1026



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 18/221 (8%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   +D A  +   +   G +P  ITY T+I G+C    LD+A+++ + L      P+
Sbjct: 1274 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 1333

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +TF+I ID   K GR+  A  +   ML  G   + VTY+ L+ G+  +   + A D++E
Sbjct: 1334 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFE 1393

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD------NHLLPDVVTYAILIR 175
             M +    P+  +Y+ L+  L  +   ++ L     ++       NH L   +  +I + 
Sbjct: 1394 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVE 1453

Query: 176  G-----------YCKAGRPTEAMQLYDSM-LRNGIMPDGLL 204
                        + K G P +A ++++ M  RN ++   +L
Sbjct: 1454 ADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAML 1494



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 70/122 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F ++   G  P+++TYNT+I G C +N++++A ++ E +      P+
Sbjct: 590 LCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPD 649

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           SIT+T LI+  C   R+++A  +  +M +KG   + +TY  L+    K+ N++    + +
Sbjct: 650 SITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLK 709

Query: 122 EM 123
           EM
Sbjct: 710 EM 711



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 34/175 (19%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---- 123
           L++   K  +   A  +F   +E     + VTYS LI G+ ++  +  A+++++EM    
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191

Query: 124 --------------------CENNI----------SPNIVSYSILIDGLCKRGLMEEALY 153
                               C + +           P+ V+Y+ +I+GL K   +++A+ 
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIR 251

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                +DN   P+V +Y  ++ G+CKA R   A+ L + M+  G  PD +  +T+
Sbjct: 252 LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTV 306



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 22/218 (10%)

Query: 1    MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
             L K   L  A +L   +   GL PD +TYNT++ G+C  +  ++AV LFE +     +P
Sbjct: 1343 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEP 1402

Query: 61   NSITFTILIDAFCKEGRMDDATMMFSK-MLEKGPK----------------ANVVTYSCL 103
            ++ T+T L+     +    D     SK M++ G K                A+V     +
Sbjct: 1403 DNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAI 1462

Query: 104  IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
            +D + K  + + A  V+E M + N+    V +S ++         E+A   +       +
Sbjct: 1463 VDMFGKCGSPQDARKVFEGMDQRNV----VLWSAMLGVYVFHKQEEQAFGLWRVMGLEGV 1518

Query: 164  LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN-GIMP 200
             PD VT+  L+   C AG    A+  + S+ R+ G+ P
Sbjct: 1519 EPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEP 1556



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 10/131 (7%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTI 67
            + A  L+  +   G+EPD +T+ +++   C    LD AV  F  ++    L+P    F+ 
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSC 1563

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            +ID   + G +++A  +   ML    K +  T++CL+  Y    + + A  V E      
Sbjct: 1564 VIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRVAE------ 1614

Query: 128  ISPNIVSYSIL 138
            ++P   SY +L
Sbjct: 1615 LNPTQASYLLL 1625


>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
          Length = 374

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 115/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALK+   +   G+E DI TYNT+ CG C +NRLDEA  L   +  + + PN +T+T 
Sbjct: 159 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTT 218

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK+G M +A  +F +M EKG   +VVTY+ +I GY K  +++ A    +EM +  
Sbjct: 219 LISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKG 278

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++ +Y+ L+ G C  G ++ AL  F         P+VV Y  LI G  K GR   A 
Sbjct: 279 FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAF 338

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           QLYD ML+ G++PD  L S L
Sbjct: 339 QLYDDMLKAGLIPDDSLYSAL 359



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+  +    G+EP+  TY  +I G+C + +++ A  L   +    +  N I F  +ID +
Sbjct: 94  KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 153

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C++G +DDA  + + M + G + ++ TY+ L  G  +   +  A  +   M E  + PN 
Sbjct: 154 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 213

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y+ LI   CK G M EA   F    +    P VVTY ++I GY K G   EA +    
Sbjct: 214 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKE 273

Query: 193 MLRNGIMPD 201
           M + G +PD
Sbjct: 274 MEKKGFVPD 282



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 76/139 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +LF ++ ++G  P ++TYN +I GY     + EA +  +++      P+  
Sbjct: 225 KDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVY 284

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G++D A  +F +M ++G + NVV Y+ LI G  K    ++AF +Y++M
Sbjct: 285 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 344

Query: 124 CENNISPNIVSYSILIDGL 142
            +  + P+   YS L+  L
Sbjct: 345 LKAGLIPDDSLYSALVGSL 363



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 24/205 (11%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE---GRMDD---- 80
           +  + ++ G C   R+D+A +L + +    +  N++ +  L+D + ++   GR+ +    
Sbjct: 15  LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 74

Query: 81  -------ATM----------MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
                  AT+          +  + +  G + N  TY  LI+G+ K   M++A  +  +M
Sbjct: 75  MENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 134

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N + ++ +IDG C++G++++AL          +  D+ TY  L  G C+  R 
Sbjct: 135 QGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRL 194

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L   M+  G++P+ +  +TL
Sbjct: 195 DEAKTLLHIMIEMGVVPNYVTYTTL 219



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 60  PNSIT---FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           P S++    ++++D  CK GR+DDA  +   M   G   N + Y+ L+D Y + ++    
Sbjct: 9   PGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRV 68

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            ++ E M    I   +       DG C  G   + L    C + N + P+  TY +LI G
Sbjct: 69  QEILEIMENEGIEATVG------DGTC--GGPPKVL--DEC-VGNGVEPNERTYGVLING 117

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +CK G+   A  L   M   G+  + ++ +T+ D
Sbjct: 118 FCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 151



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALKLF ++  RG EP+++ Y  +I G     R + A QL++ +    L P+   ++ 
Sbjct: 299 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSA 358

Query: 68  LIDAFCKEGRMD 79
           L+ +   + R D
Sbjct: 359 LVGSLHTDNRKD 370


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 118/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL +F  +  +G+ PDI TY ++I G C  +R  EA  L  ++T + + P+ +TF +
Sbjct: 249 VNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNV 308

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCKEG++ +A  +   M E G + NVVTYS L+ GY    ++  A  ++  M    
Sbjct: 309 LVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKG 368

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PNI SY+ILI+G CK   ++EA+  F+  +   L P+ V+Y  LI G+C+ G+  EA 
Sbjct: 369 CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+ +M  NG +PD    S L D
Sbjct: 429 DLFRNMCTNGNLPDLFTYSILLD 451



 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 122/207 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  AL +   +T+ G+EP+++TY++++ GY     + EA +LF  +     KPN  
Sbjct: 315 KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF 374

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +CK  R+D+A  +F++M+ +G   N V+Y+ LI G+ +   ++ A D++  M
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C N   P++ +YSIL+DG CK+G + +A   F      +L P++V Y IL+   CK+G  
Sbjct: 435 CTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A +L+  +   G+ P   L +T+ +
Sbjct: 495 KDARKLFSELFVQGLQPHVQLYTTIIN 521



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 120/242 (49%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A++LF  +  +G +PD+ TYNTII G C +     A  L +K+     +PN
Sbjct: 173 LCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPN 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID+ C++  +++A  +FS M  KG   ++ TY+ LI G  K    K A  +  
Sbjct: 233 MVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN 292

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYA--------------------------- 154
           EM   NI P+IV++++L+D  CK G + EAL                             
Sbjct: 293 EMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352

Query: 155 --------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                   FH  +     P++ +Y ILI GYCKA R  EAMQL++ M+  G+ P+ +  +
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYN 412

Query: 207 TL 208
           TL
Sbjct: 413 TL 414



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  +G +P+I +YN +I GYC   R+DEA+QLF ++    L PN++++  LI 
Sbjct: 357 ARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIH 416

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+ G++ +A  +F  M   G   ++ TYS L+DG+ K   +  AF ++  M    + P
Sbjct: 417 GFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKP 476

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+IL+  +CK G  ++A   F       L P V  Y  +I G CK G   EA++ +
Sbjct: 477 NLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAF 536

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            +M  +G  PD +       YN+   G  +H
Sbjct: 537 RNMEADGCPPDEI------SYNVIIRGLLQH 561



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A++LF ++  +GL P+ ++YNT+I G+C L +L EA  LF  +      P+  
Sbjct: 385 KAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLF 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D FCK+G +  A  +F  M     K N+V Y+ L+    KS N K A  ++ E+
Sbjct: 445 TYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSEL 504

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++  Y+ +I+GLCK GL++EAL AF     +   PD ++Y ++IRG  +    
Sbjct: 505 FVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDE 564

Query: 184 TEAMQLYDSMLRNGIMPD 201
           + A+ L   M   G + D
Sbjct: 565 SRALLLVGEMRDRGFIAD 582



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 112/202 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D    +  ++   GL+P I+T+ T+I G C +    +AV+LF+ +     +P+  T+ 
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +  KM E G + N+VTYS LID   + + +  A D++  M   
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP+I +Y+ LI GLCK    +EA    +     +++PD+VT+ +L+  +CK G+ +EA
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + +  +M   G+ P+ +  S+L
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSL 344



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 107/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + D  + L  Q+   GL P+I T +  +  +C L R+D    +  K+  + L+P  +TFT
Sbjct: 108 YYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFT 167

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G    A  +F  M+ KG + +V TY+ +I+G  K     +A  + ++M E 
Sbjct: 168 TLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA 227

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+YS LID LC+  L+ EAL  F       + PD+ TY  LI+G CK  R  EA
Sbjct: 228 GCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEA 287

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M    IMPD +  + L D
Sbjct: 288 SALLNEMTSLNIMPDIVTFNVLVD 311


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 121/210 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ AL +F ++  +G+ P++ TYN+II G C  +       L  ++   ++ PN
Sbjct: 224 LFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + FT L+DA CKEG +  A  +   M+++G + +VVTY+ L+DG+     M  A  V++
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +PN++SYS LI+G CK   +++A+Y F       L+P++VTY  LI G C  G
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+ +G +PD +    L DY
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDY 433



 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 117/194 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  +  +G  P++I+Y+T+I GYC + R+D+A+ LFE++   +L PN +T+  
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F +M+  G   ++VTY  L+D   K++++  A  + + +  +N
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P+I SY+I+IDG+C+ G +E A   F       L PDV TY I+I G C  G   EA 
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514

Query: 188 QLYDSMLRNGIMPD 201
           +L+  M  +G  PD
Sbjct: 515 KLFREMNTDGCSPD 528



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 3/208 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL   D    +  ++   G +PD  T+ T+I G C   ++ EA+ LF+K+     +PN 
Sbjct: 120 CHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNG 179

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LI   CK G    A  +   M++K  + NV+TY+ +ID  FK + +  A +++ E
Sbjct: 180 VTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSE 239

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISPN+ +Y+ +I GLCK    +      +  +D+ ++P+VV +  L+   CK G 
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGM 299

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            T A  + D M++ G+ PD +  + L D
Sbjct: 300 VTIAHDVVDVMIQRGVEPDVVTYTALMD 327



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 113/206 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G +P+ +TY T+I G C +     A++L   +     +PN IT
Sbjct: 157 EGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVIT 216

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +ID   K+ ++++A  +FS+M+ KG   NV TY+ +I G  K    K    +  EM 
Sbjct: 217 YNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMV 276

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I PN+V ++ L+D LCK G++  A       +   + PDVVTY  L+ G+C      
Sbjct: 277 DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD 336

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +++D+M+R G  P+ +  STL +
Sbjct: 337 EADKVFDTMVRKGCAPNVISYSTLIN 362



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  R L P+I+TYNT+I G C + RL +A+ LF ++      P+ +T+ I
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK   +D A  M   +       ++ +Y+ +IDG  +   +++A D++  +    
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+I+I+GLC +GL+ EA   F     +   PD  TY ++ RG+ +      A+
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAI 549

Query: 188 QLYDSMLRNGIMPDG----LLLSTLADYNLQSSGSQ 219
           QL   ML  G   D     L++  L+D  L  S  Q
Sbjct: 550 QLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQ 585



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 107/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+  D+ T   +I  +C LNR+D    +  K+  +  +P++ TFT
Sbjct: 89  HYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFT 148

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F KM+ +G + N VTY  LI G  K  N ++A  +   M + 
Sbjct: 149 TLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK 208

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+++Y+ +ID L K   + EAL  F   +   + P+V TY  +I G CK       
Sbjct: 209 NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHV 268

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M+ + IMP+ ++ +TL D
Sbjct: 269 ATLMNEMVDSKIMPNVVIFTTLVD 292



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  F ++      P ++ +  I+    ++      + L +++  + +  +  T  I
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++FC   R+D    + +K+ + G + +  T++ LI G      +  A  ++++M    
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V+Y  LI GLCK G    A+      +  +  P+V+TY  +I    K  +  EA+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 188 QLYDSMLRNGIMPD 201
            ++  M+  GI P+
Sbjct: 235 NIFSEMIAKGISPN 248



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ +   +    L PDI +YN +I G C +  L+ A  LF  L+   L P+
Sbjct: 434 LCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPD 493

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C +G + +AT +F +M   G   +  TY+ +  G+ ++    SA  + +
Sbjct: 494 VWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQ 553

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           EM     S +  + +++++ L   GL +      H
Sbjct: 554 EMLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 82/172 (47%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           + N +DEA+  F ++  +Q  P+ + F  ++ +            +  +M   G  ++V 
Sbjct: 51  NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + +I+ +     +   F V  ++ +    P+  +++ LI GLC  G + EAL+ F   
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +     P+ VTY  LI G CK G    A++L  SM++    P+ +  +T+ D
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIID 222


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 132/222 (59%), Gaps = 5/222 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A +L   +   GL+PD+I+YNT+I G+C  +R+DEAV+L + +    LKPN
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L+  +CK GR+D+A  +F +ML KG    V TY+ +++G F+S     A ++Y 
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYV 739

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCK 179
            M ++    +I +YSI++DG CK    +EA   F   C++D  L  D++T+ I+I G  K
Sbjct: 740 NMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQL--DIITFNIMIDGLFK 797

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            GR  +AM L+ ++  NG++P  +    +A+ NL   GS E 
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAE-NLIEEGSLEE 838



 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F Q+ DRG++PD +TYNTII G C    +D+A  +F+++    +KP+
Sbjct: 305 LCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+TI+ID  CK   +D A  +F +M++KG K N  TY+CLI GY  +   +      +
Sbjct: 365 NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIK 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +++ P++ +Y +L+D LCK G   EA   F   +   + P V  Y I++ GY K G
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKG 484

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +E   L + M+ NGI P+  + +T+
Sbjct: 485 ALSEMHDLLNLMVANGISPNHRIFNTV 511



 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 118/200 (59%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
              E  +D A  LF ++   G+ PD++TYNTII G C    +D A  +F+++    +KPN
Sbjct: 203 FFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPN 259

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +ID  CK   +D A  +F KM++KG K + VTY+ +IDG  K+Q +  A  V++
Sbjct: 260 NVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQ 319

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + P+ V+Y+ +IDGLCK   +++A   F   +D  + PD +TY I+I G CKA 
Sbjct: 320 QMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQ 379

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  ++  M+  G+ P+
Sbjct: 380 SVDRAEGVFQQMIDKGVKPN 399



 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 116/199 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F ++ D+G++P  +TYNTII G C    +D A  +F+++    +KP+
Sbjct: 270 LCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPD 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID  CK   +D A  +F +M++KG K + +TY+ +IDG  K+Q++  A  V++
Sbjct: 330 HVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQ 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN  +Y+ LI G    G  EE +        + L PDV TY +L+   CK G
Sbjct: 390 QMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNG 449

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  EA  L+DSM+R GI P
Sbjct: 450 KCNEARSLFDSMIRKGIKP 468



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 121/210 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F Q+ ++G++P+ +TYNTII G C    +D A  +F+K+    +KP+
Sbjct: 235 LCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPS 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +ID  CK   +D A  +F +M+++G K + VTY+ +IDG  K+Q +  A  V++
Sbjct: 295 NVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQ 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + P+ ++Y+I+IDGLCK   ++ A   F   +D  + P+  TY  LI GY   G
Sbjct: 355 QMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           +  E +Q    M  + + PD      L DY
Sbjct: 415 QWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F Q+ D+G++P+  TYN +I GY S  + +E VQ  ++++   L+P+
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +L+D  CK G+ ++A  +F  M+ KG K +V  Y  ++ GY K   +    D+  
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLN 494

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N ISPN   ++ +I    KR +++E ++ F       L P+VVTY  LI   CK G
Sbjct: 495 LMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLG 554

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A+  ++ M+  G+ P+ ++ ++L
Sbjct: 555 RVDDAVLQFNQMINEGVTPNNVVFNSL 581



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 111/191 (58%), Gaps = 3/191 (1%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           D    PD+++YN +I G+ +  ++D+A  LF ++    + P+ +T+  +ID  CK   +D
Sbjct: 186 DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVD 242

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +F +M+EKG K N VTY+ +IDG  K+Q +  A  V+++M +  + P+ V+Y+ +I
Sbjct: 243 RAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTII 302

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLCK   ++ A   F   +D  + PD VTY  +I G CKA    +A  ++  M+  G+ 
Sbjct: 303 DGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVK 362

Query: 200 PDGLLLSTLAD 210
           PD L  + + D
Sbjct: 363 PDNLTYTIIID 373



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 107/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +   G+ P+   +NT+IC Y     +DE + +F K+    L PN +T+  LIDA C
Sbjct: 492 LLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC 551

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+DDA + F++M+ +G   N V ++ L+ G       +   +++ EM    I P+IV
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV 611

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ ++  LCK G + EA       +   L PDV++Y  LI G+C A R  EA++L D M
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 194 LRNGIMPDGLLLSTL 208
           +  G+ P+ +  +TL
Sbjct: 672 VSAGLKPNIVSYNTL 686



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 113/202 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+KL   +   GL+P+I++YNT++ GYC   R+D A  LF ++    + P   T+ 
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++   + GR  +A  ++  M++     ++ TYS ++DG+ K+     AF +++ +C  
Sbjct: 720 TILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM 779

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++  +I++++I+IDGL K G  E+A+  F     N L+P VVTY ++     + G   E 
Sbjct: 780 DLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEEL 839

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+  M ++G  P+  +L+ L
Sbjct: 840 DCLFSVMEKSGTAPNSHMLNAL 861



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 107/197 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  + +F ++  +GL P+++TY T+I   C L R+D+AV  F ++    + PN++
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  L+   C   + +    +F +ML +G + ++V ++ ++    K   +  A  + + M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+++SY+ LIDG C    M+EA+      +   L P++V+Y  L+ GYCKAGR 
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696

Query: 184 TEAMQLYDSMLRNGIMP 200
             A  L+  MLR G+ P
Sbjct: 697 DNAYCLFREMLRKGVTP 713



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 113/195 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F Q+ + G+ P+ + +N+++ G C++++ ++  +LF ++    ++P+
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  ++   CKEGR+ +A  +   M+  G K +V++Y+ LIDG+  +  M  A  + +
Sbjct: 610 IVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLD 669

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PNIVSY+ L+ G CK G ++ A   F   L   + P V TY  ++ G  ++G
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729

Query: 182 RPTEAMQLYDSMLRN 196
           R +EA +LY +M+++
Sbjct: 730 RFSEARELYVNMIKS 744



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 101/209 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  LF  +  +G++P +  Y  ++ GY     L E   L   +    + PN
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F  +I A+ K   +D+   +F KM ++G   NVVTY  LID   K   +  A   + 
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PN V ++ L+ GLC     E+    F   L+  + PD+V +  ++   CK G
Sbjct: 565 QMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +L DSM+  G+ PD +  +TL D
Sbjct: 625 RVMEARRLIDSMVCMGLKPDVISYNTLID 653



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 15/214 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIIC----GYCSLNRLDEAVQLFEKLT---CVQLKP 60
           L  ALKLF +L        +   N ++       CS +    AV  F ++      ++ P
Sbjct: 24  LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSS-KLAVSRFNRMLRDCSNKVAP 82

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV- 119
           +  T++I+I  FC+ GR++     F  +L+ G + + +  + L+ G   ++ +  A  V 
Sbjct: 83  DCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVL 142

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRG 176
             +M E      +VSY+ L+ GLC R   EEA    H  +D       PDVV+Y I+I G
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   G+  +A  L+  M   G+ PD +  +T+ D
Sbjct: 203 FFNEGQVDKAYSLFLEM---GVSPDVVTYNTIID 233



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 67/125 (53%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           I TY+ I+ G+C  N  DEA ++F+ L  + L+ + ITF I+ID   K GR +DA  +F+
Sbjct: 750 ICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFA 809

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            +   G   +VVTY  + +   +  +++    ++  M ++  +PN    + LI  L  RG
Sbjct: 810 AIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRG 869

Query: 147 LMEEA 151
            +  A
Sbjct: 870 EIPRA 874



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 62/132 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A K+F  L    L+ DIIT+N +I G     R ++A+ LF  +    L P+ +T+ +
Sbjct: 766 FDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRL 825

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   +FS M + G   N    + LI        +  A     ++ E N
Sbjct: 826 IAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKN 885

Query: 128 ISPNIVSYSILI 139
            S    + S+LI
Sbjct: 886 FSLEASTTSMLI 897



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 47/121 (38%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A+ LF  +   GL P ++TY  I         L+E   LF  +      PN
Sbjct: 795 LFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S     LI      G +  A    SK+ EK       T S LI  + + +  + A  + E
Sbjct: 855 SHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPE 914

Query: 122 E 122
           +
Sbjct: 915 K 915


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 131/220 (59%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++   ++ DRG+ P+ +TY+TI+ G+C+L +LDEA QLF+++    + PN
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF+IL+D  C+EG + +A  +F  M EKG + N+ TY+ L++GY     M  A  V+E
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFE 502

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P++ SY+ILI+G C    M++A           L P+ VTY  +++G C  G
Sbjct: 503 IMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVG 562

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           R  +A +L+  M  +G++P      TL  Y++  +G  +H
Sbjct: 563 RLLDAQELFKKMCSSGMLP------TLMTYSILLNGLCKH 596



 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 128/216 (59%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A     ++ D+G+ PD++TY TI+ G C L +L+EA++LF+K+     KP+
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +ID+ CK+  ++DA    S+M+++G   N VTYS ++ G+     +  A  +++
Sbjct: 373 VVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+ PN +++SIL+DGLC+ G++ EA + F    +  + P++ TY  L+ GYC   
Sbjct: 433 EMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRC 492

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  EA ++++ M+  G  PD      L  YN+  +G
Sbjct: 493 KMNEARKVFEIMVGKGCAPD------LHSYNILING 522



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 125/209 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A+    ++  RG+ PD ITYN+I+ G C L +L+EA +LF+++     KP+
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ I+ID+  K+  ++DA    S+M+++G   +VVTY+ ++ G      +  A  +++
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P++V+Y+ +ID LCK  L+ +A+      +D  + P+ VTY+ ++ G+C  G
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA QL+  M+   +MP+ L  S L D
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVD 451



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 119/206 (57%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A++L+ ++   G EPD+I+YNT+I G C+    + AV +F+K+     KPN +T
Sbjct: 176 EGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVT 235

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +ID+ CK+  ++DA    S+M+ +G   + +TY+ ++ G      +  A  +++ M 
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +N   P++V+Y+I+ID L K  L+ +A       +D  + PDVVTY  ++ G C  G+  
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA++L+  M + G  PD +  +T+ D
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIID 381



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 110/202 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D A+ ++G++   G++PD+IT+ T+I G C+  ++  AV+L+ ++     +P+ I++ 
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  C  G  + A  +F KM + G K NVVTY+ +ID   K + +  A D   EM   
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR 262

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+ ++Y+ ++ GLC  G + EA   F     N   PDVVTY I+I    K     +A
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
                 M+  GI PD +  +T+
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTI 344



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 111/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A+ +F ++   G +P+++TYNTII   C    +++A+    ++    + P++IT+  +
Sbjct: 215 NMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSI 274

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C  G++++AT +F +M + G K +VVTY+ +ID  +K + +  A D   EM +  I
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ ++ GLC  G + EA+  F         PDVV Y  +I   CK     +AM+
Sbjct: 335 PPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME 394

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
               M+  GI P+ +  ST+
Sbjct: 395 FLSEMVDRGIPPNAVTYSTI 414



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 110/189 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+   + + N +I   C LN +D AV ++ K+  + ++P+ ITFT LI+  C EG++  A
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA 182

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             ++++M+  G + +V++Y+ LI+G   S N   A  V+++M +N   PN+V+Y+ +ID 
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK  L+ +A+      +   + PD +TY  ++ G C  G+  EA +L+  M +NG  PD
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 202 GLLLSTLAD 210
            +  + + D
Sbjct: 303 VVTYNIIID 311



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 105/186 (56%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
            C ++ A K+F  +  +G  PD+ +YN +I GYC+  R+D+A  L  +++  +L PN++T
Sbjct: 491 RCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVT 550

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++   C  GR+ DA  +F KM   G    ++TYS L++G  K  ++  A  +++ M 
Sbjct: 551 YNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMK 610

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E  + P+I+ Y+ILI+G+   G +E A   F     + + P   TY ++I+G  K G   
Sbjct: 611 EKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSD 670

Query: 185 EAMQLY 190
           EA +L+
Sbjct: 671 EAYELF 676



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  F ++      P I+ +   +     + +    V L  ++    +     +  I
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  C+   +D A  ++ KM + G + +V+T++ LI+G      +K A ++Y EM  + 
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+++SY+ LI+GLC  G    A++ F     N   P+VVTY  +I   CK     +AM
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
                M+  GI PD +  +++ 
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIV 275



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 88/168 (52%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           +D+A+  F ++  +  +P+ + F   + +  K  +      + ++M   G    V + + 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LI+   +  ++  A  V+ +M +  I P++++++ LI+G+C  G ++ A+  ++  + + 
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             PDV++Y  LI G C +G    A+ ++  M +NG  P+ +  +T+ D
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIID 241



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++   G+ P ++TY+ ++ G C    LDEA++LF+ +   +L+P+ I +TILI+
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE--EMCENNI 128
                G+++ A  +FSK+   G +    TY+ +I G  K      A++++   +M ++N+
Sbjct: 627 GMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNV 686



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD ALKLF  + ++ LEPDII Y  +I G     +L+ A  LF KL+   ++P 
Sbjct: 593 LCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPP 652

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
             T+ ++I    KEG  D+A  +F K   K  K NV+
Sbjct: 653 GRTYNVMIKGLLKEGLSDEAYELFRKW--KMMKHNVI 687


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 121/209 (57%), Gaps = 4/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL   G++  +G  PD+ TY  +I   C  NRL EA +  E++    L PN
Sbjct: 21  LCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN 80

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+T+LID  CK GR+D+A  + SKM +K  P A  VTY+ LI G  K++    A+D+ 
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA--VTYNSLISGLCKAERASEAYDLL 138

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM  +   P+I +Y+ LI G CK    ++AL  F   +     PDVVTY+ LI G CK 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 181 GRPTEAMQLYDSMLRNG-IMPDGLLLSTL 208
           GR  EA+ L+  M+++G  MP+ +  ++L
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 3/222 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L KE  L  A+ LFG++   G   P+ +TYN++I G+C + ++DEA+ L E++      P
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T L++ FCK  R+DDA  + ++M  KG   +VVT++ L+DG  +   +  A  + 
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   + SP + +Y+ ++DG C+   +EEA       +D    P+VV++ I+IRG CK 
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKV 372

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            R +EAM+L +   R    PD ++ +T+ D   +     E C
Sbjct: 373 NRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++  + + P  +TYN++I G C   R  EA  L E++      P+
Sbjct: 91  LCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LI  FCK  + DDA  +F +++ +G + +VVTYSCLIDG  K   +K A D++ 
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M ++ +  PN V+Y+ LI G C+ G M+EA+       +    PDVVTY  L+ G+CK 
Sbjct: 210 RMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 269

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  +A  L + M R G+ PD +  ++L D
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 3/203 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ L  ++ + G  PD++TY T++ G+C L RLD+A  L  ++T   L P+ +TFT
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  C+E R+ DA  +  +M  K     V TY+ ++DGY ++  ++ A     E  E 
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EM 353

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN+VS++I+I GLCK     EA+     A      PDVV Y  +I G C+  +  EA
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413

Query: 187 MQLYDSMLRN-GIMPDGLLLSTL 208
            ++Y  ML   G +P+ +  STL
Sbjct: 414 CRVYRKMLEEPGCLPNSITYSTL 436



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 9/199 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKP 60
           L +E  L  A+ + G++  +   P + TYNTI+ GYC  N+L+EA + + E++ C    P
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC---PP 357

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N ++F I+I   CK  R  +A  +  +   +    +VV Y+ +IDG  + + +  A  VY
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417

Query: 121 EEMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +M E     PN ++YS L+ GLC  G+++ A       ++   +P++ TY +LI  + K
Sbjct: 418 RKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRK 473

Query: 180 AGRPTEAMQLYDSMLRNGI 198
           A R  +A +L D M++ G 
Sbjct: 474 ANRDEDARELLDDMVQRGF 492



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 1/146 (0%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T LI   CK  R++ A +   KM+ KG   +V TY+ +I        +  A    EE
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   N++PN+V+Y++LIDGLCK G ++EA+ A    +    +P  VTY  LI G CKA R
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAV-ALLSKMRKKCVPTAVTYNSLISGLCKAER 130

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +EA  L + M+ +G +PD    +TL
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTL 156



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 95  ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           A+ VTY+ LI G  K + ++ A     +M      P++ +Y+ +I  LC    + EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                + +L P+VVTY +LI G CK GR  EA+ L   M R   +P  +  ++L
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSL 121



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%)

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N+ S + V+Y+ LI GLCK   +E+AL      +     PDV TY  +I   C   R  E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A +  + M    + P+ +  + L D
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLID 89


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 121/209 (57%), Gaps = 4/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL   G++  +G  PD+ TY  +I   C  NRL EA +  E++    L PN
Sbjct: 21  LCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN 80

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+T+LID  CK GR+D+A  + SKM +K  P A  VTY+ LI G  K++    A+D+ 
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTA--VTYNSLISGLCKAERASEAYDLL 138

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM  +   P+I +Y+ LI G CK    ++AL  F   +     PDVVTY+ LI G CK 
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198

Query: 181 GRPTEAMQLYDSMLRNG-IMPDGLLLSTL 208
           GR  EA+ L+  M+++G  MP+ +  ++L
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 3/222 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L KE  L  A+ LFG++   G   P+ +TYN++I G+C + ++DEA+ L E++      P
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T L++ FCK  R+DDA  + ++M  KG   +VVT++ L+DG  +   +  A  + 
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   + SP + +Y+ ++DG C+   +EEA       +D    P+VV++ I+IRG CK 
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKV 372

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            R +EAM+L +   R    PD ++ +T+ D   +     E C
Sbjct: 373 NRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++  + + P  +TYN++I G C   R  EA  L E++      P+
Sbjct: 91  LCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LI  FCK  + DDA  +F +++ +G + +VVTYSCLIDG  K   +K A D++ 
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M ++ +  PN V+Y+ LI G C+ G M+EA+       +    PDVVTY  L+ G+CK 
Sbjct: 210 RMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 269

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  +A  L + M R G+ PD +  ++L D
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 3/203 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ L  ++ + G  PD++TY T++ G+C L RLD+A  L  ++T   L P+ +TFT
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  C+E R+ DA  +  +M  K     V TY+ ++DGY ++  ++ A     E  E 
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EM 353

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN+VS++I+I GLCK     EA+     A      PDVV Y  +I G C+  +  EA
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413

Query: 187 MQLYDSMLRN-GIMPDGLLLSTL 208
            ++Y  ML   G +P+ +  STL
Sbjct: 414 CRVYRKMLEEPGCLPNSITYSTL 436



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 9/199 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKP 60
           L +E  L  A+ + G++  +   P + TYNTI+ GYC  N+L+EA + + E++ C    P
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC---PP 357

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N ++F I+I   CK  R  +A  +  +   +    +VV Y+ +IDG  + + +  A  VY
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417

Query: 121 EEMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +M E     PN ++YS LI GLC  G+++ A       ++   +P++ TY +LI  + K
Sbjct: 418 RKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRK 473

Query: 180 AGRPTEAMQLYDSMLRNGI 198
           A R  +A +L D M++ G 
Sbjct: 474 ANRDEDARELLDDMVQRGF 492



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 1/146 (0%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T LI   CK  R++ A +   KM+ KG   +V TY+ +I        +  A    EE
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   N++PN+V+Y++LIDGLCK G ++EA+ A    +    +P  VTY  LI G CKA R
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAV-ALLSKMRKKCVPTAVTYNSLISGLCKAER 130

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +EA  L + M+ +G +PD    +TL
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTL 156



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 95  ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           A+ VTY+ LI G  K + ++ A     +M      P++ +Y+ +I  LC    + EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                + +L P+VVTY +LI G CK GR  EA+ L   M R   +P  +  ++L
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSL 121



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%)

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N+ S + V+Y+ LI GLCK   +E+AL      +     PDV TY  +I   C   R  E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A +  + M    + P+ +  + L D
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLID 89


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 128/209 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L+ ++  RG+ P++ITY+T+I G+C   +L EA  L  ++    + PN
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TIL+DA CKEG++ +A  + + M ++G K NVV+Y+ L+DGY     +++A  ++ 
Sbjct: 220 VYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFH 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++PN+ SY+I+ID LCK   ++EA+      L  +++P+ VTY+ LI G+CK G
Sbjct: 280 TMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLG 339

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R T A+ L   M   G   D +  ++L D
Sbjct: 340 RITSALDLLKEMYHRGQPADVVTYTSLLD 368



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 110/193 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +  +G+ P++ +YN +I   C   R+DEA+ L  ++    + PN++T++ LID
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK GR+  A  +  +M  +G  A+VVTY+ L+D   K+QN+  A  ++ +M E  I P
Sbjct: 334 GFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+ LIDGLCK G  + A   F   L      +V TY ++I G CK G   EA+ + 
Sbjct: 394 NKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMK 453

Query: 191 DSMLRNGIMPDGL 203
             M  NG +PD +
Sbjct: 454 SKMEENGCIPDAV 466



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 108/196 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  L   +T  G++P++++YNT++ GYC +  +  A Q+F  +    + PN
Sbjct: 230 LCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ I+ID  CK  R+D+A  +  ++L K    N VTYS LIDG+ K   + SA D+ +
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLK 349

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       ++V+Y+ L+D LCK   +++A   F    +  + P+  TY  LI G CK G
Sbjct: 350 EMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGG 409

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A +L+  +L  G
Sbjct: 410 RHKNAQKLFQHLLVKG 425



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 113/201 (56%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +ALKL   + DR   P+++ YNTII G C    ++EA  L+ ++    + PN IT++ LI
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G++ +A  + ++M+ K    NV TY+ L+D   K   +K A ++   M +  + 
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+VSY+ L+DG C  G ++ A   FH  +   + P+V +Y I+I   CK+ R  EAM L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              +L   ++P+ +  S+L D
Sbjct: 313 LREVLHKNMVPNTVTYSSLID 333



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A+ LF Q+  +G+EPD+ T N +I  +C L ++  +  +  K+  +  +PN
Sbjct: 20  LVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPN 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   L+   C +G +  +     K++ +G + + V+Y+ L++G  K    +SA  +  
Sbjct: 80  TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKA 180
            + + +  PN+V Y+ +IDGLCK  L+ EA Y  +  +D   + P+V+TY+ LI G+C A
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEA-YDLYSEMDARGIFPNVITYSTLIYGFCLA 198

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  EA  L + M+   I P+    + L D
Sbjct: 199 GQLMEAFGLLNEMILKNINPNVYTYTILMD 228



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 108/194 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  +L    ++  +G + D ++Y T++ G C +     A++L   +     +PN + +  
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+  +++A  ++S+M  +G   NV+TYS LI G+  +  +  AF +  EM   N
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+PN+ +Y+IL+D LCK G ++EA           + P+VV+Y  L+ GYC  G    A 
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275

Query: 188 QLYDSMLRNGIMPD 201
           Q++ +M++ G+ P+
Sbjct: 276 QMFHTMVQKGVNPN 289



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 110/193 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++  + + P+ +TY+++I G+C L R+  A+ L +++       +
Sbjct: 300 LCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPAD 359

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+DA CK   +D AT +F KM E+G + N  TY+ LIDG  K    K+A  +++
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQ 419

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +       N+ +Y+++I GLCK G+++EAL       +N  +PD VT+ I+IR   +  
Sbjct: 420 HLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKD 479

Query: 182 RPTEAMQLYDSML 194
           +  +A +L   M+
Sbjct: 480 QNDKAEKLLHEMI 492



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  + G++   G +P+ IT NT++ G C    + +++   +K+     + + 
Sbjct: 56  CHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQ 115

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  L++  CK G    A  +   + ++  + NVV Y+ +IDG  K + +  A+D+Y E
Sbjct: 116 VSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE 175

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+++YS LI G C  G + EA    +  +  ++ P+V TY IL+   CK G+
Sbjct: 176 MDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGK 235

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L   M + G+ P+ +  +TL D
Sbjct: 236 VKEAKNLLAVMTKEGVKPNVVSYNTLMD 263



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 90/184 (48%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I+ +N I+     +     A+ LF+++    ++P+  T  ILI+ FC  G+M  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             K+L+ G + N +T + L+ G      +K +   ++++       + VSY+ L++GLCK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G    AL       D    P+VV Y  +I G CK     EA  LY  M   GI P+ + 
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 205 LSTL 208
            STL
Sbjct: 188 YSTL 191



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 75/155 (48%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           V+  P  + F  ++ +  K      A  +F +M  KG + ++ T + LI+ +     M  
Sbjct: 4   VRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTF 63

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           +F V  ++ +    PN ++ + L+ GLC +G ++++L+     +      D V+YA L+ 
Sbjct: 64  SFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLN 123

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G CK G    A++L   +      P+ ++ +T+ D
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIID 158


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 121/207 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A++ F Q+  RGL P+ +TY ++I G+     +DEA ++++++      P  +
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++  C  GRM++A  +   M  KG   +VV+YS +I G+ + Q +  AF +  EM
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +SP+ ++YS LI GLC++  + EA   F   L+  LLPD  TY  LI GYCK G  
Sbjct: 475 VEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL 534

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA+ L+D M++ G +PD +  + L +
Sbjct: 535 NEALNLHDEMIKKGFLPDTVTYNVLIN 561



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 124/217 (57%), Gaps = 9/217 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+  L+ F ++      P+++TYNT+I  YC L R+DEA +L   +    L+PN +T+ 
Sbjct: 218 NLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYN 277

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+  C+ GR+++ + + ++M  KG   + VTY+ L++GY K  N   A  ++ EM  N
Sbjct: 278 MVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ LI+ +CK G +  A+  F       L P+ VTY  LI G+ + G   EA
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA 397

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            +++D M+R+G  P      T+  YN   +G   HC+
Sbjct: 398 YRIWDEMIRSGFPP------TIVTYNALLNG---HCV 425



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 110/195 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +  ++  +G  PD +TYNT++ GYC +    +A+ L  ++    L P+ +T+T LI+  C
Sbjct: 295 VLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMC 354

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G ++ A   F +M  +G + N VTY+ LI+G+ +   M  A+ +++EM  +   P IV
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ L++G C  G MEEA+          L PDVV+Y+ +I G+C+      A Q+   M
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474

Query: 194 LRNGIMPDGLLLSTL 208
           +  G+ PD +  S+L
Sbjct: 475 VEKGVSPDAITYSSL 489



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 114/202 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KL   +   GLEP+++TYN +I G C + R++E   +  ++      P+ +T+ 
Sbjct: 253 RIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN 312

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++ +CK G    A ++ S+ML  G   +VVTY+ LI+   K+ N+  A + +++M   
Sbjct: 313 TLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN V+Y+ LI+G  ++G M+EA   +   + +   P +VTY  L+ G+C +GR  EA
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEA 432

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L   M   G+ PD +  ST+
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTI 454



 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 114/204 (55%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +++ ++   G  P I+TYN ++ G+C   R++EA+ L   +    L P+ ++++ 
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC+   +D A  M ++M+EKG   + +TYS LI G  + + +  A D+++EM   +
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y+ LI+G CK G + EAL      +    LPD VTY +LI G  K  R  EA 
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 188 QL-----YDSMLRNGIMPDGLLLS 206
           +L     YD  + NGI  D L+ S
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIES 597



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 113/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K++ ++   G+  ++ +YN +I G+C+   L+  ++ FE++   +  PN +T+  +I 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK  R+D+A  +   M  +G + N++TY+ +I+G  +   ++    V  EM     +P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L++G CK G   +AL      L N L PDVVTY  LI   CKAG    AM+ +
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G+ P+G+  ++L +
Sbjct: 367 DQMHVRGLRPNGVTYTSLIN 386



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 21/220 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L+ A  LF ++ ++ L PD  TY ++I GYC    L+EA+ L +++      P+
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ +LI+   K+ R  +A  +  K+       N +TY  LI                 
Sbjct: 553 TVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI----------------- 595

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E C +    ++V+   LI G C +GLM EA   F   +  +  P+   Y ++I G+C+ G
Sbjct: 596 ESCSDIEFKSVVA---LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDG 652

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
              +A +LY  M+  G +P  + +  L    L S G  E 
Sbjct: 653 NVHKAHKLYKEMVDFGFIPHTVTIIALVKA-LYSEGMDEQ 691



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 62/171 (36%), Gaps = 59/171 (34%)

Query: 100 YSCLIDGYFKSQNMKSAFD----------------------------------------- 118
           + CL D YF   +  + FD                                         
Sbjct: 118 FQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSI 177

Query: 119 ------------VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
                       VY EM  + +S N+ SY+ILI G C  G +E  L  F     N  LP+
Sbjct: 178 VRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPN 237

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           VVTY  +I  YCK  R  EA +L  SM   G+ P+      L  YN+  +G
Sbjct: 238 VVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPN------LLTYNMVING 282



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 59/124 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A ++F  +  R  +P+   YN II G+C    + +A +L++++      P+++T   
Sbjct: 619 MNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A   EG  +   ++   +L     ++      L+    K  N+ + F++  EM ++ 
Sbjct: 679 LVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDG 738

Query: 128 ISPN 131
             P+
Sbjct: 739 FLPS 742


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 128/212 (60%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +D A+K+F  +  +G  PD+I+Y T+I GYC ++++D+A+ LFE++   +  P++ T
Sbjct: 323 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 382

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  L+   C  GR+ DA  +F +M+ +G   ++VTYS L+D   K+++++ A  + + + 
Sbjct: 383 YNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIE 442

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            +N++P+I  Y+I+IDG+C+ G +E A   F       L P V TY I+I G CK G   
Sbjct: 443 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 502

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           EA +L+  M  N   PDG   +T+A   LQ++
Sbjct: 503 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 534



 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF Q+  +G+ PDI TY +++   C+L        L  ++   ++ P+
Sbjct: 215 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 274

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+++G + +VVTY+ L+DG+     M  A  V++
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P+++SY+ LI+G CK   +++A+Y F        +PD  TY  L+ G C  G
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVG 394

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A+ L+  M+  G MPD +  S L D
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLD 423



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 36/245 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ P++ T N +I  +C LNR+  A  +  K+  +  +P+  TFT
Sbjct: 80  HYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFT 139

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F KM+++G + NVVTY  LI+G  K  N  +A  +   M + 
Sbjct: 140 TLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG 199

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH---------------------CAL------ 159
           N  P++V Y+ +ID LCK   + EA   F                      C L      
Sbjct: 200 NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHV 259

Query: 160 --------DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD- 210
                   ++ +LPDVV ++ ++   CK G+ TEA ++ D M++ G+ PD +  +TL D 
Sbjct: 260 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 319

Query: 211 YNLQS 215
           + LQS
Sbjct: 320 HCLQS 324



 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  AL LF ++ D G +P+++TY T+I G C +     A++L   +     +P+
Sbjct: 145 LCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 204

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T +ID+ CK+ ++ +A  +FS+M+ +G   ++ TY+ L+         K    +  
Sbjct: 205 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 264

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + I P++V +S ++D LCK G + EA       +   + PDVVTY  L+ G+C   
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 324

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA++++D M+R G  PD +  +TL
Sbjct: 325 EMDEAVKVFDMMVRKGFAPDVISYTTL 351



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 109/196 (55%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C       L  Q+ +  + PD++ ++T++   C   ++ EA ++ + +    ++P+ +T+
Sbjct: 254 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 313

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T L+D  C +  MD+A  +F  M+ KG   +V++Y+ LI+GY K   +  A  ++EEMC 
Sbjct: 314 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 373

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P+  +Y+ L+ GLC  G +++A+  FH  +    +PD+VTY+IL+   CK     E
Sbjct: 374 KEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEE 433

Query: 186 AMQLYDSMLRNGIMPD 201
           AM L  ++  + + PD
Sbjct: 434 AMALLKAIEASNLNPD 449



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 96/201 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F +L      P I+ +  ++     +      + L  ++    + PN  T  I
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + +  T++ LI G      +  A  ++++M +  
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + TEA 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  GI PD    ++L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSL 246



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 85/171 (49%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            N LD+A+  F +L  +   P+ + F  L+ +  K         + ++M   G   NV T
Sbjct: 43  FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 102

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
            + LI+ +     +  AF V  ++ +    P+  +++ LI GLC  G + EAL+ F   +
Sbjct: 103 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D    P+VVTY  LI G CK G  + A++L  SM +    PD ++ +++ D
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 61/130 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ L   +    L PDI  YN II G C    L+ A  LF  L+   L P+
Sbjct: 425 LCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPS 484

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   CK G +++A  +F +M       +  TY+ +  G+ ++     A  + E
Sbjct: 485 VWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLE 544

Query: 122 EMCENNISPN 131
           EM     S +
Sbjct: 545 EMLARGFSAD 554


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D ALK+   +   G+E D+ TYNT+ CG C +NR+ EA  L   +    + PN +
Sbjct: 319 RQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYV 378

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   CKEG M +A  +F +M  KG   +VVTY+ ++DGY K  +++ A    +EM
Sbjct: 379 TYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEM 438

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++ +Y+ L+ G C  G ++ AL  F         P+VV Y  LI G  K GR 
Sbjct: 439 EKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRS 498

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA QLYD ML+ G+ PD  L S L
Sbjct: 499 EEAFQLYDDMLKAGLTPDDSLYSAL 523



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 98/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F +    G+EP+  TY  +I G+C + +++ A  L   +    +  N I F  +ID
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C++G +D+A  + + M + G + +V TY+ L  G  +   M  A  +   M E  + P
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y+ LI   CK G M EA   F        +P VVTY +++ GY K G   EA +  
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435

Query: 191 DSMLRNGIMPD 201
             M + G++PD
Sbjct: 436 KEMEKKGLVPD 446



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 104/204 (50%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  + +  D+  Y  +I  YC    +  A ++F++     ++PN  T+ +LI+ FCK G
Sbjct: 227 EMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIG 286

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           +M+ A M+ + M  +G   N + ++ +IDGY +   + +A  V   M +  I  ++ +Y+
Sbjct: 287 QMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYN 346

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L  GLC+   M EA    H  ++  + P+ VTY  LI  +CK G   EA +L+  M   
Sbjct: 347 TLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGK 406

Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
           G MP  +  + + D  ++    +E
Sbjct: 407 GAMPSVVTYNVMMDGYIKKGSIRE 430



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 75/139 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A +LF ++  +G  P ++TYN ++ GY     + EA +  +++    L P+  
Sbjct: 389 KEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVY 448

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G++D A  +F +M  +G + NVV Y+ LI G  K    + AF +Y++M
Sbjct: 449 TYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDM 508

Query: 124 CENNISPNIVSYSILIDGL 142
            +  ++P+   YS L+  L
Sbjct: 509 LKAGLTPDDSLYSALVGSL 527



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 4/185 (2%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM--MF 85
           +  + ++ G+C   R+D+A  L +++    ++ N++ +  L+D + +  R DDA +  + 
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVR--RKDDARVQELL 190

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M   G +A V TY+ L+D    + ++     V +EM   N++ ++  Y+ +I+  C+ 
Sbjct: 191 EIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRA 250

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +  A   F   + N + P+  TY +LI G+CK G+   A  L   M   G+  + ++ 
Sbjct: 251 GNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIF 310

Query: 206 STLAD 210
           +T+ D
Sbjct: 311 NTMID 315



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 93/187 (49%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+E  + TY  ++    +   + +   + +++    +  +   +T +I+A+C+ G +  A
Sbjct: 197 GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRA 256

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           + +F + +  G + N  TY  LI+G+ K   M++A  +  +M    +  N + ++ +IDG
Sbjct: 257 SEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDG 316

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C++G+++ AL          +  DV TY  L  G C+  R  EA  L   M+  G+ P+
Sbjct: 317 YCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPN 376

Query: 202 GLLLSTL 208
            +  +TL
Sbjct: 377 YVTYTTL 383



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 1/112 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK+  +  A +   ++  +GL PD+ TY +++ G+C   ++D A++LFE++     +PN 
Sbjct: 423 IKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNV 482

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           + +T LI    KEGR ++A  ++  ML+ G   +   YS L+ G   + N K
Sbjct: 483 VAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV-GSLHTDNRK 533



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALKLF ++  RG EP+++ Y  +I G     R +EA QL++ +    L P+   ++ 
Sbjct: 463 VDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSA 522

Query: 68  LIDAFCKEGRMD 79
           L+ +   + R D
Sbjct: 523 LVGSLHTDNRKD 534


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ AL +F  +  +G+ P+I TYN++I G C+ +R  EA  +  ++  + + PN
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LI+ FCKEG + +A  +   M E G + NVVTYS L++GY     +  A  +++
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFD 391

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ SY+ILI+G CK   + EA   F+  +   L PD+V+Y  LI G C+ G
Sbjct: 392 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 451

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L+ +ML NG +PD    S L D
Sbjct: 452 RLREAHDLFKNMLTNGNLPDLCTYSILLD 480



 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 115/198 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A +LF ++  +GL PDI++YNT+I G C L RL EA  LF+ +      P+  
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 473

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D FCK+G +  A  +F  M     K N+V Y+ LID   KS+N+K A  ++ E+
Sbjct: 474 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 533

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+  Y+ +I+GLCK GL++EAL AF    ++   P+  +Y ++IRG+ +    
Sbjct: 534 FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDE 593

Query: 184 TEAMQLYDSMLRNGIMPD 201
           + A+QL   M   G + D
Sbjct: 594 SRAVQLIGEMREKGFVAD 611



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 113/201 (56%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA  LF ++ + G +PD++TY+TII   C   R++EA+ +F  +    + PN  T+  LI
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C   R  +A+ M ++M+      N+VT+S LI+ + K  N+  A  V + M E  + 
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+YS L++G   +  + EA   F   +     PDV +Y ILI GYCKA R  EA QL
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           ++ M+  G+ PD +  +TL D
Sbjct: 425 FNEMIHQGLTPDIVSYNTLID 445



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  +G +PD+ +YN +I GYC   R+ EA QLF ++    L P+ +++  LID
Sbjct: 386 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 445

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ GR+ +A  +F  ML  G   ++ TYS L+DG+ K   +  AF ++  M    + P
Sbjct: 446 GLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKP 505

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ILID +CK   ++EA   F       L P+V  Y  +I G CK G   EA++ +
Sbjct: 506 NMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAF 565

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            +M  +G  P+         YN+   G  +H
Sbjct: 566 RNMEEDGCPPNEF------SYNVIIRGFLQH 590



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 123/207 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  A  +   +T+ G+EP+++TY++++ GY     + EA +LF+ +     KP+  
Sbjct: 344 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVF 403

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +CK  R+ +A  +F++M+ +G   ++V+Y+ LIDG  +   ++ A D+++ M
Sbjct: 404 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N   P++ +YSIL+DG CK+G + +A   F      +L P++V Y ILI   CK+   
Sbjct: 464 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L+  +   G+ P+  + +T+ +
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIIN 550



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 1/210 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D    +  ++   GL+  I+T+NT+I G C + +  +AV+LF+ +     +P+  T+T
Sbjct: 172 RVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYT 231

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +F KM E G + +VVTYS +ID   K + +  A D++  M   
Sbjct: 232 TIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK 291

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPNI +Y+ LI GLC      EA    +  +  +++P++VT+++LI  +CK G   EA
Sbjct: 292 GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 351

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 215
             +  +M   G+ P+ +  S+L + Y+LQ+
Sbjct: 352 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 104/202 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA + L  Q+   GL PD  T + +I  +  L R+D    +  K+  + L+   +TF  L
Sbjct: 139 DAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTL 198

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  CK G+   A  +F  M+ +G + +V TY+ +I+G  K     +A  ++ +M E   
Sbjct: 199 INGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGC 258

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+YS +ID LCK   + EAL  F       + P++ TY  LI+G C   R  EA  
Sbjct: 259 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 318

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           + + M+   IMP+ +  S L +
Sbjct: 319 MLNEMMSLNIMPNIVTFSLLIN 340



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 1/173 (0%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANV 97
           S   +D+A+  F  +   + +P  I F  L+ A  K     DA +  SK +E  G   + 
Sbjct: 98  SFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDT 157

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            T   LI+ +F+ Q +   F V  ++ +  +   IV+++ LI+GLCK G   +A+  F  
Sbjct: 158 YTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDD 217

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +     PDV TY  +I G CK G    A  L+  M   G  PD +  ST+ D
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L  A +LF  +    L+P+++ YN +I   C    L EA +LF +L    L+PN  
Sbjct: 484 KQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQ 543

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +I+  CKEG +D+A   F  M E G   N  +Y+ +I G+ + ++   A  +  EM
Sbjct: 544 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 603

Query: 124 CENNISPNIVS 134
            E     ++ +
Sbjct: 604 REKGFVADVAT 614


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A KL+  +  R ++PDI TYN+++ G+C  +RLD+A Q+FE +      P+
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R++D T +F +M  +G   + VTY+ LI G F   +  +A  V++
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 421

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLC  G +E+AL  F     + +  D+  Y  +I G CKAG
Sbjct: 422 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 481

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ +  +T+
Sbjct: 482 KVDDGWDLFCSLSLKGVKPNVVTYNTM 508



 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL L  ++    +E D++ +NTII   C    +D+A+ LF+++    ++PN
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+EK    N+VT++ LID + K      A  +Y+
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +I P+I +Y+ L++G C    +++A   F   +     PDVVTY  LI+G+CK+ 
Sbjct: 317 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +  +L+  M   G++ D +  +TL
Sbjct: 377 RVEDGTELFREMSHRGLVGDTVTYTTL 403



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   CS  R  +A QL   +   ++ PN
Sbjct: 232 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG+  +A  ++  M+++    ++ TY+ L++G+     +  A  ++E
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++V+Y+ LI G CK   +E+    F       L+ D VTY  LI+G    G
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ PD +  S L D
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 440



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G  PD IT+ T+I G    N+  EAV L +++     +PN 
Sbjct: 128 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 187

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G  D A  + +KM     +A+VV ++ +ID   K +++  A ++++E
Sbjct: 188 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 247

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + P++VT+  LI  + K G+
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +LYD M++  I PD    ++L +
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSLVN 335



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 118/209 (56%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   PD++TYNT+I G+C   R+++  +LF +++   L  +++T+T
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 401

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI     +G  D+A  +F +M+  G   +++TYS L+DG   +  ++ A +V++ M ++
Sbjct: 402 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 461

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            I  +I  Y+ +I+G+CK G +++  +   C+L    + P+VVTY  +I G C      E
Sbjct: 462 EIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L   M  +G +P+    +TL   +L+
Sbjct: 521 AYALLKKMKEDGPLPNSGTYNTLIRAHLR 549



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  AL L G++   G EP I+T ++++ GYC   R+ +AV L +++  +  +P++I
Sbjct: 94  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 153

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI       +  +A  +  +M+++G + N+VTY  +++G  K  +   A ++  +M
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I  ++V ++ +ID LCK   +++AL  F       + P+VVTY+ LI   C  GR 
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A QL   M+   I P+ +  + L D
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALID 300



 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 105/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + +  LD A+ LFG +      P I+ +N ++     + + D  + L EK+  +++    
Sbjct: 23  LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 82

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ ILI+ FC+  ++  A  +  KM++ G + ++VT S L++GY   + +  A  + ++
Sbjct: 83  YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 142

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+ ++++ LI GL       EA+      +     P++VTY +++ G CK G 
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L + M    I  D ++ +T+ D
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIID 230



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D    LF  L+ +G++P+++TYNT+I G CS   L EA  L +K+      PNS 
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538

Query: 64  TFTILIDAFCKEG 76
           T+  LI A  ++G
Sbjct: 539 TYNTLIRAHLRDG 551


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 119/194 (61%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+LF Q+ + G  PD+ TY  ++  +C + +  EA++ FE++    ++PN  T+T+
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK G+MD+   M S MLEKG  ++VV ++ LIDGY K   M+ A  V + M  N 
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  +Y+ LI G C++  M+ A+   +   +N L P++VTY  LI G CKA     A 
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455

Query: 188 QLYDSMLRNGIMPD 201
           +L+  M+++G +PD
Sbjct: 456 RLHHLMIKDGFVPD 469



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 114/205 (55%), Gaps = 8/205 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A K+F  +   G   + ++Y  +I G+C + ++DEA++LF ++      P+  T+T+
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ AFC+ G+  +A   F +M+E G + NV TY+ LID + K   M    ++   M E  
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCKAGRP 183
           +  ++V ++ LIDG CKRG+ME+A+    C LD    N + P+  TY  LI G+C+    
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAI----CVLDSMKLNKVCPNSRTYNELICGFCRKKSM 416

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             AM L + M  N + P+ +  +TL
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTL 441



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 104/193 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A   F  L   G   D  TY ++I GYC ++ L +A ++FE +       N +++T LI
Sbjct: 208 VAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLI 267

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC+ G++D+A  +F +M E G   +V TY+ L+  + +      A   +EEM EN I 
Sbjct: 268 HGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIE 327

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+ +Y++LID  CK G M+E +      L+  L+  VV +  LI GYCK G   +A+ +
Sbjct: 328 PNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICV 387

Query: 190 YDSMLRNGIMPDG 202
            DSM  N + P+ 
Sbjct: 388 LDSMKLNKVCPNS 400



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           LT       + +YN +         +DE   LF+ +    ++PN I+F  +++A CK G 
Sbjct: 146 LTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGN 205

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +  A   F  +++ G   +  TY+ LI GY K   +  A+ V+E M +     N VSY+ 
Sbjct: 206 VVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTN 265

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI G C+ G ++EAL  F    ++   PDV TY +L+  +C+ G+ TEA++ ++ M+ NG
Sbjct: 266 LIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENG 325

Query: 198 IMPDGLLLSTLADY 211
           I P+    + L DY
Sbjct: 326 IEPNVYTYTVLIDY 339



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  ++ +  L P+++TYNT+I G C    +D A +L   +      P+  TF  
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ID  CK G+++ A  +F  + EK  +AN   Y+ LIDGY K++    A  +++ M    
Sbjct: 476 FIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG 535

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL---------------YAFHCALDNHLL-------- 164
             PN +++++L+DGL K G +E+A+               + +   ++  L         
Sbjct: 536 CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRAN 595

Query: 165 ------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                       P+VVTY   I+ YC+ GR  EA ++   +   GI+ D  +   L +
Sbjct: 596 MFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 109/197 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  + + G+EP++I++NT++  +C +  +  A   F  L       +S T+T LI  +C
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC 236

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   + DA  +F  M ++G   N V+Y+ LI G+ +   +  A +++ +M E+   P++ 
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVP 296

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y++L+   C+ G   EAL  F   ++N + P+V TY +LI  +CK G+  E M++  +M
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356

Query: 194 LRNGIMPDGLLLSTLAD 210
           L  G++   +  + L D
Sbjct: 357 LEKGLVSSVVPFNALID 373



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 61/270 (22%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------- 54
           +++E   D A     Q+   G +P+++TY   I  YC   RL EA ++  K+        
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 55  ------------CV-QL---------------KPNSITFTILI-----DAFCKEG----- 76
                       C+ QL               +P+  T++IL+     + + KEG     
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDL 704

Query: 77  -----RMDDA-----------TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
                 +D+A           TM+F KM+E+G   NV TYS LI G  K +++  AF ++
Sbjct: 705 NSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLF 764

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M E+ ISP+   ++ L+   CK G+ EEAL      ++ + L  + +Y +L+ G  + 
Sbjct: 765 NHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQ 824

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A +++ S+L  G   D ++   L D
Sbjct: 825 GNQEKAEEIFRSLLSCGYNYDEVVWKVLLD 854



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 26/225 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A+ L   +     +P + TY  +I      +  D A    +++     +PN
Sbjct: 550 LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T  I A+C++GR+ +A  M  K+ E+G   +   Y  L++ Y     + SAF V  
Sbjct: 610 VVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLI 669

Query: 122 EMCENNISPNIVSYSILIDGLC-----KRGL---------------------MEEALYAF 155
            M +    P+  +YSIL+  L      K G+                      E     F
Sbjct: 670 RMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLF 729

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
              ++   +P+V TY+ LI+G CK    + A +L++ M  +GI P
Sbjct: 730 EKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISP 774



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 73/137 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ ++G  P++ TY+ +I G C +  L  A +LF  +    + P+      L+ + C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G  ++A  +   M+E    A++ +Y  L+ G F+  N + A +++  +     + + V
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 134 SYSILIDGLCKRGLMEE 150
            + +L+DGL ++G ++E
Sbjct: 848 VWKVLLDGLVRKGYVDE 864



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%)

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           LFEK+      PN  T++ LI   CK   +  A  +F+ M E G   +   ++ L+    
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K    + A  + + M E N   ++ SY +L+ GL ++G  E+A   F   L      D V
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
            + +L+ G  + G   E  QL D M + G
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 49/100 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A +LF  + + G+ P    +N+++   C L   +EA++L + +       +  ++ 
Sbjct: 756 HLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYK 815

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
           +L+    ++G  + A  +F  +L  G   + V +  L+DG
Sbjct: 816 LLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDG 855


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A KL+  +  R ++PDI TYN+++ G+C  +RLD+A Q+FE +      P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R++D T +F +M  +G   + VTY+ LI G F   +  +A  V++
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLC  G +E+AL  F     + +  D+  Y  +I G CKAG
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ +  +T+
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTM 546



 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL L  ++    +E D++ +NTII   C    +D+A+ LF+++    ++PN
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+EK    N+VT++ LID + K      A  +Y+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +I P+I +Y+ L++G C    +++A   F   +     PDVVTY  LI+G+CK+ 
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +  +L+  M   G++ D +  +TL
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTL 441



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   CS  R  +A QL   +   ++ PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG+  +A  ++  M+++    ++ TY+ L++G+     +  A  ++E
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++V+Y+ LI G CK   +E+    F       L+ D VTY  LI+G    G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ PD +  S L D
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 478



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G  PD IT+ T+I G    N+  EAV L +++     +PN 
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G  D A  + +KM     +A+VV ++ +ID   K +++  A ++++E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + P++VT+  LI  + K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +LYD M++  I PD    ++L +
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVN 373



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 118/209 (56%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   PD++TYNT+I G+C   R+++  +LF +++   L  +++T+T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI     +G  D+A  +F +M+  G   +++TYS L+DG   +  ++ A +V++ M ++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            I  +I  Y+ +I+G+CK G +++  +   C+L    + P+VVTY  +I G C      E
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L   M  +G +P+    +TL   +L+
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLR 587



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  AL L G++   G EP I+T ++++ GYC   R+ +AV L +++  +  +P++I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI       +  +A  +  +M+++G + N+VTY  +++G  K  +   A ++  +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I  ++V ++ +ID LCK   +++AL  F       + P+VVTY+ LI   C  GR 
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A QL   M+   I P+ +  + L D
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALID 338



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 105/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + +  LD A+ LFG +      P I+ +N ++     + + D  + L EK+  +++    
Sbjct: 61  LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ ILI+ FC+  ++  A  +  KM++ G + ++VT S L++GY   + +  A  + ++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+ ++++ LI GL       EA+      +     P++VTY +++ G CK G 
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L + M    I  D ++ +T+ D
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIID 268



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D    LF  L+ +G++P+++TYNT+I G CS   L EA  L +K+      PNS 
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576

Query: 64  TFTILIDAFCKEG 76
           T+  LI A  ++G
Sbjct: 577 TYNTLIRAHLRDG 589


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 125/226 (55%), Gaps = 5/226 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD A  +  +    G EPD +TYN  I G C   R+D+A QL +K+   +  P 
Sbjct: 17  LCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPT 76

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T L+D   K GR+D+A  +  +M+EKG    + TY+ +IDG  K+  ++ A  ++ 
Sbjct: 77  TVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFV 136

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE--ALYAFHCALDNH--LLPDVVTYAILIRGY 177
           +M  N   P+   Y+ LI GLCK G  EE  ALY    A  +H   +PDVVTY  LI G 
Sbjct: 137 DMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGL 196

Query: 178 CKAGRPTEAMQLY-DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           CKAGR  EA Q++ D  +  G +PD +  +++ D   +    +E C
Sbjct: 197 CKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 93/166 (56%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++ +  +I G C   RLDEA  + E+      +P+ +T+ + ID  CK  R+DDA  +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             KM EK      VTY+ L+DG  K+  +  A  V E+M E   SP + +Y+++IDGL K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            G +EEA   F   L N   PD   Y  LI+G CK+G+P EA  LY
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALY 170



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 120/217 (55%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++   + F ++ +RG EPD +TY  +I G+     + +A +++ ++       +
Sbjct: 232 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ I++D  CK GR+ +A   F  M E+G  A VVTYS L+DG+    N+ +A +++ 
Sbjct: 292 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC-KA 180
            M +    PN+VSY+I+I GLC+ G + +A + F   L   L PDV T+   + G C + 
Sbjct: 352 RMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRL 411

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              ++ ++L++SM+  G  P+    S L D   ++ G
Sbjct: 412 DTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 448



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 104/185 (56%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +  +RG  PD +TY +II G C L R++E  + F ++     +P+++T+  LID F K  
Sbjct: 212 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 271

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +  A  ++ +ML+ G   + VTY+ ++DG  K+  +  A+  +  M E      +V+YS
Sbjct: 272 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L+DG C  G +  A+  F   LD    P++V+Y I+IRG C+AG+  +A   ++ +L+ 
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391

Query: 197 GIMPD 201
            + PD
Sbjct: 392 RLCPD 396



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A   F  + +RG    ++TY+ ++ G+CS   +  AV+LF ++     +PN
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS-AFDVY 120
            +++ I+I   C+ G++  A   F K+L++    +V T++  + G  +  +  S   +++
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M     SPN+ SYSIL+DG+C+ G +E AL  F   +   + PDVV +  LIR  C A
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  EA++++  + R    PD     +L D
Sbjct: 482 GRVDEALEVFRELERRS-APDAWSYWSLLD 510



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 114/249 (45%), Gaps = 40/249 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   LD A+ +  Q+ ++G  P + TY  +I G     R++EA ++F  +     +P+
Sbjct: 87  LLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 146

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA----NVVTYSCLIDGYFKSQNMKSAF 117
           +  +T LI   CK G+ ++A  ++ +   +   A    +VVTY+ LIDG  K+  +  A 
Sbjct: 147 AFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEAR 206

Query: 118 DVYE-EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            V++ E  E    P+ V+Y+ +IDGLCK G +EE    FH   +    PD VTYA LI G
Sbjct: 207 QVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 266

Query: 177 Y-----------------------------------CKAGRPTEAMQLYDSMLRNGIMPD 201
           +                                   CKAGR  EA   + +M   G +  
Sbjct: 267 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 326

Query: 202 GLLLSTLAD 210
            +  S L D
Sbjct: 327 VVTYSALMD 335



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 1/162 (0%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ + FT++I+  C+E R+D+A  +  + +  G + + VTY+  IDG  K++ +  AF +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            ++M E    P  V+Y+ L+DGL K G ++EA+      ++    P + TY ++I G  K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           AGR  EA +++  ML NG  PD  + + L    L  SG  E 
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIK-GLCKSGKPEE 165



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 40/195 (20%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E ++ AA++LF ++ DRG EP++++YN II G C   +L +A   FEKL   +L P+  T
Sbjct: 340 EGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYT 399

Query: 65  FTILIDAFCKEGRMD---DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           F   +   C+  R+D   D   +F  M+ +G   N+ +YS L+DG  ++  ++ A +++ 
Sbjct: 400 FNAFLHGLCQ--RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFR 457

Query: 122 EMCENNISPNIV----------------------------------SYSILIDGLCKRGL 147
           EM    ++P++V                                  SY  L+DGL +   
Sbjct: 458 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDGLSRCER 517

Query: 148 MEEA-LYAFHCALDN 161
           MEEA L +FH  L  
Sbjct: 518 MEEARLLSFHMKLQG 532



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP++V+++++I+GLC+   ++EA      A+     PD VTY + I G CKA R  +A Q
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           L   M     +P  +  + L D  L++ 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAG 91


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 119/202 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A KLF  L DRG++ ++ +YN +I GYC   ++DEA +LFE++    LKP+++T+ 
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI A C+ GR+  A  +F +M   G    + TY  L+DG  K+ +++ A D+++ + + 
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PNI  +SIL+DG+C+ G +EEA   F     N L PD + Y ILI G C  G  +EA
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           ++L   M   G +PD +  + +
Sbjct: 481 VKLLWQMEEKGCLPDSITFNVI 502



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 120/200 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A ++   +  +G EPDI+TYNT++ G C + +L++A +LFE L    +K N
Sbjct: 261 LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +CK+ ++D+A  +F +M  KG K + VTY+ LI    +S  +++A  ++ 
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 380

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM        + +Y +L+DGLCK G +EEA+  F         P++  ++IL+ G C+AG
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG 440

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA + +D + +NG+ PD
Sbjct: 441 KLEEAWKQFDEISKNGLEPD 460



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF ++T++GL  D  TY  +I G C   +   A++L EK+     K +  T+ ++ID
Sbjct: 96  AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIID 154

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+G   +A  MFS+M+  G   +VV YS L+DG  +   +K A + ++EM    IS 
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 214

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ LI GL + GL +E  +  +  +D    PD  T+ ILI G CK G+  EA Q+ 
Sbjct: 215 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M   G  PD L  +TL +
Sbjct: 275 ELMHHKGKEPDILTYNTLMN 294



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     AL +F ++   G+ PD++ Y++++ G C   RL EA++ F+++    +  +
Sbjct: 156 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 215

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI    + G   + T   + M+++G   +  T++ LIDG  K   +  A  + E
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+I++Y+ L++GLC  G +E+A   F    D  +  +V +Y ILI GYCK  
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA +L++ M   G+ P  +  +TL
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTL 362



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RG EPD +T  T++ G    N + +AVQLF+++T   L  ++ T+ ILI+  CK  +   
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 81  ATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           A  +  KM  KG  K +V TY  +ID   K      A D++ EM    I P++V YS L+
Sbjct: 131 AIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLC+ G ++EAL  F       +  DV TY  LI G  +AG   E     + M+  G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 200 PDGLLLSTLAD 210
           PD    + L D
Sbjct: 249 PDAFTFTILID 259



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 35/206 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTII---------------------CG------ 36
           K+  +D A +LF ++  +GL+P  +TYNT+I                     CG      
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 392

Query: 37  -YCSL-------NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            YC L         L+EA+ LF+ +   + KPN   F+IL+D  C+ G++++A   F ++
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            + G + + + Y+ LI+G      +  A  +  +M E    P+ ++++++I  L K   +
Sbjct: 453 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 512

Query: 149 EEALYAFHCALDNHLLPDVVTYAILI 174
            EA+       + +  PD    ++L+
Sbjct: 513 HEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 76/138 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ LF  +     +P+I  ++ ++ G C   +L+EA + F++++   L+P+
Sbjct: 401 LCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 460

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I + ILI+  C +G + +A  +  +M EKG   + +T++ +I    K   +  A  + E
Sbjct: 461 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 520

Query: 122 EMCENNISPNIVSYSILI 139
           EM   N SP+    S+L+
Sbjct: 521 EMRNRNFSPDEAVTSMLL 538



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+KL  Q+ ++G  PD IT+N II      N + EA+QL E++      P+    ++
Sbjct: 477 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 536

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG 92
           L+     + +   A +     L+KG
Sbjct: 537 LLCLASFDPQWHAALVSLPNALQKG 561



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 34/120 (28%)

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA---- 180
           +    P+ V+ + L+ G+     + +A+  F    +  L  D  TY ILI G CKA    
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 181 ------------------------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                                         G  TEA+ ++  M+  GI+PD ++ S+L D
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 122/203 (60%), Gaps = 3/203 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALKLFG +  +G EP++ TYN +I G    +R++EA +LF  L    L+P++IT+T+ ID
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR++DA +M   M EKG   +VV+++ +I+G  K + +  A  +   M     SP
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA---GRPTEAM 187
           N +S++ LI G C+ G  ++A+  F   L   + P VVTY IL+ G CKA   GR  EA+
Sbjct: 287 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 346

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+D+M+  G +PD +  S L D
Sbjct: 347 TLFDAMIEKGRVPDVVTYSALID 369



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 115/199 (57%), Gaps = 4/199 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD ALK+F     RG  PD++TYN +I G+C  ++LDEA ++ +++    L P+ +
Sbjct: 57  KVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDVYEE 122
           T+  L++  CK GR+D+A M+   +++KG   NV+TYS LI G  +  + +  A  ++  
Sbjct: 117 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + +    P + +Y+ILIDGL K   + EA   F   + + L PD +TY + I G CKAGR
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A+ +   M   G +PD
Sbjct: 234 VEDALLMLKDMDEKGCVPD 252



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A  L+ ++   G  PD++TYNT++ G+C +  LDEA+++F+        P+ +T+ 
Sbjct: 25  RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYN 84

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+ FCK  ++D+A  +  +M+ +    +VVTY+ L++G  K+  +  A  +   + + 
Sbjct: 85  ALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IVDK 141

Query: 127 NISPNIVSYSILIDGLCK--RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             SPN+++YS LI GLC+  RG+  EAL  F   L     P+V TY ILI G  K  R  
Sbjct: 142 GFSPNVITYSTLISGLCRELRGV-SEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVN 200

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +L+  ++++G+ PD +  +   D
Sbjct: 201 EAFELFSGLVKHGLEPDAITYTVFID 226



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL +   + ++G  PD++++N +I G C   R+DEA  L   +      PN
Sbjct: 228 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 287

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN---MKSAFD 118
           +I+F  LI   C+ G+   A   F +ML++G K  VVTY+ L+DG  K++    +K A  
Sbjct: 288 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 347

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +++ M E    P++V+YS LIDGL K G +++A            +P+V TY  LI G C
Sbjct: 348 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 407

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +  EA++L+ +M+  G +PD +   T+
Sbjct: 408 GLEKVDEALELFVAMVEKGCVPDTITYGTI 437



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 111/185 (60%), Gaps = 4/185 (2%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +   G  P+ ITYN ++ G C+  R+ +A  L+E++      P+ +T+  L+  FCK G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +D+A  +F   +++G   +VVTY+ LI+G+ K+  +  A  + + M   N+ P++V+Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRN 196
           L++GLCK G ++EA       +D    P+V+TY+ LI G C+  R  +EA++L+ S+L+ 
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 197 GIMPD 201
           G  P+
Sbjct: 178 GYEPE 182



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 3/176 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  L   +  +G  P+ I++NT+ICG C   +  +A+  F+++    +KP 
Sbjct: 263 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 322

Query: 62  SITFTILIDAFCK---EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +T+ IL+D  CK   EGR+ +A  +F  M+EKG   +VVTYS LIDG  K+  +  A  
Sbjct: 323 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 382

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
           +   M      PN+ +Y+ LI GLC    ++EAL  F   ++   +PD +TY  +I
Sbjct: 383 LLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 70/123 (56%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M + G   N +TY+ L+ G      M  A  +YE M +   SP++V+Y+ L+ G CK G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++EAL  F  A+    +PDVVTY  LI G+CKA +  EA ++   M+   ++PD +  ++
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 208 LAD 210
           L +
Sbjct: 121 LVN 123



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 42/70 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L G +  +G  P++ TYN++I G C L ++DEA++LF  +      P+
Sbjct: 371 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPD 430

Query: 62  SITFTILIDA 71
           +IT+  +I A
Sbjct: 431 TITYGTIISA 440


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ AL +F  +  +G+ P+I TYN++I G C+ +R  EA  +  ++  + + PN
Sbjct: 55  LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LI+ FCKEG + +A  +   M E G + NVVTYS L++GY     +  A  +++
Sbjct: 115 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFD 174

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ SY+ILI+G CK   + EA   F+  +   L PD+V+Y  LI G C+ G
Sbjct: 175 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 234

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L+ +ML NG +PD    S L D
Sbjct: 235 RLREAHDLFKNMLTNGNLPDLCTYSILLD 263



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 113/201 (56%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA  LF ++ + G +PD++TY+TII   C   R++EA+ +F  +    + PN  T+  LI
Sbjct: 28  AAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 87

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C   R  +A+ M ++M+      N+VT+S LI+ + K  N+  A  V + M E  + 
Sbjct: 88  QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 147

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+YS L++G   +  + EA   F   +     PDV +Y ILI GYCKA R  EA QL
Sbjct: 148 PNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 207

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           ++ M+  G+ PD +  +TL D
Sbjct: 208 FNEMIHQGLTPDIVSYNTLID 228



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 118/198 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  A  +   +T+ G+EP+++TY++++ GY     + EA +LF+ +     KP+  
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +CK  R+ +A  +F++M+ +G   ++V+Y+ LIDG  +   ++ A D+++ M
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N   P++ +YSIL+DG CK+G + +A   F      +L P++V Y ILI   CK+   
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +L+  +   G+ P+
Sbjct: 307 KEARKLFSELFVQGLQPN 324



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 90/158 (56%), Gaps = 1/158 (0%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  T+T +I+  CK G    A  +F KM E G + +VVTYS +ID   K + +  A D
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++  M    ISPNI +Y+ LI GLC      EA    +  +  +++P++VT+++LI  +C
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 215
           K G   EA  +  +M   G+ P+ +  S+L + Y+LQ+
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 164



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A +LF ++  +GL PDI++YNT+I G C L RL EA  LF+ +      P+  
Sbjct: 197 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 256

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D FCK+G +  A  +F  M     K N+V Y+ LID   KS+N+K A  ++ E+
Sbjct: 257 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316

Query: 124 CENNISPNIVSYSIL 138
               + PN+  + + 
Sbjct: 317 FVQGLQPNMKHWKLF 331



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+ +G + +V TY+ +I+G  K     +A  ++++M E    P++V+YS +ID LCK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EAL  F       + P++ TY  LI+G C   R  EA  + + M+   IMP+ +  S 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 208 LAD 210
           L +
Sbjct: 121 LIN 123


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 123/207 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++ AA+K+F ++  +G++P+++TYN++I G C+  +++EA  L +++    LKPN I
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   L++ FCK   +  A  +F  M ++G   NV TY+ LID Y K +NM+ AF +Y  M
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++ +Y+ LI GLC++G +E A          HL  D++TY ILI   C  G  
Sbjct: 368 LGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEM 427

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++L D M R G+ P  L  +T+ D
Sbjct: 428 KKALRLLDEMCRKGLKPSQLTYNTMID 454



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 114/200 (57%), Gaps = 3/200 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++  R +EP +I++N +I G C + +L++A  + E +    +  N IT+  LID +C
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 74  KEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           K G+   M  A  +  +M   G   N VT++ LIDG+ K +N+ +A  V+ EM    + P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI+GLC  G + EA       +++ L P+++T+  L+ G+CK     +A +L+
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M + GI P+    + L D
Sbjct: 330 DDMPKQGITPNVTTYNILID 349



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 115/203 (56%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDE---AVQLFEKLTCVQL 58
           L K   L+ A  +   +  RG+  ++ITYNT+I GYC + ++ +   A  + +++    +
Sbjct: 173 LCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGI 232

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN +TF ILID FCK+  +  A  +F++M  +G K NVVTY+ LI+G   +  +  A  
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATA 292

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + ++M  + + PNI++++ L++G CK  ++++A   F       + P+V TY ILI  YC
Sbjct: 293 LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYC 352

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           K     +A  LY  ML  G+ PD
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPD 375



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  L  Q+ +  L+P+IIT+N ++ G+C    + +A +LF+ +    + PN  T+ 
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILIDA+CK+  M+DA  ++  ML KG   +V TY+CLI G  +  ++++A ++  EM   
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++  ++++Y+ILID LC +G M++AL          L P  +TY  +I GYCK G    A
Sbjct: 406 HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + L   M + G       L+ +A YN+   G
Sbjct: 466 LNLRSQMEKVG------RLANVATYNVLIKG 490



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 115/202 (56%), Gaps = 3/202 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK   ++   G+ P+ +T+N +I G+C    +  A+++F ++    +KPN +T+  L
Sbjct: 221 DAILK---EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G++++AT +  +M+    K N++T++ L++G+ K++ +K A +++++M +  I
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +PN+ +Y+ILID  CK   ME+A   +   L   + PDV TY  LI G C+ G    A  
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M    +  D +  + L D
Sbjct: 398 LVSEMDTKHLKADLITYNILID 419



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 16/198 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +++ A  L+  +  +G+ PD+ TYN +I G C    L+ A  L  ++    LK + I
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLI 412

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILID+ C +G M  A  +  +M  KG K + +TY+ +IDGY K  N+++A ++  +M
Sbjct: 413 TYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +     N+ +Y++LI G CK+  +E+A    +  L+  L+P+ +TY I+          
Sbjct: 473 EKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT--------- 523

Query: 184 TEAMQLYDSMLRNGIMPD 201
                  + M+  G +PD
Sbjct: 524 -------EEMMEKGFVPD 534



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 3/194 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
             + F + +D GL+  + + N ++ G   +  + +   +++++   +++P  I+F I+I+
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY---FKSQNMKSAFDVYEEMCENN 127
             CK G+++ A  +   M  +G  ANV+TY+ LIDGY    K   M  A  + +EM  + 
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG 231

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN V+++ILIDG CK   +  A+  F       + P+VVTY  LI G C  G+  EA 
Sbjct: 232 ICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT 291

Query: 188 QLYDSMLRNGIMPD 201
            L D M+ + + P+
Sbjct: 292 ALRDQMVNSCLKPN 305



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 88/149 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L+AA  L  ++  + L+ D+ITYN +I   C+   + +A++L +++    LKP+
Sbjct: 386 LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID +CKEG +  A  + S+M + G  ANV TY+ LI G+ K   ++ A  +  
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLN 505

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE 150
           EM E  + PN ++Y I+ + + ++G + +
Sbjct: 506 EMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I  + ++  Y    R     + F++ +   LK +  +   L+    K G + D   ++ +
Sbjct: 94  IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+ +  +  +++++ +I+G  K   +  A D+ E+M    +S N+++Y+ LIDG CK G 
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213

Query: 148 MEEALYAFHCALD----NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + + +Y     L     + + P+ VT+ ILI G+CK    + AM+++  M R G+ P+ +
Sbjct: 214 IGK-MYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 204 LLSTL 208
             ++L
Sbjct: 273 TYNSL 277



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 3/169 (1%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           E  Q+   ++      NSI   IL+ A+ K  R       F +  + G K +V + + L+
Sbjct: 76  EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  K   +     VY+EM    I P ++S++I+I+GLCK G + +A           + 
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195

Query: 165 PDVVTYAILIRGYCKAGRPT---EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +V+TY  LI GYCK G+     +A  +   M  +GI P+ +  + L D
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 115/198 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  + + PDI++YNT+I G C   +L EAV L  ++      PNS+T T L+D
Sbjct: 17  AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 76

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+GRMD+A  +   M +KG  A+VV Y  LI G+  + N+    ++++EM    IS 
Sbjct: 77  GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 136

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L+ GLC+ G  +EA    +   ++ + PDVVTY  LI G CK GR T AM L 
Sbjct: 137 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 196

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+  G  P  +  + L
Sbjct: 197 NLMVEKGEEPSNVTYNVL 214



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 109/195 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A++L   +  +G + D++ Y T+I G+C+   LD   +LF+++    +  N
Sbjct: 78  LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 137

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+   C+ G+  +A  + + M E G   +VVTY+ LIDG  K      A D+  
Sbjct: 138 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 197

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P+ V+Y++L+ GLCK GL+ +A       ++     DVVTY  L++G C  G
Sbjct: 198 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 257

Query: 182 RPTEAMQLYDSMLRN 196
           +  EA++L++SM  N
Sbjct: 258 KVDEALKLFNSMFDN 272



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 122/223 (54%), Gaps = 8/223 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQ 57
           L KE  +  A K+   + ++G + D++TYNT++ G C   ++DEA++LF  +     C  
Sbjct: 218 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC-- 275

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L+PN  TF +LI   CKEGR+  A  +  KM++KG   N+VTY+ L+ G  K+  +K A 
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRG 176
           ++++++ +    PN  +YSILIDG CK  ++  A   F C +  H L P +  Y  L+  
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF-CEMRTHGLNPALFDYNTLMAS 394

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
            CK G   +A  L+  M      PD +  +T+ D  L++   Q
Sbjct: 395 LCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ 437



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 109/206 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +  A++L+ Q+ D G  P+  TY+ +I G+C +  L+ A  LF ++    L P  
Sbjct: 326 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 385

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  L+ + CKEG ++ A  +F +M     + ++++++ +IDG  K+ + +   ++  +
Sbjct: 386 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMK 445

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+ +++S LI+ L K G ++EA  A    + +   PD + Y  L++G    G 
Sbjct: 446 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 505

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            TE + L   M   G + D  ++ST+
Sbjct: 506 TTEIINLLHQMAAKGTVLDRKIVSTI 531



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 1/193 (0%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++ G C    + EA+ L  ++    + P+ +++  LI+  CK  ++ +A  +  +M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   N VT + L+DG  K   M  A ++ E M +     ++V Y  LI G C  G ++ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               F   L   +  +VVTY+ L+ G C+ G+  EA  + ++M  +GI PD +  + L D
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 211 YNLQSSGSQEHCI 223
             L   G   H +
Sbjct: 182 -GLCKDGRATHAM 193



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF ++   GL P +  YNT++   C    L++A  LF+++     +P+ I+F  
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G       +  KM+E G + + +T+S LI+   K   +  A    E M  + 
Sbjct: 426 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+ + Y  L+ GL  +G   E +   H       + D    + ++   C + +  + M
Sbjct: 486 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVM 545

Query: 188 QLYDSMLR 195
           +L  +  +
Sbjct: 546 ELLPTFFQ 553



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 61/122 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ A  LF ++ +   EPDII++NT+I G           +L  K+  + L+P+
Sbjct: 395 LCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPD 454

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF+ LI+   K G +D+A     +M+  G   + + Y  L+ G     +     ++  
Sbjct: 455 ALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLH 514

Query: 122 EM 123
           +M
Sbjct: 515 QM 516


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 121/204 (59%), Gaps = 4/204 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++L G++ D    PD+ITY T++  +C + RLD+A +LF+++   +L P+ +TFT 
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  C EGRM+DA  +  ++  +G    + TY+C++DGY KS  ++ A ++  +     
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP---DVVTYAILIRGYCKAGRPT 184
             PN V+Y+IL+ G C+ G  ++AL      L++   P    V  YAI++   C+ GR  
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLD-QLNSEGGPCPTSVAMYAIILDALCRDGRTD 481

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +A+Q Y+ M++ G +P     +T+
Sbjct: 482 DAVQFYEEMIQRGYVPAAATFATV 505



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 33/224 (14%)

Query: 7   HLDAALKLF-GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK------ 59
            LD A+ L  G++T RG  PDI+TY+T+I G C   RL +AV +FE+++C          
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSL 293

Query: 60  --------------------------PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
                                     P+ IT+T L+ AFCK GR+DDA  +F +M+    
Sbjct: 294 IGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKL 353

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
             +VVT++ L+DG      M+ A ++ EE+      P I +Y+ ++DG CK   + +A  
Sbjct: 354 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE 413

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
                     +P+ VTY IL+ G C+AGR  +A+Q  D +   G
Sbjct: 414 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 11/211 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL ++ Q+ D    PD +TY  ++ G     RL +AVQ+ +++   +  P+
Sbjct: 125 LCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPD 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VY 120
           + T T+++ + C   R+DDA  +  +ML +G  AN +TYS L+DG  K + +  A   + 
Sbjct: 184 NTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLL 243

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH---CALDNHLLPDVVTYAILIRGY 177
            E+     +P+IV+YS +IDGLCK G + +A+  F    CA      P  +TY  LI GY
Sbjct: 244 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA------PTAITYNSLIGGY 297

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           C+AG   EA++L   M+ +   PD +  +TL
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 113/195 (57%), Gaps = 4/195 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSITF 65
            +D A +L  ++  RG+  + ITY+ ++ G C   RLDEAV L   ++T     P+ +T+
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTY 258

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + +ID  CK GR+ DA  +F +M    P A  +TY+ LI GY ++ +M  A  +  +M +
Sbjct: 259 STVIDGLCKAGRLRDAVDIFEEM-SCAPTA--ITYNSLIGGYCRAGDMDEAIRLLGKMVD 315

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +N +P++++Y+ L+   CK G +++A   F   + N L PDVVT+  L+ G C  GR  +
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375

Query: 186 AMQLYDSMLRNGIMP 200
           A++L + + R G  P
Sbjct: 376 ALELLEEITRRGCPP 390



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 7/215 (3%)

Query: 1   MLIKECHLDAALKLFG-----QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           ++++  H  A L+  G     ++ DRGL PD +  NTI+   C       A+ LF+K+  
Sbjct: 15  VVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAE 74

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           +    N  T+  LI   CK   +D+A  +   M  +G     + ++ +I G  ++  ++ 
Sbjct: 75  LG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRH 133

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  VY +M + +  P+ ++Y+ L+ GL K G + +A+      +    +PD  T  ++++
Sbjct: 134 ALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQ 192

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             C   R  +A +L + ML  G+  + +  S L D
Sbjct: 193 SLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 227



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 2/150 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-PNS 62
           K   +  A +L      RG  P+ +TYN ++ G C   R D+A+Q  ++L       P S
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 463

Query: 63  IT-FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  + I++DA C++GR DDA   + +M+++G      T++ ++    K+   + A ++ E
Sbjct: 464 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 523

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM +   +P   +   ++   C+ G++++A
Sbjct: 524 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 2/117 (1%)

Query: 9   DAALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D AL+   QL   G      +  Y  I+   C   R D+AVQ +E++      P + TF 
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ A CK  +   A  +  +M++ G      T   ++  Y ++  ++ A ++  E+
Sbjct: 504 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 43/87 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++   D A++ + ++  RG  P   T+ T++   C  ++  +A +L E++      P 
Sbjct: 474 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM 88
             T   ++ A+C+ G +  A  + S++
Sbjct: 534 PGTCDAVVSAYCRAGMIQKADELASEL 560


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 119/196 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++  + + PD+ TYN +I G+C + +L +A+ LF K+T   + P+  TF IL+D
Sbjct: 260 AFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 319

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFCKEGR+ +A    + M+++G K +VVTY+ L+D Y     +  A  ++  M    ++ 
Sbjct: 320 AFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTA 379

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ SYSI+I+  CK  ++++A+  F       + P+V+TY+ LI G CK+GR + A++L 
Sbjct: 380 NVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELN 439

Query: 191 DSMLRNGIMPDGLLLS 206
           D M   G  PD + L+
Sbjct: 440 DEMHDRGQQPDIITLT 455



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 16/216 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A      +  +G++PD++TYN+++  YC +N +++A  +F  ++   +  N  
Sbjct: 323 KEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVR 382

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++I+I+ FCK   +D A  +F +M  K    NV+TYS LIDG  KS  +  A ++ +EM
Sbjct: 383 SYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEM 442

Query: 124 C----------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
                            +  I PN+ +Y+ILIDGLCK G +E+A   F   L       V
Sbjct: 443 HDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITV 502

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            TY ++I G+C  G   EAM L   M  N  +P+ +
Sbjct: 503 NTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAV 538



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 103/186 (55%), Gaps = 16/186 (8%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +F  ++ RG+  ++ +Y+ +I  +C +  +D+A++LF+++   Q+ PN IT++
Sbjct: 361 EVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYS 420

Query: 67  ILIDAFCKEGRMD----------------DATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
            LID  CK GR+                 D   +  ++ ++G + N+ TY+ LIDG  K 
Sbjct: 421 SLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKG 480

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             ++ A +++E++     +  + +Y+++I G C +GL +EA+       DN  +P+ VTY
Sbjct: 481 GRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTY 540

Query: 171 AILIRG 176
            I+IR 
Sbjct: 541 EIIIRS 546



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 16/151 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-----------CV 56
           +D A+KLF ++  + + P++ITY+++I G C   R+  A++L +++              
Sbjct: 397 VDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTR 456

Query: 57  QLK-----PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ 111
           QLK     PN  T+TILID  CK GR++DA  +F  +L KG    V TY+ +I G+    
Sbjct: 457 QLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKG 516

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
               A  +  +M +N   PN V+Y I+I  L
Sbjct: 517 LFDEAMTLLSKMKDNCCIPNAVTYEIIIRSL 547



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           + L  QL D+G+ P++ TY  +I G C   RL++A  +FE L          T+T++I  
Sbjct: 452 ITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHG 511

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           FC +G  D+A  + SKM +     N VTY  +I   F
Sbjct: 512 FCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLF 548



 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +F  L  +G    + TY  +I G+C+    DEA+ L  K+      PN
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536

Query: 62  SITFTILIDAFCKEGRMDDATMMFSK 87
           ++T+ I+I +       D A   F K
Sbjct: 537 AVTYEIIIRSLFDNDENDKAENFFVK 562


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 122/210 (58%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  K   LD A +LF  +TDRG  PDI TYN +I G C  NR+D+A QL E++T     P
Sbjct: 385 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPP 444

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  ++   CK  ++D+A  ++  +   G   +VVT S LIDG  KS+ +  A  + 
Sbjct: 445 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 504

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM  N  +P++V+Y+ILI G CK   ++++L  F   LD   +P V+TY+I+I   CK+
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS 564

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  +   L  +ML  G+ PD ++ +++ D
Sbjct: 565 ARVRDGCMLLKTMLERGVTPDAIVYTSVID 594



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A KL  ++   G  PD++ Y  +I G+C  ++LD+++  F ++      P 
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++I+ID  CK  R+ D  M+   MLE+G   + + Y+ +IDG  KS +   A+++Y+
Sbjct: 551 VITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYK 610

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +   +P +V+Y++L+D LCK   ++EA++       +  LPD VTY  +  G+ K+ 
Sbjct: 611 LMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSA 670

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A +L+ +M   G  P   + S L
Sbjct: 671 EHDKAFRLFQAMKSRGCSPTPFMYSLL 697



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +   + + G  P+++TYNT+I G+C L  +DEAV LF ++      P+
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILID +CK+ R  D   +  +M++ G + N +TY+ L+D   KS     AF++ +
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P+  +++++ID  CK G ++ A   F    D   LPD+ TY I+I G C+A 
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A QL + M   G  PD
Sbjct: 426 RIDDARQLLERMTEAGCPPD 445



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 123/245 (50%), Gaps = 35/245 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----------TCV 56
            +D A +L  ++T+ G  PD++TYN+I+ G C  +++DEA +++E L          TC 
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485

Query: 57  QL-------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
            L                          P+ + +TILI  FCK  ++D +   FS+ML+K
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G    V+TYS +ID   KS  ++    + + M E  ++P+ + Y+ +IDGLCK    +EA
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              +         P VVTY +L+   CK  R  EA+ L + M  +G +PD +  +++ D 
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDG 665

Query: 212 NLQSS 216
             +S+
Sbjct: 666 FWKSA 670



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 37/244 (15%)

Query: 8   LDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           LD A+K F   T + G +    T N ++  +    +  EA  LF+   C    P+SIT++
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 67  ILIDAFCK-----------------------------------EGRMDDATMMFSKMLEK 91
            LI+ FCK                                    GR+D A + +  M ++
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QR 230

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               +V+TY+ L+D   KS  +  A  + E+M E   +PN+V+Y+ LI+G CK G M+EA
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           +  F+  L+N   PDV TY ILI GYCK  RP +  +L   M++ G  P+ +  +TL D 
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350

Query: 212 NLQS 215
            ++S
Sbjct: 351 LVKS 354



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 116/222 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  L   +  R  +P   T+N +I  +C + +LD A +LF+ +T     P+
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 410

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   C+  R+DDA  +  +M E G   +VVTY+ ++ G  K+  +  A++VYE
Sbjct: 411 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 470

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +       ++V+ S LIDGLCK   +++A         N   PDVV Y ILI G+CKA 
Sbjct: 471 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 530

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  +++  +  ML  G +P  +  S + D   +S+  ++ C+
Sbjct: 531 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCM 572



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 94/202 (46%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD +L  F ++ D+G  P +ITY+ +I   C   R+ +   L + +    + P++I +T
Sbjct: 531 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYT 590

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID  CK    D+A  ++  M + G    VVTY+ L+D   K   +  A  + E M  +
Sbjct: 591 SVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESD 650

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+Y+ + DG  K    ++A   F         P    Y++L+       +  +A
Sbjct: 651 GCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQA 710

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M++++  L  G   D  +  TL
Sbjct: 711 MEIWEEALEAGADVDPEISRTL 732



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +     L   + +RG+ PD I Y ++I G C  +  DEA +L++ +      P 
Sbjct: 561 LCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPT 620

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +L+D  CK  R+D+A  +   M   G   + VTY+ + DG++KS     AF +++
Sbjct: 621 VVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
            M     SP    YS+L+  L     M++A+  +  AL+
Sbjct: 681 AMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALE 719



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L   +   G  PD +TYN++  G+      D+A +LF+ +      P 
Sbjct: 631 LCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPT 690

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
              +++L+     E +MD A  ++ + LE G
Sbjct: 691 PFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A KLF ++ D G+ P  +TYN +I G C    LDEA++LF+ +     +P+
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILIDA CK G+MD+A  +  +M + G   +VVTYS LI G      +  A  + E
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P +V+ + LI GLCK G ++EA       + +   PDVVTY  L+ G+C+AG
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A +L   M+  G+ P+
Sbjct: 375 QTERARELLSDMVARGLAPN 394



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 117/206 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L  ++TD G  PD++TY+T+I G CS+ R+D+A  L E +   Q KP  +
Sbjct: 267 KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   LI   CK GR+ +A  +   M+  G   +VVTY+ L+ G+ ++   + A ++  +M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++PN+V+Y+ L+ GLCK   + EA   F     +   P++ TY  LI G+C AG+ 
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
              ++L+  M+  GI PD ++  TLA
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLA 472



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL LF ++   G  P+  ++NTII G C  +++D+A Q+F ++    + P+
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S ++ ILID   K G++++A  +F +ML+ G   + VTY+ +I G   +  +  A ++++
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+  +++ILID  CKRG M+EA        D+  +PDVVTY+ LI G C   
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A  L + M++    P  +  +TL
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTL 331



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 113/202 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  LF +L   G+ P  + Y ++I G C  N  D+A +LF  +      P+
Sbjct: 20  LAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ++IDA CK G +++A  +  KM+E G   +VVTY+ ++DG  KS  ++ A  ++ 
Sbjct: 80  PVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFN 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +PN  S++ +I GLC++  +++A   FH      + PD  +Y ILI G  KAG
Sbjct: 140 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAG 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
           +  EA +L+  ML +GI P  +
Sbjct: 200 KLNEAYKLFRRMLDSGITPSAV 221



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 106/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +LF  +  RG  P  +TYN II   C    L+EA  L +K+      P+ +T+  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D  CK GR+++A ++F++M   G   N  +++ +I G  +   +  A  V+ EM   +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+  SY ILIDGL K G + EA   F   LD+ + P  VTY ++I G C A    EA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+ SM   G  P     + L D
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILID 263



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D A ++F ++  R + PD  +Y  +I G     +L+EA +LF ++    + P+
Sbjct: 160 LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ ++I   C    +D+A  +F  M  KG + +  T++ LID + K   M  AF + +
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++   P++V+YS LI GLC    +++A +     +     P VVT   LI G CKAG
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA ++ D+M+ +G  PD +  +TL
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTL 366



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A  L  ++ + G  PD++TYNT++ G C   R++EA+ LF ++  +   PN  
Sbjct: 92  KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRR 151

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +   +I   C++ ++D A  +F +M  +    +  +Y  LIDG  K+  +  A+ ++  M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ I+P+ V+Y+++I G+C    ++EAL  F         P   T+ ILI  +CK G+ 
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +L   M  +G +PD +  STL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTL 296



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+S ++ ILID   K G+++DA  +F K+L  G   + V Y+ LI G   + +   A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           +++ +M      P+ V+Y+++ID  CKRG++EEA       +++  +PDVVTY  ++ G 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK+GR  EA+ L++ M R G  P+
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPN 149



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 4/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++   +   G  PD++TYNT++ G+C   + + A +L   +    L PN
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+   CK  R+ +A  +F++M   G   N+ TY+ LI G+  +  +     ++ 
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYC 178
           EM    ISP+ V Y  L   LCK G    AL        +L +    D V Y   + G  
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLL 513

Query: 179 KAGRPTEAMQLYDSMLRNGIMP 200
            AG+   A+     M+R G +P
Sbjct: 514 DAGKMEMALGFVRDMVRGGQLP 535



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 13/209 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +F Q+   G  P++ TY  +I G+CS  ++D  ++LF ++ C  + P+
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE--KGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            + +  L    CK GR   A  +  +  E  +        Y   +DG   +  M+ A   
Sbjct: 465 HVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGF 524

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M      P     + L+ GLCK G   EA       +D       + Y    RG  K
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD-------LAYGGKARG--K 575

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A +  E M      + +G++    LLSTL
Sbjct: 576 AAKFVEEMVGKGYEIEDGVLKP--LLSTL 602



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%)

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E N+SP+  SY ILIDGL K G + +A   F   L + + P  V Y  LI G C A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             +A +L+  M R G  P  +  + + D + +    +E C
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEAC 100


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 120/200 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++T +G+  D++TY+T+I G+C   +L EA+ L  ++    + PN  T+ IL+D
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG++ +A  + + ML+   K +V+TYS L+DGYF    +K A  V+  M    ++P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ILI+G CK  +++EAL  F      +++P +VTY+ LI G CK+GR      L 
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G   D +  S+L D
Sbjct: 398 DEMRDRGQPADVITYSSLID 417



 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 115/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A  +F  ++  G+ PD+ TY  +I G+C    +DEA+ LF+++    + P  +T++ 
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+     +  +M ++G  A+V+TYS LIDG  K+ ++  A  ++ +M +  
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PNI +++IL+DGLCK G +++A   F   L      +V TY ++I G+CK G   EA+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   M  NG +P+     T+
Sbjct: 500 TMLSKMEDNGCIPNAFTFETI 520



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 115/196 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +    ++PD+ITY+T++ GY  +  + +A  +F  ++ + + P+
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILI+ FCK   +D+A  +F +M +K     +VTYS LIDG  KS  +   +D+ +
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +     ++++YS LIDGLCK G ++ A+  F+   D  + P++ T+ IL+ G CK G
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A +++  +L  G
Sbjct: 459 RLKDAQEVFQDLLTKG 474



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 106/195 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L  +G + + ++Y T+I G C +     A++L  K+     KPN   ++
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 203

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  A+VVTYS LI G+     +K A  +  EM   
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+ +Y+IL+D LCK G ++EA       L   + PDV+TY+ L+ GY       +A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M   G+ PD
Sbjct: 324 QHVFNAMSLMGVTPD 338



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH+        +  ++  RG  PD +T NT+I G C   ++ +A+   +KL     + N 
Sbjct: 105 CHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  LI+  CK G    A  +  K+  +  K NV  YS +ID   K Q +  A+ ++ E
Sbjct: 165 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    IS ++V+YS LI G C  G ++EA+   +  +   + P+V TY IL+   CK G+
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  +   ML+  + PD +  STL D
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMD 312



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 107/192 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++  + + P I+TY+++I G C   R+     L +++       + IT++ 
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSS 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A  +F+KM ++  + N+ T++ L+DG  K   +K A +V++++    
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N+ +Y+++I+G CK+GL+EEAL       DN  +P+  T+  +I    K     +A 
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 535 KLLRQMIARGLL 546



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L  +L  +G++PD+IT N +I  +C + ++     +  K+      P+++T  
Sbjct: 74  HYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLN 133

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C +G++  A     K+L +G + N V+Y+ LI+G  K  + + A  +  ++   
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 193

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+  YS +ID LCK  L+ EA   F       +  DVVTY+ LI G+C  G+  EA
Sbjct: 194 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEA 253

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M+   I P+    + L D
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVD 277



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 81/144 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +     L  ++ DRG   D+ITY+++I G C    LD A+ LF K+   +++PN
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TFTIL+D  CK GR+ DA  +F  +L KG   NV TY+ +I+G+ K   ++ A  +  
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M +N   PN  ++  +I  L K+
Sbjct: 504 KMEDNGCIPNAFTFETIIIALFKK 527



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 2/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A+  F ++      P II +N I+  +  +     AV L  +L    ++P+ IT  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+ FC  G++     + +K+L++G   + VT + LI G      +K A   ++++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTE 185
               N VSY+ LI+G+CK G    A+      +D  L  P+V  Y+ +I   CK    +E
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLR-KIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  L+  M   GI  D +  STL
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTL 240



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 86/172 (50%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           S+  +D+AV  F ++ C++  P  I F  ++D+F K      A  +  ++  KG + +++
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + LI+ +     +   F V  ++ +    P+ V+ + LI GLC +G +++AL+     
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L      + V+YA LI G CK G    A++L   +      P+  + ST+ D
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ LF ++ D+ + P+I T+  ++ G C   RL +A ++F+ L       N
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ++I+  CK+G +++A  M SKM + G   N  T+  +I   FK      A  +  
Sbjct: 479 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 538

Query: 122 EM 123
           +M
Sbjct: 539 QM 540



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F  L  +G   ++ TYN +I G+C    L+EA+ +  K+      PN
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           + TF  +I A  K+   D A  +  +M+ +G
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARG 544


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 124/206 (60%), Gaps = 6/206 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A   + ++  + + P ++TYNT+ICG C + +L +A+ L  K+    + P   TF+I
Sbjct: 225 VNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSI 284

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DAFCKEG++ +A  +F  M++K  K N+VTY+ L++GY     +  A  ++  M +  
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++P++ SYSI+I G CK  +++EA+  F   HC     + PDVVTY  LI G CK+GR +
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCK---QIFPDVVTYNSLIDGLCKSGRIS 401

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A++L   M   G  P+ +  ++L D
Sbjct: 402 YALKLIGEMHDRGQPPNIITYNSLLD 427



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 110/174 (63%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F  +   G+ PD+ +Y+ +I G+C +  +DEA++LFE++ C Q+ P+ +T+  
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+  A  +  +M ++G   N++TY+ L+D   K+ ++  A ++  ++ ++N
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           I P++ +Y+ILI+GLCK G +++A   F   L N    DV TY  +I+G+CK G
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 117/194 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +  + ++P+I+TYN+++ GYC +N +++A  +F  +  + + P+  
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVH 350

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++I+I  FCK   +D+A  +F +M  K    +VVTY+ LIDG  KS  +  A  +  EM
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PNI++Y+ L+D LCK   +++A+       D+++ P V TY ILI G CK+GR 
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470

Query: 184 TEAMQLYDSMLRNG 197
            +A ++++ +L NG
Sbjct: 471 KDAQKVFEDVLVNG 484



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   +  +F  +  +G EPD IT  T+I G C    + +A+   +K+  +  + N +++ 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G+   A  M  ++  K  + +VV Y+ +IDG  K + +  AFD Y EM   
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P +V+Y+ LI GLC  G +++A+   H  +  ++ P V T++IL+  +CK G+  EA
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++  M++  + P+ +  ++L +
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMN 322



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 111/201 (55%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL++  ++  + +  D++ YNTII G C    +++A   + ++   ++ P  +T+  LI
Sbjct: 192 AALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI 251

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C  G++ DA  +  KM+ +     V T+S L+D + K   +K A +V+  M + ++ 
Sbjct: 252 CGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVK 311

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PNIV+Y+ L++G C    + +A   F+      + PDV +Y+I+I G+CK     EAM+L
Sbjct: 312 PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL 371

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           ++ M    I PD +  ++L D
Sbjct: 372 FEEMHCKQIFPDVVTYNSLID 392



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 86/147 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KLF ++  + + PD++TYN++I G C   R+  A++L  ++      PN IT+  
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA CK   +D A  + +K+ +   + +V TY+ LI+G  KS  +K A  V+E++  N 
Sbjct: 425 LLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNG 484

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYA 154
            + ++ +Y+ +I G CK+G +    + 
Sbjct: 485 YNIDVYTYNTMIKGFCKKGFVIPQFWT 511



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 99/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    + L  Q+   G+  +++T + +I  +  L     +  +F  +     +P+
Sbjct: 79  LVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPD 138

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT T LI   C +G +  A     K+L  G + N V+Y  LI+G  K    K+A ++  
Sbjct: 139 AITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLR 198

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    +  ++V Y+ +IDG+CK  L+ +A   +   +   + P VVTY  LI G C  G
Sbjct: 199 RIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMG 258

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L   M+   I P     S L D
Sbjct: 259 QLKDAIGLLHKMILENINPTVYTFSILVD 287



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 66/108 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  ALKL G++ DRG  P+IITYN+++   C  + +D+A++L  KL    ++P+
Sbjct: 394 LCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
             T+ ILI+  CK GR+ DA  +F  +L  G   +V TY+ +I G+ K
Sbjct: 454 VCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  +   P II +  I+      N     V L  ++    +  N +T +ILI+ F + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              +  +FS +L+KG + + +T + LI G     ++  A   ++++       N VSY  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           LI+GLCK G  + AL      +D  L+  DVV Y  +I G CK     +A   Y  M+  
Sbjct: 180 LINGLCKVGQTKAALEMLR-RIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 197 GIMPDGLLLSTL 208
            I P  +  +TL
Sbjct: 239 RICPTVVTYNTL 250



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A++L  +L D  ++P + TYN +I G C   RL +A ++FE +       +
Sbjct: 429 LCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNID 488

Query: 62  SITFTILIDAFCKEG 76
             T+  +I  FCK+G
Sbjct: 489 VYTYNTMIKGFCKKG 503



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 68  LIDAFCKEGRMDDATMMFSKML-----------EKGPKANVVTYSCLIDGYFKSQNMKSA 116
           LI  F       ++T ++S++            +K P  +++ +  ++    K+ +    
Sbjct: 29  LIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIV 88

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             ++ +M  N I+ N+V+ SILI+   + G    +   F   L     PD +T   LI+G
Sbjct: 89  VSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKG 148

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            C  G   +A+  +D +L  G   + +   TL +
Sbjct: 149 LCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 125/210 (59%), Gaps = 11/210 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL L  +++  GL+P+++TYN +I G+C    L EA ++ + +    L PN ITF  
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA+ K GRMDDA ++ S ML+ G   NV TY+CLI G+ +  N+K A  + +EM  N 
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-------PDVVTYAILIRGYCKA 180
           +  ++V+Y+IL+D LCK+G   +A+      LD   L        ++VTY +LI+G+C  
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVR----LLDEMTLMEKKGRRANIVTYNVLIKGFCNK 525

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  EA +L + ML  G++P+      L D
Sbjct: 526 GKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  +     ++ ++  R +  +++T++ +I G C + +  +A  + E +      P+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +ID +CK G+M  A  +  +M+ K    N +T++ LIDG+ + +N+ +A  V+E
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN+V+Y+ LI+GLC  G ++EAL          L P+VVTY  LI G+CK  
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA ++ D + + G+ P+ +  +TL D
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLID 412



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 105/180 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P +ITYNTII GYC   ++ +A  L +++   ++ PN ITF ILID FC++  +  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M  +G + NVVTY+ LI+G   +  +  A  + ++M    + PN+V+Y+ LI+G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK+ +++EA           L P+V+T+  LI  Y KAGR  +A  L   ML  G+ P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 117/202 (57%), Gaps = 3/202 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK   ++  + + P+ IT+N +I G+C    +  A ++FE++    L+PN +T+  L
Sbjct: 284 DALLK---EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G++D+A  +  KM   G K NVVTY+ LI+G+ K + +K A ++ +++ +  +
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +PN+++++ LID   K G M++A       LD  + P+V TY  LI G+C+ G   EA +
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M  NG+  D +  + L D
Sbjct: 461 LAKEMEGNGLKADLVTYNILVD 482



 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A ++   +  RGL P++IT+NT+I  Y    R+D+A  L   +    + PN  
Sbjct: 381 KKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVS 440

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FC+EG + +A  +  +M   G KA++VTY+ L+D   K    + A  + +EM
Sbjct: 441 TYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500

Query: 124 C---ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
               +     NIV+Y++LI G C +G +EEA    +  L+  L+P+  TY I        
Sbjct: 501 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI-------- 552

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                   L D M+  G +PD
Sbjct: 553 --------LRDEMMEKGFIPD 565



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 100/199 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +D AL+ F +  D G     ++ N ++       R+     +++++   ++  N 
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TF ++I+  CK G+   A  +   M   G   +V+TY+ +IDGY K+  M  A  + +E
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN ++++ILIDG C+   +  A   F       L P+VVTY  LI G C  G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA+ L D M   G+ P+
Sbjct: 350 LDEALGLQDKMSGMGLKPN 368



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 97/181 (53%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I  + ++  Y     +D A++ F++      + ++++   ++ +  KEGR+     ++ +
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+ +    NVVT+  +I+G  K    + A DV E+M     SP++++Y+ +IDG CK G 
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M +A       +   + P+ +T+ ILI G+C+    T A ++++ M R G+ P+ +  ++
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 208 L 208
           L
Sbjct: 340 L 340



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NSI   +L+ A+ K G MD A   F +  + G + + ++ + ++    K   +     VY
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    I  N+V++ ++I+GLCK G  ++A             P V+TY  +I GYCKA
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  +A  L   M+   I P+ +  + L D
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILID 307


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 124/197 (62%), Gaps = 6/197 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A  L+ ++  + + PD++TY+++I G+C + +L  AV LF ++    + PN  
Sbjct: 210 KDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVY 269

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ILID FCKEG++ +A  + + M++K  K +VVTY+ L+DGY   + +  A  ++  M
Sbjct: 270 TFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM 329

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKA 180
            +  ++P++ SYSI+I+G CK  +++EA+  F   HC     + P+VVTY  L+ G CK+
Sbjct: 330 AQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHC---KQIFPNVVTYNSLVDGLCKS 386

Query: 181 GRPTEAMQLYDSMLRNG 197
           GR + A++L D M   G
Sbjct: 387 GRTSCALELVDEMHDRG 403



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 117/202 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  LF  +  RG+ PD+ +Y+ +I G+C +  +DEA++LFE++ C Q+ PN +T+ 
Sbjct: 318 QVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYN 377

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK GR   A  +  +M ++G  +N++TY+ ++D   K+ ++  A  +  ++ E 
Sbjct: 378 SLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEK 437

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+I +Y++LI+GLCK G +++A   F   L     P++ TY  LI G+C  G   E 
Sbjct: 438 GIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEG 497

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + +   M  NG +P+ +    L
Sbjct: 498 LAMLSKMKDNGCIPNAITYEIL 519



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 2/197 (1%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E H   AL    ++  +G + D ++Y T+I G C +     AVQL  ++    ++PN + 
Sbjct: 143 EVH--KALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVM 200

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ +ID+ CK+  ++DA  ++ +M+ K    +VVTYS LI G+     +K A D++  M 
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            +NI+PN+ ++SILIDG CK G + EA       +  ++  DVVTY  L+ GYC   +  
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320

Query: 185 EAMQLYDSMLRNGIMPD 201
           +A  L++ M + G+ PD
Sbjct: 321 KAKSLFNVMAQRGVTPD 337



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 114/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +  + ++ D++TYN+++ GYC + ++++A  LF  +    + P+  
Sbjct: 280 KEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVW 339

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++I+I+ FCK   +D+A  +F +M  K    NVVTY+ L+DG  KS     A ++ +EM
Sbjct: 340 SYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEM 399

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +     NI++Y+ ++D +CK   +++A+       +  + PD+ TY +LI G CK GR 
Sbjct: 400 HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRL 459

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A ++++ +L  G  P+
Sbjct: 460 DDAQKVFEDLLVKGYSPN 477



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 112/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  +  +F ++  +G  PD +T+  +I G C    + +A+   +K+     + + +++ 
Sbjct: 108 HIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYG 167

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  C+ G    A  +  ++  K  + NVV YS +ID   K + +  AFD+Y EM   
Sbjct: 168 TLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK 227

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP++V+YS LI G C  G ++ A+  F+  + +++ P+V T++ILI G+CK G+  EA
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +   M++  +  D +  ++L D
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMD 311



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 108/192 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KLF ++  + + P+++TYN+++ G C   R   A++L +++       N IT+  
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK   +D A ++ +K+ EKG + ++ TY+ LI+G  K   +  A  V+E++    
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPNI +Y+ LI+G C +G  +E L       DN  +P+ +TY ILI    +     +A 
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAE 533

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 534 KLLREMIARGLL 545



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      AL L  Q+   G++PD IT N ++  +  L  +  +  +F K+      P+
Sbjct: 68  LLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPD 127

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TFTILI   C +G +  A     K++ +G + + V+Y  LI+G  +    K+A  +  
Sbjct: 128 AVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLR 187

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    + PN+V YS +ID +CK  L+ +A   +   +   + PDVVTY+ LI G+C  G
Sbjct: 188 RVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVG 247

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A+ L++ M+ + I P+    S L D
Sbjct: 248 KLKYAVDLFNRMISDNINPNVYTFSILID 276



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 84/150 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      AL+L  ++ DRG   +IITYN+I+   C  N +D+A+ L  K+    ++P+
Sbjct: 383 LCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPD 442

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T+LI+  CK GR+DDA  +F  +L KG   N+ TY+ LI+G+           +  
Sbjct: 443 IFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLS 502

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M +N   PN ++Y ILI  L ++   ++A
Sbjct: 503 KMKDNGCIPNAITYEILIHSLFEKDENDKA 532



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  H+D A+ L  ++ ++G++PDI TY  +I G C + RLD+A ++FE L      PN  
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIY 479

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI+ FC +G  D+   M SKM + G   N +TY  LI   F+      A  +  EM
Sbjct: 480 TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 89/184 (48%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P  I +  I+       +   A+ L +++    +KP+ IT  +L++ F + G +  +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+K+L+KG   + VT++ LI G      +  A   ++++       + VSY  LI+GLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G  + A+          + P+VV Y+ +I   CK     +A  LY  M+   I PD + 
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 205 LSTL 208
            S+L
Sbjct: 236 YSSL 239



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A K+F  L  +G  P+I TY ++I G+C+    DE + +  K+      PN
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +IT+ ILI +  ++   D A  +  +M+ +G
Sbjct: 513 AITYEILIHSLFEKDENDKAEKLLREMIARG 543


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL    ++  RG++PD   YN ++ G C   +++EA  LFEK+   ++ PN
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK  R++ A  +F +M  KG     V+Y+ LIDG+ K +++ +A DV++
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +N  PN+V+Y+ LIDGL K G ++ A       +   + P+V TY+ LI G+CK  
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           R  EA +L + M+  GI P      T+  YN+
Sbjct: 304 RVDEAHKLLEQMVTQGIAP------TVVTYNI 329



 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 116/217 (53%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +LF ++  +G  P  ++YNT+I G+C    L  A  +F+K+      PN
Sbjct: 194 LCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPN 253

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID   K G++  A  +   M++KG   NV TYSCLIDG+ K + +  A  + E
Sbjct: 254 VVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE 313

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I+P +V+Y+IL++ LC+   +E+A   F         P VVTY  L+R  C   
Sbjct: 314 QMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHK 373

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           +   A +LY  M+  G  PD +   TLA + L  +G 
Sbjct: 374 QLDGAHRLYAEMIAKGCPPDAITYDTLA-WGLTRAGK 409



 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A  LF ++  + + P+++TYNT+I G C   R++ A +LF+++      P 
Sbjct: 159 LCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT 218

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  LID FCK+  +  A  +F KM+      NVVTY+ LIDG  KS  +++A +V +
Sbjct: 219 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++PN+ +YS LIDG CK   ++EA       +   + P VVTY IL+   C+A 
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A +L+  M +    P  +  +TL
Sbjct: 339 KLEDAFKLFRGMAQRRCHPTVVTYNTL 365



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 110/186 (59%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD +TY  I+   C   R+D+A+   E++    +KP++  +  ++   C+E ++++A ++
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F KM+++    NVVTY+ LI+G  K+  +++A+++++EM      P  VSY+ LIDG CK
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +  +  A   F   + ++ +P+VVTY  LI G  K+G+   A ++ D M++ G+ P+   
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291

Query: 205 LSTLAD 210
            S L D
Sbjct: 292 YSCLID 297



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 117/217 (53%), Gaps = 2/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + D A KL   +  +  +   I Y+TII   C LNR++EA +L EK+      P+
Sbjct: 55  LCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPD 113

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +++  CK  R+DDA     +M  +G K +   Y+ ++ G  + + ++ A  ++E
Sbjct: 114 ALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFE 173

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I+PN+V+Y+ LI+GLCK   +E A   F        +P  V+Y  LI G+CK  
Sbjct: 174 KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK 233

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
               A  ++D M+R+  +P+ +  +TL D  L  SG 
Sbjct: 234 DLVAAKDVFDKMVRSNCVPNVVTYTTLID-GLSKSGK 269



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+   +++  + + G       Y  +I   C +   DEA +L   +   + K  +I
Sbjct: 22  KAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAI 81

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ +I+  CK  R+++A  +  KM    P  + +TY  +++   K++ +  A    EEM
Sbjct: 82  AYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRIDDALATVEEM 140

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+   Y+ ++ GLC+   +EEA   F   +   + P+VVTY  LI G CKA R 
Sbjct: 141 ATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L+  M   G +P  +  +TL D
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLID 227



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 82/150 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA ++   +  +G+ P++ TY+ +I G+C + R+DEA +L E++    + P 
Sbjct: 264 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+++ C+  +++DA  +F  M ++     VVTY+ L+      + +  A  +Y 
Sbjct: 324 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM      P+ ++Y  L  GL + G + EA
Sbjct: 384 EMIAKGCPPDAITYDTLAWGLTRAGKVHEA 413



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 67/124 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KL  Q+  +G+ P ++TYN ++   C  ++L++A +LF  +   +  P  +T+ 
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYN 363

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+ A C   ++D A  ++++M+ KG   + +TY  L  G  ++  +  A ++ E+M   
Sbjct: 364 TLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLT 423

Query: 127 NISP 130
             +P
Sbjct: 424 KRNP 427



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 7/158 (4%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P + TF  + D F K GR++    ++  M+E G       Y  LI    K  N   A+ +
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              M         ++YS +I+ LCK   +EEA       +  +  PD +TY  ++   CK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIE-KMARYAPPDALTYGPIVERLCK 126

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             R  +A+   + M   GI PD  +      YN   SG
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFI------YNFVLSG 158



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           CH   LD A +L+ ++  +G  PD ITY+T+  G     ++ EA +L EK+   +  P
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL    ++  RG++PD   YN ++ G C   +++EA  LFEK+   ++ PN
Sbjct: 19  LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 78

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK  R++ A  +F +M  KG     V+Y+ LIDG+ K +++ +A DV++
Sbjct: 79  VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 138

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +N  PN+V+Y+ LIDGL K G ++ A       +   + P+V TY+ LI G+CK  
Sbjct: 139 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 198

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           R  EA +L + M+  GI P      T+  YN+
Sbjct: 199 RVDEAHKLLEQMVTQGIAP------TVVTYNI 224



 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 116/217 (53%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +LF ++  +G  P  ++YNT+I G+C    L  A  +F+K+      PN
Sbjct: 89  LCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPN 148

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID   K G++  A  +   M++KG   NV TYSCLIDG+ K + +  A  + E
Sbjct: 149 VVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE 208

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I+P +V+Y+IL++ LC+   +E+A   F         P VVTY  L+R  C   
Sbjct: 209 QMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHK 268

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           +   A +LY  M+  G  PD +   TLA + L  +G 
Sbjct: 269 QLDGAHRLYAEMIAKGCPPDAITYDTLA-WGLTRAGK 304



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A  LF ++  + + P+++TYNT+I G C   R++ A +LF+++      P 
Sbjct: 54  LCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT 113

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  LID FCK+  +  A  +F KM+      NVVTY+ LIDG  KS  +++A +V +
Sbjct: 114 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 173

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++PN+ +YS LIDG CK   ++EA       +   + P VVTY IL+   C+A 
Sbjct: 174 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 233

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A +L+  M +    P  +  +TL
Sbjct: 234 KLEDAFKLFRGMAQRRCHPTVVTYNTL 260



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 111/190 (58%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R   PD +TY  I+   C   R+D+A+   E++    +KP++  +  ++   C+E ++++
Sbjct: 3   RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A ++F KM+++    NVVTY+ LI+G  K+  +++A+++++EM      P  VSY+ LID
Sbjct: 63  ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK+  +  A   F   + ++ +P+VVTY  LI G  K+G+   A ++ D M++ G+ P
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182

Query: 201 DGLLLSTLAD 210
           +    S L D
Sbjct: 183 NVATYSCLID 192



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 82/150 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA ++   +  +G+ P++ TY+ +I G+C + R+DEA +L E++    + P 
Sbjct: 159 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 218

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+++ C+  +++DA  +F  M ++     VVTY+ L+      + +  A  +Y 
Sbjct: 219 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 278

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM      P+ ++Y  L  GL + G + EA
Sbjct: 279 EMIAKGCPPDAITYDTLAWGLTRAGKVHEA 308



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 67/124 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KL  Q+  +G+ P ++TYN ++   C  ++L++A +LF  +   +  P  +T+ 
Sbjct: 199 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYN 258

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+ A C   ++D A  ++++M+ KG   + +TY  L  G  ++  +  A ++ E+M   
Sbjct: 259 TLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLT 318

Query: 127 NISP 130
             +P
Sbjct: 319 KRNP 322



 Score = 43.5 bits (101), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           CH   LD A +L+ ++  +G  PD ITY+T+  G     ++ EA +L EK+   +  P
Sbjct: 265 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 122/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  AL +FG++    +EPDI+TY+++I G C  +   E+  L  ++    ++P+
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+I +D FCK+G + +A  + + M+E+G + NVVTY+ L+DGY     M  A  V++
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P+++SY+ILI G CK   ++EA   F       L P+ +T+  LI G C+AG
Sbjct: 444 IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           RP  A +L+  M  +G  PD +  STL
Sbjct: 504 RPYAAKELFKKMGSHGCPPDLITYSTL 530



 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 120/196 (61%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ LF  +   G+ P ++TYN++I G C+  +  +A  LF+++    +KP+ +TF+I
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSI 319

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA CKEG + +A  +F KM++   + ++VTYS LI G  KS   K +  +  EM   N
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRN 379

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++V++SI +D  CK+G++ EA    +  ++  L P+VVTY  L+ GYC   +  EA 
Sbjct: 380 IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEAR 439

Query: 188 QLYDSMLRNGIMPDGL 203
           +++D M+  G  PD L
Sbjct: 440 KVFDIMVNKGCAPDVL 455



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 113/206 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A++    +  RG +P + T+  I+ G C + +   A+   +K+  +  +P  ++
Sbjct: 187 EGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS 246

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++I+ID+ CK   +++A  +F  M   G    VVTY+ LI G   S   K A  +++EM 
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E N+ P++V++SIL+D LCK G++ EAL  F   +   + PD+VTY+ LI G CK+    
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           E+  L + ML   I PD +  S   D
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVD 392



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 118/198 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +   + +RGL P+++TYN+++ GYC  +++DEA ++F+ +      P+ +
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI  +CK  R+D+A  +F +M  KG   N +T++ LI G  ++    +A +++++M
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   P++++YS L+ G CK G ++EAL  F     + L P+ V   IL+ G CKAG+ 
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L+ S+    + PD
Sbjct: 576 EDAKELFSSLSIEELQPD 593



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 114/202 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            AA+    ++ +   EP++++Y+ II   C    ++EAV LF  +  + + P  +T+  L
Sbjct: 226 SAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSL 285

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C  G+   A+++F +MLE   K +VVT+S L+D   K   +  A  V+ +M +  +
Sbjct: 286 IYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+IV+YS LI G+CK  L +E+    +  L  ++ PDVVT++I +  +CK G  +EA  
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           + + M+  G+ P+ +  ++L D
Sbjct: 406 IINLMIERGLRPNVVTYNSLMD 427



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 3/218 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL        + G++   G +P IIT+NT+I G C   R+ EA++  + +     +P  
Sbjct: 150 CHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTV 209

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T T++++  CK G+   A +   KM+E   +  VV+YS +ID   K++ +  A D++  
Sbjct: 210 YTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYH 269

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP +V+Y+ LI G+C  G  ++A   F   L+ ++ PDVVT++IL+   CK G 
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             EA+ ++  M++  + PD +  S+L     +SS  +E
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKE 367



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 94/161 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A K+F  + ++G  PD+++YN +I GYC   R+DEA QLF++++   L PNSIT T
Sbjct: 434 QMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHT 493

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C+ GR   A  +F KM   G   +++TYS L+ G+ K  ++  A  ++E + ++
Sbjct: 494 TLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS 553

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
            + PN V   IL+ G+CK G +E+A   F       L PDV
Sbjct: 554 QLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  H D+ + ++ ++   G+   + T   +I   C L+ +     +  K+  +  KP+
Sbjct: 114 LVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPS 173

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LI+  C EGR+ +A      ++ +G +  V T++ +++G  K     +A    +
Sbjct: 174 IITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMK 233

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E +  P +VSYSI+ID LCK  L+ EA+  F+      + P VVTY  LI G C +G
Sbjct: 234 KMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSG 293

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A  L+  ML   + PD +  S L D
Sbjct: 294 QWKQASILFKEMLEWNMKPDVVTFSILVD 322



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 73  CKEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           CK G     DDA   F++M+   P   +  ++ L+    + ++  S   +Y +M    +S
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++ + +ILI+ LC   L+                P ++T+  LI G C  GR  EAM+ 
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 190 YDSMLRNGIMP 200
            D ++  G  P
Sbjct: 197 LDYIMSRGYQP 207


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 126/211 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL +FG ++ +G +PDI T+N++I G C +N+ +EA+ L++ +    +  N
Sbjct: 94  LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 153

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI AF + G M +A  + + ML +G   + +TY+ LI    ++ N++    ++E
Sbjct: 154 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 213

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PN +S +ILI+GLC+ G ++ AL      +   L PD+VTY  LI G CK G
Sbjct: 214 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 273

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           R  EA+ L+D +   GI PD +  +TL  ++
Sbjct: 274 RAQEALNLFDKLQVEGICPDAITYNTLISWH 304



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 99/176 (56%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PDI TYNT+I G C    L  A +L  ++     +PN IT+TILID FCKEGR+++A
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  +M  KG   N V Y+CLI    K + ++ A +++ +M      P+I +++ LI G
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LCK    EEAL  +   L   ++ + +TY  LI  + + G   EA++L + ML  G
Sbjct: 129 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +L +A +L  ++  +G EP++ITY  +I  +C   RL+EA  + ++++   L  N
Sbjct: 24  LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 83

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LI A CK+ ++ DA  MF  M  KG K ++ T++ LI G  K    + A  +Y+
Sbjct: 84  AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 143

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +  N ++Y+ LI    +RG M+EAL   +  L      D +TY  LI+  C+AG
Sbjct: 144 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 203

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
              + + L++ M+  G+ P+ +  + L +  L  +G+ +H +
Sbjct: 204 NIEKGLALFEDMMSKGLNPNNISCNILIN-GLCRTGNIQHAL 244



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%)

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           + E +  V   P+  T+  LI   CK+G +  A  + ++M  KG + NV+TY+ LID + 
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K   ++ A +V +EM    ++ N V Y+ LI  LCK   +++AL  F         PD+ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           T+  LI G CK  +  EA+ LY  ML  G++ + +  +TL    L+    QE
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 172


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 121/200 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A  LF ++  +G + DIITYNT+I G+C+  R D+  +L   +   ++ PN
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LID+F KEG++ +A  +  +M+++G   N +TY+ LIDG+ K   ++ A  + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+I++++ILI+G CK   +++ L  F       ++ + VTY  L++G+C++G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A +L+  M+   + PD
Sbjct: 453 KLEVAKKLFQEMVSRRVRPD 472



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 119/201 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A +L  ++  RG+ P+ ITYN++I G+C  NRL+EA+Q+ + +      P+
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILI+ +CK  R+DD   +F +M  +G  AN VTY+ L+ G+ +S  ++ A  +++
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+IVSY IL+DGLC  G +E+AL  F     + +  D+  Y I+I G C A 
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           +  +A  L+ S+   G+  D 
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDA 543



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 113/205 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L  ++ +R ++ D + Y+ II G C    LD A  LF ++     K + IT+  LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  GR DD   +   M+++    NVVT+S LID + K   ++ A  + +EM +  I+P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y+ LIDG CK   +EEA+      +     PD++T+ ILI GYCKA R  + ++L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
             M   G++ + +  +TL     QS
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQS 451



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 35/239 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           EC +  AL+L  ++ + G +P +IT NT++ G C   ++ +AV L +++     +PN +T
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230

Query: 65  -----------------------------------FTILIDAFCKEGRMDDATMMFSKML 89
                                              ++I+ID  CK+G +D+A  +F++M 
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            KG KA+++TY+ LI G+  +        +  +M +  ISPN+V++S+LID   K G + 
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EA       +   + P+ +TY  LI G+CK  R  EA+Q+ D M+  G  PD +  + L
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 114/214 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A    G++   G EPD + +NT++ G C   R+ EA++L +++  +  KP  IT  
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C  G++ DA ++  +M+E G + N VTY  +++   KS     A ++  +M E 
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI  + V YSI+IDGLCK G ++ A   F+         D++TY  LI G+C AGR  + 
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +L   M++  I P+ +  S L D  ++    +E
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  L+LF +++ RG+  + +TYNT++ G+C   +L+ A +LF+++   +++P+ +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ IL+D  C  G ++ A  +F K+ +   + ++  Y  +I G   +  +  A+D++  +
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  +  +Y+I+I  LC++  + +A   F    +    PD +TY ILIR +      
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594

Query: 184 TEAMQLYDSMLRNGIMPD 201
           T A +L + M  +G   D
Sbjct: 595 TTAAELIEEMKSSGFPAD 612



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 98/205 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    +  L L  Q+  +G+   I T + +I  +C   +L  A     K+  +  +P+++
Sbjct: 100 KTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTV 159

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  L++  C E R+ +A  +  +M+E G K  ++T + L++G   +  +  A  + + M
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    PN V+Y  +++ +CK G    A+       + ++  D V Y+I+I G CK G  
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  L++ M   G   D +  +TL
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTL 304



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 95/202 (47%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF  +      P +I +N +        + +  + L +++    +  +  T +I+
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  ++  A     K+++ G + + V ++ L++G      +  A ++ + M E   
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P +++ + L++GLC  G + +A+      ++    P+ VTY  ++   CK+G+   AM+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M    I  D +  S + D
Sbjct: 250 LLRKMEERNIKLDAVKYSIIID 271



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 76/160 (47%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           + D+AV LF  +   +  P  I F  L  A  K  + +    +  +M  KG   ++ T S
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+ + + + +  AF    ++ +    P+ V ++ L++GLC    + EAL      ++ 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              P ++T   L+ G C  G+ ++A+ L D M+  G  P+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227



 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 52/113 (46%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF  L  +G++ D   YN +I   C  + L +A  LF K+T     P+ +T+ 
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           ILI A   +     A  +  +M   G  A+V T   +I+     +  KS  D+
Sbjct: 583 ILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDM 635


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 115/198 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  + + PDI++YNT+I G C   +L EAV L  ++      PNS+T T L+D
Sbjct: 163 AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 222

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+GRMD+A  +   M +KG  A+VV Y  LI G+  + N+    ++++EM    IS 
Sbjct: 223 GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 282

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L+ GLC+ G  +EA    +   ++ + PDVVTY  LI G CK GR T AM L 
Sbjct: 283 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 342

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+  G  P  +  + L
Sbjct: 343 NLMVEKGEEPSNVTYNVL 360



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 109/195 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A++L   +  +G + D++ Y T+I G+C+   LD   +LF+++    +  N
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+   C+ G+  +A  + + M E G   +VVTY+ LIDG  K      A D+  
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P+ V+Y++L+ GLCK GL+ +A       ++     DVVTY  L++G C  G
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403

Query: 182 RPTEAMQLYDSMLRN 196
           +  EA++L++SM  N
Sbjct: 404 KVDEALKLFNSMFDN 418



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 122/223 (54%), Gaps = 8/223 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQ 57
           L KE  +  A K+   + ++G + D++TYNT++ G C   ++DEA++LF  +     C  
Sbjct: 364 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC-- 421

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L+PN  TF +LI   CKEGR+  A  +  KM++KG   N+VTY+ L+ G  K+  +K A 
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRG 176
           ++++++ +    PN  +YSILIDG CK  ++  A   F C +  H L P +  Y  L+  
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF-CEMRTHGLNPALFDYNTLMAS 540

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
            CK G   +A  L+  M      PD +  +T+ D  L++   Q
Sbjct: 541 LCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ 583



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 109/206 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +  A++L+ Q+ D G  P+  TY+ +I G+C +  L+ A  LF ++    L P  
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 531

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  L+ + CKEG ++ A  +F +M     + ++++++ +IDG  K+ + +   ++  +
Sbjct: 532 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMK 591

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+ +++S LI+ L K G ++EA  A    + +   PD + Y  L++G    G 
Sbjct: 592 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 651

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            TE + L   M   G + D  ++ST+
Sbjct: 652 TTEIINLLHQMAAKGTVLDRKIVSTI 677



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 6/224 (2%)

Query: 5   ECHLDA-----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           EC  DA        + G +  RG   ++   N ++ G C    + EA+ L  ++    + 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ +++  LI+  CK  ++ +A  +  +M   G   N VT + L+DG  K   M  A ++
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E M +     ++V Y  LI G C  G ++     F   L   +  +VVTY+ L+ G C+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            G+  EA  + ++M  +GI PD +  + L D  L   G   H +
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLID-GLCKDGRATHAM 339



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF ++   GL P +  YNT++   C    L++A  LF+++     +P+ I+F  
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G       +  KM+E G + + +T+S LI+   K   +  A    E M  + 
Sbjct: 572 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+ + Y  L+ GL  +G   E +   H       + D    + ++   C + +  + M
Sbjct: 632 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVM 691

Query: 188 QLYDSMLR 195
           +L  +  +
Sbjct: 692 ELLPTFFQ 699



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           ++  EAV LF       L P+  T   L+DA  +      A  ++ +M       +  + 
Sbjct: 53  SQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSL 112

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           S LI+ +  +Q  +  F V   + +   + N+   +I++ GLC+ G + EA+        
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             + PD+V+Y  LI G CKA +  EA+ L   M   G  P+ +  +TL D
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 222



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 61/122 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ A  LF ++ +   EPDII++NT+I G           +L  K+  + L+P+
Sbjct: 541 LCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPD 600

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF+ LI+   K G +D+A     +M+  G   + + Y  L+ G     +     ++  
Sbjct: 601 ALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLH 660

Query: 122 EM 123
           +M
Sbjct: 661 QM 662


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 123/204 (60%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITFT 66
           LD A++L  ++T+RG  P+ ITYN I+ G CS  +LD A+QLF+++       P+  T++
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++D+  K G++DDA  +   M+ KG   NVVTYS L+ G  K+  +  A  + + M  +
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPNIV+Y+ +IDG CK G ++EA +     +D    P+VVTY +L+  +CK G+  +A
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M+  G +P+    ++L D
Sbjct: 345 IGLVEVMVEKGYVPNLFTYNSLLD 368



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 116/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  L  ++T  G  P+I+TYNTII G+C L R+DEA  L E++     +PN
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+L+DAFCK G+ +DA  +   M+EKG   N+ TY+ L+D + K   ++ A  +  
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    PN+VSY+ +I GLCK   + E +      L N+ +PD+VT+  +I   CK  
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A +L++ +  +G  P+
Sbjct: 445 RVDIAYELFNLIQESGCTPN 464



 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 1/211 (0%)

Query: 2   LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K    D A  L  ++T + G  PDIITYNT+I G C   R+D A +LF ++    L P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T++I+I + CK   MD+A  +   ML+ G     +TY  LIDG+ K+ N+  A ++ 
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 594

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + +      P++V++SI ID L KRG + +A       L   L+PD VTY  L++G+C A
Sbjct: 595 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 654

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            R  +A+ L++ M + G  PD    +TL  +
Sbjct: 655 SRTEDAVDLFEVMRQCGCEPDNATYTTLVGH 685



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D A +L   +  +G  P+++TY++++ G C   +LDEA  L +++T     PN
Sbjct: 230 LVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID  CK GR+D+A  +  +M++ G + NVVTY+ L+D + K    + A  + E
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    PN+ +Y+ L+D  CK+  +E A       +    +P+VV+Y  +I G CKA 
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  E + L + ML N  +PD +  +T+ D
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIID 438



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 117/202 (57%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           LD+AL+LF ++ + G   PD+ TY+TI+       ++D+A +L E +      PN +T++
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   CK G++D+AT +  +M   G   N+VTY+ +IDG+ K   +  A+ + EEM + 
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+Y++L+D  CK G  E+A+      ++   +P++ TY  L+  +CK      A
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            QL  SM++ G +P+ +  +T+
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTV 401



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 1/211 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  K+  ++ A +L   +  +G  P++++YNT+I G C   ++ E V L E++      P
Sbjct: 369 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 428

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  +IDA CK  R+D A  +F+ + E G   N+VTY+ L+ G  KS+    A  + 
Sbjct: 429 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 488

Query: 121 EEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EM  +   SP+I++Y+ +IDGLCK   ++ A   F   L + L PD VTY+I+I   CK
Sbjct: 489 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                EA  + + ML+NG  P  +   TL D
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLID 579



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 120/208 (57%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A++L  ++ D G  P++ +YNT++ G+C  NR++ A+ L E++      P+
Sbjct: 54  LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPD 113

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T +I+  CK  ++D+A  +  KM+++G + NV+TY  L+DG+ +  ++  A ++  
Sbjct: 114 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 173

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKA 180
           +M E    PN ++Y+ ++ GLC    ++ AL  F          PDV TY+ ++    K+
Sbjct: 174 KMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKS 233

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G+  +A +L ++M+  G  P+ +  S+L
Sbjct: 234 GKVDDACRLVEAMVSKGCSPNVVTYSSL 261



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 1/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  L  ++ D G +P+++TY  ++  +C   + ++A+ L E +      PN  T+ 
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 364

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D FCK+  ++ A  + S M++KG   NVV+Y+ +I G  K+  +     + E+M  N
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  P+IV+++ +ID +CK   ++ A   F+   ++   P++VTY  L+ G CK+ R  +A
Sbjct: 425 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484

Query: 187 MQLYDSMLR-NGIMPDGLLLSTLAD 210
             L   M R  G  PD +  +T+ D
Sbjct: 485 EYLLREMTRKQGCSPDIITYNTVID 509



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 1/199 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD +TYNT+I G    +RLD+A++L E++      PN  ++  ++  FCK  R+++A  +
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ +G   +VV+Y+ +I+G  K   +  A  V ++M +    PN+++Y  L+DG C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG-IMPDGL 203
            G ++ A+       +    P+ +TY  ++ G C   +   A+QL+  M  +G   PD  
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 204 LLSTLADYNLQSSGSQEHC 222
             ST+ D  ++S    + C
Sbjct: 222 TYSTIVDSLVKSGKVDDAC 240



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +   +   G +P  ITY T+I G+C    LD+A+++ + L      P+
Sbjct: 546 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 605

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+I ID   K GR+  A  +   ML  G   + VTY+ L+ G+  +   + A D++E
Sbjct: 606 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
            M +    P+  +Y+ L+  L  +
Sbjct: 666 VMRQCGCEPDNATYTTLVGHLVDK 689



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K   L  A +L   +   GL PD +TYNT++ G+C  +R ++AV LFE +     +P
Sbjct: 615 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSK-MLEKGPKAN 96
           ++ T+T L+     +    D     SK M++ G K N
Sbjct: 675 DNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 122/200 (61%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  Q+  RG  PD+I+Y+T+I GYC +  L   ++L E++    LKPN  T+  +I 
Sbjct: 272 AHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVIL 331

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G++ +A  +  +M+ +G   + V Y+ LIDG+ K  N+ SA+ +++EM +  ISP
Sbjct: 332 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 391

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ +I GLC+ G + EA   FH  +   L PD VTY  LI GYCK G+  EA  L+
Sbjct: 392 DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLH 451

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + ML+ G+ P+ +  + LAD
Sbjct: 452 NQMLQMGLTPNIVTYTALAD 471



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 120/210 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +  A ++  ++   G+ PD + Y T+I G+C L  +  A +LF+++   ++ P
Sbjct: 332 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 391

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+T +I   C+ GR+ +A  +F +M+ K  + + VTY+ LIDGY K   MK AF ++
Sbjct: 392 DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLH 451

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +  ++PNIV+Y+ L DGLCK G ++ A    H      L  ++ TY  L+ G CKA
Sbjct: 452 NQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKA 511

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A++L   M   G  PD +  +TL D
Sbjct: 512 GNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 541



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 111/211 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++D A+KL   +   G  PD +TY T++  YC    +  A +L  ++   +L+P 
Sbjct: 508 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L++ FC  G ++D   +   MLEKG   N  TY+ LI  Y    NM++  ++Y 
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 627

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            MC   + P+  +Y+ILI G CK   M+EA +     +       V +Y  LI+G+ K  
Sbjct: 628 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 687

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           +  EA +L++ M R G++ D  + +  AD N
Sbjct: 688 KFLEARELFEQMRREGLVADREIYNIFADIN 718



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF ++  + LEPD +TY  +I GYC   ++ EA  L  ++  + L PN +T+T L D
Sbjct: 412 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G +D A  +  +M  KG + N+ TY+ L++G  K+ N+  A  + ++M      P
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+D  CK   M  A       LD  L P VVT+ +L+ G+C +G   +  +L 
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 591

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  GIMP+    ++L
Sbjct: 592 KWMLEKGIMPNATTYNSL 609



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  L  Q+   GL P+I+TY  +  G C    +D A +L  ++    L+ N  
Sbjct: 440 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 499

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++  CK G +D A  +   M   G   + VTY+ L+D Y KS+ M  A ++  +M
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P +V++++L++G C  G++E+        L+  ++P+  TY  LI+ YC     
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619

Query: 184 TEAMQLYDSMLRNGIMPDG 202
               ++Y  M   G++PDG
Sbjct: 620 RATTEIYRGMCAKGVVPDG 638



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 104/191 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++  +GLE +I TYN+++ G C    +D+AV+L + +      P+++T+T 
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA+CK   M  A  +  +ML++  +  VVT++ L++G+  S  ++    + + M E  
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN  +Y+ LI   C R  M      +       ++PD  TY ILI+G+CKA    EA 
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658

Query: 188 QLYDSMLRNGI 198
            L+  M+  G 
Sbjct: 659 FLHRDMVGKGF 669



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALK+F +  + G+  +  +YN I    C L R+ EA QL  ++      P+ I+++ +I+
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ G +     +  +M  KG K N  TY+ +I    K+  +  A  V  EM    I+P
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V Y+ LIDG CK G +  A   F       + PD +TY  +I G C+ GR  EA +L+
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+   + PD +  + L D
Sbjct: 417 HEMVCKRLEPDEVTYTALID 436



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 1/202 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLK 59
           +L++   LD A KLF ++ + GL   + + N  I      L+ +  A+++F +   V + 
Sbjct: 191 VLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVC 250

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            N+ ++ I+  + C+ GR+ +A  +  +M  +G   +V++YS +I+GY +   ++    +
Sbjct: 251 WNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKL 310

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EEM    + PN  +Y+ +I  LCK G + EA       +   + PD V Y  LI G+CK
Sbjct: 311 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 370

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G  + A +L+D M +  I PD
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPD 392



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 92/191 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  Q+ DR L+P ++T+N ++ G+C    L++  +L + +    + PN+ T+  LI 
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C    M   T ++  M  KG   +  TY+ LI G+ K++NMK A+ ++ +M     + 
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + SY+ LI G  KR    EA   F       L+ D   Y I        G+    ++L 
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 731

Query: 191 DSMLRNGIMPD 201
           D  +   ++ D
Sbjct: 732 DEAIEKCLVGD 742



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 79/162 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   KL   + ++G+ P+  TYN++I  YC  N +    +++  +    + P+  T+ I
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK   M +A  +   M+ KG    V +Y+ LI G++K +    A +++E+M    
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           +  +   Y+I  D     G ME  L     A++  L+ D+ T
Sbjct: 704 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDVYEE 122
            F I      + G +D+A  +F KML  G   +V + +  I    +    +K A  V+ E
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E  +  N  SY+I+   LC+ G + EA            +PDV++Y+ +I GYC+ G 
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303

Query: 183 PTEAMQLYDSMLRNGIMPD 201
               ++L + M   G+ P+
Sbjct: 304 LQRVLKLIEEMQIKGLKPN 322


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE   + A+K+ G + D+GL PD+  YNT+I G+C   +++E      ++    LKPN
Sbjct: 487 LVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I  +C+ G M  A   F +ML+ G   N V  + LIDGY K  N   AF  + 
Sbjct: 547 VYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFR 606

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P++ ++S+LI GL K G ++EA+  F   LD  L+PDV TY  LI   CK G
Sbjct: 607 CMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG 666

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A +L+D M + GI P+
Sbjct: 667 DLKAAFELHDDMCKKGINPN 686



 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 125/213 (58%), Gaps = 1/213 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +LF  + ++GL  + +TY+TII GYC    L EA QLF  +  V + P+
Sbjct: 697 LCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPD 756

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S  +  LID  CK G  + A  +F  M+E+G  A+   ++ LIDG+FK   +  A+ + E
Sbjct: 757 SFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVE 815

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +N+I+PN V+Y+ILI+  C  G ++EA   F      +++P+V+TY  L+ GY + G
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           R +E   L+D M+  GI PD L  S + D +L+
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLK 908



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A +LF ++   GL+P+I+ Y TI+ G     R +EA+++   +    L P+ 
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  +I  FCK G+M++      +M+ KG K NV TY   I GY ++  M++A   + E
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M ++ I+PN V  + LIDG CK G   +A   F C LD  +LPDV T+++LI G  K G+
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EAM ++  +L  G++PD    ++L
Sbjct: 633 LQEAMGVFSELLDKGLVPDVFTYTSL 658



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 116/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            + AA + F ++ D G+ P+ +    +I GYC      +A   F  +    + P+  T +
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI    K G++ +A  +FS++L+KG   +V TY+ LI    K  ++K+AF+++++MC+ 
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PNIV+Y+ LI+GLCK G + +A   F    +  L  + VTY+ +I GYCK+   TEA
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            QL+  M   G+ PD  +   L D
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALID 765



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 113/241 (46%), Gaps = 34/241 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ +F +L D+GL PD+ TY ++I   C    L  A +L + +    + PN
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK G +  A  +F  + EKG   N VTYS +I GY KS N+  AF ++ 
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFH 746

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-------------------------- 155
            M    + P+   Y  LIDG CK G  E+AL  F                          
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGK 806

Query: 156 --------HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                      +DNH+ P+ VTY ILI  +C  G   EA QL+  M +  +MP+ L  ++
Sbjct: 807 LIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTS 866

Query: 208 L 208
           L
Sbjct: 867 L 867



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 35/215 (16%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL+PD + Y  +I G+   + +  A Q+ E++   ++K N+ T+  LI   CK G ++ A
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF------------------------ 117
             +FS+M   G K ++ TY+CLI+GY+K QNM+ A+                        
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451

Query: 118 -----------DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
                      ++++EM    + PNIV Y+ ++ GL K G  EEA+       D  L PD
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           V  Y  +I G+CKAG+  E       M+  G+ P+
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGY------------------------------ 37
           L+ A  LF ++T  G++PDI TYN +I GY                              
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447

Query: 38  -----CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
                C    L  A +LF+++    LKPN + +T ++    KEGR ++A  +   M ++G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              +V  Y+ +I G+ K+  M+       EM    + PN+ +Y   I G C+ G M+ A 
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +F   LD+ + P+ V    LI GYCK G  T+A   +  ML  G++PD
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD 616



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 103/195 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +   A   F  + D+G+ PD+ T++ +I G     +L EA+ +F +L    L P+  
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   CKEG +  A  +   M +KG   N+VTY+ LI+G  K   +  A ++++ +
Sbjct: 654 TYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGI 713

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++ N V+YS +I G CK   + EA   FH      + PD   Y  LI G CKAG  
Sbjct: 714 PEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNT 773

Query: 184 TEAMQLYDSMLRNGI 198
            +A+ L+  M+  GI
Sbjct: 774 EKALSLFLGMVEEGI 788



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 91/172 (52%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + ++G  P+++TY+ +I G C    +DEA++L   +    L P++  +  LID FC++ R
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
             +   M  +M   G K + V Y+ LI+G+ K  ++  AF V EEM    I  N  +Y  
Sbjct: 318 STEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA 377

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           LI GLCK G +E+A   F       + PD+ TY  LI GY K     +A +L
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYEL 429



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 11/199 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + AL LF  + + G+      +N +I G+  L +L EA QL E +    + PN +
Sbjct: 769 KAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHV 827

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+  C  G + +A  +F +M ++    NV+TY+ L+ GY +       F +++EM
Sbjct: 828 TYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEM 887

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT-----YAILIRGYC 178
               I P+ +++S+++D   K G   +AL      L + +L + V      Y ILI   C
Sbjct: 888 VARGIKPDDLAWSVMVDAHLKEGNWIKAL-----KLVDDMLSEGVNVCKNLYTILIDALC 942

Query: 179 KAGRPTEAMQLYDSMLRNG 197
           K    +E +++ D + + G
Sbjct: 943 KHNNLSEVLKVLDEVEKQG 961



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 96/186 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   + D  + P+ +TY  +I  +C++  + EA QLF ++    + PN +T+T L+ 
Sbjct: 810 AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + + GR  +   +F +M+ +G K + + +S ++D + K  N   A  + ++M    ++ 
Sbjct: 870 GYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV 929

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
               Y+ILID LCK   + E L              + T   L+  + +AGR  EA+++ 
Sbjct: 930 CKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVL 989

Query: 191 DSMLRN 196
           +SM+R+
Sbjct: 990 ESMVRS 995



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 34/208 (16%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF----------------- 85
           LD  ++ ++++       + + F ILID + K+G +++A  +F                 
Sbjct: 144 LDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNS 203

Query: 86  -SKMLEKGPKA----------------NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            SK L KG +                 +V TY+ LI+ Y +   ++    V  +M E   
Sbjct: 204 LSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGC 263

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+YS++I GLC+ G ++EAL       +  LLPD   YA LI G+C+  R TE   
Sbjct: 264 IPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKS 323

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           + D M   G+ PD +  + L +  ++ S
Sbjct: 324 MLDEMYTMGLKPDHVAYTALINGFVKQS 351



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 74/146 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A +LF ++  R + P+++TY +++ GY  + R  E   LF+++    +KP+ + ++
Sbjct: 841 NIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWS 900

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +++DA  KEG    A  +   ML +G       Y+ LID   K  N+     V +E+ + 
Sbjct: 901 VMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQ 960

Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL 152
               ++ +   L+    + G  +EAL
Sbjct: 961 GSKLSLATCGTLVCCFHRAGRTDEAL 986


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE RMD+A  +F +ML+ G   N VT++ LIDG+ K+  +  A D+Y +M
Sbjct: 208 TYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP++V+Y+ LI GLCK+G +++A Y         L PD +TY  LI G CK G  
Sbjct: 268 LNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L + M++  I  D ++ + L
Sbjct: 328 ETAFELRERMIKESIRLDDVVYTAL 352



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +R+DEA  LF ++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +G   +VVTY+ LI G  K  ++K A  + +E
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +   +  D V Y  LI G C+ GR
Sbjct: 302 MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   MLR G+ PD
Sbjct: 362 AVDAEKMLREMLRVGLKPD 380



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LFG++ D GL P+ +T+ T+I G+C   RLD A+ ++ ++      P+
Sbjct: 216 LCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF++ E
Sbjct: 276 VVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRE 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + +I  + V Y+ LI GLC+ G   +A       L   L PD  TY +++  +CK G
Sbjct: 336 RMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +A +L   M RNG +P
Sbjct: 396 DVKKASELLREMQRNGRVP 414



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + K G +D+   + + M   G + +V TYS LI+G  K   M  A  ++ 
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFG 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N + PN V+++ LIDG CK G ++ A+  +   L+    PDVVTY  LI G CK G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M R G+ PD +  +TL D
Sbjct: 291 DLKQARYLLDEMSRKGLKPDKITYTTLID 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 93/166 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ ++ Q+ ++G  PD++TYNT+I G C    L +A  L ++++   LKP+ I
Sbjct: 253 KNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKI 312

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG ++ A  +  +M+++  + + V Y+ LI G  +      A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREM 372

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
               + P+  +Y+++++  CK+G +++A         N  +P VVT
Sbjct: 373 LRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 74/133 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +L E++    ++ +
Sbjct: 286 LCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +++ + K  ++K A ++  
Sbjct: 346 DVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLR 405

Query: 122 EMCENNISPNIVS 134
           EM  N   P +V+
Sbjct: 406 EMQRNGRVPCVVT 418



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   F    +   +    T   +++   K +  K  +  Y+E+ 
Sbjct: 69  FSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHL------ 163
           E     ++  ++IL+   CK G M  A               + +F+  ++ ++      
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  R  EA  L+  ML NG++P+G+  +TL 
Sbjct: 189 EGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 126/211 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL +FG ++ +G +PDI T+N++I G C +N+ +EA+ L++ +    +  N
Sbjct: 487 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 546

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI AF + G M +A  + + ML +G   + +TY+ LI    ++ N++    ++E
Sbjct: 547 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 606

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PN +S +ILI+GLC+ G ++ AL      +   L PD+VTY  LI G CK G
Sbjct: 607 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 666

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           R  EA+ L+D +   GI PD +  +TL  ++
Sbjct: 667 RAQEALNLFDKLQVEGICPDAITYNTLISWH 697



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 99/176 (56%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PDI TYNT+I G C    L  A +L  ++     +PN IT+TILID FCKEGR+++A
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  +M  KG   N V Y+CLI    K + ++ A +++ +M      P+I +++ LI G
Sbjct: 462 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 521

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LCK    EEAL  +   L   ++ + +TY  LI  + + G   EA++L + ML  G
Sbjct: 522 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +L +A +L  ++  +G EP++ITY  +I  +C   RL+EA  + ++++   L  N
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LI A CK+ ++ DA  MF  M  KG K ++ T++ LI G  K    + A  +Y+
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +  N ++Y+ LI    +RG M+EAL   +  L      D +TY  LI+  C+AG
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
              + + L++ M+  G+ P+ +  + L +  L  +G+ +H +
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILIN-GLCRTGNIQHAL 637



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 1/197 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEA-VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           P+++ +NT+I GY S  RLDEA   + E +  V   P+  T+  LI   CK+G +  A  
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           + ++M  KG + NV+TY+ LID + K   ++ A +V +EM    ++ N V Y+ LI  LC
Sbjct: 429 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 488

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   +++AL  F         PD+ T+  LI G CK  +  EA+ LY  ML  G++ + +
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548

Query: 204 LLSTLADYNLQSSGSQE 220
             +TL    L+    QE
Sbjct: 549 TYNTLIHAFLRRGAMQE 565



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 5/178 (2%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PD+ T+N  I G C + R+ EA +L +++      PNS T+ +L+   C+ G++D+A
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-YEEMCENNISPNIVSYSILID 140
            M+ +K+    P  NVV ++ LI+GY     +  A  V +E M      P+I +Y+ LI 
Sbjct: 360 RMLLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           GLCK+G +  A    +        P+V+TY ILI  +CK GR  EA  + D M   G+
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGL 473



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  +G+ P + T+  ++   C +N +D A  L + +T     PN+I +  LI A  
Sbjct: 222 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+++   +  +ML  G   +V T++  I G  K   +  A  + + M     +PN  
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ-LYDS 192
           +Y +L+ GLC+ G ++EA       L+    P+VV +  LI GY   GR  EA   +++S
Sbjct: 342 TYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHES 397

Query: 193 MLRNGIMPDGLLLSTL 208
           ML  G  PD    +TL
Sbjct: 398 MLSVGCGPDIFTYNTL 413



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           +Y+ ++D        K   +V+ EM    ISP + ++ +++  LC    ++ A       
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +  +P+ + Y  LI    K GR  E ++L + ML  G +PD
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPD 304


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ A+ +  Q+ D G  PD +TYNT+I G+    RL EAV L  ++      P+
Sbjct: 288 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L    C+ GR D+A  +   M  +G   N +TYS ++DG  K+  +  A   +E
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407

Query: 122 EMCENNI-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +M  + + +P++++YS LIDGLCK G ++EA       +    +PDVVT++ILI G C A
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           GR    ++L+  M   G +PD +  +TL D   ++S   E
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDE 507



 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 124/210 (59%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F +  +RG  P+++TY+T+I G   + ++DEA+QL  K+  +  + N
Sbjct: 218 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T++ ++D   K GRM+DA ++  +M + G   + VTY+ LIDG+FK Q ++ A  +  
Sbjct: 278 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++V+Y+ L  GLC+ G  +EA+            P+ +TY+ ++ G CKAG
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397

Query: 182 RPTEAMQLYDSMLRNGIM-PDGLLLSTLAD 210
           R TEA+  ++ M R+ ++ P  +  S L D
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALID 427



 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 121/211 (57%), Gaps = 2/211 (0%)

Query: 2   LIKECHLDAALKLFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           L KE  ++AA ++  ++   + GL PD+IT+N+++ G C   R+ +A  +F++      +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN +T++ LID   K  +MD+A  + +KM+E G +AN VTYS ++DG  K   M+ A  V
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M +    P+ V+Y+ LIDG  KR  + EA+      L+    P VVTY  L  G C+
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +GR  EA+++ D M   G  P+ +  S++ D
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVD 391



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K   L  A+ L  ++ + G  P ++TY T+  G C   R DEAV++ + +      PN
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVY 120
           +IT++ ++D  CK GR+ +A   F KM      A +V+ YS LIDG  K+  +  A++  
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M      P++V++SILI+GLC  G ++  L  F    +   +PD+VTYA L+   C+A
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            R  EA  L+  M  +G+ PD
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPD 523



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ LF Q+ D+ + PD++TY  +I G     R+ EA  LFE+       P 
Sbjct: 5   LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 64

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+  +ID  CK GR+++A  ++  M +  G +  VVTYS LIDG  +   +     + 
Sbjct: 65  VVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLL 124

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM     +PN V+Y+ L++ L  +G  +EA         N   P+++T+ ++I+G CK 
Sbjct: 125 EEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKE 184

Query: 181 GRPTEAMQLYDS--MLRNGIMPDGLLLSTLAD 210
           G    A ++ D   M+ +G+ PD +  +++ D
Sbjct: 185 GEIEAAFRVVDEMFMIESGLSPDVITFNSVLD 216



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKP 60
           L K+  +  A  LF +   +G  P ++TYNT+I G C   R++ A+ L++ +      +P
Sbjct: 40  LGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRP 99

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +T++ LID  C++  +D    +  +M  +G   N VTY+ L++        K AF + 
Sbjct: 100 TVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLL 159

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYC 178
           E+M  N   P ++++ ++I GLCK G +E A         +++ L PDV+T+  ++ G C
Sbjct: 160 EQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLC 219

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K  R  +A  ++   L  G  P+ +  STL D
Sbjct: 220 KEQRILDAHNVFKRALERGCRPNVVTYSTLID 251



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 1/191 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KP 60
           L +    D A+++   +  RG  P+ ITY++I+ G C   R+ EA+  FEK+   ++  P
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I ++ LID  CK G++D+A     +M+  G   +VVT+S LI+G   +  + +  +++
Sbjct: 418 HVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 477

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M E    P++V+Y+ L+D LC+   ++EA   F     + L PD  T   +I G  + 
Sbjct: 478 RGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEV 537

Query: 181 GRPTEAMQLYD 191
            R  +A ++ D
Sbjct: 538 NRDEDAKRIQD 548



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 1/154 (0%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK  ++D A  +F +M++K    +VVTY  LIDG  K + +K A+D++EE     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             P +V+Y+ +IDGLCK G +E AL  +   A+     P VVTY+ LI G C+     + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +L + M   G  P+ +  +TL +  L    S+E
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKE 154



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 5/181 (2%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +I G C   ++D+A+ LF+++    + P+ +T+  LID   K+ R+ +A  +F +   KG
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLCKRGLMEEA 151
               VVTY+ +IDG  K   +++A  +Y++M  +    P +V+YS LIDGLC+   +++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD----GLLLST 207
                        P+ VTY  L+      GR  EA  L + M  NG  P+    GL++  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 208 L 208
           L
Sbjct: 181 L 181



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +   ++   G  PD++T++ +I G C   R+D  ++LF  +      P+
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  C+  R+D+A  +F +M   G   +  T   +I G  +    + A  + +
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQD 548

Query: 122 E 122
           E
Sbjct: 549 E 549


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 125/207 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +++ A  L+ ++  R +  +I+TY+ +I G+C + +L +A+ LF K+T   + P+  
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+DAFCKEGR+ +A    + M+++G K ++VTY+ L+DGY     +  A  +   M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++  + SY+I+I+G CK  ++++A+  F       + P+V+TY  LI G CK+GR 
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A++L D M   G  PD +  S++ D
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILD 428



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 109/200 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +  ++   G EPD IT NT I G+C   ++ +A+   +KL  +    + +++  LI+
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 183

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  +  ++  K  + +VV YS +ID   K +N+  AFD+Y EM    IS 
Sbjct: 184 GLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISS 243

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+YS LI G C  G +++A+  F+     ++ PDV T+ IL+  +CK GR  EA    
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL 303

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M++ GI PD +  ++L D
Sbjct: 304 AMMMKQGIKPDIVTYNSLMD 323



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 112/196 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +   ++ RG+   + +YN +I G+C +  +D+A++LF+++   Q+ PN IT+  
Sbjct: 331 VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNS 390

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+  A  +   M ++G + +++TYS ++D   K+  +  A  +  ++ +  
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+ +Y+ILIDGLCK G +E+A   F   L       V TY ++I+G+C  G   EA+
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510

Query: 188 QLYDSMLRNGIMPDGL 203
            L   M  N  +PD +
Sbjct: 511 SLLSKMKDNSCIPDAI 526



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 109/194 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A      +  +G++PDI+TYN+++ GYC +N ++ A  +   ++   +     
Sbjct: 292 KEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ I+I+ FCK   +D A  +F +M  K    NV+TY+ LIDG  KS  +  A ++ + M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P+I++YS ++D LCK  L+++A+       D  + P++ TY ILI G CK GR 
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471

Query: 184 TEAMQLYDSMLRNG 197
            +A  +++ +L  G
Sbjct: 472 EDARNIFEDLLVKG 485



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 109/192 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KLF ++  + + P++ITYN++I G C   R+  A++L + +     +P+ IT++ 
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK   +D A  +  K+ ++G + N+ TY+ LIDG  K   ++ A +++E++    
Sbjct: 426 ILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKG 485

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +  + +Y+++I G C  GL +EAL       DN  +PD +TY I+I          +A 
Sbjct: 486 YNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAE 545

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 546 KLLREMITRGLL 557



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 112/211 (53%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L   G   D ++Y T+I G C +     A++L  ++    ++ + + ++
Sbjct: 155 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYS 214

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK+  ++DA  ++S+M+ +   +N+VTYS LI G+     +K A  ++ +M   
Sbjct: 215 TIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSE 274

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI+P++ +++IL+D  CK G ++EA       +   + PD+VTY  L+ GYC       A
Sbjct: 275 NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA 334

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             + ++M   G+       +T+  YN+  +G
Sbjct: 335 KSILNTMSHRGVT------ATVRSYNIVING 359



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    L LF ++  RG++P+ + +N +I  +C L  +  A  +  K+  +  +P+
Sbjct: 80  LVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPD 139

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT    I  FC +G++  A     K++  G   + V+Y  LI+G  K    ++A ++  
Sbjct: 140 TITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    +  ++V YS +ID +CK   + +A   +   +   +  ++VTY+ LI G+C  G
Sbjct: 200 RVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVG 259

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L++ M    I PD    + L D
Sbjct: 260 KLKDAIGLFNKMTSENINPDVYTFNILVD 288



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 80/138 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL+L   + DRG +PDIITY++I+   C  + +D+A+ L  KL    ++PN
Sbjct: 395 LCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPN 454

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILID  CK GR++DA  +F  +L KG    V TY+ +I G+        A  +  
Sbjct: 455 MYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLS 514

Query: 122 EMCENNISPNIVSYSILI 139
           +M +N+  P+ ++Y I+I
Sbjct: 515 KMKDNSCIPDAITYEIII 532



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 2/199 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF  L  +   P  + +  I+            + LF+K+    +KPN + F ILI+
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+ G +  A  + +K+L+ G + + +T +  I G+     +  A + ++++       
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKAGRPTEAMQL 189
           + VSY  LI+GLCK G    AL      +D  L+  DVV Y+ +I   CK     +A  L
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLR-RVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           Y  M+   I  + +  S L
Sbjct: 233 YSEMVSRRISSNIVTYSAL 251



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 47/248 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  +L D+G+ P++ TY  +I G C   RL++A  +FE L        
Sbjct: 430 LCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT 489

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T++I  FC  G  D+A  + SKM +     + +TY  +I   F       A  +  
Sbjct: 490 VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLR 549

Query: 122 EMCENNISPNIVSY------------------SILIDGLCKRG----LMEEALYAFHCAL 159
           EM    +  + + Y                  S+      + G    L+ E +Y   C L
Sbjct: 550 EMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYC-DCVL 608

Query: 160 DNHLL-------PDVVTYA-----------------ILIRGYCKAGRPTEAMQLYDSMLR 195
               +       P V+ Y+                 ++I+G+C  G   E++ L   M  
Sbjct: 609 TKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEV 668

Query: 196 NGIMPDGL 203
           NG +PD +
Sbjct: 669 NGCIPDAV 676



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 65/131 (49%)

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           DA  +F+ +L + P    + +  ++    KS++  +   ++++M    I PN V+++ILI
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           +  C+ GL+  A       L     PD +T    I+G+C  G+  +A+  +D ++  G  
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 200 PDGLLLSTLAD 210
            D +   TL +
Sbjct: 173 LDQVSYGTLIN 183



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 45/214 (21%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +F  L  +G    + TY  +I G+CS    DEA+ L  K+      P+
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML-------------------------------- 89
           +IT+ I+I +   +   D A  +  +M+                                
Sbjct: 525 AITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQ 584

Query: 90  -----EKGPKANVVTYSCLIDGYFKSQNMKS------AFDVYE--EMCENNISPNIVSYS 136
                E G  A ++      D      NM+       +  +Y   +  +     ++ +Y+
Sbjct: 585 CTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYT 644

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
           ++I G C  GL +E+L        N  +PD VTY
Sbjct: 645 VMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 126/207 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A  L+ ++   G+ P+++TY  +I G+C + +L+EA+ LF+K+    + PN  
Sbjct: 184 KDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVY 243

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+DAFCKEG++++A  + + M+EK  K++VV YS L++GY     +  A  +++ M
Sbjct: 244 TFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTM 303

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +S ++ SY+I+I+  CK  +++EA+  F       + PDVVTY  LI G CK+GR 
Sbjct: 304 AERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRL 363

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + AM+L D M   G  P+ +    + D
Sbjct: 364 SYAMELVDEMDDRGEPPNIITYCPIVD 390



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 5/174 (2%)

Query: 21  RGLEPDIITYNTIICGYCSL-NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           RG + D  +Y T+I G C +      A+QL  +      +P+ + +T +ID  CK+  ++
Sbjct: 134 RGFDVDHYSYGTLINGLCKVGGDTRAALQLLRQ----AFEPDVVMYTTVIDNMCKDTFVN 189

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           DA  ++ +M+  G   NVVTY+ LIDG+     ++ A  ++++M   NI+PN+ +++ L+
Sbjct: 190 DAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLV 249

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           D  CK G +EEA    +  ++  L  DVV Y+ L+ GYC      +A  ++ +M
Sbjct: 250 DAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTM 303



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 83/141 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A  +   + ++ L+ D++ Y++++ GYC +N + +A  +F+ +   +L  +  
Sbjct: 254 KEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVR 313

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ I+I+ FCK   +D+A  +F +M  K    +VVTY  LIDG  KS  +  A ++ +EM
Sbjct: 314 SYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEM 373

Query: 124 CENNISPNIVSYSILIDGLCK 144
            +    PNI++Y  ++D LCK
Sbjct: 374 DDRGEPPNIITYCPIVDVLCK 394



 Score = 42.7 bits (99), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           SY  LI+GLCK G    A       L     PDVV Y  +I   CK     +A  LY  M
Sbjct: 142 SYGTLINGLCKVGGDTRAALQL---LRQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEM 198

Query: 194 LRNGIMPDGLLLSTLAD 210
           + +GI P+ +  + L D
Sbjct: 199 VASGISPNVVTYTALID 215


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 126/211 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL +FG ++ +G +PDI T+N++I G C +N+ +EA+ L++ +    +  N
Sbjct: 469 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 528

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI AF + G M +A  + + ML +G   + +TY+ LI    ++ N++    ++E
Sbjct: 529 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 588

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PN +S +ILI+GLC+ G ++ AL      +   L PD+VTY  LI G CK G
Sbjct: 589 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 648

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           R  EA+ L+D +   GI PD +  +TL  ++
Sbjct: 649 RAQEALNLFDKLQVEGICPDAITYNTLISWH 679



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 99/176 (56%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PDI TYNT+I G C    L  A +L  ++     +PN IT+TILID FCKEGR+++A
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  +M  KG   N V Y+CLI    K + ++ A +++ +M      P+I +++ LI G
Sbjct: 444 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 503

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LCK    EEAL  +   L   ++ + +TY  LI  + + G   EA++L + ML  G
Sbjct: 504 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +L +A +L  ++  +G EP++ITY  +I  +C   RL+EA  + ++++   L  N
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LI A CK+ ++ DA  MF  M  KG K ++ T++ LI G  K    + A  +Y+
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +  N ++Y+ LI    +RG M+EAL   +  L      D +TY  LI+  C+AG
Sbjct: 519 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
              + + L++ M+  G+ P+ +  + L +  L  +G+ +H +
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILIN-GLCRTGNIQHAL 619



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 1/197 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEA-VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           P+++ +NT+I GY S  RLDEA   + E +  V   P+  T+  LI   CK+G +  A  
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           + ++M  KG + NV+TY+ LID + K   ++ A +V +EM    ++ N V Y+ LI  LC
Sbjct: 411 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 470

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   +++AL  F         PD+ T+  LI G CK  +  EA+ LY  ML  G++ + +
Sbjct: 471 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530

Query: 204 LLSTLADYNLQSSGSQE 220
             +TL    L+    QE
Sbjct: 531 TYNTLIHAFLRRGAMQE 547



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 5/178 (2%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PD+ T+N  I G C + R+ EA +L +++      PNS T+ +L+   C+ G++D+A
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-YEEMCENNISPNIVSYSILID 140
            M+ +K+    P  NVV ++ LI+GY     +  A  V +E M      P+I +Y+ LI 
Sbjct: 342 RMLLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           GLCK+G +  A    +        P+V+TY ILI  +CK GR  EA  + D M   G+
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGL 455



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  +G+ P + T+  ++   C +N +D A  L + +T     PN+I +  LI A  
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+++   +  +ML  G   +V T++  I G  K   +  A  + + M     +PN  
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ-LYDS 192
           +Y +L+ GLC+ G ++EA       L+    P+VV +  LI GY   GR  EA   +++S
Sbjct: 324 TYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHES 379

Query: 193 MLRNGIMPDGLLLSTL 208
           ML  G  PD    +TL
Sbjct: 380 MLSVGCGPDIFTYNTL 395



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 48/103 (46%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           +Y+ ++D        K   +V+ EM    ISP + ++ +++  LC    ++ A       
Sbjct: 184 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 243

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +  +P+ + Y  LI    K GR  E ++L + ML  G +PD
Sbjct: 244 TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPD 286


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++ D G +P+++TY +++ G C + +L EAV LF ++      P+ + + +
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F K+G M +A  +F +MLEKG    V TY+ L+ G+ +         ++++M    
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PNI +++ L+DG CK G M EA   F         PDVV+Y  LIRG C  G+P EA 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +L   M+R+G+ PD +  + L D     SG+ +H I
Sbjct: 283 RLLREMIRSGVGPDIVSYNILID-GYSKSGALDHAI 317



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K    D     +  +   G  P+  TY  ++   C   R +EA  +F  +      P
Sbjct: 26  VLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSP 85

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  +++ILI   C+  ++D+A  + ++M++ G + NVVTY  L+ G  K   +K A D++
Sbjct: 86  NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLF 145

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M      P+ V Y++LIDG  K+G M EA   F   L+   +P V TY  L+ G+ + 
Sbjct: 146 SRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRK 205

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G       L+  MLR G +P+    + L D
Sbjct: 206 GEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +LF ++ ++G  P + TYN+++ G+           LF+ +      PN  
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+D FCK G M +A  +F +M   G   +VV+Y+ LI G         A  +  EM
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+IVSY+ILIDG  K G ++ A+  F+    + L PD  +Y+ +I   C+AG+ 
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  ++  M+ NG  PD  ++  L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPL 373



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 6/200 (3%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  +  +G  P+I T+N ++ G+C +  + EA +LF ++  +   P+ +++  LI   C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            +G+  +A  +  +M+  G   ++V+Y+ LIDGY KS  +  A  ++ E+ ++ + P+  
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           SYS +ID LC+ G +  A   F   + N   PD      L+ G C+  R TE+ +L+ +M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393

Query: 194 LRNGIMPDGLLLSTLADYNL 213
           ++   +P       + +YNL
Sbjct: 394 VKFECVP------LIPEYNL 407



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 102/191 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++   G  PD+++YNT+I G CS  +  EA +L  ++    + P+ +++ ILID
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G +D A  +F ++ + G + +  +YS +ID   ++  + +AF V+++M  N  +P
Sbjct: 306 GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +      L+ GLC+   + E+   F   +    +P +  Y +L+   CKA R  +  +++
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIF 425

Query: 191 DSMLRNGIMPD 201
             +   G  PD
Sbjct: 426 HELTERGFSPD 436



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 6/190 (3%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++YN ++       R D     +  +      PN+ T+  L+ + C+  R ++A  +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G   NV +YS LI G  + Q +  A ++  EM +    PN+V+Y  L+ GLCK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++EA+  F   +     PD V Y +LI G+ K G   EA +L++ ML  G +P      T
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP------T 191

Query: 208 LADYNLQSSG 217
           +  YN   SG
Sbjct: 192 VFTYNSLLSG 201



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 80/155 (51%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           V     ++++  L++   K GR D     ++ ML  G   N  TY  L+    ++Q  + 
Sbjct: 11  VHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  V+  M     SPN+ SYSILI GLC+   ++EA    +  +D    P+VVTY  L+ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G CK G+  EA+ L+  M+  G  PDG++ + L D
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 85/164 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   G+ PDI++YN +I GY     LD A++LF ++    L+P++ +++ +ID
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ G++  A ++F  M+  G   +      L+ G  + + +  + ++++ M +    P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            I  Y++L+  LCK    ++    FH   +    PDV    +++
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 68/139 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+KLF ++   GLEPD  +Y+TII   C   ++  A  +F+ +      P++ 
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
               L+   C+  R+ ++  +F  M++      +  Y+ L+    K++      +++ E+
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL 428

Query: 124 CENNISPNIVSYSILIDGL 142
            E   SP++    ++++ L
Sbjct: 429 TERGFSPDVEISKVILETL 447


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 117/206 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A +L  ++TD G  PD++TY+T+I G CS+ R+D+A  L E +   Q KP  +
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   LI   CK GR+ +A  +   M+  G   +VVTY+ L+ G+ ++   + A ++  +M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++PN+V+Y+ L+ GLCK   + EA   F     +   P++ TY  LI G+C AG+ 
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
              ++L+  M+  GI PD ++  TLA
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLA 472



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A KLF ++ D G+ P  +TYN +I G C    LDEA++LF+ +     +P+
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILIDA CK G++D+A  +  +M + G   +VVTYS LI G      +  A  + E
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P +V+ + LI GLCK G ++EA       + +   PDVVTY  L+ G+C+AG
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A +L   M+  G+ P+
Sbjct: 375 QTERARELLSDMVARGLAPN 394



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 113/202 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  LF +L   G+ P  + Y ++I G C  N  D+A +LF  +      P+
Sbjct: 20  LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ++IDA CK G +++A  +  KM+E G   +VVTY+ ++DG  KS  ++ A  ++ 
Sbjct: 80  PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +PN  S++ +I GLC++  +++A   FH      + PD  +Y ILI G  KAG
Sbjct: 140 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAG 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
           +  EA +L+  ML +GI P  +
Sbjct: 200 KLNEAYKLFQRMLDSGITPSAV 221



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL LF ++   G  P+  ++NTII G C  +++D+A Q+F ++    + P+
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S ++ ILID   K G++++A  +F +ML+ G   + VTY+ +I G   +  +  A ++++
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+  +++ILID  CKRG ++EA        D+  +PDVVTY+ LI G C   
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A  L + M++    P  +  +TL
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTL 331



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A  L  ++ + G  PD++TYNT++ G C  +R++EA+ LF ++  +   PN  
Sbjct: 92  KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 151

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +   +I   C++ ++D A  +F +M  K    +  +Y  LIDG  K+  +  A+ +++ M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ I+P+ V+Y+++I G+C    ++EAL  F         P   T+ ILI  +CK G+ 
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +L   M  +G +PD +  STL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTL 296



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 85/144 (59%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+S ++ ILID   K G+++DA  +F K+L  G   + V Y+ LI G   + +   A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           +++ +M      P+ V+Y+++ID  CKRG++EEA       +++  +PDVVTY  ++ G 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK+ R  EA+ L++ M R G  P+
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPN 149



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 4/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++   +   G  PD++TYNT++ G+C   + + A +L   +    L PN
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+   CK  R+ +A  +F++M   G   N+ TY+ LI G+  +  +     ++ 
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYC 178
           EM    ISP+ V Y  L   LCK G    AL        +L +    D V Y   + G  
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLL 513

Query: 179 KAGRPTEAMQLYDSMLRNGIMP 200
           +AG+   A+     M+R G +P
Sbjct: 514 EAGKMEMALGFVRDMVRGGQLP 535



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 2/152 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +F Q+   G  P++ TY  +I G+CS  ++D  ++LF ++ C  + P+
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE--KGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            + +  L    CK GR   A  +  +  E  +        Y   +DG  ++  M+ A   
Sbjct: 465 HVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGF 524

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
             +M      P     + L+ GLCK G   EA
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%)

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E N+SP+  SY ILIDGL K G + +A   F   L + + P  V Y  LI G C A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             +A +L+  M R G  P  +  + + D + +    +E C
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 100


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 118/202 (58%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             L+ A KLF  L DRG++ ++ +YN +I GYC   ++DEA + FE++    LKP+++T+ 
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             LI A C+ GR+  A  +F +M   G    + TY  L+DG  K+ +++ A D+++ + + 
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               PNI  +SIL+DG+C+ G +EEA   F     N L PD + Y ILI G C  G  +EA
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 1419

Query: 187  MQLYDSMLRNGIMPDGLLLSTL 208
            ++L   M   G +PD +  + +
Sbjct: 1420 VKLLWQMEEKGCLPDSITFNVI 1441



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 119/200 (59%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L KE  +  A ++   +  +G EPDI+TYNT++ G C + +L++A +LFE L    +K N
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++ ILI+ +CK+ ++D+A   F +M  KG K + VTY+ LI    +S  +++A  ++ 
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM        + +Y +L+DGLCK G +EEA+  F         P++  ++IL+ G C+AG
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
            +  EA + +D + +NG+ PD
Sbjct: 1380 KLEEAWKQFDEISKNGLEPD 1399



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 111/198 (56%), Gaps = 1/198 (0%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A++LF ++T +GL  D  TY  +I G C   +   A++L EK+     K +  T+ ++ID
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIID 1093

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            A CK+G   +A  MFS+M+  G   +VV YS L+DG  +   +K A + ++EM    IS 
Sbjct: 1094 ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 1153

Query: 131  NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            ++ +Y+ LI GL + GL +E  +  +  +D    PD  T+ ILI G CK G+  EA Q+ 
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213

Query: 191  DSMLRNGIMPDGLLLSTL 208
            + M   G  PD L  +TL
Sbjct: 1214 ELMRHKGKEPDILTYNTL 1231



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 108/207 (52%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K+     AL +F ++   G+ PD++ Y++++ G C   RL EA++ F+++    +  +
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              T+  LI    + G   + T   + M+++G   +  T++ LIDG  K   +  A  + E
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M      P+I++Y+ L++GLC  G +E+A   F    D  +  +V +Y ILI GYCK  
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  EA + ++ M   G+ P  +  +TL
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTL 1301



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 21   RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
            RG EPD +T  T++ G    N + +AVQLF+++T   L  ++ T+ ILI+  CK  +   
Sbjct: 1010 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGL 1069

Query: 81   ATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +  KM  KG  K +V TY  +ID   K      A D++ EM    I P++V YS L+
Sbjct: 1070 AIKLHEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127

Query: 140  DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            DGLC+ G ++EAL  F       +  DV TY  LI G  +AG   E     + M+  G  
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187

Query: 200  PDGLLLSTLAD 210
            PD    + L D
Sbjct: 1188 PDAFTFTILID 1198



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 8    LDAALKLFGQLTDRGL----EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            L+ A+KLF    DR L     P   T+N ++     L        ++ K+  V ++P+  
Sbjct: 927  LNDAIKLF----DRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLY 982

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T  ILI   C    +     +F   L++G + + VT + L+ G +    +  A  +++EM
Sbjct: 983  TLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEM 1042

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  +  +  +Y ILI+GLCK      A+   H  +  +   DV TY ++I   CK G  
Sbjct: 1043 TKKGLLGDAKTYGILINGLCKARKTGLAI-KLHEKMKGNCKGDVFTYGMIIDALCKDGMT 1101

Query: 184  TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            TEA+ ++  M+  GI+PD ++ S+L D
Sbjct: 1102 TEALDMFSEMIGAGILPDVVVYSSLMD 1128



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 35/206 (16%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTII---------------------CG------ 36
            K+  +D A + F ++  +GL+P  +TYNT+I                     CG      
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331

Query: 37   -YCSL-------NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
             YC L         L+EA+ LF+ +   + KPN   F+IL+D  C+ G++++A   F ++
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 1391

Query: 89   LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             + G + + + Y+ LI+G      +  A  +  +M E    P+ ++++++I  L K   +
Sbjct: 1392 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 1451

Query: 149  EEALYAFHCALDNHLLPDVVTYAILI 174
             EA+       + +  PD    ++L+
Sbjct: 1452 HEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 76/138 (55%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  HL+ A+ LF  +     +P+I  ++ ++ G C   +L+EA + F++++   L+P+
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 1399

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +I + ILI+  C +G + +A  +  +M EKG   + +T++ +I    K   +  A  + E
Sbjct: 1400 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 1459

Query: 122  EMCENNISPNIVSYSILI 139
            EM   N SP+    S+L+
Sbjct: 1460 EMRNRNFSPDEAVTSMLL 1477



 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            L  A+KL  Q+ ++G  PD IT+N II      N + EA+QL E++      P+    ++
Sbjct: 1416 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 1475

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKG 92
            L+     + +   A +     L+KG
Sbjct: 1476 LLCLASFDPQWHAALVSLPNALQKG 1500


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 127/221 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +F  +T++GLEPD+ TYN ++ GYCS +++DEA +LF  +      PN
Sbjct: 160 LCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPN 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+  CK GR+D+A  + ++M  K    ++ TYS L+ G+ +    + A ++ +
Sbjct: 220 VRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLK 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC   + PN+++YSI++DGLCK G ++EA        ++ + P++  Y ILI G C  G
Sbjct: 280 EMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG 339

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +   A +L+ ++   GI P  +  + +    L+   S E C
Sbjct: 340 KLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380



 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 9/212 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KLF ++   G EPD+ITY+TII G C +     A+QL +K+     KPN + +  +ID
Sbjct: 29  AVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIID 88

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+  + +A   FS+M+++G   +V TYS ++ G+     +  A  ++++M E N+ P
Sbjct: 89  SLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIP 148

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++ILIDGLCK+ ++ EA   F    +  L PDV TY  L+ GYC   +  EA +L+
Sbjct: 149 NKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLF 208

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + M R G  P+      +  YN+  +G   HC
Sbjct: 209 NIMDRKGCAPN------VRSYNILING---HC 231



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 117/210 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L  ++ ++G +P+++ YNTII   C    + EA+  F ++    + P+  T++ ++ 
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  GR+++AT +F +M+E+    N VT++ LIDG  K + +  A+ V+E M E  + P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ L+DG C R  M+EA   F+        P+V +Y ILI G+CK+GR  EA  L 
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M    + PD    STL     Q    QE
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQE 273



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 110/195 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KLF  +  +G  P++ +YN +I G+C   R+DEA  L  +++   L P+  T++
Sbjct: 200 QMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYS 259

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FC+ GR  +A  +  +M   G   N++TYS ++DG  K  ++  AF++ + M E+
Sbjct: 260 TLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQES 319

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PNI  Y+ILI+G+C  G +E A   F       + P VVTY ++I G  K G   EA
Sbjct: 320 KIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEA 379

Query: 187 MQLYDSMLRNGIMPD 201
            +L+  M  NG +P+
Sbjct: 380 CELFREMAVNGCLPN 394



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 112/189 (59%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL+P ++T+NT++ G CS  ++ +AV+LF+++  +  +P+ IT++ +I+  CK G    A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  KM EKG K NVV Y+ +ID   K + +  A D + EM +  I P++ +YS ++ G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C  G + EA   F   ++ +++P+ VT+ ILI G CK    +EA  ++++M   G+ PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 202 GLLLSTLAD 210
               + L D
Sbjct: 185 VYTYNALVD 193



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+  F ++   G+ PD+ TY++I+ G+C+L R++EA  LF+++    + PN
Sbjct: 90  LCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPN 149

Query: 62  SITFTILIDAFCK-----------------------------------EGRMDDATMMFS 86
            +TFTILID  CK                                     +MD+A  +F+
Sbjct: 150 KVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFN 209

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M  KG   NV +Y+ LI+G+ KS  +  A  +  EM   +++P+I +YS L+ G C+ G
Sbjct: 210 IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVG 269

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             +EA           LLP+++TY+I++ G CK G   EA +L  +M  + I P+  + +
Sbjct: 270 RPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYT 329

Query: 207 TLAD 210
            L +
Sbjct: 330 ILIE 333



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 2/213 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  +++ + L PDI TY+T++ G+C + R  EA +L +++    L PN I
Sbjct: 232 KSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++I++D  CK G +D+A  +   M E   + N+  Y+ LI+G      +++A +++  +
Sbjct: 292 TYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL 351

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P +V+Y+++I GL K GL  EA   F     N  LP+  TY ++I+G+ + G  
Sbjct: 352 FVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDT 411

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
             A++L + M+  G   D      L+D  L+SS
Sbjct: 412 PNAVRLIEEMVGKGFSADSSTFRMLSD--LESS 442



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A +L   + +  +EP+I  Y  +I G C+  +L+ A +LF  L    ++P 
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T++I    K G  ++A  +F +M   G   N  TY+ +I G+ ++ +  +A  + E
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419

Query: 122 EMCENNISPNIVSYSILID 140
           EM     S +  ++ +L D
Sbjct: 420 EMVGKGFSADSSTFRMLSD 438



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M + G +  +VT++ L+ G      +  A  +++EM +    P++++YS +I+GLCK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
              AL       +    P+VV Y  +I   CK    TEAM  +  M++ GI PD    S+
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 208 L 208
           +
Sbjct: 121 I 121


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 122/210 (58%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +  A +L   +   G+ PD + Y T+I G+C L  +  A +LF+++   ++ P
Sbjct: 321 LLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVP 380

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I   CK G+M +A  MF++ML KG + + VTY+ LIDGY K+  MK AF V+
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +  ++PN+V+Y+ L DGLCK G ++ A    H      L P+V TY  ++ G CK 
Sbjct: 441 NQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKI 500

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   + ++L + M   G  PD +  +TL D
Sbjct: 501 GNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++F ++  +GLEPD +TY  +I GYC    + EA  +  ++    L PN +
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L D  CK G +D A  +  +M  KG + NV TY+ +++G  K  N++    + EEM
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+ ++Y+ L+D  CK G M +A       L+  L P +VT+ +L+ G+C +G  
Sbjct: 514 DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  +L + ML  GIMP+    ++L
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSL 598



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  LKL  +L  +GL+PD   YN II   C    + EA QL   +    + P+++ +T 
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FCK G +  A  +F +M  K    ++VTY+ +I G  KS  M  A +++ EM    
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+Y+ LIDG CK G M+EA    +  +   L P+VVTY  L  G CK G    A 
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M R G+ P+    +T+ +
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVN 495



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E H      L  Q+TDRG  PD+++Y  ++ GYC +  LD+ ++L ++L    LKP+ 
Sbjct: 258 VREAH-----NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDE 312

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  +I   CK G + +A  +   M + G   + V Y+ +I G+ K  N+ +A  +++E
Sbjct: 313 YIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDE 372

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P+IV+Y+ +I G+CK G M EA   F+  L   L PD VTY  LI GYCKAG 
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  +++ M++ G+ P+ +  + LAD
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALAD 460



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 109/196 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L  +++ +GL+P++ TYNTI+ G C +  +++ V+L E++      P+
Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T L+DA+CK G M  A  +   ML K  +  +VT++ L++G+  S  ++    + E
Sbjct: 522 TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I PN  +++ L+   C +  M      +    D  ++PD  TY ILI+G+CKA 
Sbjct: 582 WMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKAR 641

Query: 182 RPTEAMQLYDSMLRNG 197
              EA  L+  M+  G
Sbjct: 642 NMKEAWFLHKEMVEKG 657



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 112/213 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++  +KL  ++   G  PD ITY T++  YC +  + +A +L   +   +L+P  +TF 
Sbjct: 502 NIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFN 561

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++ FC  G ++D   +   MLEKG   N  T++ L+  Y    NM++  ++Y+ M + 
Sbjct: 562 VLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+  +Y+ILI G CK   M+EA +     ++        TY  LIRG+ K  +  EA
Sbjct: 622 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEA 681

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
            +L++ M ++G++ +  +     D N +    +
Sbjct: 682 RKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWE 714



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 100/199 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  +  Q+  +GL P+++TY  +  G C    +D A +L  +++   L+PN  
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK G ++    +  +M   G   + +TY+ L+D Y K   M  A ++   M
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P +V++++L++G C  G++E+        L+  ++P+  T+  L++ YC     
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 184 TEAMQLYDSMLRNGIMPDG 202
               ++Y +M   G+MPD 
Sbjct: 609 RATTEIYKAMHDRGVMPDS 627



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 92/184 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   + ++ L+P ++T+N ++ G+C    L++  +L E +    + PN+ TF  L+ 
Sbjct: 541 AHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMK 600

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C +  M   T ++  M ++G   +  TY+ LI G+ K++NMK A+ +++EM E   S 
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSV 660

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y  LI G  KR    EA   F     + L+ +   Y I +    + G     ++L 
Sbjct: 661 TAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELC 720

Query: 191 DSML 194
           D  +
Sbjct: 721 DEFM 724



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+K+F +  + G+  + ++ N ++   C L ++ EA  L  ++T     P+ +++ +
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  +C+ G +D    +  ++  KG K +   Y+ +I    K+  +  A  +   M +  
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y+ +I G CK G +  A   F       ++PD+VTY  +I G CK+G+  EA 
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++++ ML  G+ PD +  + L D
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALID 425



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 73/145 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   +L   + ++G+ P+  T+N+++  YC  N +    ++++ +    + P+S T+ I
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK   M +A  +  +M+EKG      TY  LI G++K +    A  ++EEM ++ 
Sbjct: 633 LIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL 152
           +      Y I +D   + G  E  L
Sbjct: 693 LVAEKDIYDIFVDVNYEEGNWEITL 717



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 4/119 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ A  +++  + DRG+ PD  TYN +I G+C    + EA  L +++        + T+ 
Sbjct: 607 NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LI  F K  +  +A  +F +M + G  A    Y   +D  ++  N    +++  E+C+
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN----WEITLELCD 721



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 18/188 (9%)

Query: 26  DIITYNTIICGYCSLNRLD--EAVQLFEKLTCVQLK---PNSITFTILIDAFCKEGRMDD 80
           DI T   ++  +C+  ++D  ++  LF ++     K    + + F +      + G + +
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLE 189

Query: 81  ATMMFSKMLEKGPKANVVT-------YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           A  +F K+L  G   +V +        SC  +G      +K A  V+EE  E  +  N V
Sbjct: 190 AQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEG------IKIAVKVFEEFPELGVCWNTV 243

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           S +I++  LC+ G + EA        D    PDVV+Y +++ GYC+ G   + ++L D +
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 194 LRNGIMPD 201
              G+ PD
Sbjct: 304 KGKGLKPD 311


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 117/202 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+L   +  +G+  D+ TYN +  G C L+R DEA  +   +    +KPN +TFT+
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I+ +CKEG + +A  +F  M +KG   N++TY+ LID Y K + +K A  +  EM    
Sbjct: 468 FIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKG 527

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +YS LI G C  G ++EAL  F+      +  +V TY  +I G  K GR  EA 
Sbjct: 528 LLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAF 587

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
           +LYD M++ G++PD  + ++L 
Sbjct: 588 KLYDEMMKIGLIPDDRVFTSLV 609



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 113/195 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++AA  L  ++  +G++ +++ +NT + GYC   ++DEA++L   +    +  +  
Sbjct: 369 KAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVF 428

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL +  CK  R D+A  + + M+EKG K NVVT++  I+ Y K  N+  A  ++ +M
Sbjct: 429 TYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDM 488

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PNI++Y+ LID  CK+  +++A       ++  LLPD+ TY+ LI G C  GR 
Sbjct: 489 EKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRV 548

Query: 184 TEAMQLYDSMLRNGI 198
            EA++L++ M   GI
Sbjct: 549 DEALKLFNEMRLKGI 563



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 118/217 (54%), Gaps = 1/217 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+F ++ ++ +E D+  Y+++I     L  +  A  LF++++   + PN+ T+  
Sbjct: 303 IEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGA 362

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK G+M+ A ++  +M  KG   N+V ++  +DGY +   M  A  +   M +  
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+ ++ +Y+IL +GLCK    +EA    +  ++  + P+VVT+ + I  YCK G   EA 
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEHCI 223
           +L+  M + G +P+ +  +TL D Y  +    Q H I
Sbjct: 483 RLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI 519



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A  LF +++ R + P+  TY  +I G C   +++ A  L  ++    +  N + F 
Sbjct: 337 NMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFN 396

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             +D +C+ G+MD+A  + + M +KG  A+V TY+ L +G  K      A  +   M E 
Sbjct: 397 TTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEK 456

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V++++ I+  CK G + EA   F        +P+++TY  LI  YCK  +  +A
Sbjct: 457 GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            ++   M+  G++PD    S+L
Sbjct: 517 HKIKSEMINKGLLPDLYTYSSL 538



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 7/214 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNR---LDEAVQLFEKLTCV 56
           +L +   ++ A +L  ++  +G+ +P++ TYNT++  Y        +DE ++L EK    
Sbjct: 225 VLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEK---E 281

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           Q+  +  T++ILI  +   G +++A  +F +M EK  + +V  YS +I    +  NMK A
Sbjct: 282 QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRA 341

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F +++EM + +I PN  +Y  LI G+CK G ME A           +  ++V +   + G
Sbjct: 342 FALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDG 401

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           YC+ G+  EA++L   M + GI  D    + LA+
Sbjct: 402 YCRRGKMDEALRLQAIMEKKGINADVFTYNILAN 435



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 4/192 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  +   + ++G++P+++T+   I  YC    L EA +LF  +      PN IT+  L
Sbjct: 444 DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTL 503

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA+CK+ ++  A  + S+M+ KG   ++ TYS LI G      +  A  ++ EM    I
Sbjct: 504 IDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGI 563

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK----AGRPT 184
           + N+ +Y+ +I GL K G  +EA   +   +   L+PD   +  L+  + K    AG   
Sbjct: 564 TRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAGLDI 623

Query: 185 EAMQLYDSMLRN 196
           +     DS+LR 
Sbjct: 624 QKASDSDSVLRR 635



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 47/221 (21%)

Query: 1   MLIKECH----LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---LDEAVQLFEKL 53
           ML + C      D  ++++  + ++GL   +I   +      +L R   +D  V+ F ++
Sbjct: 150 MLFRVCSDNRLFDETIRVYDYVEEKGL---VIEERSCFVLLLALKRCGEVDFCVRFFHRM 206

Query: 54  T-CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQ 111
               + +    + T++ID  C+ G ++ A  +  +M+ KG  K NV TY+ L++ Y   +
Sbjct: 207 VESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRK 266

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           + K                        +D + K  LME+    F           V TY+
Sbjct: 267 DRKG-----------------------VDEILK--LMEKEQVVF----------SVATYS 291

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           ILI+ Y  +G   EA ++++ M    I  D  + S++  ++
Sbjct: 292 ILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWS 332


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 121/204 (59%), Gaps = 4/204 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++L G++ D    PD++TY T++  +C + RLD+A +LF+++   +L P+ +TFT 
Sbjct: 262 MDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  C EGRM+DA  +  ++  +G    + TY+C++DGY K+  ++ A ++  +     
Sbjct: 322 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG 381

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP---DVVTYAILIRGYCKAGRPT 184
             PN V+Y+IL+ G C+ G  ++AL      L++   P    V  YAI++   C+ GR  
Sbjct: 382 FVPNTVTYNILVAGCCRAGRTDQALQYLD-QLNSEGGPCPTSVAMYAIILDALCRDGRTD 440

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +A+Q Y+ M++ G +P     +T+
Sbjct: 441 DAVQFYEEMIQRGYVPAAATFATV 464



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 32/236 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +L  ++  RG+  + ITY+ ++ G C   RLDEAV L E +      P  +T+ 
Sbjct: 89  RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYN 148

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  FC+  R+D+A     +M+ +G   +++TY+ LI G+ KS+++    ++  E+   
Sbjct: 149 SIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR 208

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH---CA------------------------- 158
             +P+IV+YS +IDGLCK G + +A+  F    CA                         
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRL 268

Query: 159 ----LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +D+   PDVVTY  L+  +CK GR  +A +L+  M+ N + PD +  ++L D
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 324



 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 32/219 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-------------- 56
            L+L G++T RG  PDI+TY+T+I G C   RL +AV +FE+++C               
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYC 257

Query: 57  ------------------QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
                             +  P+ +T+T L+ AFCK GR+DDA  +F +M+      +VV
Sbjct: 258 RAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 317

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T++ L+DG      M+ A ++ EE+      P I +Y+ ++DG CK   + +A       
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
                +P+ VTY IL+ G C+AGR  +A+Q  D +   G
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 32/226 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A+ L   + +RG  P ++TYN+II G+C   R+DEA    E++      P+ IT+T
Sbjct: 124 RLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYT 183

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM--- 123
            LI  FCK   +     +  ++  +G   ++VTYS +IDG  K+  ++ A D++EEM   
Sbjct: 184 ALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 243

Query: 124 -----------------------------CENNISPNIVSYSILIDGLCKRGLMEEALYA 154
                                         ++  +P++V+Y+ L+   CK G +++A   
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           F   + N L PDVVT+  L+ G C  GR  +A++L + + R G  P
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL ++ Q+ D    PD +TY  ++ G     RL +AVQ+ +++   +  P+
Sbjct: 15  LCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPD 73

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T T+++ + C   R+DDA  +  +ML +G  AN +TYS L+DG  K + +  A  + E
Sbjct: 74  NTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVE 133

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   +P +V+Y+ +I G C+   ++EA       +     PD++TY  LI G+CK+ 
Sbjct: 134 TMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSR 193

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                ++L   + R G  PD +  ST+ D
Sbjct: 194 DVGRGLELLGEVTRRGFTPDIVTYSTVID 222



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 2/150 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-PNS 62
           K   +  A +L      RG  P+ +TYN ++ G C   R D+A+Q  ++L       P S
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422

Query: 63  IT-FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  + I++DA C++GR DDA   + +M+++G      T++ ++    K+   + A ++ E
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 482

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM +   +P   +   ++   C+ G++++A
Sbjct: 483 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 36/186 (19%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P ++   ++I   C+ GR+  A  ++ +M +  P  + +TY+ L+ G  K++ ++ A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP-DFLTYTKLVHGLSKARRLRDAV 59

Query: 118 DV-----------------------------------YEEMCENNISPNIVSYSILIDGL 142
            V                                    EEM    ++ N ++YS L+DGL
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK   ++EA+       +    P VVTY  +I G+C+A R  EA    + M+  G  PD 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 203 LLLSTL 208
           +  + L
Sbjct: 180 ITYTAL 185



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 2/117 (1%)

Query: 9   DAALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D AL+   QL   G      +  Y  I+   C   R D+AVQ +E++      P + TF 
Sbjct: 403 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ A CK  +   A  +  +M++ G      T   ++  Y ++  ++ A ++  E+
Sbjct: 463 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 43/87 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++   D A++ + ++  RG  P   T+ T++   C  ++  +A +L E++      P 
Sbjct: 433 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 492

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM 88
             T   ++ A+C+ G +  A  + S++
Sbjct: 493 PGTCDAVVSAYCRAGMIQKADELASEL 519


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 135/252 (53%), Gaps = 35/252 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ PD ITYN++I G+C  N L EA Q+F+ +     +P
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 412

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T++ILI+++CK  R+DD   +F ++  KG   N +TY+ L+ G+ +S  + +A +++
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 472

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------------------- 152
           +EM    + P++V+Y IL+DGLC  G + +AL                            
Sbjct: 473 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 532

Query: 153 ------YAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                 ++  C+L D  + PDVVTY ++I G CK G  +EA  L+  M  +G  PD    
Sbjct: 533 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 592

Query: 206 STLADYNLQSSG 217
           + L   +L  SG
Sbjct: 593 NILIRAHLGGSG 604



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 125/213 (58%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D AL LF ++  +G++ D++TY+++I G C+  + D+  ++  ++    + P+
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LID F KEG++ +A  ++++M+ +G   + +TY+ LIDG+ K   +  A  +++
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+IV+YSILI+  CK   +++ +  F       L+P+ +TY  L+ G+C++G
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
           +   A +L+  M+  G+ P     G+LL  L D
Sbjct: 464 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++ +R ++  ++ Y+ +I   C     D+A+ LF ++    +K + +T++ LI 
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +G+ DD   M  +M+ +    +VVT+S LID + K   +  A ++Y EM    I+P
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ LIDG CK   + EA   F   +     PD+VTY+ILI  YCKA R  + M+L+
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437

Query: 191 DSMLRNGIMPDGLLLSTLA 209
             +   G++P+ +  +TL 
Sbjct: 438 REISSKGLIPNTITYNTLV 456



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 117/200 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G+    G EPD IT++T++ G+C   R+ EAV L +++  ++ +P+ +T + LI+
Sbjct: 153 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 212

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +GR+ +A ++  +M+E G + + VTY  +++   KS N   A D++ +M E NI  
Sbjct: 213 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V YSI+ID LCK G  ++AL  F+      +  DVVTY+ LI G C  G+  +  ++ 
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+   I+PD +  S L D
Sbjct: 333 REMIGRNIIPDVVTFSALID 352



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 113/206 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+ L  ++ +    PD++T +T+I G C   R+ EA+ L +++     +P+ +T
Sbjct: 182 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 241

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +++  CK G    A  +F KM E+  KA+VV YS +ID   K  +   A  ++ EM 
Sbjct: 242 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 301

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I  ++V+YS LI GLC  G  ++        +  +++PDVVT++ LI  + K G+  
Sbjct: 302 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 361

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +LY+ M+  GI PD +  ++L D
Sbjct: 362 EAKELYNEMITRGIAPDTITYNSLID 387



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 109/195 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +   D   K+  ++  R + PD++T++ +I  +    +L EA +L+ ++    + P+
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LID FCKE  + +A  MF  M+ KG + ++VTYS LI+ Y K++ +     ++ 
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + PN ++Y+ L+ G C+ G +  A   F   +   + P VVTY IL+ G C  G
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 182 RPTEAMQLYDSMLRN 196
              +A+++++ M ++
Sbjct: 499 ELNKALEIFEKMQKS 513



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 117/217 (53%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ +GL P+ ITYNT++ G+C   +L+ A +LF+++    + P+ +
Sbjct: 426 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 485

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G ++ A  +F KM +      +  Y+ +I G   +  +  A+ ++  +
Sbjct: 486 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 545

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++V+Y+++I GLCK+G + EA   F    ++   PD  TY ILIR +      
Sbjct: 546 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 605

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
             +++L + M   G   D     +++  L+D  L  S
Sbjct: 606 ISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 642



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 97/208 (46%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I +  ++ A+ LF  +      P  I +N +        + D  +   + +    ++ + 
Sbjct: 75  IVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDM 134

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T TI+I+ +C++ ++  A  +  +  + G + + +T+S L++G+     +  A  + + 
Sbjct: 135 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 194

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P++V+ S LI+GLC +G + EAL      ++    PD VTY  ++   CK+G 
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L+  M    I    +  S + D
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVID 282


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+   KL  ++ + G EPD  +YNT++   C   + +EA ++ EK+   +  P+
Sbjct: 207 LCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPD 266

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D FCK  +MD+A  +   M+ +     V+TY+ LI G+ ++  +  A+ V E
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME 326

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ISP++V+Y+ L+DGLCK G +EEA       ++    PDVVTY+IL+ G CK G
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A  L + ML  G  P+ +  +T+ D
Sbjct: 387 KVDDARLLLEMMLERGCQPNLVTFNTMID 415



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 122/202 (60%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A K+  ++ ++   PD++TYN+++ G+C ++++DEA +L E +   +  P  IT+T L
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  F +  R+ DA  +   M + G   ++VTY+CL+DG  K+  ++ A ++ E M E + 
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P++V+YSIL++GLCK G +++A       L+    P++VT+  +I G+CKAG+  E  +
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           + + M      PD +  STL D
Sbjct: 429 VLELMKEVSCTPDVVTYSTLID 450



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DAA  +   + +R   PD+ITY ++I G C  N LDEA +L EK+    L P+
Sbjct: 137 LCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPD 196

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  L++  CK+ ++++ + +  +M+E G + +  +Y+ ++    +S   + A  + E
Sbjct: 197 TVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE 256

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    P++V+Y+ L+DG CK   M+EA       +     P V+TY  LI G+ +A 
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A ++ + M + GI PD +  + L D
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLD 345



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 41/244 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A +L   + ++   PD++TY+ ++ G C L ++D+A  L E +     +PN
Sbjct: 347 LCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPN 406

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +ID FCK G++D+   +   M E     +VVTYS LIDGY K+  M+ AF +  
Sbjct: 407 LVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL- 465

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-------------HCAL--------- 159
                 ISP+  SYS +++GLC  G +EEA                 H AL         
Sbjct: 466 -----GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVE 520

Query: 160 -------------DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                        +    P++ TY+ILI G CK  R  +A+ + D ML  G +PD    +
Sbjct: 521 RGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYT 580

Query: 207 TLAD 210
           +L D
Sbjct: 581 SLID 584



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 30/251 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L   + +RG +P+++T+NT+I G+C   ++DE  ++ E +  V   P+
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 62  SITFTILIDAFCKEGRMDDATMM---------FSKMLE--------------------KG 92
            +T++ LID +CK  RM DA  +         +S MLE                    +G
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                  Y+ +I G    +    A  + + M E    PN+ +YSILI+GLCK   +E+A+
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAI 561

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
                 L+   +PDV TY  LI G+CK  +   A Q + +M  +G  PD L  + L    
Sbjct: 562 NVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGF 621

Query: 213 LQSSGSQEHCI 223
            Q SG+ E  I
Sbjct: 622 CQ-SGNVEKAI 631



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 101/181 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD  +Y++++ G CS  +++EA ++ + +T     P S  + ++I   C   R D+A
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             M   M E+G + N+ TYS LI+G  K++ ++ A +V + M E    P++ +Y+ LIDG
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK   M+ A   F    D+   PD + Y ILI G+C++G   +A+++   ML  G  PD
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPD 645

Query: 202 G 202
            
Sbjct: 646 A 646



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 4/198 (2%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE-KLTCVQLKPNSITFTILID 70
           L++  ++  R   PD+IT+NTI+  YC +  LD A+  F  K+ C    P + T+ ILI 
Sbjct: 44  LEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWC---SPTAFTYCILIH 100

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  R+D+A  +  +M++K    +   Y+CLI G  K   + +A +V + M E +  P
Sbjct: 101 GLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVP 160

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y+ LI G C+   ++EA        ++ L PD V Y  L+ G CK  +  E  +L 
Sbjct: 161 DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+  G  PD    +T+
Sbjct: 221 EEMVEAGREPDTFSYNTV 238



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 100/202 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +L  ++  +   PD   YN +I G C + ++D A  + + +      P+ IT+T
Sbjct: 107 RIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYT 166

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C+   +D+A  +  KM E G   + V Y+ L++G  K   ++    + EEM E 
Sbjct: 167 SLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA 226

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+  SY+ ++  LC+ G  EEA       ++    PDVVTY  L+ G+CK  +  EA
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEA 286

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L + M+     P  +  +TL
Sbjct: 287 ERLLEDMVGRRCAPTVITYTTL 308



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 96/169 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A ++   +T +G  P    Y  II G C + R DEA+++ + ++    +PN  T++
Sbjct: 486 KVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYS 545

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+  CK  R++DA  +   MLEKG   +V TY+ LIDG+ K   M +A+  ++ M ++
Sbjct: 546 ILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDS 605

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
              P+ ++Y+ILI G C+ G +E+A+      L+    PD  TY  L+R
Sbjct: 606 GCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMR 654



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 77/134 (57%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D ALK+   +++RG EP++ TY+ +I G C   R+++A+ + + +      P+  T+T L
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID FCK  +MD A   F  M + G + + + Y+ LI G+ +S N++ A +V + M E   
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGC 642

Query: 129 SPNIVSYSILIDGL 142
           +P+  +Y  L+  L
Sbjct: 643 NPDAATYFSLMRSL 656



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 37/185 (20%)

Query: 59  KPNSITFTILI-----------------------------------DAFCKEGRMDDATM 83
           KP++ T+  LI                                    A+C+ G +D A  
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
            F   +   P A   TY  LI G  + Q +  A+ + +EM + +  P+   Y+ LI GLC
Sbjct: 81  HFRGKMWCSPTA--FTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G ++ A       L+   +PDV+TY  LI G C+     EA +L + M  +G+ PD +
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 204 LLSTL 208
             + L
Sbjct: 199 AYNAL 203



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 58/103 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+ +   + ++G  PD+ TY ++I G+C +N++D A Q F+ +     +P+
Sbjct: 551 LCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPD 610

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
            + + ILI  FC+ G ++ A  +   MLEKG   +  TY  L+
Sbjct: 611 KLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 2/124 (1%)

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +      K +  TY  LI G+ ++ N K   ++  EM     SP++++++ ++   C+
Sbjct: 12  FRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQ 71

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G ++ AL  F   +     P   TY ILI G C+  R  EA QL D M++    PD  +
Sbjct: 72  IGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129

Query: 205 LSTL 208
            + L
Sbjct: 130 YNCL 133



 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 38/69 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +DAA + F  + D G EPD + YN +I G+C    +++A+++ + +      P++ T+ 
Sbjct: 591 KMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYF 650

Query: 67  ILIDAFCKE 75
            L+ +   E
Sbjct: 651 SLMRSLTTE 659


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 135/252 (53%), Gaps = 35/252 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ PD ITYN++I G+C  N L EA Q+F+ +     +P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T++ILI+++CK  R+DD   +F ++  KG   N +TY+ L+ G+ +S  + +A +++
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------------------- 152
           +EM    + P++V+Y IL+DGLC  G + +AL                            
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503

Query: 153 ------YAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                 ++  C+L D  + PDVVTY ++I G CK G  +EA  L+  M  +G  PD    
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563

Query: 206 STLADYNLQSSG 217
           + L   +L  SG
Sbjct: 564 NILIRAHLGGSG 575



 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 125/213 (58%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D AL LF ++  +G++ D++TY+++I G C+  + D+  ++  ++    + P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LID F KEG++ +A  ++++M+ +G   + +TY+ LIDG+ K   +  A  +++
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+IV+YSILI+  CK   +++ +  F       L+P+ +TY  L+ G+C++G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
           +   A +L+  M+  G+ P     G+LL  L D
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467



 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++ +R ++  ++ Y+ +I   C     D+A+ LF ++    +K + +T++ LI 
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +G+ DD   M  +M+ +    +VVT+S LID + K   +  A ++Y EM    I+P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ LIDG CK   + EA   F   +     PD+VTY+ILI  YCKA R  + M+L+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 191 DSMLRNGIMPDGLLLSTLA 209
             +   G++P+ +  +TL 
Sbjct: 409 REISSKGLIPNTITYNTLV 427



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 117/200 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G+    G EPD IT++T++ G+C   R+ EAV L +++  ++ +P+ +T + LI+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +GR+ +A ++  +M+E G + + VTY  +++   KS N   A D++ +M E NI  
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V YSI+ID LCK G  ++AL  F+      +  DVVTY+ LI G C  G+  +  ++ 
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+   I+PD +  S L D
Sbjct: 304 REMIGRNIIPDVVTFSALID 323



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 113/206 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+ L  ++ +    PD++T +T+I G C   R+ EA+ L +++     +P+ +T
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +++  CK G    A  +F KM E+  KA+VV YS +ID   K  +   A  ++ EM 
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I  ++V+YS LI GLC  G  ++        +  +++PDVVT++ LI  + K G+  
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +LY+ M+  GI PD +  ++L D
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLID 358



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 109/195 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +   D   K+  ++  R + PD++T++ +I  +    +L EA +L+ ++    + P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LID FCKE  + +A  MF  M+ KG + ++VTYS LI+ Y K++ +     ++ 
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + PN ++Y+ L+ G C+ G +  A   F   +   + P VVTY IL+ G C  G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 182 RPTEAMQLYDSMLRN 196
              +A+++++ M ++
Sbjct: 470 ELNKALEIFEKMQKS 484



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 117/217 (53%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ +GL P+ ITYNT++ G+C   +L+ A +LF+++    + P+ +
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G ++ A  +F KM +      +  Y+ +I G   +  +  A+ ++  +
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++V+Y+++I GLCK+G + EA   F    ++   PD  TY ILIR +      
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 576

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
             +++L + M   G   D     +++  L+D  L  S
Sbjct: 577 ISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 97/208 (46%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I +  ++ A+ LF  +      P  I +N +        + D  +   + +    ++ + 
Sbjct: 46  IVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDM 105

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T TI+I+ +C++ ++  A  +  +  + G + + +T+S L++G+     +  A  + + 
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P++V+ S LI+GLC +G + EAL      ++    PD VTY  ++   CK+G 
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L+  M    I    +  S + D
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVID 253


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ AL +F  +  + + PDI TYN++I G C+  R  EA  L  ++T + + PN
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF +L+DA CKEG++ +A  +F  M E G + +VVTYS L+ GY     +  A  +++
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+  SY+ILI G CK   ++EA   F+  +   L PD V Y  LI G C+ G
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L+ +M  NG +PD    S L D
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLD 453



 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T+ G+EPD++TY++++ GY     + EA +LF+ +     KP++ 
Sbjct: 317 KEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI  +CK  R+D+A  +F++M+ +G   + V Y+ LI G  +   ++ A D+++ M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N   P++ +YS+L+DG CK G + +A   F      +L PD+  Y ILI   CK G  
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +L+  +   G++P+  + +T+
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTI 521



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 112/202 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  +F ++   GL+PD +T+NT+I G C + +  +AV+ F+       +P   T+T
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +F KM E G + NVVTY+ LID   K + +  A D++  M   
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP+I +Y+ LI GLC     +EA    +     +++P++ T+ +L+   CK G+ +EA
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             ++ +M   G+ PD +  S+L
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSL 346



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 4/213 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  +G +PD  +YN +I GYC   R+DEA QLF ++    L P+++ +  LI 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ GR+ +A  +F  M   G   ++ TYS L+DG+ K   +  AF ++  M    + P
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I  Y+ILID +CK G +++A   F       LLP+V  Y  +I   CK G   EA++ +
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538

Query: 191 DSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 219
            +M  +G  PD     +++     Y  +S  +Q
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQ 571



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ F      G +P + TY TII G C +     A  LF+K+     +PN +T+ ILID
Sbjct: 184 AVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILID 243

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+  +++A  +FS M  K    ++ TY+ LI G    +  K A  +  EM   NI P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA------------------- 171
           NI ++++L+D +CK G + EA   F    +  + PDVVTY+                   
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363

Query: 172 ----------------ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                           ILI+GYCKA R  EA QL++ M+  G+ PD +  +TL
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL 416



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 108/199 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +LF ++  +GL PD + YNT+I G C L RL EA  LF+ +      P+  
Sbjct: 387 KAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLF 446

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++L+D FCKEG +  A  +F  M     K ++  Y+ LID   K  N+K A  ++ E+
Sbjct: 447 TYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+  Y+ +I+ LCK GL++EAL AF     +   PD  +Y ++IRG+ +    
Sbjct: 507 FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDE 566

Query: 184 TEAMQLYDSMLRNGIMPDG 202
           + A QL   M   G + + 
Sbjct: 567 SRAAQLIGEMRDRGFVAEA 585



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 105/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A + L  Q+   GL PDI T + +I  +  L R+D A  +F K+  + L+P+++TF  LI
Sbjct: 113 AVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLI 172

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +  CK G+   A   F      G +  V TY+ +I+G  K     +A  ++++M E    
Sbjct: 173 NGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQ 232

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ILID LCK  L+ EAL  F       + PD+ TY  LI+G C   R  EA  L
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M    IMP+    + L D
Sbjct: 293 LNEMTSLNIMPNIFTFNVLVD 313


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL  FG+LT  G  P ++T+NT++ G C  +R+ EA+ LF ++     KPN +TFT 
Sbjct: 31  LPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC----KPNVVTFTT 86

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-N 126
           L++  C+EGR+ +A  +  +M+E G + N +TY  ++DG  K  +  SA ++  +M E +
Sbjct: 87  LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS 146

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +I P++V YS +IDGL K G   +A   F    D  + PD+VTY+ +I G+C +G+ +EA
Sbjct: 147 HIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEA 206

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   ML   I PD +  S L +
Sbjct: 207 QRLLQEMLVRKISPDVVTFSGLIN 230



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 47/248 (18%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ D+G+ PDI+TY+ +I G+CS  +  EA +L +++   ++ P+ +TF+
Sbjct: 168 HTDAQ-NLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-------- 118
            LI+A  KEG ++ A  +  +M+  G   NVVT + L+DG   S  +K A +        
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286

Query: 119 --------------------------------------VYEEMCENNISPNIVSYSILID 140
                                                 +YEEM    I P+ V+YS +I+
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLCK+  ++EA   F         P++VT+  LI GYCKAG   + ++L+  M R GI+ 
Sbjct: 347 GLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVA 406

Query: 201 DGLLLSTL 208
           + +   TL
Sbjct: 407 NAITYITL 414



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 47/256 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P+ ITY TI+ G C +     A+ L  K+  +  +KP
Sbjct: 91  LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY------------- 107
           + + ++ +ID   K+GR  DA  +F +M +KG   ++VTYSC+I+G+             
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 108 ----------------------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                                  K  ++ SA D+ +EM  + + PN+V+ + L+DGLC  
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 146 GLMEEALYAFHCALD-----------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           G +++AL  F                N + PDV TY ILI G    G+  EA +LY+ M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 195 RNGIMPDGLLLSTLAD 210
             GI+PD +  S++ +
Sbjct: 331 HRGIVPDTVTYSSMIN 346



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 118/218 (54%), Gaps = 11/218 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--- 58
           L+KE  L++A  L  ++   G+ P+++T NT++ G C   +L +A+++F+ +    +   
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291

Query: 59  --------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
                   +P+  T+ ILI     EG+  +A  ++ +M  +G   + VTYS +I+G  K 
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             +  A  +++ M   + SPNIV+++ LI G CK G++++ L  F       ++ + +TY
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             LIRG+ K G    ++ ++  M+ +G+ PD + +  +
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 95/166 (57%), Gaps = 3/166 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD +TY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  +CK G +DD   +F +M  +G  AN +TY  LI G+ K  N+  + D+++
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALY---AFHCALDNHLL 164
           EM  + + P+ ++   ++ GL  +  ++ AL        ++D+HL+
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMDHHLV 478



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 93/172 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P+++T++ +I+  CK+ R+D+A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    N+VT++ LI GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
             K G +  +L  F   + + + PD +T   ++ G         A+ + + +
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 5/148 (3%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +F ILI  FC   ++  A   F K+ + G    +VT++ L+ G      +  A D++ +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C+    PN+V+++ L++GLC+ G + EA+      +++ L P+ +TY  ++ G CK G  
Sbjct: 77  CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 184 TEAMQLYDSMLR-NGIMPDGLLLSTLAD 210
             A+ L   M   + I PD ++ S + D
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIID 160



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +    P +V+++ L+ GLC    + EAL  F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P+ +   T+ D
Sbjct: 74  H----QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 125/209 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL L  Q+ +RG+  D +TYN++I G CS+ R  E  QL  K+    + P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILIDA CKEGR+ +A  + + M ++G K ++VTY+ L++GY   +N+  A +++ 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P++++Y++LIDG CK  +++EA+  F    + +L+P + +Y  LI G C +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R +   +L D M  +   PD +  + L D
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILID 413



 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 122/203 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L ++ L P I +YN++I G C+  R+    +L +++      P+ +T+ I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CKEGR+ +A  +   M++KG K N+VTY+ ++DGY    N+  A D++  M ++ 
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I++Y++LI+G CK  +++EA+  F      +L+PD+ +Y  LI G C  GR     
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L D M  +G  PD +  + L D
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLD 553



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   ++ RG +PDI+TYN ++ GYCS   + EA +LF ++    L+P+
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LID +CK   +D+A ++F ++  K     + +Y+ LIDG   S  +     + +
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++V+Y+ILID LCK G + EAL      +   + P++VTY  ++ GYC   
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  +++ M+++G+ PD
Sbjct: 455 NVNVAKDIFNRMVKSGLEPD 474



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++  H   A+ LF QL  +G+ P I T+  +I  Y   +    A  L   +     +PN
Sbjct: 65  IVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPN 124

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +I+ FC  G +  A      +L +G   +  TY  LI+G  K+  +K+A  + +
Sbjct: 125 LVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ 184

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM ++++ PN+V YS LIDGLCK G + +AL       +  +L D VTY  LI G C  G
Sbjct: 185 EMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVG 244

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E  QL   M+R  + PD    + L D
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILID 273



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 34/249 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  AL +   +  +G++P+I+TYN ++ GYC  N ++ A  +F ++    L+P+
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LI+ +CK   +D+A ++F +M  K    ++ +Y+ LIDG      +    ++ +
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL--------------YAFHCALDN------ 161
           EMC++  SP++++Y+IL+D  CK    ++A+              Y  H  +DN      
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594

Query: 162 ---------HLL-----PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                    HLL     P+V TY ILI   CK G   EAM L   M  N   PD +    
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 208 LADYNLQSS 216
           +    LQ +
Sbjct: 655 IIGVLLQRN 663



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 1/192 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  + L PDI +YN++I G C+L R+    +L +++      P+ IT+ I
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DAFCK    D A  +F +++E G   +  T   ++D   K + +K A D  + +  + 
Sbjct: 551 LLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+ +Y+ILI+ LCK G   EA+       DN   PD +T+ I+I    +     +A 
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 188 QLYDSMLRNGIM 199
           +L + M+  G++
Sbjct: 670 KLREEMIARGLV 681



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-------------------------- 38
           + H   A  L   +   G +P+++T+NTII G+C                          
Sbjct: 103 QSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFT 162

Query: 39  --------SLN-RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
                   S N ++  A+ L +++    ++PN + ++ LID  CK+G + DA  + S++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           E+G   + VTY+ LIDG       +    +  +M   N+ P+  +++ILID LCK G + 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA             PD+VTY  L+ GYC      EA +L++ M++ G+ PD L  + L 
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 210 D 210
           D
Sbjct: 343 D 343



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AAL L  ++    ++P+++ Y+ +I G C    + +A+ L  ++    +  +
Sbjct: 170 LSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLD 229

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LID  C  GR  + T + +KM+ +    +  T++ LID   K   +  A  V  
Sbjct: 230 AVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P+IV+Y+ L++G C R  + EA   F+  +   L PDV+ Y +LI GYCK  
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              EAM L+  +    ++P      T+A YN
Sbjct: 350 MVDEAMVLFKELCNKNLVP------TIASYN 374



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 86/173 (49%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C    +D+AV  F ++  V   P +  F  L+ A  + G    A  +F+++  KG   ++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            T++ LI+ YF   +   AF +   + ++   PN+V+++ +I+G C  G++ +AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L    L D  TY  LI G  K G+   A+ L   M ++ + P+ ++ S L D
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID 203


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL  FG+LT  G  P ++T+NT++ G C  +R+ EA+ LF ++     KPN +TFT 
Sbjct: 31  LPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC----KPNVVTFTT 86

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-N 126
           L++  C+EGR+ +A  +  +M+E G + N +TY  ++DG  K  +  SA ++  +M E +
Sbjct: 87  LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS 146

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +I P++V YS +IDGL K G   +A   F    D  + PD+VTY+ +I G+C +G+ +EA
Sbjct: 147 HIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEA 206

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   ML   I PD +  S L +
Sbjct: 207 QRLLQEMLVRKISPDVVTFSGLIN 230



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 47/248 (18%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ D+G+ PDI+TY+ +I G+CS  +  EA +L +++   ++ P+ +TF+
Sbjct: 168 HTDAQ-NLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-------- 118
            LI+A  KEG ++ A  +  +M+  G   NVVT + L+DG   S  +K A +        
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286

Query: 119 --------------------------------------VYEEMCENNISPNIVSYSILID 140
                                                 +YEEM    I P+ V+YS +I+
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLCK+  ++EA   F         P++VT+  LI GYCKAG   + ++L+  M R GI+ 
Sbjct: 347 GLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVA 406

Query: 201 DGLLLSTL 208
           + +   TL
Sbjct: 407 NAITYITL 414



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 47/256 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P+ ITY TI+ G C +     A+ L  K+  +  +KP
Sbjct: 91  LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY------------- 107
           + + ++ +ID   K+GR  DA  +F +M +KG   ++VTYSC+I+G+             
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 108 ----------------------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                                  K  ++ SA D+ +EM  + + PN+V+ + L+DGLC  
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 146 GLMEEALYAFHCALD-----------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           G +++AL  F                N + PDV TY ILI G    G+  EA +LY+ M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 195 RNGIMPDGLLLSTLAD 210
             GI+PD +  S++ +
Sbjct: 331 HRGIVPDTVTYSSMIN 346



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 118/218 (54%), Gaps = 11/218 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--- 58
           L+KE  L++A  L  ++   G+ P+++T NT++ G C   +L +A+++F+ +    +   
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291

Query: 59  --------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
                   +P+  T+ ILI     EG+  +A  ++ +M  +G   + VTYS +I+G  K 
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             +  A  +++ M   + SPNIV+++ LI G CK G++++ L  F       ++ + +TY
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             LIRG+ K G    ++ ++  M+ +G+ PD + +  +
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD +TY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  +CK G +DD   +F +M  +G  AN +TY  LI G+ K  N+  + D+++
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALY---AFHCALDNHLL 164
           EM  + + P+ ++   ++ GL  +  +++AL        ++D+HL+
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMDHHLV 478



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 94/172 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P+++T++ +I+  CK+ R+D+A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    N+VT++ LI GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
             K G +  +L  F   + + + PD +T   ++ G        +A+ + + +
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 5/148 (3%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +F ILI  FC   ++  A   F K+ + G    +VT++ L+ G      +  A D++ +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C+    PN+V+++ L++GLC+ G + EA+      +++ L P+ +TY  ++ G CK G  
Sbjct: 77  CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 184 TEAMQLYDSMLR-NGIMPDGLLLSTLAD 210
             A+ L   M   + I PD ++ S + D
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIID 160



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +    P +V+++ L+ GLC    + EAL  F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P+ +   T+ D
Sbjct: 74  H----QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 125/209 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL L  Q+ +RG+  D +TYN++I G CS+ R  E  QL  K+    + P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILIDA CKEGR+ +A  + + M ++G K ++VTY+ L++GY   +N+  A +++ 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P++++Y++LIDG CK  +++EA+  F    + +L+P + +Y  LI G C +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R +   +L D M  +   PD +  + L D
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILID 413



 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 122/203 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +L ++ L P I +YN++I G C+  R+    +L +++      P+ +T+ I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CKEGR+ +A  +   M++KG K N+VTY+ ++DGY    N+  A D++  M ++ 
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I++Y++LI+G CK  +++EA+  F      +L+PD+ +Y  LI G C  GR     
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L D M  +G  PD +  + L D
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLD 553



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 115/202 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   ++ RG +PDI+TYN ++ GYCS   + EA +LF ++    L+P+
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LID +CK   +D+A ++F ++  K     + +Y+ LIDG   S  +     + +
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++V+Y+ILID LCK G + EAL      +   + P++VTY  ++ GYC   
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
               A  +++ M+++G+ PD L
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDIL 476



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++  H   A+ LF QL  +G+ P I T+  +I  Y   +    A  L   +     +PN
Sbjct: 65  IVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPN 124

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +I+ FC  G +  A      +L +G   +  TY  LI+G  K+  +K+A  + +
Sbjct: 125 LVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ 184

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM ++++ PN+V YS LIDGLCK G + +AL       +  +L D VTY  LI G C  G
Sbjct: 185 EMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVG 244

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E  QL   M+R  + PD    + L D
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILID 273



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 34/249 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  AL +   +  +G++P+I+TYN ++ GYC  N ++ A  +F ++    L+P+
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LI+ +CK   +D+A ++F +M  K    ++ +Y+ LIDG      +    ++ +
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL--------------YAFHCALDN------ 161
           EMC++  SP++++Y+IL+D  CK    ++A+              Y  H  +DN      
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594

Query: 162 ---------HLL-----PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                    HLL     P+V TY ILI   CK G   EAM L   M  N   PD +    
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 208 LADYNLQSS 216
           +    LQ +
Sbjct: 655 IIGVLLQRN 663



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 13/216 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  + L PDI +YN++I G C+L R+    +L +++      P+ IT+ I
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DAFCK    D A  +F +++E G   +  T   ++D   K + +K A D  + +  + 
Sbjct: 551 LLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+ +Y+ILI+ LCK G   EA+       DN   PD +T+ I+I    +     +A 
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +L + M+  G++            N++ S +Q H +
Sbjct: 670 KLREEMIARGLV------------NIEKSLNQSHNV 693



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 35/241 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-------------------------- 38
           + H   A  L   +   G +P+++T+NTII G+C                          
Sbjct: 103 QSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFT 162

Query: 39  --------SLN-RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
                   S N ++  A+ L +++    ++PN + ++ LID  CK+G + DA  + S++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           E+G   + VTY+ LIDG       +    +  +M   N+ P+  +++ILID LCK G + 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA             PD+VTY  L+ GYC      EA +L++ M++ G+ PD L  + L 
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 210 D 210
           D
Sbjct: 343 D 343



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AAL L  ++    ++P+++ Y+ +I G C    + +A+ L  ++    +  +
Sbjct: 170 LSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLD 229

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LID  C  GR  + T + +KM+ +    +  T++ LID   K   +  A  V  
Sbjct: 230 AVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P+IV+Y+ L++G C R  + EA   F+  +   L PDV+ Y +LI GYCK  
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              EAM L+  +    ++P      T+A YN
Sbjct: 350 MVDEAMVLFKELCNKNLVP------TIASYN 374



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 86/173 (49%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C    +D+AV  F ++  V   P +  F  L+ A  + G    A  +F+++  KG   ++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            T++ LI+ YF   +   AF +   + ++   PN+V+++ +I+G C  G++ +AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L    L D  TY  LI G  K G+   A+ L   M ++ + P+ ++ S L D
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID 203


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE     A +L+ ++  RG+ P+ ITYN++I G+   NRLD A ++F  +      P+
Sbjct: 328 LVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPD 387

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF+ILID +C   R+DD   +  +M  +G  AN +TY+ LI G+ +  N+ +A D+ +
Sbjct: 388 VITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQ 447

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           EM  + + PN+V+ + L+DGLC  G +++AL  F         LD     N + PDV TY
Sbjct: 448 EMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY 507

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+ +EA +LY+ M   G++PD +  +++ D
Sbjct: 508 NILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVID 547



 Score =  139 bits (350), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A  LF ++ ++G+ P++ TYN +I G+CS  R  EA +L  ++   ++ P+
Sbjct: 258 LWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPD 317

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LI+A  KEG+  +A  ++++ML +G   N +TY+ +IDG+ K   + +A  ++ 
Sbjct: 318 VVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY 377

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     SP+++++SILIDG C    +++ +   H      L+ + +TY  LI G+C+ G
Sbjct: 378 LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLG 437

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A+ L   M+ +G+ P+ +  +TL D
Sbjct: 438 NLNAALDLLQEMISSGVCPNVVTCNTLLD 466



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P+ ITY TI+ G C +     A+ L  K+  V ++KP
Sbjct: 187 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKP 246

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID   K+GR  DA  +FS+M EKG   N+ TY+C+I+G+  S     A  + 
Sbjct: 247 NVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLL 306

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM E  +SP++V++S+LI+ L K G   EA   ++  L   ++P+ +TY  +I G+ K 
Sbjct: 307 REMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQ 366

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A +++  M   G  PD +  S L D
Sbjct: 367 NRLDAAERMFYLMATKGCSPDVITFSILID 396



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 13/214 (6%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  +KL  +++ RGL  + ITY T+I G+C L  L+ A+ L +++    + PN +T  
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCN 462

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP------------KANVVTYSCLIDGYFKSQNMK 114
            L+D  C  G++ DA  MF K+++K              + +V TY+ LI G        
Sbjct: 463 TLLDGLCNNGKLKDALEMF-KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS 521

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A ++YEEM    + P+ ++Y+ +IDGLCK+  ++EA   F         PDVVT+  LI
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            GYCK GR  + ++++  M R GI+ + +   TL
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 3/156 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RGL PD ITYN++I G C  +RLDEA Q+F+ +      P+
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+ D   +F +M  +G  AN +TY  LI G+ +  N+  A D+++
Sbjct: 574 VVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQ 633

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           EM  + + P+ ++   ++ GL  +   EE   A  C
Sbjct: 634 EMISSGVYPDTITIRNMLTGLWSK---EELKRAVQC 666



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 92/166 (55%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           +EPD+ TYN +ICG  +  +  EA +L+E++    L P++IT+  +ID  CK+ R+D+AT
Sbjct: 500 VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEAT 559

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            MF  M  KG   +VVT++ LI+GY K   +    +V+ EM    I  N ++Y  LI G 
Sbjct: 560 QMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           C+ G +  AL  F   + + + PD +T   ++ G         A+Q
Sbjct: 620 CQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 116/213 (54%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-------- 58
           +L+AAL L  ++   G+ P+++T NT++ G C+  +L +A+++F+ +   ++        
Sbjct: 438 NLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPF 497

Query: 59  ---KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
              +P+  T+ ILI     EG+  +A  ++ +M  +G   + +TY+ +IDG  K   +  
Sbjct: 498 NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDE 557

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  +++ M     SP++V+++ LI+G CK G + + L  F       ++ + +TY  LI 
Sbjct: 558 ATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIH 617

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G+C+ G    A+ ++  M+ +G+ PD + +  +
Sbjct: 618 GFCQVGNINGALDIFQEMISSGVYPDTITIRNM 650



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 6/213 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LFG +      P +I +  ++     + R D  + L  K+   ++  N  +FTI
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   ++VT+S L+ G      +  A   + ++C+  
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK-- 174

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+++++ L++GLC+ G + EA+      +++ L P+ +TY  ++ G CK G    A+
Sbjct: 175 --PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 188 QLYDSMLR-NGIMPDGLLLSTLADYNLQSSGSQ 219
            L   M   + I P+ ++ S + D  L   G Q
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIID-GLWKDGRQ 264



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 4/175 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  LD+A+ LF  +   +  P  I F  L+    +  R D    +  KM  +    
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           N+ +++ LI  +     +  A   + ++ +    P++V++S L+ GLC    + EAL+ F
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        P+V+ +  L+ G C+ GR  EA+ L D M+ +G+ P+ +   T+ D
Sbjct: 170 HQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 220


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + +A K    +   G+ P+I  YN +I GYC    L EA+ L  ++   ++ P+
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ILI   C   RM++A  +  +M +KG   N VTY+ LIDGY K  NM+ A +V  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I PNI+++S LIDG CK G ME A+  +   +   LLPDVV Y  LI G+ K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA +L+  M   G+ P+   LS L D
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLID 516



 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D   K++G +  RG  P+++TY T+I G C      +A +LF+++   ++ P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TILI   C E R+ +A  MF  M   G   N+ TY+ ++DGY K  ++K A ++Y 
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYX 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + PN+V++ ILIDGLCK   M  A           ++P++  Y  LI GYCKAG
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+ L+  + ++ I+PD    S L
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSIL 374



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +F  + + G+ P++ TYNT++ GYC +  + +A++L+ ++    L PN
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPN 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILID  CK   M  A      M   G   N+  Y+CLIDGY K+ N+  A  ++ 
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ ++ I P++ +YSILI GLC    MEEA            LP+ VTY  LI GYCK G
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+++   M   GI P+ +  STL D
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLID 446



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 114/187 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL L  ++    + PD+ TY+ +I G C ++R++EA  L +++      PN++
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID +CKEG M+ A  + S+M EKG + N++T+S LIDGY K+  M++A  +Y EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V+Y+ LIDG  K G  +EA        +  L P+V T + LI G CK GR 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 184 TEAMQLY 190
           ++A++L+
Sbjct: 525 SDAIKLF 531



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 48/251 (19%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  L  ++  +G  P+ +TYNT+I GYC    +++A+++  ++T   ++PN ITF+
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFS 442

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CK G+M+ A  ++++M+ KG   +VV Y+ LIDG+FK  N K AF +++EM E 
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502

Query: 127 NISPNI------------------------------------------------VSYSIL 138
            + PN+                                                V Y+ L
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTAL 562

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I GLC  G + +A   F     + L PDV T  ++I+G+ +A    + M L   +L+ GI
Sbjct: 563 IQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622

Query: 199 MPDGLLLSTLA 209
           +P+  +   LA
Sbjct: 623 IPNSSVYRVLA 633



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 5/201 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +   +  +L      P++  +  +I  +  +  ++EA+ ++ K+  +   P      +++
Sbjct: 111 SVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVL 165

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D   K+GR D    ++  M+ +G   NVVTY  LIDG  +  +   AF +++EM E  I 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V Y+ILI GLC    + EA   F    ++ +LP++ TY  ++ GYCK     +A++L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           Y  ML +G++P+ +    L D
Sbjct: 286 YXEMLGDGLLPNVVTFGILID 306



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P +   N ++ G     R D   +++  +      PN +T+  LID  C++G    A  +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M+EK     VV Y+ LI G      +  A  ++  M  + + PN+ +Y+ ++DG CK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              +++AL  +   L + LLP+VVT+ ILI G CK      A +    M   G++P+  +
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 205 LSTLAD 210
            + L D
Sbjct: 336 YNCLID 341



 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 13/162 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL----- 58
           K+ +   A +L  ++ + GL P++ T + +I G C   R+ +A++LF   T         
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT 544

Query: 59  --------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
                    PN + +T LI   C +GR+  A+  FS M   G + +V T   +I G+F++
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            +++    +  ++ +  I PN   Y +L  G  + G ++ AL
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL 646



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 24/217 (11%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL+LF Q+     +PDI+T    +     L  LD    +   +    L  +      L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN- 127
           I+ + K G +  A  +F    +   K +V T++ +I G+      + A  ++ EM E N 
Sbjct: 791 INMYSKCGEIGTARRLF----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 128 ---------------ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYA 171
                          + PN V++  ++      GL+EE    F    +++ L P +  + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            ++   C+AG  TEA   Y+ +L+  + P+ ++  TL
Sbjct: 907 CMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTL 940


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 11/215 (5%)

Query: 5   ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAV----------QLFEKL 53
           +CH L  +L  FG+LT  G +PD++T+NT++ G C  +R+ EA+           LF+++
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQM 212

Query: 54  TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
             + L P  ITF  LI+  C EGR+ +A  + +KM+ KG   +VVTY  +++G  K  + 
Sbjct: 213 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 272

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           KSA ++  +M E +I P++V YS +ID LCK G   +A Y F   L+  + P+V TY  +
Sbjct: 273 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 332

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           I G+C  GR ++A +L   M+   I PD L  + L
Sbjct: 333 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 367



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +GL  D++TY TI+ G C +     A+ L  K+    +KP+ + ++ +ID
Sbjct: 240 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 299

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G   DA  +FS+MLEKG   NV TY+C+IDG+        A  +  +M E  I+P
Sbjct: 300 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 359

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++++ LI    K G + EA       L   + PD VTY  +I G+CK  R  +A  ++
Sbjct: 360 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 419

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M      PD +  +T+ D
Sbjct: 420 DLMAS----PDVVTFNTIID 435



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 103/195 (52%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF Q+ + GL P +IT+NT+I G C   R+ EA  L  K+    L  + +T+  +++  C
Sbjct: 208 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 267

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G    A  + SKM E   K +VV YS +ID   K  +   A  ++ EM E  I+PN+ 
Sbjct: 268 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 327

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +IDG C  G   +A       ++  + PDV+T+  LI    K G+  EA +L D M
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387

Query: 194 LRNGIMPDGLLLSTL 208
           L   I PD +  +++
Sbjct: 388 LHRCIFPDTVTYNSM 402



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 111/203 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  +++ RGL  +  TYNT+I G+C ++ L+ A  LF+++    + P++IT  I
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  FC+  ++++A  +F  +       + V Y+ +I G  K   +  A+D++  +  + 
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+++I G C +  + +A   FH   DN   PD  TY  LIRG  KAG   +++
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 622

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  NG   D   +  +AD
Sbjct: 623 ELISEMRSNGFSGDAFTIKMVAD 645



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 6/206 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D A  +F    D    PD++T+NTII  YC   R+DE +QL  +++   L  N+ 
Sbjct: 408 KHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FC+   ++ A  +F +M+  G   + +T + L+ G+ +++ ++ A +++E +
Sbjct: 464 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 523

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
             + I  + V+Y+I+I G+CK   ++EA   F C+L  H + PDV TY ++I G+C    
Sbjct: 524 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSA 582

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            ++A  L+  M  NG  PD    +TL
Sbjct: 583 ISDANVLFHKMKDNGHEPDNSTYNTL 608



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 72/282 (25%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ ++G+ P++ TYN +I G+CS  R  +A +L   +   ++ P+
Sbjct: 301 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360

Query: 62  SITFTILIDA-----------------------------------FCKEGRMDDATMMFS 86
            +TF  LI A                                   FCK  R DDA  MF 
Sbjct: 361 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 420

Query: 87  KML-------------------------------EKGPKANVVTYSCLIDGYFKSQNMKS 115
            M                                 +G  AN  TY+ LI G+ +  N+ +
Sbjct: 421 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 480

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+++EM  + + P+ ++ +IL+ G C+   +EEAL  F     + +  D V Y I+I 
Sbjct: 481 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 540

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G CK  +  EA  L+ S+  +G+ PD      +  YN+  SG
Sbjct: 541 GMCKGSKVDEAWDLFCSLPIHGVEPD------VQTYNVMISG 576



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 4/199 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL L  ++ +  ++PD++ Y+ II   C      +A  LF ++    + PN  T+  +I
Sbjct: 274 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 333

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D FC  GR  DA  +   M+E+    +V+T++ LI    K   +  A  + +EM    I 
Sbjct: 334 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 393

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ V+Y+ +I G CK    ++A + F    D    PDVVT+  +I  YC+A R  E MQL
Sbjct: 394 PDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQL 449

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              + R G++ +    +TL
Sbjct: 450 LREISRRGLVANTTTYNTL 468



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 10/213 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+  F  +         +  N +I  +  +NR D A+ L+ K+   ++  N  +F I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---------- 117
           LI  FC   ++  +   F K+ + G + +VVT++ L+ G      +  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++++M E  ++P +++++ LI+GLC  G + EA    +  +   L  DVVTY  ++ G 
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK G    A+ L   M    I PD ++ S + D
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 299



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 85/146 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+AA  LF ++   G+ PD IT N ++ G+C   +L+EA++LFE +   ++  +++ + 
Sbjct: 477 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 536

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I   CK  ++D+A  +F  +   G + +V TY+ +I G+     +  A  ++ +M +N
Sbjct: 537 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 596

Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL 152
              P+  +Y+ LI G  K G +++++
Sbjct: 597 GHEPDNSTYNTLIRGCLKAGEIDKSI 622



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF  L   G+EPD+ TYN +I G+C  + + +A  LF K+     +P++ 
Sbjct: 544 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 603

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           T+  LI    K G +D +  + S+M   G   +  T   + D
Sbjct: 604 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K  ++  A  +  ++  RGL+P++ T+ T+I G C +   + A +LF KL      KP
Sbjct: 153 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 212

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T++I  +C+EG++  A M+  +M+E+G K N  TY+ LI G+ K  +   AF++ 
Sbjct: 213 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 272

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +    PNI +Y+ +IDG CK+G ++EA      A    L  D +TY ILI  +CK 
Sbjct: 273 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 332

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G  T A+ L+D M+ NG  PD
Sbjct: 333 GHITYALDLFDRMVENGCCPD 353



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A  L  ++ ++GL+P+  TY T+I G+C     D A +L  K+      PN  
Sbjct: 226 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 285

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID FCK+G++ +A  +      +G K + +TY+ LI  + K  ++  A D+++ M
Sbjct: 286 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 345

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN   P+I +Y+ LI   C++  MEE+   F   L   LLP   TY  +I GYCK GR 
Sbjct: 346 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 405

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T A+++++ M++NG   D +    L
Sbjct: 406 TLALRVFERMVQNGCFADSITYGAL 430



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T  G+ P    +  ++   C   +++E   L   +       ++ T T+++ 
Sbjct: 57  ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C++GR  D +  F +MLE G   NVV Y+  IDG  K + +K AF V EEM    + P
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176

Query: 131 NIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+ +++ LIDGLCK G  E A   F      +   P+V TY ++I GYC+ G+   A  L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              M+  G+ P+    +TL
Sbjct: 237 LVRMVEQGLKPNTNTYTTL 255



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 99/193 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++   G  P+I TYN +I G+C   ++ EA ++    T   LK + IT+TI
Sbjct: 265 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 324

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK+G +  A  +F +M+E G   ++  Y+ LI  Y + + M+ +   +++     
Sbjct: 325 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 384

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P   +Y+ +I G CK G    AL  F   + N    D +TY  LI G CK  R  EA 
Sbjct: 385 LLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAK 444

Query: 188 QLYDSMLRNGIMP 200
            LY+ ML   ++P
Sbjct: 445 ALYEGMLDKRLVP 457



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 1/197 (0%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           + F ++ + G  P+++ Y   I G C    + +A  + E++    LKPN  T T LID  
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 73  CKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           CK G  + A  +F K+++    K NV TY+ +I GY +   +  A  +   M E  + PN
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +Y+ LI G CK G  + A    +       LP++ TY  +I G+CK G+  EA ++  
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 192 SMLRNGIMPDGLLLSTL 208
                G+  D +  + L
Sbjct: 309 MATSQGLKFDKITYTIL 325



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++ AF + GR+ +A  M  +M   G    V T + ++    ++ +   A  V++ M    
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 128 ISPNIVSYSILIDGLCKRGLMEE------ALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +SP    +  L+   C+ G +EE      A++ +  +LDN       T  +++R  C+ G
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDN------ATCTVVVRSLCEKG 122

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +  + +  ML  G  P+
Sbjct: 123 RFKDVSEFFRRMLETGTPPN 142



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 65/165 (39%), Gaps = 35/165 (21%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           A ++F+ +T   + P +  F  L+   C+EG++++   + + M   G             
Sbjct: 57  ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYG------------- 103

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
                      F +    C           ++++  LC++G  ++    F   L+    P
Sbjct: 104 -----------FSLDNATC-----------TVVVRSLCEKGRFKDVSEFFRRMLETGTPP 141

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +VV Y   I G CK     +A  + + M+  G+ P+    +TL D
Sbjct: 142 NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 186


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++ D G +P+++TY +++ G C + +L EAV LF ++      P+ + + +
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F K+G M +A  +F +MLEKG    V TY+ L+ G+ +         ++++M    
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PNI +++ L+DG CK G M EA   F         PDVV+Y  L+RG C  G+P EA 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +L   M+R+G+ PD +  + L D     SG+ +H I
Sbjct: 283 RLLREMIRSGVGPDIVSYNILID-GYSKSGALDHAI 317



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K    D     +  +   G  P+  TY  ++   C   R +EA  +F  +      P
Sbjct: 26  VLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSP 85

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  +++ILI   C+  ++D+A  + ++M++ G + NVVTY  L+ G  K   +K A D++
Sbjct: 86  NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLF 145

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M      P+ V Y++LIDG  K+G M EA   F   L+   +P V TY  L+ G+ + 
Sbjct: 146 SRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRK 205

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G       L+  MLR G +P+    + L D
Sbjct: 206 GEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +LF ++ ++G  P + TYN+++ G+           LF+ +      PN  
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+D FCK G M +A  +F +M   G   +VV+Y+ L+ G         A  +  EM
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+IVSY+ILIDG  K G ++ A+  F+    + L PD  +Y+ +I   C+AG+ 
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  ++  M+ NG  PD  ++  L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPL 373



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 108/200 (54%), Gaps = 6/200 (3%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  +  +G  P+I T+N ++ G+C +  + EA +LF ++  +   P+ +++  L+   C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            +G+  +A  +  +M+  G   ++V+Y+ LIDGY KS  +  A  ++ E+ ++ + P+  
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           SYS +ID LC+ G +  A   F   + N   PD      L+ G C+  R TE+ +L+ +M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393

Query: 194 LRNGIMPDGLLLSTLADYNL 213
           ++   +P       + +YNL
Sbjct: 394 VKFECVP------LIPEYNL 407



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 102/191 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++   G  PD+++YNT++ G CS  +  EA +L  ++    + P+ +++ ILID
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G +D A  +F ++ + G + +  +YS +ID   ++  + +AF V+++M  N  +P
Sbjct: 306 GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +      L+ GLC+   + E+   F   +    +P +  Y +L+   CKA R  +  +++
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIF 425

Query: 191 DSMLRNGIMPD 201
             +   G  PD
Sbjct: 426 HELTERGFSPD 436



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 6/190 (3%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++YN ++       R D     +  +      PN+ T+  L+ + C+  R ++A  +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G   NV +YS LI G  + Q +  A ++  EM +    PN+V+Y  L+ GLCK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++EA+  F   +     PD V Y +LI G+ K G   EA +L++ ML  G +P      T
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP------T 191

Query: 208 LADYNLQSSG 217
           +  YN   SG
Sbjct: 192 VFTYNSLLSG 201



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 80/155 (51%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           V     ++++  L++   K GR D     ++ ML  G   N  TY  L+    ++Q  + 
Sbjct: 11  VHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  V+  M     SPN+ SYSILI GLC+   ++EA    +  +D    P+VVTY  L+ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G CK G+  EA+ L+  M+  G  PDG++ + L D
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 85/164 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   G+ PDI++YN +I GY     LD A++LF ++    L+P++ +++ +ID
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ G++  A ++F  M+  G   +      L+ G  + + +  + ++++ M +    P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            I  Y++L+  LCK    ++    FH   +    PDV    +++
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 68/139 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+KLF ++   GLEPD  +Y+TII   C   ++  A  +F+ +      P++ 
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
               L+   C+  R+ ++  +F  M++      +  Y+ L+    K++      +++ E+
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL 428

Query: 124 CENNISPNIVSYSILIDGL 142
            E   SP++    ++++ L
Sbjct: 429 TERGFSPDVEISKVILETL 447


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 122/210 (58%), Gaps = 3/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE        ++ ++  R + P++IT+NT+I G C + +L++A  + + +      PN
Sbjct: 205 LVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPN 264

Query: 62  SITFTILIDAFCKEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +T+  LID +CK GR   M  A  +  +M+E     N VT++ LIDG+ K +N+ +A  
Sbjct: 265 VVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALK 324

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+EEM    + P +V+Y+ L++GLC  G + EA       L ++L P+V+TY  LI GYC
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           K     EA +L+D++ + G+ P+ +  +TL
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTL 414



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 121/207 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L AALK+F ++  +GL+P ++TYN+++ G C+  +L+EA  L +++    LKPN I
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK+  +++A  +F  + ++G   NV+T++ L+ GY K   M+ AF + + M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    PN  +Y+ LI G C+ G MEE     +      +  D VTY ILI  +C+   P
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A +L D ML  G+ P  L  + L +
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLN 521



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 117/204 (57%), Gaps = 3/204 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDE---AVQLFEKLTCVQL 58
           L K   L+ A  +   +   G  P+++TYNT+I GYC + R+ +   A  + +++   ++
Sbjct: 240 LCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKV 299

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PNS+TF +LID FCK+  +  A  +F +M  +G K  VVTY+ L++G      +  A  
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + +EM  +N+ PN+++Y+ LI+G CK+ L+EEA   F       L P+V+T+  L+ GYC
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYC 419

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDG 202
           K G+  EA  L   ML  G +P+ 
Sbjct: 420 KFGKMEEAFLLQKVMLEKGFLPNA 443



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK   ++ +  + P+ +T+N +I G+C    L  A+++FE++    LKP  +T+  L
Sbjct: 288 DAILK---EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++  C EG++++A ++  +ML    K NV+TY+ LI+GY K + ++ A ++++ + +  +
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +PN+++++ L+ G CK G MEEA       L+   LP+  TY  LI G+C+ G+  E   
Sbjct: 405 TPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L + M   G+  D +  + L
Sbjct: 465 LLNEMQCRGVKADTVTYNIL 484



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 106/196 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L+ A  L  ++    L+P++ITYN +I GYC    L+EA +LF+ +    L PN
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  L+  +CK G+M++A ++   MLEKG   N  TY+CLI G+ +   M+   ++  
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  + V+Y+ILI   C++   ++A       LD  L P  +TY IL+ GYC  G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 182 RPTEAMQLYDSMLRNG 197
               A+ L   M + G
Sbjct: 528 NLRAALNLRKQMEKEG 543



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            L+ F +  D   +  +++ N ++      N       +++++   ++ PN ITF  +I+
Sbjct: 179 GLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVIN 238

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK---SQNMKSAFDVYEEMCENN 127
             CK G+++ A  +   M   G   NVVTY+ LIDGY K      M  A  + +EM EN 
Sbjct: 239 GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK 298

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SPN V++++LIDG CK   +  AL  F       L P VVTY  L+ G C  G+  EA 
Sbjct: 299 VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAK 358

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L D ML + + P+ +  + L +
Sbjct: 359 VLLDEMLSSNLKPNVITYNALIN 381



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 107/194 (55%), Gaps = 16/194 (8%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L   + ++G  P+  TYN +I G+C   +++E   L  ++ C  +K +++T+ I
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A+C++     A  +  +ML+KG K + +TY+ L++GY    N+++A ++ ++M +  
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N+V+Y++LI G C++G +E+A    +  L+  L+P+  TY I               
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEI--------------- 588

Query: 188 QLYDSMLRNGIMPD 201
            + + M+  G +PD
Sbjct: 589 -IKEEMMEKGFLPD 601



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 83/147 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++    L  ++  RG++ D +TYN +I  +C      +A +L +++    LKP+ +
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL++ +C EG +  A  +  +M ++G  ANVVTY+ LI GY +   ++ A  +  EM
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEE 150
            E  + PN  +Y I+ + + ++G + +
Sbjct: 575 LEKGLIPNRTTYEIIKEEMMEKGFLPD 601



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 95/186 (51%), Gaps = 3/186 (1%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I  + ++  Y   ++    ++ F++    + K + ++   L+ A  KE        ++ +
Sbjct: 161 IIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKE 220

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+ +    N++T++ +I+G  K   +  A DV ++M      PN+V+Y+ LIDG CK G 
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 148 ---MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              M +A       ++N + P+ VT+ +LI G+CK    + A+++++ M   G+ P  + 
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 205 LSTLAD 210
            ++L +
Sbjct: 341 YNSLVN 346



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 3/157 (1%)

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           Q   NSI   +L+ A+ +  +       F +  +   K +V++ + L+    K       
Sbjct: 155 QFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGV 214

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             VY+EM    ISPN+++++ +I+GLCK G + +A             P+VVTY  LI G
Sbjct: 215 EFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG 274

Query: 177 YCKAGRPT---EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           YCK GR     +A  +   M+ N + P+ +  + L D
Sbjct: 275 YCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + +A K    +   G+ P+I  YN +I GYC    L EA+ L  ++   ++ P+
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ILI   C   RM++A  +  +M +KG   N VTY+ LIDGY K  NM+ A +V  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I PNI+++S LIDG CK G ME A+  +   +   LLPDVV Y  LI G+ K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA +L+  M   G+ P+   LS L D
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLID 516



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D   K++G +  RG  P+++TY T+I G C      +A +LF+++   ++ P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TILI   C E R+ +A  MF  M   G   N+ TY+ ++DGY K  ++K A ++Y+
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + PN+V++ ILIDGLCK   M  A           ++P++  Y  LI GYCKAG
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+ L+  + ++ I+PD    S L
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSIL 374



 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +F  + + G+ P++ TYNT++ GYC +  + +A++L++++    L PN
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILID  CK   M  A      M   G   N+  Y+CLIDGY K+ N+  A  ++ 
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ ++ I P++ +YSILI GLC    MEEA            LP+ VTY  LI GYCK G
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+++   M   GI P+ +  STL D
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLID 446



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 114/187 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL L  ++    + PD+ TY+ +I G C ++R++EA  L +++      PN++
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID +CKEG M+ A  + S+M EKG + N++T+S LIDGY K+  M++A  +Y EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V+Y+ LIDG  K G  +EA        +  L P+V T + LI G CK GR 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 184 TEAMQLY 190
           ++A++L+
Sbjct: 525 SDAIKLF 531



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 48/251 (19%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  L  ++  +G  P+ +TYNT+I GYC    +++A+++  ++T   ++PN ITF+
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFS 442

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CK G+M+ A  ++++M+ KG   +VV Y+ LIDG+FK  N K AF +++EM E 
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502

Query: 127 NISPNI------------------------------------------------VSYSIL 138
            + PN+                                                V Y+ L
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTAL 562

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I GLC  G + +A   F     + L PDV T  ++I+G+ +A    + M L   +L+ GI
Sbjct: 563 IQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622

Query: 199 MPDGLLLSTLA 209
           +P+  +   LA
Sbjct: 623 IPNSSVYRVLA 633



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 5/201 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +   +  +L      P++  +  +I  +  +  ++EA+ ++ K+  +   P      +++
Sbjct: 111 SVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVL 165

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D   K+GR D    ++  M+ +G   NVVTY  LIDG  +  +   AF +++EM E  I 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V Y+ILI GLC    + EA   F    ++ +LP++ TY  ++ GYCK     +A++L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           Y  ML +G++P+ +    L D
Sbjct: 286 YQEMLGDGLLPNVVTFGILID 306



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P +   N ++ G     R D   +++  +      PN +T+  LID  C++G    A  +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M+EK     VV Y+ LI G      +  A  ++  M  + + PN+ +Y+ ++DG CK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              +++AL  +   L + LLP+VVT+ ILI G CK      A +    M   G++P+  +
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 205 LSTLAD 210
            + L D
Sbjct: 336 YNCLID 341



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 13/162 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL----- 58
           K+ +   A +L  ++ + GL P++ T + +I G C   R+ +A++LF   T         
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT 544

Query: 59  --------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
                    PN + +T LI   C +GR+  A+  FS M   G + +V T   +I G+F++
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            +++    +  ++ +  I PN   Y +L  G  + G ++ AL
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL 646



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 13/135 (9%)

Query: 2   LIKECHLDAALKLFGQLT------------DRGL-EPDIITYNTIICGYCSLNRLDEAVQ 48
           L K+  +  A+KLF   T            DR L  P+ + Y  +I G C+  R+ +A +
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASK 577

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            F  + C  L+P+  T  ++I    +   + D  M+ + +L+ G   N   Y  L  GY 
Sbjct: 578 FFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYE 637

Query: 109 KSQNMKSAFDVYEEM 123
           +S  +KSA    E++
Sbjct: 638 ESGYLKSALRCSEDL 652


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 115/181 (63%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+  L  A KL+ ++  R ++P+I TY+++I G+C L+RL EA Q+ E +      PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK  R+D    +F +M ++G   N VTY+ LI G+F++++  +A  V++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PNI++Y+IL+DGLCK G + +A+  F     + + PD+ TY I+I G CKAG
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512

Query: 182 R 182
           +
Sbjct: 513 K 513



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL L  ++    +E +++ Y+T+I   C     D+A+ LF ++    ++PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ LI   C  GR  DA+ + S M+E+    N+VT+S LID + K   +  A  +YE
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I PNI +YS LI+G C    + EA       +    LP+VVTY  LI G+CKA 
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  + M+L+  M + G++ + +  +TL
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTL 434



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 117/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H D AL LF ++ ++G+ P++ITY+++I   C+  R  +A +L   +   ++ PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LIDAF K+G++  A  ++ +M+++    N+ TYS LI+G+     +  A  + E
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  PN+V+Y+ LI+G CK   +++ +  F       L+ + VTY  LI G+ +A 
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  ++  M+  G+ P+ L  + L D
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLD 471



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 110/195 (56%)

Query: 16  GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
           G++   G EPDI+T N+++ G+C  NR+ +AV L +++  +  KP+++TFT LI      
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
            +  +A  +  +M+++G + ++VTY  +++G  K  +   A ++  +M    I  N+V Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           S +ID LCK    ++AL  F    +  + P+V+TY+ LI   C  GR ++A +L   M+ 
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316

Query: 196 NGIMPDGLLLSTLAD 210
             I P+ +  S L D
Sbjct: 317 RKINPNLVTFSALID 331



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 113/208 (54%), Gaps = 3/208 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD +T+ T+I G    N+  EAV L +++     +P+ 
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +++  CK G  D A  + +KM     +ANVV YS +ID   K ++   A +++ E
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN+++YS LI  LC  G   +A       ++  + P++VT++ LI  + K G+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A +LY+ M++  I P+    S+L +
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLIN 366



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 39/256 (15%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + +  LD A+ LFG +      P II ++ ++     +N+ D  +   EK+  + +  N 
Sbjct: 54  LSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113

Query: 63  ITFTILIDAFCK-----------------------------------EGRMDDATMMFSK 87
            T+ ILI+ FC+                                     R+ DA  +  +
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+E G K + VT++ LI G F       A  + + M +    P++V+Y  +++GLCKRG 
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL---- 203
            + AL   +      +  +VV Y+ +I   CK     +A+ L+  M   G+ P+ +    
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293

Query: 204 LLSTLADYNLQSSGSQ 219
           L+S L +Y   S  S+
Sbjct: 294 LISCLCNYGRWSDASR 309



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 63/111 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ RGL  + +TY T+I G+      D A  +F+++  V + PN +
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           T+ IL+D  CK G++  A ++F  +     + ++ TY+ +I+G  K+   K
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 117/187 (62%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++  + + P+++T+N++I G+C + +L EAV L  +++   + PN  TF ILID
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEG +  AT + S M+++G + NVVTY+ L+DGYF  + +  A  V+  +    ++P
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ SYS++I+GLCK  +++EA+  F      ++ P+ VTY+ LI G CK+GR ++   L 
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392

Query: 191 DSMLRNG 197
           D +   G
Sbjct: 393 DEINNRG 399



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 120/207 (57%), Gaps = 2/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  ++ RG+ P++ +Y+ +I G C    +DEAV+LF+++    + PN
Sbjct: 311 LVKE--VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T++ LID  CK GR+ D   +  ++  +G  AN++TY+ L++G  K+  +  A  +  
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I P++ +Y+ L+DGLCK G +++A   +   L      ++  Y ++I G CK G
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA+ L   M  NG MPD +   TL
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETL 515



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 110/196 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  +G+EP+++TY +++ GY  +  +++A  +F  ++   + PN
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +++++I+  CK   +D+A  +F +M  K    N VTYS LIDG  KS  +   +D+ +
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+       NI++Y+ L++GLCK   +++A+       D  + PD+ TY  L+ G CK G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A ++Y  +L  G
Sbjct: 454 RLKDAQRIYQDLLCKG 469



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K     AAL+L  ++    L  PD+I Y  II  +C    + +A  L+ ++   ++ P
Sbjct: 168 LCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYP 227

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +TF  LI  FC  G++ +A  + ++M       NV T++ LIDG  K   +K A  V 
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +  + PN+V+Y+ L+DG      + +A + F+      + P+V +Y+++I G CK 
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               EA++L+  M    + P+ +  S+L D
Sbjct: 348 KMVDEAVKLFKEMHLKNMTPNTVTYSSLID 377



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 36/245 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A+    Q+  +G++P++ T+N +I  +  L +L+ A  +  K+  +  +P+
Sbjct: 63  LVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPD 122

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------ 115
           ++T   L+   C  G++ +A      ++ K    + V+Y  LI+G  KS   ++      
Sbjct: 123 TVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLR 182

Query: 116 ------------------------------AFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                                         A+D+Y EM    I PN+V+++ LI G C  
Sbjct: 183 KIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIV 242

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++EA+   +    N++ P+V T+ ILI G CK G   +A  +   M++ G+ P+ +  
Sbjct: 243 GQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTY 302

Query: 206 STLAD 210
           ++L D
Sbjct: 303 TSLMD 307



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 4/205 (1%)

Query: 7   HLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           +LD A+  F  +       P I  +N I+     +N    A+   +++    ++P   TF
Sbjct: 32  NLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTF 91

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            ILI+ F    +++ A  M +K+L+ G + + VT + L+ G   +  +K A + ++ +  
Sbjct: 92  NILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIR 151

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILIRGYCKAGRP 183
                + VSY  LI+GLCK G    AL      ++  LL  PDV+ Y  +I  +CK    
Sbjct: 152 KRFHLDQVSYGTLINGLCKSGETRAALQLLR-KIEGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  LY  M+   I P+ +  ++L
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSL 235



 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 35/125 (28%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------ 55
           L K   +D A+ L  ++ D G++PD+ TY T++ G C   RL +A ++++ L C      
Sbjct: 414 LCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLN 473

Query: 56  ------------------------VQLK-----PNSITFTILIDAFCKEGRMDDATMMFS 86
                                    Q++     P+++T+  LI A  K  +   A  +  
Sbjct: 474 IRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLR 533

Query: 87  KMLEK 91
           +M+ +
Sbjct: 534 EMIAR 538


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 120/200 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++T +G+  D++TY+T+I G+C   +L EA+ L  ++    + PN  T+ IL+D
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG++ +A  + + ML+   K +V+TYS L+DGYF    +K A  V+  M    ++P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ILI+G CK  +++EAL  F      +++P +VTY+ LI G CK+GR      L 
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G   + +  S+L D
Sbjct: 398 DEMHDRGQPANVITYSSLID 417



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 113/196 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A  +F  ++  G+ PD+ TY  +I G+C    +DEA+ LF+++    + P  +T++ 
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+     +  +M ++G  ANV+TYS LIDG  K+ ++  A  ++ +M +  
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN  +++IL+DGLCK G +++A   F   L      +V TY ++I G+CK G   EA+
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499

Query: 188 QLYDSMLRNGIMPDGL 203
            +   M  NG +PD +
Sbjct: 500 TMLSKMEDNGCIPDAV 515



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 114/196 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +    ++PD+ITY+T++ GY  +  + +A  +F  ++ + + P+
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILI+ FCK   +D+A  +F +M +K     +VTYS LIDG  KS  +   +D+ +
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +     N+++YS LIDGLCK G ++ A+  F+   D  + P+  T+ IL+ G CK G
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 458

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A +++  +L  G
Sbjct: 459 RLKDAQEVFQDLLTKG 474



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 108/195 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L  +G + + ++Y T+I G C +     A++L +K+     KPN + ++
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYS 203

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  A+VVTYS LI G+     +K A  +  EM   
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+ +Y+IL+D LCK G ++EA       L   + PDV+TY+ L+ GY       +A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 187 MQLYDSMLRNGIMPD 201
             ++++M   G+ PD
Sbjct: 324 QHVFNAMSLMGVTPD 338



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 99/167 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++  + + P I+TY+++I G C   R+     L +++       N IT++ 
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A  +F+KM ++G + N  T++ L+DG  K   +K A +V++++    
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
              N+ +Y+++IDG CK+GL+EEAL       DN  +PD VT+ I+I
Sbjct: 475 YHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH+        +  ++  RG  PD +T NT+I G C   ++ +A+   +KL     + N 
Sbjct: 105 CHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  LI+  CK G    A  +  K+  +  K NVV YS +ID   K Q +  A+ ++ E
Sbjct: 165 VSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    IS ++V+YS LI G C  G ++EA+   +  +   + P+V TY IL+   CK G+
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  +   ML+  + PD +  STL D
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMD 312



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 106/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L  +L  +G++PD+IT N +I  +C + ++     +  K+      P+++T  
Sbjct: 74  HYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLN 133

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C +G++  A     K+L +G + N V+Y  LI+G  K  + ++A  + +++   
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGR 193

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V YS +ID LCK  L+ EA   F       +  DVVTY+ LI G+C  G+  EA
Sbjct: 194 LTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEA 253

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M+   I P+    + L D
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVD 277



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 107/204 (52%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            H   A+ L  +L  +G++PD+ T N +I  +C + ++     +  K+      P++ITFT
Sbjct: 941  HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFT 1000

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             LI+  C +G+++ A     K+L +G + N V+Y  LI+G  K  + ++A  +  ++   
Sbjct: 1001 TLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR 1060

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               P++V Y+ +ID LCK  L+ +A   F       +  DVVTY  LI G+C  G+  EA
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEA 1120

Query: 187  MQLYDSMLRNGIMPDGLLLSTLAD 210
            + L + M+   I P+    + L D
Sbjct: 1121 IGLLNKMVLKTINPNVRTYNILVD 1144



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 83/144 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +     L  ++ DRG   ++ITY+++I G C    LD A+ LF K+    ++PN
Sbjct: 384 LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TFTIL+D  CK GR+ DA  +F  +L KG   NV TY+ +IDG+ K   ++ A  +  
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLS 503

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M +N   P+ V++ I+I  L K+
Sbjct: 504 KMEDNGCIPDAVTFEIIIIALFKK 527



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 5/197 (2%)

Query: 6    CHLDAA---LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            CH+        +  ++  RG  PD IT+ T+I G C   ++++A+   +KL     + N 
Sbjct: 972  CHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQ 1031

Query: 63   ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +++  LI+  CK G    A  +  K+  +  K +VV Y+ +ID   K Q +  A+ ++ E
Sbjct: 1032 VSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFE 1091

Query: 123  MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            M    IS ++V+Y+ LI G C  G ++EA+   +  +   + P+V TY IL+   CK G+
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151

Query: 183  P--TEAMQLYDSMLRNG 197
                E++ +   M  NG
Sbjct: 1152 DLLDESLSMLSKMEDNG 1168



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 2/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A+  F ++      P II +N I+  +  +     AV L  +L    ++P+ IT  
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+ FC  G++     + +K+L++G   + VT + LI G      +K A   ++++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTE 185
               N VSY  LI+G+CK G    A+      +D  L  P+VV Y+ +I   CK    +E
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQ-KIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  L+  M   GI  D +  STL
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTL 240



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 2/124 (1%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   +  A  LF ++  +G+  D++TYNT+I G+C + +L EA+ L  K+    + PN
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 62   SITFTILIDAFCKEGR--MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
              T+ IL+DA CKEG+  +D++  M SKM + G KAN VT+  +I   F+         +
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 120  YEEM 123
              EM
Sbjct: 1196 LHEM 1199



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 86/172 (50%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           S+  +D+AV  F ++ C++  P  I F  ++D+F K      A  +  ++  KG + +++
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + LI+ +     +   F V  ++ +    P+ V+ + LI GLC +G +++AL+     
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L      + V+Y  LI G CK G    A++L   +      P+ ++ ST+ D
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 116/202 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A +L  ++TD G  PD++TY+T+I G CS+ R+D+A  L E +   Q KP  +T   
Sbjct: 488 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 547

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK GR+ +A  +   M+  G   +VVTY+ L+ G+ ++   + A ++  +M    
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 607

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN+V+Y+ L+ GLCK   + EA   F     +   P++ TY  LI G+C AG+    +
Sbjct: 608 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 667

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
           +L+  M+  GI PD ++  TLA
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLA 689



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 118/209 (56%), Gaps = 12/209 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPD---------IITYNTIICGYCSLNRLDEAVQLFEK 52
           L K   ++ A++LFG   DR L            +  YN +I G C  +R+DEAVQ+FEK
Sbjct: 257 LCKAGRVEEAVRLFG---DRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEK 313

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
           +    + P+S ++ ILID   K G+++DA  +F K+L  G   + V Y+ LI G   + +
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
              A +++ +M      P+ V+Y+++ID  CKRG++EEA       +++  +PDVVTY  
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++ G CK+ R  EA+ L++ M R G  P+
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPN 462



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 9/228 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A  L  ++ + G  PD++TYNT++ G C  +R++EA+ LF ++  +   PN  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 64  TFTILI---------DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           +   +I         D  C+ G++D+A  +  +M + G   +VVTYS LI G      + 
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A  + E+M +    P +V+ + LI GLCK G ++EA       + +   PDVVTY  L+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            G+C+AG+   A +L   M+  G+ P+ +  + L     +++   E C
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 632



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 9/209 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---------LDEAVQLFEK 52
           L K   ++ AL LF ++   G  P+  ++NTII G C  ++         LDEA +L ++
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKR 497

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
           +T     P+ +T++ LI   C   R+DDA  +   M+++  K  VVT + LI G  K+  
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
           +K A +V + M  +  SP++V+Y+ L+ G C+ G  E A       +   L P+VVTY  
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           L+ G CKA R  EA  ++  M  +G  P+
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPN 646



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 4/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++   +   G  PD++TYNT++ G+C   + + A +L   +    L PN
Sbjct: 552 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 611

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+   CK  R+ +A  +F++M   G   N+ TY+ LI G+  +  +     ++ 
Sbjct: 612 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 671

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYC 178
           EM    ISP+ V Y  L   LCK G    AL        +L +    D V Y   + G  
Sbjct: 672 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDGLL 730

Query: 179 KAGRPTEAMQLYDSMLRNGIMP 200
           +AG+   A+     M+R G +P
Sbjct: 731 EAGKMEMALGFVRDMVRGGQLP 752



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 34/220 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP- 60
           L K    +A  K+   + DRG  PD  T+ TI+CG C   ++DEA  + +++    + P 
Sbjct: 54  LSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPY 113

Query: 61  ------------------------------NSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                         NS  + I++ A CK  R+DDA  +   M E
Sbjct: 114 FATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSE 173

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           K       +   ++ G   S  +  A  VY    EN   P +V+ ++L++G C RG +++
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDK 230

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           A        D    PD V+Y  ++ G CKAGR  EA++L+
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF 270



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 2/152 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +F Q+   G  P++ TY  +I G+CS  ++D  ++LF ++ C  + P+
Sbjct: 622 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 681

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE--KGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            + +  L    CK GR   A  +  +  E  +        Y   +DG  ++  M+ A   
Sbjct: 682 HVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGF 741

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
             +M      P     + L+ GLCK G   EA
Sbjct: 742 VRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 773



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 5/173 (2%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G+ P  + + ++I G+C++ R  EAV++F  +      P    + +LID+  K    + 
Sbjct: 4   QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEA 62

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
              M   M+++G   +  T++ ++ G  K+  M  A  V +EM    I P   + S L  
Sbjct: 63  VKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAH 122

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            LC RG ME A       L+   + +   Y I++   CKA R  +A++L  +M
Sbjct: 123 ELCLRGSMERAFQ----LLEIMPVANSSAYNIVVVALCKAARVDDALELARTM 171



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 2/134 (1%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M ++G     + ++ +I G+        A  ++  M E   SP    Y++LID L KR  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQE 59

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
            E         +D    PD  T+  ++ G CKAG+  EA  + D M R+ ++P     S+
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM-RSRMIPPYFATSS 118

Query: 208 LADYNLQSSGSQEH 221
              + L   GS E 
Sbjct: 119 FLAHELCLRGSMER 132


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + +A K    +   G+ P+I  YN +I GYC    L EA+ L  ++   ++ P+
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ILI   C   RM++A  +  +M +KG   N VTY+ LIDGY K  NM+ A +V  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I PNI+++S LIDG CK G ME A+  +   +   LLPDVV Y  LI G+ K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA +L+  M   G+ P+   LS L D
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLID 516



 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D   K++G +  RG  P+++TY T+I G C      +A +LF+++   ++ P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TILI   C E R+ +A  MF  M   G   N+ TY+ ++DGY K  ++K A ++Y+
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + PN+V++ ILIDGLCK   M  A           ++P++  Y  LI GYCKAG
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+ L+  + ++ I+PD    S L
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSIL 374



 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +F  + + G+ P++ TYNT++ GYC +  + +A++L++++    L PN
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILID  CK   M  A      M   G   N+  Y+CLIDGY K+ N+  A  ++ 
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ ++ I P++ +YSILI GLC    MEEA            LP+ VTY  LI GYCK G
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+++   M   GI P+ +  STL D
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLID 446



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 114/187 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL L  ++    + PD+ TY+ +I G C ++R++EA  L +++      PN++
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID +CKEG M+ A  + S+M EKG + N++T+S LIDGY K+  M++A  +Y EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V+Y+ LIDG  K G  +EA        +  L P+V T + LI G CK GR 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 184 TEAMQLY 190
           ++A++L+
Sbjct: 525 SDAIKLF 531



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 5/201 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +   +  +L      P++  +  +I  +  +  ++EA+ ++ K+  +   P      +++
Sbjct: 111 SVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVL 165

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D   K+GR D    ++  M+ +G   NVVTY  LIDG  +  +   AF +++EM E  I 
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V Y+ILI GLC    + EA   F    ++ +LP++ TY  ++ GYCK     +A++L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           Y  ML +G++P+ +    L D
Sbjct: 286 YQEMLGDGLLPNVVTFGILID 306



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P +   N ++ G     R D   +++  +      PN +T+  LID  C++G    A  +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M+EK     VV Y+ LI G      +  A  ++  M  + + PN+ +Y+ ++DG CK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              +++AL  +   L + LLP+VVT+ ILI G CK      A +    M   G++P+  +
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 205 LSTLAD 210
            + L D
Sbjct: 336 YNCLID 341



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 13/172 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL+LF Q+    ++PDI+T    +     L  LD    +   +    L  +      L
Sbjct: 714 NKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 773

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK--SQNMKSAFDVYEEMCEN 126
           I+ + K G +  A   FS +L        V  +C   G  +   Q+ +S  + Y      
Sbjct: 774 INMYSKCGEIGTAR-RFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDY------ 826

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++ P I  +  ++D LC+ GL+ EA Y F   L   + P+ V +  L+ G C
Sbjct: 827 SLRPRISHFGCMVDLLCRAGLLTEA-YEF--ILKMPVRPNAVVWRTLL-GAC 874


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A +L   L + G+ P++   N +I   C   R  EA +LF  +    L+PN
Sbjct: 310 LRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPN 369

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN--------- 112
            +T+ ILI + CK G MDDA  MF +M EKG +  V  Y+ LI+GY +  N         
Sbjct: 370 EVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLN 429

Query: 113 --------------------------MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                     + SA +++ EM  N +S N+ +++ LI G CK G
Sbjct: 430 EMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDG 489

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M+EA   F   +D+ ++P+ VT+ ++I GYC+ G   +A QLYD M+  G+ PD     
Sbjct: 490 NMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYR 549

Query: 207 TL 208
           +L
Sbjct: 550 SL 551



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL +F ++ ++G+   +  YN++I GYC  +   +A  L  ++    L P+
Sbjct: 380 LCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPS 439

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +++ LI   C++G +  A  +  +M   G   NV T++ LI G+ K  NM  A  +++
Sbjct: 440 AASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD 499

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR------ 175
           +M ++++ PN V+++++I+G C+ G + +A   +   +D  L PD  TY  LI       
Sbjct: 500 KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTL 559

Query: 176 -----------------------------GYCKAGRPTEAMQLYDSMLRNGIMPD 201
                                        G+CK GR TE   ++D M   G+  D
Sbjct: 560 GAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLD 614



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 104/309 (33%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP--- 60
           K+ ++D A +LF ++ D  + P+ +T+N +I GYC +  + +A QL++++    L P   
Sbjct: 487 KDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNY 546

Query: 61  --------------------------------NSITFTILIDAFCKEGRMDDA------- 81
                                           NS + T L+  FCKEGR+ +        
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606

Query: 82  ----------------------------TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
                                       +++F +M EKG K + V ++C+ID + K +N+
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRG-------LMEEAL--------YAFHCA 158
             A + +++M  +  SPN+V+Y++LI+ LCK G       L EE L        + ++C 
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCF 726

Query: 159 LD-------------------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           LD                      L + VT+  LI+G+CKAG+   A+ L  +   +G  
Sbjct: 727 LDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFF 786

Query: 200 PDGLLLSTL 208
           PD +  ST+
Sbjct: 787 PDCISYSTI 795



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++   + +RG+  D +TY T++ G+C    L+ A+++ + +  +   P+  + + ++D
Sbjct: 249 AVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVD 308

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G +D A  +   + E G   N+   + LID   K +  + A  ++  M    + P
Sbjct: 309 GLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEP 368

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y+ILI  LCKRG+M++AL  F    +  +   V  Y  LI GYC+     +A  L 
Sbjct: 369 NEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL 428

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+  G+ P     S L
Sbjct: 429 NEMVEKGLAPSAASYSPL 446



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 1/191 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  AL  + ++   G  P+++TY  +I   C    L  A  L E++   +  PNS 
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   +D    EG ++ A ++ + +LE G  AN VT++ LI G+ K+  ++ A D+ +  
Sbjct: 722 TYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+   P+ +SYS +I+ LCK G + +A   ++  L   L PD+V Y ILIR     G  
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEF 840

Query: 184 TEAMQLYDSML 194
            + + +Y  M+
Sbjct: 841 DKGLGIYSDMV 851



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ ++G++PD + +  +I  +     + +A+  ++K+      PN +T+T+LI+  C
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLC 696

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +  A ++  +ML      N  TY+C +D       ++ A  ++  + E  ++ N V
Sbjct: 697 KSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLA-NTV 755

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LI G CK G ++ A+       ++   PD ++Y+ +I   CK G   +A QL++ M
Sbjct: 756 TFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEM 815

Query: 194 LRNGIMPD 201
           L  G+ PD
Sbjct: 816 LYKGLKPD 823



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  L  ++  +G++   + YN ++ G C  NR+ EAV++   +    +  + +T+ 
Sbjct: 210 NLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYR 269

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FC+   ++ A  M   ML      +V + S ++DG  K  ++  AF +   + E 
Sbjct: 270 TLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGEL 329

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ + + LID LCK     EA   F    +  L P+ VTYAILI   CK G   +A
Sbjct: 330 GMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDA 389

Query: 187 MQLYDSMLRNGI 198
           + ++D M   GI
Sbjct: 390 LCMFDRMREKGI 401



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 105/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L +A++L  ++   G+  ++ T+ T+I G+C    +DEA +LF+K+    + PN
Sbjct: 450 LCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPN 509

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ++I+ +C+ G +  A  ++ +M+++G   +  TY  LI     +     A +  +
Sbjct: 510 EVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVD 569

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  N +  N  S + L+ G CK G + E  + +       +  D++++ +++    K  
Sbjct: 570 DLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLH 629

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +   L+  M   G+ PD +  + + D
Sbjct: 630 DGEKISVLFREMKEKGVKPDNVFHTCMID 658



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK      A  LF ++       D   Y   I  YC +  LD A  L  ++    +K +
Sbjct: 170 LIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGS 229

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +L+   C+  R+ +A  + + M+E+G  A+ VTY  L+ G+ +++ ++ A ++ +
Sbjct: 230 AVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTD 289

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKA 180
           +M   +  P++ S S ++DGL KRG +++A +   C L    ++P++     LI   CK 
Sbjct: 290 DMLSLHFVPSVASCSFMVDGLRKRGHIDKA-FRLACHLGELGMVPNLFACNALIDKLCKD 348

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  EA +L+  M   G+ P+ +  + L
Sbjct: 349 RRFREAERLFRGMANRGLEPNEVTYAIL 376



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 85/182 (46%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T + I+     + +   A  LF+++   +   +   +T  I A+C+   +D A  + ++M
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRM 221

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             KG K + V Y+ L+ G  ++  +  A +V   M E  I  + V+Y  L+ G C+   +
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E AL      L  H +P V + + ++ G  K G   +A +L   +   G++P+    + L
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNAL 341

Query: 209 AD 210
            D
Sbjct: 342 ID 343



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 73/164 (44%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           Y  L R  +A  +        +     T + ++ A  K  +   A  +F +M++     +
Sbjct: 135 YLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLD 194

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
              Y+  I  Y + +N+  A  +   M    +  + V Y++L+ GLC+   + EA+   +
Sbjct: 195 EYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKN 254

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             ++  ++ D VTY  L+ G+C+      A+++ D ML    +P
Sbjct: 255 SMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 118/198 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G  PDI+ YN II   C   R+++A+  F+++    ++PN +T+T L++
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR +DA  +   M+++    NV+TYS L+D + K+  +  A +++EEM   +I P
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS LI+GLC    ++EA   F   +     PDVV+Y  LI G+CKA R  + M+L+
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G++ + +  +TL
Sbjct: 354 RKMSQRGLVNNTVTYNTL 371



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 125/207 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +  A ++F ++    ++PDI+TY+++I G C  +R+DEA Q+F+ +      P+
Sbjct: 270 FVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  LI+ FCK  R++D   +F KM ++G   N VTY+ LI G+F+  ++  A + + 
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFS 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +SP+I +Y+IL+ GLC  GL+E+AL  F     + +  D+VTY  +I+G CK G
Sbjct: 390 QMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTG 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A  L+ S+   G+ PD +  +T+
Sbjct: 450 KVEDAWGLFCSLSLKGLKPDIVTYTTM 476



 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 115/202 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL + G++   G EPD +T  +++ G+C  NR+ +AV L +K+  +  +P+ + + 
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYN 194

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK  R++DA   F ++  KG + NVVTY+ L++G   S     A  +  +M + 
Sbjct: 195 AIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKR 254

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+++YS L+D   K G + EA   F   +   + PD+VTY+ LI G C   R  EA
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            Q++D M+  G  PD +  +TL
Sbjct: 315 NQMFDLMVSKGCFPDVVSYNTL 336



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 116/200 (58%), Gaps = 2/200 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  +  +G  PD+++YNT+I G+C   R+++ ++LF K++   L  N++T+ 
Sbjct: 310 RIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYN 369

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F + G +D A   FS+M   G   ++ TY+ L+ G   +  ++ A  ++E+M ++
Sbjct: 370 TLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS 429

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            +  +IV+Y+ +I G+CK G +E+A +   C+L    L PD+VTY  ++ G C  G   E
Sbjct: 430 EMDLDIVTYTTVIQGMCKTGKVEDA-WGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 186 AMQLYDSMLRNGIMPDGLLL 205
              LY  M + G+M +  +L
Sbjct: 489 VEALYTKMKQEGLMKNDSML 508



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    D  + L  ++   G+  D+ T+N +I  +C   ++  A+ +  K+  +  +P+
Sbjct: 95  IVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPD 154

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   L++ FC+  R+ DA  +  KM+E G + ++V Y+ +ID   K++ +  A D ++
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFK 214

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    I PN+V+Y+ L++GLC  G   +A       +   + P+V+TY+ L+  + K G
Sbjct: 215 EIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNG 274

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA ++++ M+R  I PD +  S+L
Sbjct: 275 KVLEAKEIFEEMVRMSIDPDIVTYSSL 301



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 116/216 (53%), Gaps = 4/216 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL  F ++  +G+ P+++TY  ++ G C+  R ++A +L   +   ++ PN
Sbjct: 200 LCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPN 259

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L+DAF K G++ +A  +F +M+      ++VTYS LI+G      +  A  +++
Sbjct: 260 VITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++VSY+ LI+G CK   +E+ +  F       L+ + VTY  LI+G+ + G
Sbjct: 320 LMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVG 379

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLADYNL 213
              +A + +  M   G+ PD     +LL  L D  L
Sbjct: 380 DVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 109/208 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +++  L  A+ LF ++      P I+ +N ++     + + D  + L +K+  + ++ + 
Sbjct: 61  LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF I+I+ FC   ++  A  +  KML+ G + + VT   L++G+ +   +  A  + ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+IV+Y+ +ID LCK   + +AL  F       + P+VVTY  L+ G C +GR
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A +L   M++  I P+ +  S L D
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLD 268



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 88/153 (57%), Gaps = 2/153 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF +++ RGL  + +TYNT+I G+  +  +D+A + F ++    + P+  
Sbjct: 342 KAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIW 401

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   C  G ++ A ++F  M +     ++VTY+ +I G  K+  ++ A+ ++  +
Sbjct: 402 TYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461

Query: 124 CENNISPNIVSYSILIDGLCKRGLME--EALYA 154
               + P+IV+Y+ ++ GLC +GL    EALY 
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYT 494



 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL 53
           K   ++ A  LF  L+ +GL+PDI+TY T++ G C+     E   L+ K+
Sbjct: 447 KTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKM 496


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 118/200 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  AL  F  +T +G++PD++ YN++I G CS  R +EA  L   +    + PN
Sbjct: 158 LCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPN 217

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF +L+D FCKEG++  A  +   M+  G + +VVTY+ +I G+     M  A  V+E
Sbjct: 218 VQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFE 277

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN+V+YS LI G CK   + +A++     ++N L  DVVT++ LI G+CKAG
Sbjct: 278 LMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAG 337

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           RP  A++L+ +M  +  +P+
Sbjct: 338 RPEAAIELFCTMHEHHQLPN 357



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 113/208 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+K+F  +  +GL P+++TY+++I G+C    +++A+ + +++    L  + +T++
Sbjct: 268 QMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWS 327

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FCK GR + A  +F  M E     N+ T + ++DG FK Q    A  ++ +M + 
Sbjct: 328 TLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKM 387

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  NIV+Y+I++DG+C  G   +A   F C     +  DVV Y  +I+G CK G   +A
Sbjct: 388 NLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDA 447

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
             L   M  NG  P+    + L    LQ
Sbjct: 448 EDLLMKMEENGCPPNEFTYNVLVRGLLQ 475



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 120/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +   G+EPD++TYN++I G+C L+++++AV++FE +    L PN +
Sbjct: 230 KEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVV 289

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI  +CK   ++ A  +  +M+  G   +VVT+S LI G+ K+   ++A +++  M
Sbjct: 290 TYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTM 349

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E++  PN+ + +I++DGL K     EA+  F      +L  ++VTY I++ G C  G+ 
Sbjct: 350 HEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKF 409

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +L+  +   GI  D +  +T+
Sbjct: 410 NDARELFSCLPSKGIQIDVVAYTTM 434



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 101/189 (53%), Gaps = 1/189 (0%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           +RG +  +I Y+TI+   C    L  A+  F  +TC  ++P+ + +  LI   C  GR +
Sbjct: 142 NRGFDL-LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWN 200

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +AT +   M+ KG   NV T++ L+D + K   +  A  +   M    + P++V+Y+ +I
Sbjct: 201 EATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVI 260

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            G C    M +A+  F   +   LLP+VVTY+ LI G+CK     +A+ + D M+ NG+ 
Sbjct: 261 SGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLN 320

Query: 200 PDGLLLSTL 208
            D +  STL
Sbjct: 321 LDVVTWSTL 329



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 1/211 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +++K  H   A+ L       G++PD+ T   +I   C L        +   +  + ++P
Sbjct: 16  VIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEP 75

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +TF  LI+  C EG +  A      + + G ++N  T+  +I+G  K  +   A    
Sbjct: 76  TVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYL 135

Query: 121 EEMCENNISPNI-VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           E++   N   ++ ++YS ++D LCK G++  AL  F       + PD+V Y  LI G C 
Sbjct: 136 EKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCS 195

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            GR  EA  L  +M+R GIMP+    + L D
Sbjct: 196 FGRWNEATTLLGNMMRKGIMPNVQTFNVLVD 226



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 36/222 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--------------------- 42
           K  +++ A+ +  ++ + GL  D++T++T+I G+C   R                     
Sbjct: 300 KTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQ 359

Query: 43  -----LD---------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                LD         EA+ LF K+  + L+ N +T+ I++D  C  G+ +DA  +FS +
Sbjct: 360 TCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCL 419

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             KG + +VV Y+ +I G  K   +  A D+  +M EN   PN  +Y++L+ GL +R  +
Sbjct: 420 PSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDI 479

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             +           L  D  T  +LI  Y  A +   A+Q++
Sbjct: 480 SRSTKYLMLMKGKGLSADATTTELLIS-YFSANKENSALQVF 520



 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 49/129 (37%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P    F  L     K      A  +       G K +V T + +I+     ++    F V
Sbjct: 5   PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              M +  + P +V+++ LI+GLC  G +  A        D     +  T+  +I G CK
Sbjct: 65  LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124

Query: 180 AGRPTEAMQ 188
            G    A+ 
Sbjct: 125 VGDTAGAIS 133


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K  ++  A  +  ++  RGL+P++ T+ T+I G C +   + A +LF KL      KP
Sbjct: 253 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 312

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T++I  +C+EG++  A M+  +M+E+G K N  TY+ LI G+ K  +   AF++ 
Sbjct: 313 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 372

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +    PNI +Y+ +IDG CK+G ++EA      A    L  D +TY ILI  +CK 
Sbjct: 373 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 432

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G  T A+ L+D M+ NG  PD
Sbjct: 433 GHITYALDLFDRMVENGCCPD 453



 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 113/202 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A  L  ++ ++GL+P+  TY T+I G+C     D A +L  K+      PN  
Sbjct: 326 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 385

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID FCK+G++ +A  +      +G K + +TY+ LI  + K  ++  A D+++ M
Sbjct: 386 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 445

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN   P+I +Y+ LI   C++  MEE+   F   L   LLP   TY  +I GYCK GR 
Sbjct: 446 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 505

Query: 184 TEAMQLYDSMLRNGIMPDGLLL 205
           T A+++++ M++NG   D +L+
Sbjct: 506 TMALRVFERMVQNGCFADSILM 527



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T  G+ PD  ++  ++   C   +++E   L   +       ++ T T+++ 
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 216

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C++GR  D +  F +MLE G   NVV Y+  IDG  K + +K AF V EEM    + P
Sbjct: 217 SLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 276

Query: 131 NIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+ +++ LIDGLCK G  E A   F      +   P+V TY ++I GYC+ G+   A  L
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 336

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              M+  G+ P+    +TL
Sbjct: 337 LVRMVEQGLKPNTNTYTTL 355



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 1/197 (0%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           + F ++ + G  P+++ Y   I G C    + +A  + E++    LKPN  T T LID  
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288

Query: 73  CKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           CK G  + A  +F K+++    K NV TY+ +I GY +   +  A  +   M E  + PN
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +Y+ LI G CK G  + A    +       LP++ TY  +I G+CK G+  EA ++  
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408

Query: 192 SMLRNGIMPDGLLLSTL 208
                G+  D +  + L
Sbjct: 409 MATSQGLKFDKITYTIL 425



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 35/165 (21%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           A ++F+ +T   + P+  +F  L+   C+EG++++   + + M   G             
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYG------------- 203

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
                      F +    C           ++++  LC++G  ++    F   L+    P
Sbjct: 204 -----------FSLDNATC-----------TVVVRSLCEKGRFKDVSEFFRRMLEMGTPP 241

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +VV Y   I G CK     +A  + + M+  G+ P+    +TL D
Sbjct: 242 NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 286


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K  ++  A  +  ++  RGL+P++ T+ T+I G C +   + A +LF KL      KP
Sbjct: 261 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 320

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T++I  +C+EG++  A M+  +M+E+G K N  TY+ LI G+ K  +   AF++ 
Sbjct: 321 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 380

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +    PNI +Y+ +IDG CK+G ++EA      A    L  D +TY ILI  +CK 
Sbjct: 381 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 440

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G  T A+ L+D M+ NG  PD
Sbjct: 441 GHITYALDLFDRMVENGCCPD 461



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A  L  ++ ++GL+P+  TY T+I G+C     D A +L  K+      PN  
Sbjct: 334 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 393

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID FCK+G++ +A  +      +G K + +TY+ LI  + K  ++  A D+++ M
Sbjct: 394 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 453

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN   P+I +Y+ LI   C++  MEE+   F   L   LLP   TY  +I GYCK GR 
Sbjct: 454 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 513

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T A+++++ M++NG   D +    L
Sbjct: 514 TLALRVFERMVQNGCFADSITYGAL 538



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T  G+ PD  ++  ++   C   +++E   L   +       ++ T T+++ 
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C++GR  D +  F +MLE G   NVV Y+  IDG  K + +K AF V EEM    + P
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 284

Query: 131 NIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+ +++ LIDGLCK G  E A   F      +   P+V TY ++I GYC+ G+   A  L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              M+  G+ P+    +TL
Sbjct: 345 LVRMVEQGLKPNTNTYTTL 363



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 99/193 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++   G  P+I TYN +I G+C   ++ EA ++    T   LK + IT+TI
Sbjct: 373 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 432

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK+G +  A  +F +M+E G   ++  Y+ LI  Y + + M+ +   +++     
Sbjct: 433 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 492

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P   +Y+ +I G CK G    AL  F   + N    D +TY  LI G CK  R  EA 
Sbjct: 493 LLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAK 552

Query: 188 QLYDSMLRNGIMP 200
            LY+ ML   ++P
Sbjct: 553 ALYEGMLDKRLVP 565



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 1/197 (0%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           + F ++ + G  P+++ Y   I G C    + +A  + E++    LKPN  T T LID  
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 73  CKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           CK G  + A  +F K+++    K NV TY+ +I GY +   +  A  +   M E  + PN
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +Y+ LI G CK G  + A    +       LP++ TY  +I G+CK G+  EA ++  
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 192 SMLRNGIMPDGLLLSTL 208
                G+  D +  + L
Sbjct: 417 MATSQGLKFDKITYTIL 433



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 35/165 (21%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           A ++F+ +T   + P+  +F  L+   C+EG++++   + + M   G             
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYG------------- 211

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
                      F +    C           ++++  LC++G  ++    F   L+    P
Sbjct: 212 -----------FSLDNATC-----------TVVVRSLCEKGRFKDVSEFFRRMLETGTPP 249

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +VV Y   I G CK     +A  + + M+  G+ P+    +TL D
Sbjct: 250 NVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 294


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 123/206 (59%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  +  A + + ++  R L+PDI+TY+ +I G C  +RLDEA ++F  +      P+ 
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ILI+ +CK  +++    +F +M ++G   N VTY+ LI GY ++  +  A +++  
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PNI++Y++L+ GLC  G +E+AL        N +  D+VTY I+IRG CKAG 
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A  +Y S+   G+MPD    +T+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTM 472



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 112/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F Q+   G +P+++ YNTII G C   ++D A+ L  ++    + P+ +T+  LI 
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  DAT M S M ++    +V T++ LID   K   +  A + YEEM   ++ P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS+LI GLC    ++EA   F   +     PDVVTY+ILI GYCK+ +    M+L+
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G++ + +  + L
Sbjct: 350 CEMSQRGVVRNTVTYTIL 367



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 118/213 (55%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++   G+ PD++TYN++I G CS  R  +A ++   +T  ++ P+
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  LIDA  KEGR+ +A   + +M+ +    ++VTYS LI G      +  A +++ 
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+YSILI+G CK   +E  +  F       ++ + VTY ILI+GYC+AG
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
           +   A +++  M+  G+ P+     +LL  L D
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 121/196 (61%), Gaps = 2/196 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++FG +  +G  PD++TY+ +I GYC   +++  ++LF +++   +  N++T+T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI  +C+ G+++ A  +F +M+  G   N++TY+ L+ G   +  ++ A  +  +M +N
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            +  +IV+Y+I+I G+CK G + +A +  +C+L+   L+PD+ TY  ++ G  K G   E
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADA-WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484

Query: 186 AMQLYDSMLRNGIMPD 201
           A  L+  M  +GI+P+
Sbjct: 485 ADALFRKMKEDGILPN 500



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 110/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  + L+ Q+   G+  ++ T N ++  +C  ++L  A+    K+  +  +P+ +TF  L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++ FC+  R+ DA  MF +M+  G K NVV Y+ +IDG  KS+ + +A D+   M ++ I
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ LI GLC  G   +A     C     + PDV T+  LI    K GR +EA +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
            Y+ M+R  + PD +  S L
Sbjct: 278 FYEEMIRRSLDPDIVTYSLL 297



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  AL   G++   G EP I+T+ +++ G+C  +R+ +A+ +F+++  +  KPN + + 
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID  CK  ++D+A  + ++M + G   +VVTY+ LI G   S     A  +   M + 
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++ +++ LID   K G + EA   +   +   L PD+VTY++LI G C   R  EA
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  M+  G  PD +  S L +
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILIN 334



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD +L LF  +      P I  ++ ++     + + D  + L+E++  + +  N 
Sbjct: 57  IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  IL++ FC+  ++  A     KM++ G + ++VT+  L++G+ +   +  A  ++++
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      PN+V Y+ +IDGLCK   ++ AL   +    + + PDVVTY  LI G C +GR
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A ++   M +  I PD    + L D
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALID 264



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 95/163 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF +++ RG+  + +TY  +I GYC   +L+ A ++F ++    + PN I
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+   C  G+++ A ++ + M + G  A++VTY+ +I G  K+  +  A+D+Y  +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
               + P+I +Y+ ++ GL K+GL  EA   F    ++ +LP+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 115/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A+KL  ++ +RG  P+++TYN ++   C L+ +  A  + +K+      PN +TF 
Sbjct: 72  KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 131

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D FCK G +DDA  +   M+ KG + NVVTYS LIDG  KSQ    A +V EEM  +
Sbjct: 132 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS 191

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P+  +YS LI GLCK   +EEA         +   PDVV Y+ +I  +CK+G+  EA
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +    M +    PD +  +T+ D
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVID 275



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D A KL G +  +G+ P+++TY+ +I G C   +  EA ++ E++    + P++ 
Sbjct: 139 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAF 198

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI   CK  ++++A  M  +M   G   +VV YS +I  + KS  +  A    +EM
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGR 182
            +   SP++V+Y+ +IDGLCK G + EA            +LPDVVTY+ +I G CK+  
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +L D M + G  PD +  +T+ D
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIID 346



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 3/201 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L AAL+L  ++   G  PD  T+  II    +   LD A+     + C    PN +T+T 
Sbjct: 6   LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC---DPNVVTYTA 62

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI AF +  ++++A  +  +M E+G   N+VTY+ L+D   K   + +A DV ++M E  
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+++++ L+DG CKRG +++A       +   + P+VVTY+ LI G CK+ +  EA 
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++ + M  +G+ PD    S L
Sbjct: 183 EVLEEMKASGVTPDAFTYSAL 203



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 109/201 (54%), Gaps = 3/201 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+     L   G +P+++TY  +I  +    +L+EA++L E++      PN +T+ +
Sbjct: 41  LDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 97

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA CK   +  A  +  KM+E G   NV+T++ L+DG+ K  N+  A  +   M    
Sbjct: 98  LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 157

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V+YS LIDGLCK     EA         + + PD  TY+ LI G CKA +  EA 
Sbjct: 158 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAE 217

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q+   M  +G  PD ++ S++
Sbjct: 218 QMLRRMAGSGCTPDVVVYSSI 238



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A ++  ++   G  PD++ Y++II  +C   +L EA +  +++   +  P+
Sbjct: 207 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPK-ANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+  +ID  CK G++ +A ++  +M E G    +VVTYS +I+G  KS  +  A  + 
Sbjct: 267 VVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 326

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + MC+   +P++V+Y+ +IDGLCK G +EEA Y           P+VVTY  LI G CKA
Sbjct: 327 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 386

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA ++ + M   G  P+ +  +T+ +
Sbjct: 387 RKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA  +  ++ + G  P+++T+N+++ G+C    +D+A +L   +    ++PN
Sbjct: 102 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 161

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK  +  +A  +  +M   G   +  TYS LI G  K+  ++ A  +  
Sbjct: 162 VVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +  +P++V YS +I   CK G + EA             PDVVTY  +I G CK G
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281

Query: 182 RPTEAMQLYDSMLRNG-IMPDGLLLSTL 208
           +  EA  + D M  +G ++PD +  ST+
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTV 309



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 3/183 (1%)

Query: 14  LFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +  Q+ + G + PD++TY+T+I G C  + L EA +L +++      P+ +T+T +ID  
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 348

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK GR+++A  +   M   G   NVVTY+ LI G  K++ +  A  V EEM      PN+
Sbjct: 349 CKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNL 408

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHL--LPDVVTYAILIRGYCKAGRPTEAMQLY 190
           V+Y+ +++GLC  G ++EA        D      PD  TY  ++     +    EA QL 
Sbjct: 409 VTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 468

Query: 191 DSM 193
           + M
Sbjct: 469 EQM 471



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C+   L  A++L E++      P++ T T +I A    G +D A      M   G   NV
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           VTY+ LI  + +++ ++ A  + EEM E    PN+V+Y++L+D LCK  ++  A      
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++    P+V+T+  L+ G+CK G   +A +L   M+  G+ P+ +  S L D
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KL  ++   G  PD++TY TII G C   RL+EA  L + +      PN
Sbjct: 313 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI   CK  ++D+A  +  +M   G   N+VTY+ +++G   S  +K A  + +
Sbjct: 373 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 432

Query: 122 EMCENNI--SPNIVSYSILIDGLCKRGLMEEA 151
            M +     SP+  +Y  +++ L    L++EA
Sbjct: 433 RMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 124/203 (61%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ PD ITY+++I G+C  NRL EA Q+ + +     +P
Sbjct: 323 VFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEP 382

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T++ILI+++CK  R+D+   +F ++  KG  A+ VTY+ L+ G+ +S  +  A +++
Sbjct: 383 NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELF 442

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    + P++V+Y IL+DGLC  G +++AL  F     + ++  +  Y I+I G C A
Sbjct: 443 QEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNA 502

Query: 181 GRPTEAMQLYDSMLRNGIMPDGL 203
            +  +A  L+ S+   G+ PD L
Sbjct: 503 SKVDDAWSLFCSLSVKGVKPDVL 525



 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 124/213 (58%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +LD AL LF ++  +G++ D++ Y++II G C+  R D+  ++  ++    + PN
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LID F KEG++ +A  ++++M+ +G   + +TYS LIDG+ K   +  A  + +
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD 373

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNIV+YSILI+  CK   ++  +  F       L+ D VTY  L++G+C++G
Sbjct: 374 LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSG 433

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
           +   A +L+  M+  G+ P     G+LL  L D
Sbjct: 434 KLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 117/200 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G+    G EP+ IT++T+I G+C   R+ EAV L +++  ++ +PN +T   LI+
Sbjct: 123 AFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN 182

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +GR+ +A ++  +M++ G +AN +TY  +++   KS N   A D++ +M E +I  
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA 242

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V YSI+ID LCK G +++AL  F+      +  DVV Y+ +I G C  GR  +  ++ 
Sbjct: 243 SVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKML 302

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+   I+P+ +  S L D
Sbjct: 303 REMIGRNIIPNVVTFSALID 322



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 111/205 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++ +R ++  ++ Y+ +I   C    LD+A+ LF ++    +K + + ++ +I 
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +GR DD   M  +M+ +    NVVT+S LID + K   +  A ++Y EM    I+P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++YS LIDG CK   + EA       +     P++VTY+ILI  YCKA R    M+L+
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
             +   G++ D +  +TL     QS
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQS 432



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 123/215 (57%), Gaps = 2/215 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A ++   +  +G EP+I+TY+ +I  YC   R+D  ++LF +++   L  +++
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  FC+ G+++ A  +F +M+ +G   +VVTY  L+DG   +  ++ A +++E+M
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGR 182
            ++ +   I  Y+I+I G+C    +++A ++  C+L    + PDV+TY ++I G CK G 
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDA-WSLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +EA  L+  M  +G  P     + L   +L  SG
Sbjct: 540 LSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSG 574



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 108/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL L  ++   G E + ITY  ++   C       A+ LF K+    +K + + ++
Sbjct: 189 RVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID+ CK+G +DDA  +F++M  KG KA+VV YS +I G            +  EM   
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI PN+V++S LID   K G + EA   ++  +   + PD +TY+ LI G+CK  R  EA
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            Q+ D M+  G  P+ +  S L +
Sbjct: 369 NQMLDLMVSKGCEPNIVTYSILIN 392



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 105/199 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ +GL  D +TYNT++ G+C   +L+ A +LF+++    + P+ +
Sbjct: 396 KAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G +  A  +F KM +      +  Y+ +I G   +  +  A+ ++  +
Sbjct: 456 TYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSL 515

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++++Y+++I GLCK+G + EA   F    ++   P   TY ILIR +      
Sbjct: 516 SVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGV 575

Query: 184 TEAMQLYDSMLRNGIMPDG 202
             +++L + M   G   D 
Sbjct: 576 ISSVELIEEMKMRGFAADA 594



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           +++EA+ LFE +   +  P+ I F+ L  A  +    D       +M   G + N+ T +
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+ + + + +  AF V     +    PN +++S LI+G C  G + EA+      ++ 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
              P+VVT   LI G C  GR TEA+ L D M++ G
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYG 204



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 96/208 (46%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I +  ++ A+ LF  +      P +I ++ +          D  +   +++    ++ N 
Sbjct: 45  IVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNM 104

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+I+ FC++ ++  A  +  + L+ G + N +T+S LI+G+     +  A  + + 
Sbjct: 105 YTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDR 164

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    PN+V+ + LI+GLC +G + EAL      +      + +TY  ++   CK+G 
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L+  M    I    +  S + D
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVID 252



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF  L+ +G++PD++TYN +I G C    L EA  LF K+      P+  T+ 
Sbjct: 504 KVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYN 563

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           ILI A      +  +  +  +M  +G  A+  T   ++
Sbjct: 564 ILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 126/222 (56%), Gaps = 3/222 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L KE  L  A+ LFG++   G   P+ +TYN++I G+C + ++DEA+ L E++      P
Sbjct: 134 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 193

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T L++ FCK  R+DDA  + ++M  KG   NVVT++ L+DG  +   +  A  + 
Sbjct: 194 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHIL 253

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   + SP + +Y+ ++DG C+   +EEA       +D    P+VV++ I+IRG CK 
Sbjct: 254 GEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKV 311

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            R +EAM+L +   R    PD ++ +T+ D   +     E C
Sbjct: 312 NRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 1/187 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P  +TYN++I G C   R  EA  L E++      P+  T+T LI  FCK  + DDA  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLC 143
           F +++ +G + +VVTYSCLIDG  K   +K A D++  M ++ +  PN V+Y+ LI G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G M+EA+       +    PDVVTY  L+ G+CK  R  +A  L + M R G+ P+ +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 204 LLSTLAD 210
             ++L D
Sbjct: 232 TFTSLMD 238



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ L  ++ + G  PD++TY T++ G+C L RLD+A  L  ++T   L PN +TFT
Sbjct: 175 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFT 234

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  C+E R+ DA  +  +M  K     V TY+ ++DGY +   ++ A     E  E 
Sbjct: 235 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EM 292

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN+VS++I+I GLCK     EA+     A      PDVV Y  +I   C+  +  EA
Sbjct: 293 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEA 352

Query: 187 MQLYDSMLRN-GIMPDGLLLSTLADYNLQ 214
            ++Y  ML   G +P+ +  ST   + LQ
Sbjct: 353 CRVYRKMLEEPGCLPNSITYSTFDYWPLQ 381



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A  L  ++   G  PDI TY T+I G+C   + D+A+++FE+L     +P+
Sbjct: 64  LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 123

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T++ LID  CKEGR+ +A  +F +M++ G    N VTY+ LI G+ +   M  A ++ 
Sbjct: 124 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 183

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M E   SP++V+Y+ L++G CK   +++A    +      L P+VVT+  L+ G C+ 
Sbjct: 184 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRE 243

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R ++A+ +   M R    P     +T+ D
Sbjct: 244 NRLSDAVHILGEMRRKSCSPTVYTYNTILD 273



 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 28/49 (57%)

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           D   +P  VTY  LI G CKA R +EA  L + M+ +G +PD    +TL
Sbjct: 47  DAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 95


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 124/207 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ ++ AA K+F ++  +GL+P+++TYN++I G CS  +LDEA+ L +K++ + LKPN +
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK+  + +A  M   + ++G   NV+T++ LID Y K+  M  AF +   M
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN+ +Y+ LI G C+ G ++EA         N L  D+VTY IL+   CK G  
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++L D M   G+ P  L  + L D
Sbjct: 491 RKAVRLLDEMFEVGLNPSHLTYNALID 517



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL L  +++  GL+P+++TYN +I G+C    L EA ++ + +    L PN ITF  
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA+ K GRMDDA ++ S ML+ G   NV TY+CLI G+ +  N+K A  + +EM  N 
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALY----AFHCALD-NHLL------------------ 164
           +  ++V+Y+IL+D LCK+G   +A+      F   L+ +HL                   
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 165 ------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                        ++VTY +LI+G+C  G+  EA +L + ML  G++P+      L D
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 587



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  +     ++ ++  R +  +++T++ +I G C + +  +A  + E +      P+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +ID +CK G+M  A  +  +M+ K    N +T++ LIDG+ + +N+ +A  V+E
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN+V+Y+ LI+GLC  G ++EAL          L P+VVTY  LI G+CK  
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA ++ D + + G+ P+ +  +TL D
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLID 412



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 105/180 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P +ITYNTII GYC   ++ +A  L +++   ++ PN ITF ILID FC++  +  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M  +G + NVVTY+ LI+G   +  +  A  + ++M    + PN+V+Y+ LI+G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK+ +++EA           L P+V+T+  LI  Y KAGR  +A  L   ML  G+ P+
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 117/202 (57%), Gaps = 3/202 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK   ++  + + P+ IT+N +I G+C    +  A ++FE++    L+PN +T+  L
Sbjct: 284 DALLK---EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G++D+A  +  KM   G K NVVTY+ LI+G+ K + +K A ++ +++ +  +
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +PN+++++ LID   K G M++A       LD  + P+V TY  LI G+C+ G   EA +
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M  NG+  D +  + L D
Sbjct: 461 LAKEMEGNGLKADLVTYNILVD 482



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 16/198 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L   + D G+ P++ TYN +I G+C    + EA +L +++    LK + +
Sbjct: 416 KAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+DA CK+G    A  +  +M E G   + +TY+ LIDGYF+  N  +A +V   M
Sbjct: 476 TYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLM 535

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +     NIV+Y++LI G C +G +EEA    +  L+  L+P+  TY I           
Sbjct: 536 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI----------- 584

Query: 184 TEAMQLYDSMLRNGIMPD 201
                L D M+  G +PD
Sbjct: 585 -----LRDEMMEKGFIPD 597



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 100/199 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +D AL+ F +  D G     ++ N ++       R+     +++++   ++  N 
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TF ++I+  CK G+   A  +   M   G   +V+TY+ +IDGY K+  M  A  + +E
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN ++++ILIDG C+   +  A   F       L P+VVTY  LI G C  G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA+ L D M   G+ P+
Sbjct: 350 LDEALGLQDKMSGMGLKPN 368



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 97/181 (53%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I  + ++  Y     +D A++ F++      + ++++   ++ +  KEGR+     ++ +
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+ +    NVVT+  +I+G  K    + A DV E+M     SP++++Y+ +IDG CK G 
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M +A       +   + P+ +T+ ILI G+C+    T A ++++ M R G+ P+ +  ++
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 208 L 208
           L
Sbjct: 340 L 340



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NSI   +L+ A+ K G MD A   F +  + G + + ++ + ++    K   +     VY
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    I  N+V++ ++I+GLCK G  ++A             P V+TY  +I GYCKA
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  +A  L   M+   I P+ +  + L D
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILID 307



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A++L  ++ + GL P  +TYN +I GY        A+ +   +     + N
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRAN 543

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
            +T+ +LI  FC +G++++A  + ++MLEKG   N  TY  L D
Sbjct: 544 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 587


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 119/201 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F ++ ++G+   ++TYN +I G C   +  EAV+L  K+  V L PN +T+ I
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC  G+MD A  +F+++   G    +VTY+ LI GY K +N+  A D+ +EM E  
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P+ V+Y+ILID   +    E+A         + L+PDV TY++LI G C  G   EA 
Sbjct: 399 IAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEAS 458

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+ S+    + P+ ++ +T+
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTM 479



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 111/191 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL  ++   GL P+I+TYN +I G+C + ++D AV+LF +L    L P  +T+  LI 
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIA 376

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K   +  A  +  +M E+    + VTY+ LID + +    + A +++  M ++ + P
Sbjct: 377 GYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVP 436

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +YS+LI GLC  G M+EA   F    + HL P+ V Y  +I GYCK G    A++L 
Sbjct: 437 DVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLL 496

Query: 191 DSMLRNGIMPD 201
           + M+ +G++P+
Sbjct: 497 NEMVHSGMVPN 507



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 10/221 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C    +     +L   L + GL P+++ Y T+I G C    +  A  LF K+  +
Sbjct: 163 IMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRL 222

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L PN  T+++L++ F K+G   +   M+  M   G   N   Y+CLI  Y     +  A
Sbjct: 223 GLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKA 282

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V+ EM E  I+  +++Y+ILI GLC+     EA+   H      L P++VTY ILI G
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +C  G+   A++L++ +  +G+ P      TL  YN   +G
Sbjct: 343 FCDVGKMDTAVRLFNQLKSSGLSP------TLVTYNTLIAG 377



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 106/194 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++LF QL   GL P ++TYNT+I GY  +  L  A+ L +++    + P+ +T+TI
Sbjct: 349 MDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTI 408

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAF +    + A  M S M + G   +V TYS LI G     NMK A  +++ + E +
Sbjct: 409 LIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH 468

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ +I G CK G    AL   +  + + ++P+V ++   I   C+  +  EA 
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAE 528

Query: 188 QLYDSMLRNGIMPD 201
            L   M+ +G+ P 
Sbjct: 529 LLLGQMINSGLKPS 542



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 102/200 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++   GL P+  TY+ ++ G+       E  Q++E +    + PN+  +  LI 
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G +D A  +F++M EKG    V+TY+ LI G  + +    A  +  ++ +  +SP
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+ILI+G C  G M+ A+  F+    + L P +VTY  LI GY K      A+ L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M    I P  +  + L D
Sbjct: 392 KEMEERCIAPSKVTYTILID 411



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 17  QLTDRGLEPDII---TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           QLT     P +     Y+TI+  Y   +  D+A+     +      P S TF  L+    
Sbjct: 76  QLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLI 135

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +    D A  +F+++  K    +  ++  +I G  ++      F +   + E  +SPN+V
Sbjct: 136 RSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVV 194

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            Y+ LIDG CK G +  A   F C +D   L+P+  TY++L+ G+ K G   E  Q+Y++
Sbjct: 195 IYTTLIDGCCKYGNVMLAKNLF-CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYEN 253

Query: 193 MLRNGIMPDG 202
           M R+GI+P+ 
Sbjct: 254 MKRSGIVPNA 263


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 16/220 (7%)

Query: 5   ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA---------------VQ 48
           +CH L  +L  FG+LT  G +PD++T+NT++ G C  +R+ EA               V 
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           LF+++  + L P  ITF  LI+  C EGR+ +A  + +KM+ KG   +VVTY  +++G  
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K  + KSA ++  +M E +I P++V YS +ID LCK G   +A Y F   L+  + P+V 
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           TY  +I G+C  GR ++A +L   M+   I PD L  + L
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +GL  D++TY TI+ G C +     A+ L  K+    +KP+ + ++ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G   DA  +FS+MLEKG   NV TY+C+IDG+        A  +  +M E  I+P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++++ LI    K G + EA       L   + PD VTY  +I G+CK  R  +A  ++
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M      PD +  +T+ D
Sbjct: 425 DLMAS----PDVVTFNTIID 440



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 105/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF Q+ + GL P +IT+NT+I G C   R+ EA  L  K+    L  + +T+  +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  + SKM E   K +VV YS +ID   K  +   A  ++ EM E  I+P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+ +IDG C  G   +A       ++  + PDV+T+  LI    K G+  EA +L 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D ML   I PD +  +++
Sbjct: 390 DEMLHRCIFPDTVTYNSM 407



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 111/203 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  +++ RGL  +  TYNT+I G+C ++ L+ A  LF+++    + P++IT  I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  FC+  ++++A  +F  +       + V Y+ +I G  K   +  A+D++  +  + 
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+++I G C +  + +A   FH   DN   PD  TY  LIRG  KAG   +++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  NG   D   +  +AD
Sbjct: 628 ELISEMRSNGFSGDAFTIKMVAD 650



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 6/206 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D A  +F    D    PD++T+NTII  YC   R+DE +QL  +++   L  N+ 
Sbjct: 413 KHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FC+   ++ A  +F +M+  G   + +T + L+ G+ +++ ++ A +++E +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
             + I  + V+Y+I+I G+CK   ++EA   F C+L  H + PDV TY ++I G+C    
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            ++A  L+  M  NG  PD    +TL
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTL 613



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 72/282 (25%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ ++G+ P++ TYN +I G+CS  R  +A +L   +   ++ P+
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365

Query: 62  SITFTILIDA-----------------------------------FCKEGRMDDATMMFS 86
            +TF  LI A                                   FCK  R DDA  MF 
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425

Query: 87  KML-------------------------------EKGPKANVVTYSCLIDGYFKSQNMKS 115
            M                                 +G  AN  TY+ LI G+ +  N+ +
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+++EM  + + P+ ++ +IL+ G C+   +EEAL  F     + +  D V Y I+I 
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G CK  +  EA  L+ S+  +G+ PD      +  YN+  SG
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPD------VQTYNVMISG 581



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 4/199 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL L  ++ +  ++PD++ Y+ II   C      +A  LF ++    + PN  T+  +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D FC  GR  DA  +   M+E+    +V+T++ LI    K   +  A  + +EM    I 
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ V+Y+ +I G CK    ++A + F    D    PDVVT+  +I  YC+A R  E MQL
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              + R G++ +    +TL
Sbjct: 455 LREISRRGLVANTTTYNTL 473



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+  F  +         +  N +I  +  +NR D A+ L+ K+   ++  N  +F I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS------CLID---------GYFKSQN 112
           LI  FC   ++  +   F K+ + G + +VVT++      CL D         GY     
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
              A  ++++M E  ++P +++++ LI+GLC  G + EA    +  +   L  DVVTY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ G CK G    A+ L   M    I PD ++ S + D
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 85/146 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+AA  LF ++   G+ PD IT N ++ G+C   +L+EA++LFE +   ++  +++ + 
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I   CK  ++D+A  +F  +   G + +V TY+ +I G+     +  A  ++ +M +N
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601

Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL 152
              P+  +Y+ LI G  K G +++++
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSI 627



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF  L   G+EPD+ TYN +I G+C  + + +A  LF K+     +P++ 
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           T+  LI    K G +D +  + S+M   G   +  T   + D
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 58/136 (42%)

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +DDA   F  M+   P    V  + +I  + +      A  +Y +M    I  NI S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI   C    +  +L  F         PDVVT+  L+ G C   R +EA+ L+  M+  G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 198 IMPDGLLLSTLADYNL 213
            +    L   + +  L
Sbjct: 207 FLEAVALFDQMVEIGL 222


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 122/208 (58%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKP 60
           L K   +  A ++  ++  RG +P++ T+  +I G C     ++A +LF KL   +  KP
Sbjct: 282 LCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKP 341

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T +I  +C++ +M+ A M+ S+M E+G   N  TY+ LIDG+ K+ N + A+++ 
Sbjct: 342 NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELM 401

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M E   SPN+ +Y+ ++DGLCK+G ++EA         N L  D VTY ILI  +CK 
Sbjct: 402 NVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQ 461

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +A+ L++ M+++GI PD    +TL
Sbjct: 462 AEIKQALVLFNKMVKSGIQPDIHSYTTL 489



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F +  + GL P++I +  +I G C    + +A ++ E++     KPN  T T LID
Sbjct: 256 ALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALID 315

Query: 71  AFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             CK+G  + A  +F K++  +  K NV+TY+ +I GY + + M  A  +   M E  ++
Sbjct: 316 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLA 375

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN  +Y+ LIDG CK G  E A    +   +    P+V TY  ++ G CK GR  EA ++
Sbjct: 376 PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV 435

Query: 190 YDSMLRNGIMPDGLLLSTL 208
             S  RNG+  D +  + L
Sbjct: 436 LKSGFRNGLDADKVTYTIL 454



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 114/205 (55%), Gaps = 3/205 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++  RG++P+ ++Y  ++ GYC L  + E+ +    +       ++ T ++
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  FC++G +  A   F +  E G + N++ ++C+I+G  K  ++K AF++ EEM    
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRPTE 185
             PN+ +++ LIDGLCK+G  E+A   F   +  +NH  P+V+TY  +I GYC+  +   
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENH-KPNVLTYTAMISGYCRDEKMNR 361

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A  L   M   G+ P+    +TL D
Sbjct: 362 AEMLLSRMKEQGLAPNTNTYTTLID 386



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 109/206 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + A +L   + + G  P++ TYN I+ G C   R+ EA ++ +      L  + +
Sbjct: 390 KAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKV 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI   CK+  +  A ++F+KM++ G + ++ +Y+ LI  + + + MK +   +EE 
Sbjct: 450 TYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEA 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P   +Y+ +I G C+ G +  AL  FH   D+    D +TY  LI G CK  + 
Sbjct: 510 VRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKL 569

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA  LYD+M+  G+ P  +   TLA
Sbjct: 570 DEARCLYDAMIEKGLTPCEVTRVTLA 595



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 110/200 (55%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+   + A +LF +L      +P+++TY  +I GYC   +++ A  L  ++    L P
Sbjct: 317 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAP 376

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+T LID  CK G  + A  + + M E+G   NV TY+ ++DG  K   ++ A+ V 
Sbjct: 377 NTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVL 436

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +    N +  + V+Y+ILI   CK+  +++AL  F+  + + + PD+ +Y  LI  +C+ 
Sbjct: 437 KSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCRE 496

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            R  E+   ++  +R G++P
Sbjct: 497 KRMKESEMFFEEAVRFGLVP 516



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 101/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L  ++ ++GL P+  TY T+I G+C     + A +L   +      PN  T+  
Sbjct: 359 MNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNA 418

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D  CK+GR+ +A  +       G  A+ VTY+ LI  + K   +K A  ++ +M ++ 
Sbjct: 419 IVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSG 478

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+I SY+ LI   C+   M+E+   F  A+   L+P   TY  +I GYC+ G    A+
Sbjct: 479 IQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLAL 538

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + +  M  +G   D +    L
Sbjct: 539 KFFHRMSDHGCASDSITYGAL 559



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 96/192 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A K+       GL+ D +TY  +I  +C    + +A+ LF K+    ++P+
Sbjct: 423 LCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPD 482

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++T LI  FC+E RM ++ M F + +  G      TY+ +I GY +  N++ A   + 
Sbjct: 483 IHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFH 542

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++  + + ++Y  LI GLCK+  ++EA   +   ++  L P  VT   L   YCK  
Sbjct: 543 RMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKID 602

Query: 182 RPTEAMQLYDSM 193
               AM + + +
Sbjct: 603 DGCSAMVVLERL 614



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 101/189 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+++  ++ ++GL P   T N ++     +  ++ A  LF+++    ++PN +++ +
Sbjct: 148 VKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRV 207

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  +CK G + ++      M+E+G   +  T S ++  + +   +  A   +   CE  
Sbjct: 208 MVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMG 267

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+++++ +I+GLCKRG +++A       +     P+V T+  LI G CK G   +A 
Sbjct: 268 LRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAF 327

Query: 188 QLYDSMLRN 196
           +L+  ++R+
Sbjct: 328 RLFLKLVRS 336



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 92/193 (47%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           ++++  E        ++  +  + R+ EA+++  ++    L P++ T   ++    + G 
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           ++ A  +F +M  +G + N V+Y  ++ GY K  N+  +      M E     +  + S+
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           ++   C++G +  AL+ F    +  L P+++ +  +I G CK G   +A ++ + M+  G
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 198 IMPDGLLLSTLAD 210
             P+    + L D
Sbjct: 303 WKPNVYTHTALID 315



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 32/156 (20%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E +L  ALK F +++D G   D ITY  +I G C  ++LDEA  L++ +    L P  +
Sbjct: 530 REGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEV 589

Query: 64  T--------------------------------FTILIDAFCKEGRMDDATMMFSKMLEK 91
           T                                   L+   C E ++  A + F K+L+K
Sbjct: 590 TRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDK 649

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            P  N VT +  +   ++S       D+   + + N
Sbjct: 650 DPNVNRVTIAAFMTACYESNKYDLVSDLSARIYKEN 685



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A+++ +K  EK  +       C++  + +   +K A ++  EM    ++P+  + + ++ 
Sbjct: 120 ASLISNKNFEKAHEV----MQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVK 175

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            + + GL+E A   F       + P+ V+Y +++ GYCK G   E+ +    M+  G + 
Sbjct: 176 IVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVV 235

Query: 201 DGLLLS 206
           D   LS
Sbjct: 236 DNATLS 241


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 126/207 (60%), Gaps = 4/207 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ LF ++  +G++  ++TYN+++ G C   + ++   L + +   ++ PN ITF +
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D F KEG++ +A  ++ +M+ +G   N++TY+ L+DGY     +  A ++ + M  N 
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+IV+++ LI G C    +++ +  F       L+ + VTY+IL++G+C++G+   A 
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 188 QLYDSMLRNGIMPD----GLLLSTLAD 210
           +L+  M+ +G++PD    G+LL  L D
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCD 440



 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 121/201 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ P+IITYNT++ GYC  NRL EA  + + +   +  P
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT LI  +C   R+DD   +F  + ++G  AN VTYS L+ G+ +S  +K A +++
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  + + P++++Y IL+DGLC  G +E+AL  F     + +   +V Y  +I G CK 
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A  L+ S+   G+ P+
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPN 497



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 116/205 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ +R ++ D+ TY+TII   C    +D A+ LF+++    +K + +T+  L+ 
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+ +D  ++   M+ +    NV+T++ L+D + K   ++ A ++Y+EM    ISP
Sbjct: 262 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ L+DG C +  + EA       + N   PD+VT+  LI+GYC   R  + M+++
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
            ++ + G++ + +  S L     QS
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQS 406



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A+ L  ++ + G +PD++TYN+I+ G C       A+ L  K+    +K +
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ +ID+ C++G +D A  +F +M  KG K++VVTY+ L+ G  K+        + +
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I PN++++++L+D   K G ++EA   +   +   + P+++TY  L+ GYC   
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 337

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R +EA  + D M+RN   PD +  ++L
Sbjct: 338 RLSEANNMLDLMVRNKCSPDIVTFTSL 364



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 116/212 (54%), Gaps = 1/212 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G++   G EPD  T+NT+I G     ++ EAV L +++     +P+ +T+  +++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ G    A  +  KM E+  KA+V TYS +ID   +   + +A  +++EM    I  
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ L+ GLCK G   +        +   ++P+V+T+ +L+  + K G+  EA +LY
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 191 DSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
             M+  GI P+ +  +TL D Y +Q+  S+ +
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           QL   G+  +I T N +I  +C   +   A  +  K+  +  +P++ TF  LI     EG
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++ +A ++  +M+E G + +VVTY+ +++G  +S +   A D+  +M E N+  ++ +YS
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            +ID LC+ G ++ A+  F       +   VVTY  L+RG CKAG+  +   L   M+  
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
            I+P+ +  + L D  ++    QE
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQE 306



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 89/190 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF ++      P ++ ++          + +  +   ++L    +  N  T  I+
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  +   A  +  K+++ G + +  T++ LI G F    +  A  + + M EN  
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ +++G+C+ G    AL       + ++  DV TY+ +I   C+ G    A+ 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 189 LYDSMLRNGI 198
           L+  M   GI
Sbjct: 240 LFKEMETKGI 249



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSC 102
           D+A+ LF+++   +  P+ + F+    A  +  + +   + F K LE  G   N+ T + 
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN-LVLDFCKQLELNGIAHNIYTLNI 118

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           +I+ + +      A+ V  ++ +    P+  +++ LI GL   G + EA+      ++N 
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             PDVVTY  ++ G C++G  + A+ L   M    +  D    ST+ D
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 226



 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           A +L +++    + PN+IT++ LID FCKE R+D+A  M   M+ KG
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 43.9 bits (102), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 29/42 (69%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE 51
            A +L  ++  RG+ P+ ITY+++I G+C  NRLDEA Q+ +
Sbjct: 717 TAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLD 758



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 27/37 (72%)

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +A ++++EM +  I+PN ++YS LIDG CK   ++EA
Sbjct: 717 TAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEA 753


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 124/210 (59%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F +  +RG  P+++TY+T+I G   + ++DEA+QL  K+  +  + N
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T++ ++D   K GRM+DA ++  +M + G   + VTY+ LIDG+FK Q ++ A  +  
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++V+Y+ L  GLC+ G  +EA+            P+ +TY+ ++ G CKAG
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 697

Query: 182 RPTEAMQLYDSMLRNGIM-PDGLLLSTLAD 210
           R TEA+  ++ M R+ ++ P  +  S L D
Sbjct: 698 RVTEALGYFEKMARDEVVAPHVIAYSALID 727



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 114/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L   + + GL PD+IT+N+++ G C   R+ +A  +F++      +PN +T++ LID
Sbjct: 492 ALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 551

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K  +MD+A  + +KM+E G +AN VTYS ++DG  K   M+ A  V  +M +    P
Sbjct: 552 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ LIDG  KR  + EA+      L+    P VVTY  L  G C++GR  EA+++ 
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G  P+ +  S++ D
Sbjct: 672 DYMAARGCAPNAITYSSIVD 691



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 100/185 (54%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P ++TYNT++ G      + +A+ L E +    L P+ ITF  ++D  CKE R+ DA  
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F + LE+G + NVVTYS LIDG  K   M  A  +  +M E     N V+YS ++DGL 
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G ME+A+       D   LPD VTY  LI G+ K  R  EA+ L   ML  G  P  +
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649

Query: 204 LLSTL 208
             +TL
Sbjct: 650 TYTTL 654



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 29/229 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++AA ++  ++ DRG  PD+  +  ++   C L R+DEA   F+++  +   P+
Sbjct: 116 LCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD 175

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  ++D   K GR++ A M+   + E      V T++  +DG  K+ N+  A++ ++
Sbjct: 176 AVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL------------YAF----HCALDNHLL- 164
            M +  +SPN V+Y  LIDGLCK G ++ AL            +AF    H     H L 
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLE 295

Query: 165 ------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                       P+VV +  L+ G C+A R  EA +L+D M  +G   D
Sbjct: 296 EAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSAD 344



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 92/184 (50%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++TYN +I G C   R+ +A   F K      +P  +T++ +ID  C++  +D    +  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  +G   N VTY+ L++        K AF + E M  N   P ++++ ++I GLCK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +E A       +D   +PDV  + +L+   C+ GR  EA   +  +L  G  PD +  +
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 207 TLAD 210
           T+ D
Sbjct: 181 TMVD 184



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 4/220 (1%)

Query: 2   LIKECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +  AL  F ++  D  + P +I Y+ +I G C   R+DEA +  E++      P
Sbjct: 693 LCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIP 752

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF+ILI+  C  GR+D    +F  M E+G KA++  Y+ +I+ Y       +A+ + 
Sbjct: 753 DVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALL 812

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM  + I+ N V++ I+I  LC    ++EA+  FH   ++    D ++Y  LI     +
Sbjct: 813 EEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVAS 870

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            R  +A++L  +M+ +G  PD     T+ D  L  +GS E
Sbjct: 871 RRSEQALELLRAMVADGGSPDACNYMTVMD-GLFKAGSPE 909



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   F +    G  P ++TY+T+I G C  N +D+  +L E++      PN++T+  L++
Sbjct: 20  AFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVN 79

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A   +GR  +A  +  +M   G    ++T+  +I G  K   +++AF V +EM +    P
Sbjct: 80  ALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVP 139

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  +++L+  LC+ G ++EA + F   L     PD VTY  ++ G  KAGR  EA  + 
Sbjct: 140 DVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGR-LEAAGMV 198

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGS 218
             +L        +   T+A   L  +G+
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGN 226



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D   KL  ++  RG  P+ +TYNT++       R  EA  L E++      P 
Sbjct: 46  LCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPE 105

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF ++I   CKEG ++ A  +  +M+++G   +V  ++ L+    +   +  A+  ++
Sbjct: 106 LITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQ 165

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++     +P+ V+Y+ ++DGL K G +E A        ++   P V T+ I + G  KAG
Sbjct: 166 QVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAG 225

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             T A + +DSM + G+ P+ +    L D
Sbjct: 226 NLTGAYEFFDSMPQTGVSPNTVTYDALID 254



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 23/227 (10%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITF 65
            +D A +LF  + + G   D+ITYN ++ G C L R+ EA +  E +   +   PN +TF
Sbjct: 325 RVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTF 384

Query: 66  TILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + LI   C  GR++ A  ++ +M+  +G   N  TY+ L++G  K+ + +     +E+M 
Sbjct: 385 STLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444

Query: 125 ENNI---------------------SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           E                         P +V+Y+ L+ GL K G++ +AL      +++ L
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            PDV+T+  ++ G CK  R  +A  ++   L  G  P+ +  STL D
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 551



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 100/188 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ +     A  L  ++   G  P++IT+  II G C    ++ A ++ +++      P+
Sbjct: 81  LLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPD 140

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               T+L+ A C+ GR+D+A   F ++L  G   + VTY+ ++DG +K+  +++A  V +
Sbjct: 141 VEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQ 200

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + E+  SP + +++I +DGL K G +  A   F       + P+ VTY  LI G CKAG
Sbjct: 201 LLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAG 260

Query: 182 RPTEAMQL 189
           +   A+ L
Sbjct: 261 KLDIALGL 268



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 2/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  L+LF  + +RG + DI  YN +I  YC       A  L E++    +  N++T  
Sbjct: 769 RIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHG 828

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I A C   R+D+A   F  + E     + ++Y+ LI     S+  + A ++   M  +
Sbjct: 829 IVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRAMVAD 886

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SP+  +Y  ++DGL K G  E A             PD+ TY I+I G  KA +   A
Sbjct: 887 GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
              ++ MLR  + PD ++ S+L D
Sbjct: 947 CDYFEEMLRKNLKPDAIVYSSLID 970



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 14/205 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A + F  +   G+ P+ +TY+ +I G C   +LD A+ L         +  
Sbjct: 221 LSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNS---QAG 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
              F+ L+   C+  R+++A  +   M    P   NVV ++ L++G  +++ +  AF+++
Sbjct: 278 MFAFSSLLHGLCQAHRLEEAIQLLKAM----PCVPNVVCFNSLMNGLCQARRVDEAFELF 333

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL---LPDVVTYAILIRGY 177
           + M E+  S ++++Y+IL+ GLCK   + EA    H  L        P+VVT++ LI+G 
Sbjct: 334 DVMKESGCSADVITYNILLKGLCKLRRIPEAYR--HVELMRRTEGCSPNVVTFSTLIQGL 391

Query: 178 CKAGRPTEAMQLYDSMLR-NGIMPD 201
           C AGR  +A ++Y+ M+   GI P+
Sbjct: 392 CNAGRVNQAWEVYERMVAVEGISPN 416



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 21/210 (10%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--------------------CVQL-KP 60
           G+ P+  TY  ++ G C         Q FE++                      VQ+ +P
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +T+  L+    K G + DA  +   M+E G   +V+T++ ++DG  K Q +  A +V+
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +   E    PN+V+YS LIDGL K   M+EAL      ++     + VTY+ ++ G  K 
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  +A+ +   M   G +PD +  +TL D
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 3/151 (1%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K    + A KL  ++  RG  PD+ TY  +I G     +L  A   FE++    LKP+
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +I ++ LIDAFCK  ++DDA   +  +   G +  +  YS ++D   K++    A +V  
Sbjct: 962  AIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            EM   N  P I  ++ L       G ++EA+
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAV 1049



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 3/184 (1%)

Query: 26   DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
            D I+YNT+I    +  R ++A++L   +      P++  +  ++D   K G  + A  + 
Sbjct: 856  DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915

Query: 86   SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             +M  +G   ++ TY+ +I G  K++ +  A D +EEM   N+ P+ + YS LID  CK 
Sbjct: 916  QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975

Query: 146  GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
              +++A         + + P +  Y+ ++   CK     +A+++   M      P   + 
Sbjct: 976  DKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIW 1032

Query: 206  STLA 209
            ++LA
Sbjct: 1033 TSLA 1036



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 3/192 (1%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+     + AL+L   +   G  PD   Y T++ G       + A +L +++      P+
Sbjct: 867  LVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPD 926

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              T+TI+I    K  ++  A   F +ML K  K + + YS LID + K+  +    D ++
Sbjct: 927  LRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD---DAWK 983

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             +  + I P I  YS ++D LCK    ++AL         +  P +  +  L   Y   G
Sbjct: 984  LLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEG 1043

Query: 182  RPTEAMQLYDSM 193
            R  EA++L + +
Sbjct: 1044 RVDEAVKLVNDL 1055



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%)

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +V+Y++LI+GLCK G + +A  AF  A+     P VVTY+ +I G C+     +  +L +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 192 SMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            M   G  P+ +  +TL +  L    ++E
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKE 89


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 123/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A +L+ ++  + + PD++T+N++I G+C + +L EA  LF ++    + P+
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+IL+DA CK+G +  A  M + M+++G   +VVTYS L+DGY     +  A  V+ 
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++P+  SY+I+I+GL K  +++EAL  F       + PD VTY  LI G CK G
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R + A QL D M  NGI  D L  ++L D
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLID 417



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F  ++  G+ P   +YN +I G   +  +DEA+ LF+++ C  + P+++T+  
Sbjct: 320 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+  A  +  +M   G  A+++TY+ LID   K+ ++  A  + +++ +  
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ +Y+ILIDGLCK G ++ A   F   L      +  TY I+I G CK G   EA 
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAE 499

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M  NGI+PD +   T+
Sbjct: 500 VLLSKMENNGIIPDAVTYETI 520



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 110/192 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++  +G+ PD +TYN++I G C L R+  A QL +++    +  + +T+  
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK   +D A  +  K+ ++G + ++ TY+ LIDG  K   +K+A DV++++    
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            S N  +Y+I+I+GLCK GL  EA        +N ++PD VTY  +IR   +     +A 
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAE 534

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 535 KLLREMIIRGLL 546



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     A  +F ++   G  P  IT+NT+I G C   +L EA+   + +  +    + 
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  LI+  CK G    A  M  K+  K    +VV Y+ +I+   K + +  A+ +Y E
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP++V+++ LI G C  G ++EA   FH  +  ++ PDV T++IL+   CK G 
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            T A  +   M++ G++PD +  S+L D
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMD 312



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 106/193 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL     +   G   D ++Y T+I G C +     A+Q+ +K+    +  + + + I
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ CK+  + DA  ++S+M+ K    +VVT++ LI G+     +K AF ++ EM   N
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ ++SIL+D LCK G +  A       +   ++PDVVTY+ L+ GYC      +A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 188 QLYDSMLRNGIMP 200
            ++ +M R G+ P
Sbjct: 325 HVFSTMSRLGVAP 337



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 112/196 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++  A  +   +  +G+ PD++TY++++ GYC +N +++A  +F  ++ + + P+
Sbjct: 279 LCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++ I+I+   K   +D+A  +F +M  KG   + VTY+ LIDG  K   +  A+ + +
Sbjct: 339 AHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVD 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N I  +I++Y+ LID LCK   +++A+       D  + P + TY ILI G CK G
Sbjct: 399 EMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGG 458

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A  ++  +L  G
Sbjct: 459 RLKNAQDVFQDLLIKG 474



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 2/186 (1%)

Query: 25  PDIITYNTIICGYCSLN--RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           P I+ +N I+      N      A+ L  +L    + P  +TF IL++ +C  G M  A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F+K+L+ G     +T++ LI+G   +  +K A   ++ +       + VSY  LI+GL
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK G    AL          +  DVV Y I+I   CK    ++A QLY  M+   I PD 
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 203 LLLSTL 208
           +  ++L
Sbjct: 235 VTFNSL 240



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 82/150 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L  ++ + G+  DI+TYN++I   C  + +D+A+ L +K+    ++P+
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILID  CK GR+ +A  +F  +L KG   N  TY+ +I+G  K      A  +  
Sbjct: 444 MYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLS 503

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M  N I P+ V+Y  +I  L ++   E+A
Sbjct: 504 KMENNGIIPDAVTYETIIRALFRKDENEKA 533



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 66/123 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K  H+D A+ L  ++ D+G++P + TYN +I G C   RL  A  +F+ L       
Sbjct: 418 VLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSV 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+ I+I+  CKEG  ++A ++ SKM   G   + VTY  +I   F+    + A  + 
Sbjct: 478 NAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLL 537

Query: 121 EEM 123
            EM
Sbjct: 538 REM 540



 Score = 39.7 bits (91), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +F  L  +G   +  TYN +I G C     +EA  L  K+    + P+
Sbjct: 454 LCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++T+  +I A  ++   + A  +  +M+ +G
Sbjct: 514 AVTYETIIRALFRKDENEKAEKLLREMIIRG 544


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 114/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A+KL  ++ +RG  P+++TYN ++   C L+ +  A  + +K+      PN +TF 
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D FCK G +DDA  +   M+ KG + NVVTYS LIDG  KSQ    A +V EEM   
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P+  +YS LI GLCK   +EEA         +   PDVV Y+ +I  +CK+G+  EA
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 373

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +    M +    PD +  +T+ D
Sbjct: 374 QKTLQEMRKQRKSPDVVTYNTVID 397



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 118/208 (56%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D A KL G +  +G+ P+++TY+ +I G C   +  EA ++ E++    + P++ 
Sbjct: 261 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI   CK  ++++A  M  +M   G   +VV YS +I  + KS  +  A    +EM
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            +   SP++V+Y+ +IDGLCK G + EA        ++  +LPDVVTY+ +I G CK+  
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +L D M + G  PD +  +T+ D
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIID 468



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 111/201 (55%), Gaps = 3/201 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L AAL+L  ++   G  PD  T+  II    +   LD A+     + C    PN +T+T 
Sbjct: 128 LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC---DPNVVTYTA 184

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI AF +  ++++A  +  +M E+G   N+VTY+ L+D   K   + +A DV ++M E  
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+++++ L+DG CKRG +++A       +   + P+VVTY+ LI G CK+ +  EA 
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++ + M   G+ PD    S L
Sbjct: 305 EVLEEMKTRGVTPDAFTYSAL 325



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 3/201 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+     L   G +P+++TY  +I  +    +L+EA++L E++      PN +T+ +
Sbjct: 163 LDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA CK   +  A  +  KM+E G   NV+T++ L+DG+ K  N+  A  +   M    
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V+YS LIDGLCK     EA           + PD  TY+ LI G CKA +  EA 
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q+   M  +G  PD ++ S++
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSI 360



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 118/210 (56%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A ++  ++   G  PD++ Y++II  +C   +L EA +  +++   +  P+
Sbjct: 329 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPK-ANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+  +ID  CK G++ +A ++  +M E G    +VVTYS +I+G  KS  +  A  + 
Sbjct: 389 VVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 448

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + MC+   +P++V+Y+ +IDGLCK G +EEA Y           P+VVTY  LI G CKA
Sbjct: 449 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA ++ + M   G  P+ +  +T+ +
Sbjct: 509 RKVDEAERVMEEMRNAGCPPNLVTYNTMVN 538



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++  ++  RG+ PD  TY+ +I G C  ++++EA Q+  ++      P+ + ++ +I 
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NIS 129
           AFCK G++ +A     +M ++    +VVTY+ +IDG  K   +  A  + E+M E+ ++ 
Sbjct: 363 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVL 422

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+YS +I+GLCK  ++ EA             PDVVTY  +I G CK GR  EA  L
Sbjct: 423 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 482

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              M R G  P+ +  +TL
Sbjct: 483 LQGMKRAGCAPNVVTYTTL 501



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA  +  ++ + G  P+++T+N+++ G+C    +D+A +L   +    ++PN
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK  +  +A  +  +M  +G   +  TYS LI G  K+  ++ A  +  
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +  +P++V YS +I   CK G + EA             PDVVTY  +I G CK G
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403

Query: 182 RPTEAMQLYDSMLRNG-IMPDGLLLSTL 208
           +  EA  + + M  +G ++PD +  ST+
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTV 431



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EPD+ +YN +I G+C+   L  A++L E++      P++ T T +I A    G +D A  
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
               M   G   NVVTY+ LI  + +++ ++ A  + EEM E    PN+V+Y++L+D LC
Sbjct: 169 HLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K  ++  A       ++    P+V+T+  L+ G+CK G   +A +L   M+  G+ P+ +
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285

Query: 204 LLSTLAD 210
             S L D
Sbjct: 286 TYSALID 292



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 2/171 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TY+T+I G C  + L EA +L +++      P+ +T+T +ID  CK GR+++A  +
Sbjct: 423 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 482

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M   G   NVVTY+ LI G  K++ +  A  V EEM      PN+V+Y+ +++GLC 
Sbjct: 483 LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCV 542

Query: 145 RGLMEEALYAFHCALDNHL--LPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            G ++EA        D      PD  TY  ++     +    EA QL + M
Sbjct: 543 SGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KL  ++   G  PD++TY TII G C   RL+EA  L + +      PN
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI   CK  ++D+A  +  +M   G   N+VTY+ +++G   S  +K A  + +
Sbjct: 495 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 554

Query: 122 EMCENNI--SPNIVSYSILIDGLCKRGLMEEA 151
            M +     SP+  +Y  +++ L    L++EA
Sbjct: 555 RMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586



 Score = 42.7 bits (99), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 32/144 (22%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG-------LMEEA 151
           +++ L+    + +  + A D++      +  P++ SY+I+I G C  G       L+EE 
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 152 ---------------LYAFHCALD-----NHLL-----PDVVTYAILIRGYCKAGRPTEA 186
                          + A   A D     +HL      P+VVTY  LI  + +A +  EA
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M+L + M   G  P+ +  + L D
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVD 222


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 119/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A+ +  ++   G++PD +T+ T+I G C+  R+ EAV+LF ++      PN++TFT
Sbjct: 136 HIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFT 195

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  CK+G + +A  +F  M EKG + N+ TY+ L++GY     M  A  V+E M   
Sbjct: 196 ILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGK 255

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P++ SYSILI+G CK   ++EA        +  L+P+ VTY  L++G C A    EA
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEA 315

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L+  M  +G++P+    S L D
Sbjct: 316 QELFKKMCSSGMLPNLRTYSILLD 339



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 129/219 (58%), Gaps = 9/219 (4%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+  +  A  +F  +T++G+EP+I TYN ++ GYC    +++A ++FE +      P
Sbjct: 200 VLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAP 259

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  +++ILI+ +CK  R+D+A  + ++M EK    N VTY+ L+ G   + ++  A +++
Sbjct: 260 SVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELF 319

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++MC + + PN+ +YSIL+DGLCK G +EEAL       +  L PD+V Y ILI+G   A
Sbjct: 320 KKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIA 379

Query: 181 GRPTEAMQLYDSMLRNGIMPD---------GLLLSTLAD 210
           G+   A +L+  +  NGI P          GLL   L+D
Sbjct: 380 GKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSD 418



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 119/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  Q++++ L P+ +TYNT++ G C  + L EA +LF+K+    + PN  
Sbjct: 273 KSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLR 332

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  CK G +++A  + + M E+  + ++V Y+ LI G F +  ++ A +++ ++
Sbjct: 333 TYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKL 392

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I P++ +Y+I+I GL K GL +EA   F    D+  LPD  +Y ++I+G+ +   P
Sbjct: 393 FANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDP 452

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A+QL D M+      D      L D
Sbjct: 453 STAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+F  +  +G  P + +Y+ +I GYC   R+DEA  L  +++  +L PN++T+  
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C    + +A  +F KM   G   N+ TYS L+DG  K  +++ A  +   M E  
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+IV Y+ILI G+   G +E A   F     N + P V TY I+I+G  K G   EA 
Sbjct: 362 LEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAY 421

Query: 188 QLYDSMLRNGIMPD 201
           +L+  M  +G +PD
Sbjct: 422 KLFRKMEDDGFLPD 435



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K+      + L  Q+   G+  +  T N +I   C L+ +  AV +  K+  + ++P+
Sbjct: 96  IAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPD 155

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+TFT LI+  C EGR+ +A  +F++M  +    N VT++ L+D   K   +  A  V+E
Sbjct: 156 SVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFE 215

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + PNI +Y+ L++G C R  M +A   F   +     P V +Y+ILI GYCK+ 
Sbjct: 216 TMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSR 275

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  L   M    ++P+ +  +TL
Sbjct: 276 RIDEAKALLTQMSEKELIPNTVTYNTL 302



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 94/193 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F ++      P  +     +       +    V L  ++    +  N  T  I
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++ C+   +  A  + SKM + G + + VT++ LI+G      +K A +++ EM   +
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V+++IL+D LCK+G++ EA   F    +  + P++ TY  L+ GYC      +A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 188 QLYDSMLRNGIMP 200
           ++++ M+  G  P
Sbjct: 247 KVFEIMVGKGCAP 259



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 79/139 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ ALKL   + +R LEPDI+ YN +I G     +L+ A +LF KL    ++P+
Sbjct: 341 LCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPS 400

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I    KEG  D+A  +F KM + G   +  +Y+ +I G+ ++Q+  +A  + +
Sbjct: 401 VRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLID 460

Query: 122 EMCENNISPNIVSYSILID 140
           EM     S +  ++ +L+D
Sbjct: 461 EMVGRRFSADSSTFKMLLD 479



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 86/170 (50%), Gaps = 4/170 (2%)

Query: 36  GYCSLNR----LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           G+ S N     +D+A+  F ++  +  +P+ +     + +  K+ +      + ++M   
Sbjct: 56  GFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLF 115

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   N  T + LI+   +  ++  A  V  +M +  I P+ V+++ LI+GLC  G ++EA
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +  F+       +P+ VT+ IL+   CK G  +EA  ++++M   G+ P+
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPN 225


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 126/216 (58%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD AL+LF  + ++ L PDI+TYNT+I G C    LD+A  L++ +   ++ PN +T
Sbjct: 99  EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 158

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ILID+ C++G+++DA     +M+ KG   N++TY+ +I GY +S N+       ++M 
Sbjct: 159 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 218

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N +SP++++Y+ LI G  K   M +A    +      + PDVVTY +LI G+   G   
Sbjct: 219 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 278

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           EA  +++ M   GI PD     ++ + ++ +  S+E
Sbjct: 279 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 314



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 119/198 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  ++   G  PD++TYNT++ G C   RL +A  L  ++    + P+  TFT LI 
Sbjct: 35  ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 94

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C EG++D A  +F  ML +  + ++VTY+ LIDG  +  ++  A D++++M    I P
Sbjct: 95  GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 154

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+YSILID  C++G +E+A       ++  +LP+++TY  +I+GYC++G  ++  +  
Sbjct: 155 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 214

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+ N + PD +  +TL
Sbjct: 215 QKMMVNKVSPDLITYNTL 232



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  ++ +RG+ PD+ T+ T+I GYC   +LD+A+QLF+ +   +L+P+
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  C++G +D A  ++  M  +    N VTYS LID + +   ++ AF   +
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I PNI++Y+ +I G C+ G + +        + N + PD++TY  LI GY K  
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  +A +L + M +  + PD      +  YN+  +G   H
Sbjct: 241 KMHDAFKLLNMMEKEKVQPD------VVTYNMLINGFSVH 274



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 104/180 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL PD + Y  +I G+C    + +A+++ +++      P+ +T+  L++  CKE R+ DA
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + ++M E+G   ++ T++ LI GY     +  A  +++ M    + P+IV+Y+ LIDG
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +C++G +++A   +       + P+ VTY+ILI  +C+ G+  +A    D M+  GI+P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 88/161 (54%)

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
             ++ C  L P+ + +T++I  FC+ G M DA  +  +M+  G   +VVTY+ L++G  K
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
            + +  A  +  EM E  + P++ +++ LI G C  G +++AL  F   L+  L PD+VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           Y  LI G C+ G   +A  L+D M    I P+ +  S L D
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 164


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 124/205 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L    KLF Q   +G++ D++ +++ I  Y     L  A  +++++ C  + PN +
Sbjct: 225 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVV 284

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI   C++GR+ +A  ++ ++L++G + +VVTYS LIDG+ K  N++S F +YE+M
Sbjct: 285 TYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDM 344

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P++V Y +L+DGLCK+GLM  AL      L   + P+VV +  LI G+C+  R 
Sbjct: 345 IKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRC 404

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA++++  M   GI PD   ++TL
Sbjct: 405 DEALKVFRLMGIYGIKPDVATITTL 429



 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 116/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A ++   + D G  P+++T+ T+I G+C    +D A +LF+ +    + P+ I ++
Sbjct: 158 QIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYS 217

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID + K G +     +FS+ L KG K +VV +S  ID Y K   + +AFDVY+ M   
Sbjct: 218 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQ 277

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+Y+ILI GLC+ G + EA   +   L   L P VVTY+ LI G+CK G     
Sbjct: 278 GISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSG 337

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             LY+ M++ G  PD ++   L D
Sbjct: 338 FALYEDMIKMGYPPDVVIYGVLVD 361



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 66/279 (23%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D ALK+F  +   G++PD+ T  T++       RL E + LF ++  + L+P+++ F  L
Sbjct: 405 DEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTL 464

Query: 69  IDAFCKEGR-----------------------------------MDDATMMFSKMLEKGP 93
           +DAFCK  +                                   +++A+  F+ +LE   
Sbjct: 465 MDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKM 524

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI-------------- 139
           + ++VTY+ +I GY   + +  A  ++E +      PN V+ +ILI              
Sbjct: 525 EPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALR 584

Query: 140 -------------DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
                        DGLCKRG ++EA   FH A+D  +LPDVV YAILIRG CK GR  EA
Sbjct: 585 IISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEA 644

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYN----LQSSGSQEH 221
             LY+ MLRNG+ PD LL   L++Y     L S G   H
Sbjct: 645 ALLYEHMLRNGVKPDDLLQRALSEYKPPKWLMSKGVWVH 683



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 108/207 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +LF  +  RG+ PD+I Y+T+I GY     L    +LF +     +K + +
Sbjct: 190 KRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 249

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+  ID + K G +  A  ++ +ML +G   NVVTY+ LI G  +   +  AF +Y ++
Sbjct: 250 VFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQI 309

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++V+YS LIDG CK G +      +   +     PDVV Y +L+ G CK G  
Sbjct: 310 LKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLM 369

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A++     L   I P+ ++ ++L D
Sbjct: 370 LHALRFSVKTLGQSIRPNVVVFNSLID 396



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++ Q+  RGLEP ++TY+++I G+C    L     L+E +  +   P+ + + +L+D
Sbjct: 302 AFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 361

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G M  A     K L +  + NVV ++ LIDG+ +      A  V+  M    I P
Sbjct: 362 GLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKP 421

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ + + L+      G ++E L+ F       L PD V +  L+  +CK  +PT  +QL+
Sbjct: 422 DVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLF 481

Query: 191 DSMLRNGIMPD 201
           D M RN I  D
Sbjct: 482 DLMQRNKIPAD 492



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 107/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K  +L  A  ++ ++  +G+ P+++TY  +I G C   R+ EA  ++ ++    L+P+ 
Sbjct: 259 VKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSV 318

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ LID FCK G +     ++  M++ G   +VV Y  L+DG  K   M  A     +
Sbjct: 319 VTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVK 378

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I PN+V ++ LIDG C+    +EAL  F       + PDV T   L+R     GR
Sbjct: 379 TLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGR 438

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             E + L+  M + G+ PD +   TL D
Sbjct: 439 LKEGLFLFFRMFKMGLEPDAVAFCTLMD 466



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL+   +   + + P+++ +N++I G+C LNR DEA+++F  +    +KP+
Sbjct: 363 LCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPD 422

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T T L+     EGR+ +   +F +M + G + + V +  L+D + K+        +++
Sbjct: 423 VATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFD 482

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I  +I   +++I+ L K   +EEA   F+  L+  + PD+VTY  +I GYC   
Sbjct: 483 LMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLR 542

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA ++++ +      P+ + L+ L
Sbjct: 543 RLDEAARIFEMLKFTPFGPNAVTLTIL 569



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA  ++G +  A      ++E+G + ++V+ + ++ G    Q ++ A  +   + +  
Sbjct: 115 VLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVDQ-IEVASRMLSLVLDCG 173

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V++  LI+G CKRG M+ A   F       + PD++ Y+ LI GY KAG      
Sbjct: 174 PAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGH 233

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+   L  G+  D ++ S+  D
Sbjct: 234 KLFSQALHKGVKLDVVVFSSTID 256



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F Q  D  + PD++ Y  +I G C + RL EA  L+E +    +KP+
Sbjct: 600 LCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659

Query: 62  SI 63
            +
Sbjct: 660 DL 661


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 123/203 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ Q+  + + PD+ TYN +I G+ ++++L+ A+ LF K+    + PN  TF I
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCKEG+++DA ++ + M++   K +VVTY+ L+DGY     +  A D+++ M    
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N+  Y+ +++G CK  +++EA+  F       ++P+VVTY+ LI G CK GR   A+
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L D M   G  P+ +  S++ D
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILD 419



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 119/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL    ++  +G   D ++Y T+I G C + R+  A+QL +++    ++PN++ + 
Sbjct: 146 HIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 205

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK   ++DA  ++S+M+ K    +V TY+ LI G+     +  A D++ +M + 
Sbjct: 206 MIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE 265

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI+PN+ +++IL+DG CK G + +A       + + + PDVVTY  L+ GYC   +  +A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++DSM   G++ +  + +T+ +
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVN 349



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 111/195 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F  +   G+  ++  Y T++ G+C +  +DEA+ LFE++ C ++ PN +T++ 
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+  A  +  +M ++G   N+VTYS ++D   K+ ++  A  +   + +  
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ +Y+ILI GLC+ G +E+A   F   L      DV  Y ++I+G+C  G   +A+
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501

Query: 188 QLYDSMLRNGIMPDG 202
            L   M  NG +P+ 
Sbjct: 502 ALLSKMEDNGCIPNA 516



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 114/194 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A  +   +    ++PD++TYN+++ GYCS+N++++A  +F+ +    +  N  
Sbjct: 283 KEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQ 342

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +++ FCK   +D+A  +F +M  +    NVVTYS LIDG  K   +  A  + +EM
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEM 402

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PNIV+YS ++D LCK   +++A+       D  + PD+ TY ILI+G C++GR 
Sbjct: 403 HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRL 462

Query: 184 TEAMQLYDSMLRNG 197
            +A  +++ +L  G
Sbjct: 463 EDAQNVFEDLLVKG 476



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AAL+L  ++  + ++P+ + YN II   C    +++A  L+ ++   ++ P+
Sbjct: 176 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI  F    +++ A  +F+KM ++    NV T++ L+DG+ K   +  A  V  
Sbjct: 236 VFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLA 295

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +++I P++V+Y+ L+DG C    + +A   F       ++ +V  Y  ++ G+CK  
Sbjct: 296 IMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA+ L++ M    I+P+ +  S+L D
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLID 384



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 109/192 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  R + P+++TY+++I G C L R+  A++L +++      PN +T++ 
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK   +D A  + + + ++G + ++ TY+ LI G  +S  ++ A +V+E++    
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + ++ +Y+++I G C +G  ++AL       DN  +P+  TY ++I    +      A 
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAE 536

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 537 KLLREMIVRGLL 548



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 100/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   AL L  Q+   G+E D  T+N +I  +  L     +  +F K+      P 
Sbjct: 71  LVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPT 130

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITF  LI   C +G +  A     K++ +G   + V+Y  LI+G  K   + +A  + +
Sbjct: 131 AITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLK 190

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    + PN V Y+++ID +CK  L+ +A   +   +   + PDV TY  LI G+    
Sbjct: 191 RVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVS 250

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A+ L++ M +  I P+    + L D
Sbjct: 251 KLNYAIDLFNKMKKENINPNVYTFNILVD 279



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  +   P    +N I+           A+ L +++    ++ +  TF ILI+ F + G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              +  +F+K+L+KG     +T++ LI G     ++  A   ++++       + VSY  
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI+GLCK G +  AL          + P+ V Y ++I   CKA    +A  LY  M+   
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 198 IMPD 201
           I PD
Sbjct: 232 ICPD 235



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 61/122 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A+ L   L D+G+ PD+ TY  +I G C   RL++A  +FE L       +
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T++I  FC +G  D A  + SKM + G   N  TY  +I   F+     +A  +  
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLR 540

Query: 122 EM 123
           EM
Sbjct: 541 EM 542



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 58/123 (47%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           +L K P      ++ ++    K+++  +A  ++++M  N I  +  +++ILI+   + GL
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
              +   F   L     P  +T+  LI+G C  G   +A+  +D ++  G   D +   T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 208 LAD 210
           L +
Sbjct: 172 LIN 174



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 44/91 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L+ A  +F  L  +G   D+  Y  +I G+C     D+A+ L  K+      PN
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           + T+ ++I +  ++   D A  +  +M+ +G
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRG 546


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 127/210 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A ++  ++ ++G+ PD + Y T+I G+C L  +  A +LF+++   ++ P
Sbjct: 54  LLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVP 113

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I +T +I   C+ G+M +A  +F+KM  +G + + VTY+ LIDGY KS  M+ AF ++
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M ++ ++PN+V+Y+ L DGLCK G ++ A    H      L  ++ TY  L+ G CK+
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A++L + M   G+ PD +  +TL D
Sbjct: 234 GNIRQAVKLMEEMEVAGMYPDTITFTTLMD 263



 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 118/190 (62%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RG  PD+++Y+T+I GYC    L + ++L +++    LKPN  T+  +I   CK G++DD
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +  +M+ +G   + V Y+ LIDG+ K  N+++A+ +++EM +  I P+ ++Y+ +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLC+ G M EA   F+      + PD VTY  LI GYCK+G   +A  L++ M+++G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 201 DGLLLSTLAD 210
           + +  + LAD
Sbjct: 184 NVVTYTALAD 193



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 114/198 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F ++  RG+EPD +TY T+I GYC    +++A  L  ++    L PN +T+T L D
Sbjct: 134 ADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALAD 193

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G++D A  +  +M  KG + N+ TY+ L++G  KS N++ A  + EEM    + P
Sbjct: 194 GLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYP 253

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++++ L+D  CK G M +A       LD  L P V+T+ +L+ G+C +G   +  +L 
Sbjct: 254 DTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLL 313

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  GIMP+    ++L
Sbjct: 314 AWMLEKGIMPNTTTYNSL 331



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 4/199 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L  ++  +GL+ +I TYN+++ G C    + +AV+L E++    + P+
Sbjct: 195 LCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPD 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITFT L+DA+CK G M  A  +  +ML++G +  V+T++ L++G+  S  ++    +  
Sbjct: 255 TITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLA 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLME--EALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            M E  I PN  +Y+ L+   C R  M     +Y   CA    ++PD  TY ILI+G+CK
Sbjct: 315 WMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCA--RGVMPDSNTYNILIKGHCK 372

Query: 180 AGRPTEAMQLYDSMLRNGI 198
           A    EA  L+  M   G 
Sbjct: 373 ARNMKEAWFLHKEMAEKGF 391



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 102/198 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  L  Q+   GL P+++TY  +  G C L ++D A +L  ++    L+ N  
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++  CK G +  A  +  +M   G   + +T++ L+D Y K+  M  A ++  EM
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P ++++++L++G C  G++E+        L+  ++P+  TY  L++ YC     
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341

Query: 184 TEAMQLYDSMLRNGIMPD 201
               ++Y  M   G+MPD
Sbjct: 342 RCTTEIYKGMCARGVMPD 359



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A+KL  ++   G+ PD IT+ T++  YC    + +A +L  ++    L+P 
Sbjct: 230 LCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF +L++ FC  G ++D   + + MLEKG   N  TY+ L+  Y    NM+   ++Y+
Sbjct: 290 VITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYK 349

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            MC   + P+  +Y+ILI G CK   M+EA +      +        +Y  +I+G+ K  
Sbjct: 350 GMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKK 409

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + +EA +L++ M R G+  D  + +   D
Sbjct: 410 KISEARELFEEMRREGMAADAEIYNLFVD 438



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 92/186 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ DRGL+P +IT+N ++ G+C    L++  +L   +    + PN+ T+  L+ 
Sbjct: 274 AHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK 333

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C    M   T ++  M  +G   +  TY+ LI G+ K++NMK A+ +++EM E   + 
Sbjct: 334 QYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNL 393

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              SY+ +I G  K+  + EA   F       +  D   Y + +      G    A++L 
Sbjct: 394 TASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELC 453

Query: 191 DSMLRN 196
           D  + N
Sbjct: 454 DEAIEN 459



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 83/160 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   +L   + ++G+ P+  TYN+++  YC  N +    ++++ +    + P+S T+ I
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK   M +A  +  +M EKG      +Y+ +I G+FK + +  A +++EEM    
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
           ++ +   Y++ +D     G ME AL     A++N  L  +
Sbjct: 426 MAADAEIYNLFVDISYGEGNMETALELCDEAIENCFLNRI 465


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 16/220 (7%)

Query: 5   ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA---------------VQ 48
           +CH L  +L  FG+LT  G +PD++T+NT++ G C  +R+ EA               V 
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           LF+++  + L P  ITF  LI+  C EGR+ +A  + +KM+ KG   +VVTY  +++G  
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K  + KSA ++  +M E +I P++V YS +ID LCK G   +A Y F   L+  + P+V 
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           TY  +I G+C  GR ++A +L   M+   I PD L  + L
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +GL  D++TY TI+ G C +     A+ L  K+    +KP+ + ++ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G   DA  +FS+MLEKG   NV TY+C+IDG+        A  +  +M E  I+P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++++ LI    K G + EA       L   + PD VTY  +I G+CK  R  +A  ++
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M      PD +  +T+ D
Sbjct: 425 DLMAS----PDVVTFNTIID 440



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 105/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF Q+ + GL P +IT+NT+I G C   R+ EA  L  K+    L  + +T+  +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  + SKM E   K +VV YS +ID   K  +   A  ++ EM E  I+P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+ +IDG C  G   +A       ++  + PDV+T+  LI    K G+  EA +L 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D ML   I PD +  +++
Sbjct: 390 DEMLHRCIFPDTVTYNSM 407



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 108/199 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  +++ RGL  +  TYNT+I G+C ++ L+ A  LF+++    + P++IT  
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+  FC+  ++++A  +F  +       + V Y+ +I G  K   +  A+D++  +  +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++ +Y+++I G C +  + +A   FH   DN   PD  TY  LIRG  KAG   ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 187 MQLYDSMLRNGIMPDGLLL 205
           ++L   M  NG   D   +
Sbjct: 627 IELISEMRSNGFSGDAFTI 645



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 6/206 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D A  +F    D    PD++T+NTII  YC   R+DE +QL  +++   L  N+ 
Sbjct: 413 KHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FC+   ++ A  +F +M+  G   + +T + L+ G+ +++ ++ A +++E +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
             + I  + V+Y+I+I G+CK   ++EA   F C+L  H + PDV TY ++I G+C    
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSA 587

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            ++A  L+  M  NG  PD    +TL
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTL 613



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 72/282 (25%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ ++G+ P++ TYN +I G+CS  R  +A +L   +   ++ P+
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365

Query: 62  SITFTILIDA-----------------------------------FCKEGRMDDATMMFS 86
            +TF  LI A                                   FCK  R DDA  MF 
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425

Query: 87  KML-------------------------------EKGPKANVVTYSCLIDGYFKSQNMKS 115
            M                                 +G  AN  TY+ LI G+ +  N+ +
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+++EM  + + P+ ++ +IL+ G C+   +EEAL  F     + +  D V Y I+I 
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G CK  +  EA  L+ S+  +G+ PD      +  YN+  SG
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPD------VQTYNVMISG 581



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 4/199 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL L  ++ +  ++PD++ Y+ II   C      +A  LF ++    + PN  T+  +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D FC  GR  DA  +   M+E+    +V+T++ LI    K   +  A  + +EM    I 
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ V+Y+ +I G CK    ++A + F    D    PDVVT+  +I  YC+A R  E MQL
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              + R G++ +    +TL
Sbjct: 455 LREISRRGLVANTTTYNTL 473



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+  F  +         +  N +I  +  +NR D A+ L+ K+   ++  N  +F I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS------CLID---------GYFKSQN 112
           LI  FC   ++  +   F K+ + G + +VVT++      CL D         GY     
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
              A  ++++M E  ++P +++++ LI+GLC  G + EA    +  +   L  DVVTY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ G CK G    A+ L   M    I PD ++ S + D
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 8/160 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL+LF  +    ++ D + YN II G C  +++DEA  LF  L    ++P+  T+ +
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC +  + DA ++F KM + G + +  TY+ LI G  K+  +  + ++  EM  N 
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
            S +  +  +  + +C+  + +E +      ++N+L P +
Sbjct: 638 FSGDAFTIKMAEEIICR--VSDEEI------IENYLRPKI 669



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF  L   G+EPD+ TYN +I G+C  + + +A  LF K+     +P++ 
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           T+  LI    K G +D +  + S+M   G   +  T
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 58/136 (42%)

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +DDA   F  M+   P    V  + +I  + +      A  +Y +M    I  NI S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI   C    +  +L  F         PDVVT+  L+ G C   R +EA+ L+  M+  G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 198 IMPDGLLLSTLADYNL 213
            +    L   + +  L
Sbjct: 207 FLEAVALFDQMVEIGL 222


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A KL   +  R ++PDI TYN++I G+C  +RLD+A Q+FE +      P+
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI  FCK  R++D T +F +M  +G   + VTY+ LI G F   +  +A  V++
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLC  G +E+AL  F     + +  D+  Y  +I G CKAG
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ +  +T+
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTM 470



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  ++    +E D++ +NTII   C    +D+A+ LF+++    ++PN
Sbjct: 159 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 218

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+EK    N+VT++ LID + K      A  +++
Sbjct: 219 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 278

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +I P+I +Y+ LI+G C    +++A   F   +     PD+ TY  LI+G+CK+ 
Sbjct: 279 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 338

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +  +L+  M   G++ D +  +TL
Sbjct: 339 RVEDGTELFREMSHRGLVGDTVTYTTL 365



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   CS  R  +A QL   +   ++ PN
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG+  +A  +   M+++    ++ TY+ LI+G+     +  A  ++E
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++ +Y+ LI G CK   +E+    F       L+ D VTY  LI+G    G
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ PD +  S L D
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 402



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 3/199 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G  PD IT+ T+I G    N+  EAV L +++     +PN 
Sbjct: 90  CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 149

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G +D A  + +KM     +A+VV ++ +ID   K +++  A ++++E
Sbjct: 150 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 209

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + P++VT+  LI  + K G+
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 269

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA +L+D M++  I PD
Sbjct: 270 FVEAEKLHDDMIKRSIDPD 288



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 117/208 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  L  +L L G++   G EP I+T ++++ GYC   R+ +AV L +++  +  +P++
Sbjct: 55  MKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 114

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           ITFT LI       +  +A  +  +M+++G + N+VTY  +++G  K  ++  AF++  +
Sbjct: 115 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 174

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I  ++V ++ +ID LCK   +++AL  F       + P+VVTY+ LI   C  GR
Sbjct: 175 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 234

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A QL   M+   I P+ +  + L D
Sbjct: 235 WSDASQLLSDMIEKKINPNLVTFNALID 262



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 99/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  RG +P+++TY  ++ G C    +D A  L  K+   +++ + + F  +ID
Sbjct: 133 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 192

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK   +DDA  +F +M  KG + NVVTYS LI           A  +  +M E  I+P
Sbjct: 193 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 252

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+++ LID   K G   EA       +   + PD+ TY  LI G+C   R  +A Q++
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312

Query: 191 DSMLRNGIMPD 201
           + M+     PD
Sbjct: 313 EFMVSKDCFPD 323



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 117/209 (55%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   PD+ TYNT+I G+C   R+++  +LF +++   L  +++T+T
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 363

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI     +G  D+A  +F +M+  G   +++TYS L+DG   +  ++ A +V++ M ++
Sbjct: 364 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            I  +I  Y+ +I+G+CK G +++  +   C+L    + P+VVTY  +I G C      E
Sbjct: 424 EIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L   M  +G +PD    +TL   +L+
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRAHLR 511



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +LF +++ RGL  D +TY T+I G       D A ++F+++    + P+ +
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  C  G+++ A  +F  M +   K ++  Y+ +I+G  K+  +   +D++  +
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+V+Y+ +I GLC + L++EA        ++  LPD  TY  LIR + + G  
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
             + +L   M     + D    GL+ + L D  L  S
Sbjct: 516 AASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 552


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 119/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++ +RGL+PD  +Y+T++ G C   ++D A+++FE  +     P+ + ++ 
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK GR+D+A  +F KM E   + +VVT++ L+DG  K   ++ A  V E M + N
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+++YS LIDGLCK G + +A   F   +   + P+VVTY  LI G+C       A+
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M   G +PD +  +TL D
Sbjct: 308 LLMEEMTATGCLPDIITYNTLID 330



 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++F ++  RG+EP+++TYN++I G+C  N +D A+ L E++T     P+
Sbjct: 262 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 321

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID  CK GR  +A  +F  M  K    +V+TYSCLI G+ K + +  A  +++
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 381

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + P++V++S L++G C  GL+++A       + +   PDV TY  L+ G+CK G
Sbjct: 382 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA ++   M + G  P+ +  + L D
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALID 470



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+AL L  ++T  G  PDIITYNT+I G C   R  EA +LF  +      P+ IT++ 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FCK  R+D A  +F  ML++    +VVT+S L++GY  +  +  A  + EEM  ++
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++ +Y+ L+DG CK G M EA             P+VVTY  LI  +C+AG+PT A 
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + M+ NG+ P+ +   +L
Sbjct: 483 KLLEEMVGNGVQPNVITYRSL 503



 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D ALK+F   ++    PD++ Y+T+I G C   RLDEA +LFEK+     +P+
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT L+D  CK  R+ +A  +   M ++    NV+TYS LIDG  K+  ++ A +V++
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I PN+V+Y+ LI G C    ++ AL           LPD++TY  LI G CK G
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 336

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA +L+  M      PD +  S L
Sbjct: 337 RAPEANRLFGDMKAKFCNPDVITYSCL 363



 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A KLF ++ +   EPD++T+  ++ G C  +RL EA Q+ E +      PN
Sbjct: 192 LCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ LID  CK G++ DA  +F +M+ +G + NVVTY+ LI G+  +  + SA  + E
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA---------------------LYAFHCALD 160
           EM      P+I++Y+ LIDGLCK G   EA                     L    C L+
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371

Query: 161 --------------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                           +LPDVVT++ L+ GYC AG   +A +L + M+ +   PD    +
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431

Query: 207 TLAD 210
           +L D
Sbjct: 432 SLVD 435



 Score =  139 bits (350), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A   F ++  +G  P+  TYN +I G+C ++++  A  L +++    L PN
Sbjct: 17  LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 76

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +I  FC++ ++D A  +F +M+E G   N+VTY+ L+ G  ++  M  A+++ +
Sbjct: 77  VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 136

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + P+  SY  L+ GLCK G ++ AL  F    +    PDVV Y+ LI G CK G
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +L++ M  N   PD +  + L D
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMD 225



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 114/195 (58%), Gaps = 1/195 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF  +  + + PD++T++T++ GYC+   +D+A +L E++      P+  T+T
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D FCK GRM +A  +  +M ++G + NVVTY+ LID + ++     A+ + EEM  N
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            + PN+++Y  LI G C  G +EEA         D +   D+  Y +++ G C+ GR + 
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551

Query: 186 AMQLYDSMLRNGIMP 200
           A++L +++ ++G  P
Sbjct: 552 ALELLEAIKQSGTPP 566



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D A KLF Q+ + G  P+++TYNT++ G C    +DEA +L +++    L+P+  
Sbjct: 89  RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 148

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+   CK G++D A  +F          +VV YS LI G  K+  +  A  ++E+M
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN+  P++V+++ L+DGLCK   ++EA        D +  P+V+TY+ LI G CK G+ 
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 268

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +++  M+  GI P+ +  ++L
Sbjct: 269 RDAQEVFKRMIVRGIEPNVVTYNSL 293



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 111/197 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ + GL P+++TY+T+I G+C   ++D A +LF ++      PN +T+  L+   C
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G MD+A  +  +M E+G + +  +Y  L+ G  K+  +  A  V+E+    +  P++V
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +YS LI GLCK G ++EA   F    +N   PDVVT+  L+ G CK  R  EA Q+ ++M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 194 LRNGIMPDGLLLSTLAD 210
                 P+ +  S+L D
Sbjct: 244 EDRNCTPNVITYSSLID 260



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 105/195 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A +LFG +  +   PD+ITY+ +I G+C L R+D A  LF+ +    + P+
Sbjct: 332 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 391

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ L++ +C  G +DDA  +  +M+      +V TY+ L+DG+ K   M  A  V +
Sbjct: 392 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 451

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    PN+V+Y+ LID  C+ G    A       + N + P+V+TY  LI G+C  G
Sbjct: 452 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTG 511

Query: 182 RPTEAMQLYDSMLRN 196
              EA ++ + + R+
Sbjct: 512 DLEEARKMLERLERD 526



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 92/153 (60%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           ++ + N IT+TI+ID  CK  R+ +AT  F+KM +KG   N  TY+ LI+G+ K   +  
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A+ + +EM E+ ++PN+V+YS +I G C++  ++ A   F   ++N  +P++VTY  L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G C+ G   EA +L D M   G+ PD     TL
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 153



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 2/143 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILI 69
           A KL  ++   G++P++ITY ++I G+C    L+EA ++ E+L   +  K +   + +++
Sbjct: 481 AYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMM 540

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  C+ GRM  A  +   + + G       Y  LI G  + + +  A +V EEM  +  S
Sbjct: 541 DGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS 600

Query: 130 -PNIVSYSILIDGLCKRGLMEEA 151
            PN  +Y  +I  L + G  EEA
Sbjct: 601 RPNAEAYEAVIQELAREGRHEEA 623



 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKP 60
           L +   + AAL+L   +   G  P    Y  +I G C    L +A+++ E++T   + +P
Sbjct: 543 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 602

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKML 89
           N+  +  +I    +EGR ++A  +  ++L
Sbjct: 603 NAEAYEAVIQELAREGRHEEANALADELL 631


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 126/207 (60%), Gaps = 4/207 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ LF ++  +G++  ++TYN+++ G C   + ++   L + +   ++ PN ITF +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D F KEG++ +A  ++ +M+ +G   N++TY+ L+DGY     +  A ++ + M  N 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+IV+++ LI G C    +++ +  F       L+ + VTY+IL++G+C++G+   A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 188 QLYDSMLRNGIMPD----GLLLSTLAD 210
           +L+  M+ +G++PD    G+LL  L D
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCD 450



 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 121/201 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ P+IITYNT++ GYC  NRL EA  + + +   +  P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT LI  +C   R+DD   +F  + ++G  AN VTYS L+ G+ +S  +K A +++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  + + P++++Y IL+DGLC  G +E+AL  F     + +   +V Y  +I G CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A  L+ S+   G+ P+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPN 507



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 116/205 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ +R ++ D+ TY+TII   C    +D A+ LF+++    +K + +T+  L+ 
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+ +D  ++   M+ +    NV+T++ L+D + K   ++ A ++Y+EM    ISP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ L+DG C +  + EA       + N   PD+VT+  LI+GYC   R  + M+++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
            ++ + G++ + +  S L     QS
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQS 416



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A+ L  ++ + G +PD++TYN+I+ G C       A+ L  K+    +K +
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ +ID+ C++G +D A  +F +M  KG K++VVTY+ L+ G  K+        + +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I PN++++++L+D   K G ++EA   +   +   + P+++TY  L+ GYC   
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R +EA  + D M+RN   PD +  ++L
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSL 374



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 1/217 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C    A  + G++   G EPD  T+NT+I G     ++ EAV L +++     +P+ +T+
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++  C+ G    A  +  KM E+  KA+V TYS +ID   +   + +A  +++EM  
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I  ++V+Y+ L+ GLCK G   +        +   ++P+V+T+ +L+  + K G+  E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
           A +LY  M+  GI P+ +  +TL D Y +Q+  S+ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           QL   G+  +I T N +I  +C   +   A  +  K+  +  +P++ TF  LI     EG
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++ +A ++  +M+E G + +VVTY+ +++G  +S +   A D+  +M E N+  ++ +YS
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            +ID LC+ G ++ A+  F       +   VVTY  L+RG CKAG+  +   L   M+  
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
            I+P+ +  + L D  ++    QE
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQE 316



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 118/226 (52%), Gaps = 11/226 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  +K+F  ++ RGL  + +TY+ ++ G+C   ++  A +LF+++    + P+ +T+ 
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  C  G+++ A  +F  + +      +V Y+ +I+G  K   ++ A++++  +   
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++Y+++I GLCK+G + EA        ++   P+  TY  LIR + + G  T +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 187 MQLYDSMLRNGIMPDG--------LLLSTLADYNLQ---SSGSQEH 221
            +L + M   G   D         +LLS +    L+   S GS+  
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSR 608



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 89/190 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF ++      P ++ ++          + +  +   ++L    +  N  T  I+
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  +   A  +  K+++ G + +  T++ LI G F    +  A  + + M EN  
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ +++G+C+ G    AL       + ++  DV TY+ +I   C+ G    A+ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 189 LYDSMLRNGI 198
           L+  M   GI
Sbjct: 250 LFKEMETKGI 259



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSC 102
           D+A+ LF+++   +  P+ + F+    A  +  + +   + F K LE  G   N+ T + 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN-LVLDFCKQLELNGIAHNIYTLNI 128

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           +I+ + +      A+ V  ++ +    P+  +++ LI GL   G + EA+      ++N 
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             PDVVTY  ++ G C++G  + A+ L   M    +  D    ST+ D
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 1/212 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL++   + D G +PD  +Y  +ICG+C +++++ A  LF ++    L PN +T+T LI
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +CK+ ++D AT +   M   G + NV TY+ LI G  K  N   A ++ + M E  I 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ +IDGLCK G    AL  F+  ++   LP+++TY+ LIR   + G+  EA  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  + R+G++PD +    + +  +  SG  EH
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIM-SGKVEH 688



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           M++  C    LD+AL++F Q+   G EP+ +TY+T+I G C   R++EA  L  ++    
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P + T T  I A C  G  +DA  +F  M  KG + NV TY+ LI G   S  +K A 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++  M  + + PN V+Y+ LI+ L +   ++ A    +    N   P++VTY  +I+GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435

Query: 178 CKAGRPTEAMQLYDSMLRNG 197
           C  G P +AM + ++ML+ G
Sbjct: 436 CILGDPKKAMLVMNNMLQRG 455



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 2/194 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++A  LF ++ D GL P+ +TY  +I GYC   +LD A  L E +     +PN  T+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K+     A  +   M+E+G   NVVTY+ +IDG  K+ +   A +++ +M E  
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEA 186
             PN+++YS LI  L + G +EEA   F   L+ H L+PD +TY  +I  Y  +G+   A
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 187 MQLYDSMLRNGIMP 200
                 M++ G  P
Sbjct: 690 FNFLGRMIKAGCQP 703



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ LF +++  G+ P+ +TYN +I       R+  A  +   +      PN +T+  
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C  G    A ++ + ML++G  AN+VTY+ +I GY  S N  SA  + + M +  
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  SY+ LI G CK   ME A   F+  +D+ L P+ VTY  LI GYCK  +   A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 188 QLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
            L + M R+G  P+     +L+  L   N   SG++E C
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQN-NFSGAEELC 588



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------- 53
           +L++   +  A  +   +   G  P+I+TYN +I GYC L    +A+ +   +       
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 54  -----------------TCVQL-----------KPNSITFTILIDAFCKEGRMDDATMMF 85
                            T   L           KP+  ++T LI  FCK  +M+ A  +F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           ++M++ G   N VTY+ LIDGY K + + +A  + E M  +   PN+ +Y++LI GL K+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                A       ++  + P+VVTY  +I G CK G  + A+++++ M+  G +P+ L  
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 206 STL 208
           S+L
Sbjct: 639 SSL 641



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 106/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +  + ++   G++P+++ YN +I   C    + +A  + +K+   ++ P++ T+T +I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C++  +D A  +F++M ++G + N VTYS LI+G   S  +  AFD+  EM  + I 
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   + +  I  LC  G  E+A   F    +    P+V TY  LI G C +G    A+ L
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M R+G+ P+ +  + L +
Sbjct: 378 FHRMSRDGVFPNTVTYNALIN 398



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 87/173 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   G  P++ TYN +I G    N    A +L + +    + PN +
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G    A  MF+KM+E+G   N++TYS LI    +   ++ A +++ E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + P+ ++Y  +I+     G +E A       +     P + TY +LI+G
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +   A +L   + + G+ P+++TY  +I G C       A+++F K+      PN
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI A  +EG++++A  +F+++   G   + +TY  +I+ Y  S  ++ AF+   
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV------------- 168
            M +    P + +Y +LI GL    L+ +   A         LPDVV             
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA--------ALPDVVPNCSFGYQTTDQD 746

Query: 169 -------------------TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                                  L+     AGR  EA +L  SM+  G+ PD
Sbjct: 747 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 1/130 (0%)

Query: 82  TMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           TM F  ML + G +  +  YS L+    +     +  D Y  M    + PN++ Y+ +I+
Sbjct: 164 TMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVIN 223

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK G + +A        ++ + PD  TY  +I G+C+      A+Q+++ M + G  P
Sbjct: 224 ALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEP 283

Query: 201 DGLLLSTLAD 210
           + +  STL +
Sbjct: 284 NTVTYSTLIN 293



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L G +  +GL PD   YN+++C    +  +D A+ +F+ ++    + +   +  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           A C+  R  +A + F  ML +    + V  + LIDG  +        D Y+++C
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR--------DGYKDLC 888



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  ++D A+ +F  ++ +G E  +  Y  +IC  C L+R  EA   FE +      P+
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE 90
            +   +LID   ++G   D  M F  ++E
Sbjct: 869 DVVQAVLIDGLLRDG-YKDLCMEFLHIME 896



 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 2/160 (1%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           D GL   +   N ++    +  R  EA +L   +    L P+   +  L+ +  +   +D
Sbjct: 759 DPGLSVQV--QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +F  M  +G + ++  Y  LI    +    K A   +E M     +P+ V  ++LI
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           DGL + G  +  +   H       +P    Y IL R   K
Sbjct: 877 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 24/226 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGY--------------------CSL--NRLDE 45
           ++ A    G++   G +P + TY  +I G                     CS      D+
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 745

Query: 46  AVQLFEKLTCVQLKPN-SITF-TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
                      +L P  S+     L+      GR  +A  +   M+ +G   +   Y+ L
Sbjct: 746 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           +    + +N+  A  V++ M       ++  Y  LI  LC+    +EA   F   L    
Sbjct: 806 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 865

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            PD V  A+LI G  + G     M+    M     MP   + + LA
Sbjct: 866 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 1/212 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL++   + D G +PD  +Y  +ICG+C +++++ A  LF ++    L PN +T+T LI
Sbjct: 648 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +CK+ ++D AT +   M   G + NV TY+ LI G  K  N   A ++ + M E  I 
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ +IDGLCK G    AL  F+  ++   LP+++TY+ LIR   + G+  EA  L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  + R+G++PD +    + +  +  SG  EH
Sbjct: 828 FAELERHGLIPDEITYVKMIEAYIM-SGKVEH 858



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           M++  C    LD+AL++F Q+   G EP+ +TY+T+I G C   R++EA  L  ++    
Sbjct: 426 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 485

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P + T T  I A C  G  +DA  +F  M  KG + NV TY+ LI G   S  +K A 
Sbjct: 486 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 545

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++  M  + + PN V+Y+ LI+ L +   ++ A    +    N L  ++VTY  +I+GY
Sbjct: 546 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY 605

Query: 178 CKAGRPTEAMQLYDSMLRNG 197
           C  G P +AM + ++ML+ G
Sbjct: 606 CILGDPKKAMLVMNNMLQRG 625



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 2/194 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++A  LF ++ D GL P+ +TY  +I GYC   +LD A  L E +     +PN  T+ +
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K+     A  +   M+E+G   NVVTY+ +IDG  K+ +   A +++ +M E  
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEA 186
             PN+++YS LI  L + G +EEA   F   L+ H L+PD +TY  +I  Y  +G+   A
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLIPDEITYVKMIEAYIMSGKVEHA 859

Query: 187 MQLYDSMLRNGIMP 200
                 M++ G  P
Sbjct: 860 FNFLGRMIKAGCQP 873



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 41/256 (16%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C+ DA  +LF  + ++G EP++ TY  +I G C    L  A+ LF +++   + PN++T+
Sbjct: 505 CYEDA-WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563

Query: 66  TILID-----------------------------------AFCKEGRMDDATMMFSKMLE 90
             LI+                                    +C  G    A ++ + ML+
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           +G  AN+VTY+ +I GY  S N  SA  + + M +    P+  SY+ LI G CK   ME 
Sbjct: 624 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 683

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD----GLLLS 206
           A   F+  +D+ L P+ VTY  LI GYCK  +   A  L + M R+G  P+     +L+ 
Sbjct: 684 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 743

Query: 207 TLADYNLQSSGSQEHC 222
            L   N   SG++E C
Sbjct: 744 GLTKQN-NFSGAEELC 758



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAV----QLFEKLTCV 56
           +L++   +  A  +   +   GL  +I+TYN +I GYC L    +A+     + ++    
Sbjct: 569 ILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 628

Query: 57  QL-------------------------------KPNSITFTILIDAFCKEGRMDDATMMF 85
            L                               KP+  ++T LI  FCK  +M+ A  +F
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           ++M++ G   N VTY+ LIDGY K + + +A  + E M  +   PN+ +Y++LI GL K+
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                A       ++  + P+VVTY  +I G CK G  + A+++++ M+  G +P+ L  
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 206 STL 208
           S+L
Sbjct: 809 SSL 811



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 105/199 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +  + ++   G++P+++ YN +I   C    + +A  + +K+   ++ P++ T+T +I
Sbjct: 368 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 427

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C++  +D A  +F++M ++G + N VTYS LI+G   S  +  AFD+  EM  + I 
Sbjct: 428 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 487

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   + +  I  LC  G  E+A   F    +    P+V TY  LI G C +G    A+ L
Sbjct: 488 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 547

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           +  M R+G+ P+ +  + L
Sbjct: 548 FHRMSRDGVFPNTVTYNAL 566



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 87/173 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   G  P++ TYN +I G    N    A +L + +    + PN +
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G    A  MF+KM+E+G   N++TYS LI    +   ++ A +++ E+
Sbjct: 772 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 831

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + P+ ++Y  +I+     G +E A       +     P + TY +LI+G
Sbjct: 832 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +   A +L   + + G+ P+++TY  +I G C       A+++F K+      PN
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI A  +EG++++A  +F+++   G   + +TY  +I+ Y  S  ++ AF+   
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV------------- 168
            M +    P + +Y +LI GL    L+ +   A         LPDVV             
Sbjct: 865 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA--------ALPDVVPNCSFGYQTTDQD 916

Query: 169 -------------------TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                                  L+     AGR  EA +L  SM+  G+ PD
Sbjct: 917 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)

Query: 82  TMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           TM F  ML + G +  +  YS L+    +     +  D Y  M    + PN++ Y+ +I+
Sbjct: 334 TMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVIN 393

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK G + +A        ++ + PD  TY  +I G+C+      A+Q+++ M + G  P
Sbjct: 394 ALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEP 453

Query: 201 DGLLLSTL 208
           + +  STL
Sbjct: 454 NTVTYSTL 461



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A +L G +  +GL PD   YN+++C    +  +D A+ +F+ ++    + +   +  LI 
Sbjct: 953  ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 1012

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            A C+  R  +A + F  ML +    + V  + LIDG  +        D Y+++C
Sbjct: 1013 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR--------DGYKDLC 1058



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L++  ++D A+ +F  ++ +G E  +  Y  +IC  C L+R  EA   FE +      P+
Sbjct: 979  LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 1038

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLE 90
             +   +LID   ++G   D  M F  ++E
Sbjct: 1039 DVVQAVLIDGLLRDG-YKDLCMEFLHIME 1066



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 2/160 (1%)

Query: 20   DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
            D GL   +   N ++    +  R  EA +L   +    L P+   +  L+ +  +   +D
Sbjct: 929  DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 986

Query: 80   DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
             A  +F  M  +G + ++  Y  LI    +    K A   +E M     +P+ V  ++LI
Sbjct: 987  LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 1046

Query: 140  DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            DGL + G  +  +   H       +P    Y IL R   K
Sbjct: 1047 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086



 Score = 43.9 bits (102), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 24/226 (10%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGY--------------------CSL--NRLDE 45
            ++ A    G++   G +P + TY  +I G                     CS      D+
Sbjct: 856  VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 915

Query: 46   AVQLFEKLTCVQLKPN-SITF-TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
                       +L P  S+     L+      GR  +A  +   M+ +G   +   Y+ L
Sbjct: 916  DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 975

Query: 104  IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
            +    + +N+  A  V++ M       ++  Y  LI  LC+    +EA   F   L    
Sbjct: 976  LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 1035

Query: 164  LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
             PD V  A+LI G  + G     M+    M     MP   + + LA
Sbjct: 1036 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 1081


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 43/248 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTII--------------------------- 34
           L K  +   A+ +F ++   G +PD++TYNTII                           
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262

Query: 35  --------CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                    G+C L +L+EA +LF+++    + P+++T TIL+D  CKEG + +A ++F 
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M EKG + N+ TY+ L+DGY   + M  A  V+E M     +P + SY+ILI+G CK  
Sbjct: 323 TMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382

Query: 147 LMEEA--LYA--FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            M+EA  L A  +H AL+    PD VTY+ L++G C+ GRP EA+ ++  M   G++P+ 
Sbjct: 383 RMDEAKSLLAEMYHKALN----PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438

Query: 203 LLLSTLAD 210
           +  S L D
Sbjct: 439 VTYSILLD 446



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 131/235 (55%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++   ++ DRG+ P++ TYN ++ G+C L +L+EA +LF+++    + P+
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T TIL+D  CKEG + +A ++F  M EKG + N+ TY+ L+DGY   + M  A  V+E
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA--LYA--FHCALDNH--------------- 162
            M     +P + SY+ILI+G CK   M+EA  L A  +H AL+                 
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417

Query: 163 ----------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                           LLP++VTY+IL+ G+CK G   EA++L  SM    + P+
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472



 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 117/199 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A++LF ++  RG EP++I+YNTII G C       AV +F+K+     KP+
Sbjct: 168 LCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPD 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID+ CK+  ++DA    S+ML++G   NV TY+C++ G+     +  A  +++
Sbjct: 228 VVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFK 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ V+ +IL+DGLCK G++ EA   F    +  + P++ TY  L+ GYC   
Sbjct: 288 EMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQR 347

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              EA ++++ M+R G  P
Sbjct: 348 LMNEAKKVFEIMIRQGCAP 366



 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +T++G+EP+I TYN ++ GYC    ++EA ++FE +      P 
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ FCK  RMD+A  + ++M  K    + VTYS L+ G  +    K A ++++
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC   + PN+V+YSIL+DG CK G ++EAL       +  L P++V + ILI G   AG
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAG 487

Query: 182 RPTEAMQLYDSMLRNGIMP---------DGLLLSTLAD 210
           +   A +L+  +  +GI P          GLL   L+D
Sbjct: 488 KLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 120/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+      + L  Q+   G+  ++ + N +I   C LN +D AV +  K+  + + P + 
Sbjct: 100 KKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTAS 159

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+  C EG++ +A  +F++M+ +G + NV++Y+ +I+G  K+ N   A DV+++M
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N   P++V+Y+ +ID LCK  L+ +A+      LD  + P+V TY  ++ G+C  G+ 
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L+  M+   +MPD + L+ L D
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVD 306



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 112/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D A+ + G++   G+ P   T+N +I G C+  ++ EAV+LF ++     +PN I++ 
Sbjct: 138 HVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYN 197

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +F KM + G K +VVTY+ +ID   K + +  A +   EM + 
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR 257

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN+ +Y+ ++ G C  G + EA   F   +   ++PD VT  IL+ G CK G  +EA
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEA 317

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++++M   G+ P+    + L D
Sbjct: 318 RLVFETMTEKGVEPNISTYNALMD 341



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 113/191 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  ++  + L PD +TY+T++ G C   R  EA+ +F+++    L PN +
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D FCK G +D+A  +   M EK  + N+V ++ LI+G F +  ++ A +++ ++
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKL 499

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I P I +Y+++I GL K GL +EA   F    D+  LP+  +Y ++I+G+ +    
Sbjct: 500 FADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 559

Query: 184 TEAMQLYDSML 194
           + A++L D M+
Sbjct: 560 STAIRLIDEMV 570



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 114/211 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+F  +  +G  P + +YN +I G+C   R+DEA  L  ++    L P+++T++ 
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C+ GR  +A  +F +M   G   N+VTYS L+DG+ K  ++  A  + + M E  
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PNIV ++ILI+G+   G +E A   F     + + P + TY ++I+G  K G   EA 
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            L+  M  +G +P+    + +    LQ+  S
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 559



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  F ++      P +  +   +  +    +    V L  ++    +  N  +  +
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  C+   +D A  +  KM + G      T++ LI+G      +K A +++ EM    
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN++SY+ +I+GLCK G    A+  F     N   PDVVTY  +I   CK     +AM
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 188 QLYDSMLRNGIMPD 201
           +    ML  GI P+
Sbjct: 249 EFLSEMLDRGIPPN 262



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 78/137 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  HLD ALKL   + ++ LEP+I+ +  +I G     +L+ A +LF KL    ++P   
Sbjct: 450 KHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIR 509

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++I    KEG  D+A  +F KM + G   N  +Y+ +I G+ ++Q+  +A  + +EM
Sbjct: 510 TYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569

Query: 124 CENNISPNIVSYSILID 140
                S N+ ++ +L+D
Sbjct: 570 VGKRFSANLSTFQMLLD 586



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 87/168 (51%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           +D+A+  F ++  +  +P+   F   + +F K+ +      + ++M   G   NV + + 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LI+   +  ++  A  +  +M +  I P   +++ LI+GLC  G ++EA+  F+  +   
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             P+V++Y  +I G CK G  + A+ ++  M +NG  PD +  +T+ D
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE   D A  LF ++ D G  P+  +YN +I G+        A++L +++   +   N
Sbjct: 518 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSAN 577

Query: 62  SITFTILID 70
             TF +L+D
Sbjct: 578 LSTFQMLLD 586


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 126/216 (58%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD AL+LF  + ++ L PDI+TYNT+I G C    LD+A  L++ +   ++ PN +T
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 473

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ILID+ C++G+++DA     +M+ KG   N++TY+ +I GY +S N+       ++M 
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N +SP++++Y+ LI G  K   M +A    +      + PDVVTY +LI G+   G   
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           EA  +++ M   GI PD     ++ + ++ +  S+E
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 629



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 119/198 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  ++   G  PD++TYNT++ G C   RL +A  L  ++    + P+  TFT LI 
Sbjct: 350 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 409

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C EG++D A  +F  ML +  + ++VTY+ LIDG  +  ++  A D++++M    I P
Sbjct: 410 GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 469

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+YSILID  C++G +E+A       ++  +LP+++TY  +I+GYC++G  ++  +  
Sbjct: 470 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 529

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+ N + PD +  +TL
Sbjct: 530 QKMMVNKVSPDLITYNTL 547



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  ++ +RG+ PD+ T+ T+I GYC   +LD+A+QLF+ +   +L+P+
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  C++G +D A  ++  M  +    N VTYS LID + +   ++ AF   +
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I PNI++Y+ +I G C+ G + +        + N + PD++TY  LI GY K  
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  +A +L + M +  + PD      +  YN+  +G   H
Sbjct: 556 KMHDAFKLLNMMEKEKVQPD------VVTYNMLINGFSVH 589



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 116/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ ALK++ ++  RG++PD+++++ +I  +    ++D A+    ++ C  L P+ + +T+
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC+ G M DA  +  +M+  G   +VVTY+ L++G  K + +  A  +  EM E  
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +++ LI G C  G +++AL  F   L+  L PD+VTY  LI G C+ G   +A 
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+D M    I P+ +  S L D
Sbjct: 457 DLWDDMHSREIFPNHVTYSILID 479



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 113/200 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +AA+ L   +  +GL+P I+TYN+++ G C     D+A ++F+++    + P+  +FTIL
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  FC+ G +++A  ++ +M  +G K ++V++SCLI  + +   M  A     EM    +
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 327

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ V Y+++I G C+ GLM +AL      +    LPDVVTY  L+ G CK  R  +A  
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 387

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L + M   G+ PD    +TL
Sbjct: 388 LLNEMRERGVPPDLCTFTTL 407



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 112/201 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +   +D A+    ++   GL PD + Y  +I G+C    + +A+++ +++      P
Sbjct: 305 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 364

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L++  CKE R+ DA  + ++M E+G   ++ T++ LI GY     +  A  ++
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    + P+IV+Y+ LIDG+C++G +++A   +       + P+ VTY+ILI  +C+ 
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A    D M+  GI+P+
Sbjct: 485 GQVEDAFGFLDEMINKGILPN 505



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D    +  ++  R + PD++T+N ++         + A+ L + +    LKP  +
Sbjct: 168 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIV 227

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  ++   C+ G  D A  +F +M + G   +V +++ LI G+ +   ++ A  +Y+EM
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++VS+S LI    +RG M+ A+          L+PD V Y ++I G+C+AG  
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 347

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A+++ D M+  G +PD +  +TL
Sbjct: 348 SDALRVRDEMVGCGCLPDVVTYNTL 372



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 6/188 (3%)

Query: 24  EPDIITYNTIICGYCS---LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           E +  T N ++  YC     +++D  +   EK  CV   P+ +T  +++DA  + G  + 
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEK-RCVF--PDVVTHNVMVDARFRAGDAEA 209

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +   M+ KG K  +VTY+ ++ G  +S     A++V++EM +  ++P++ S++ILI 
Sbjct: 210 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G +EEAL  +       + PD+V+++ LI  + + G+   AM     M   G++P
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 201 DGLLLSTL 208
           DG++ + +
Sbjct: 330 DGVIYTMV 337


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A KL   +  R ++PDI TYN++I G+C  +RLD+A Q+FE +      P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI  FCK  R++D T +F +M  +G   + VTY+ LI G F   +  +A  V++
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + P+I++YSIL+DGLC  G +E+AL  F     + +  D+  Y  +I G CKAG
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +   L+ S+   G+ P+ +  +T+
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTM 471



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  ++    +E D++ +NTII   C    +D+A+ LF+++    ++PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI   C  GR  DA+ + S M+EK    N+VT++ LID + K      A  +++
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +I P+I +Y+ LI+G C    +++A   F   +     PD+ TY  LI+G+CK+ 
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +  +L+  M   G++ D +  +TL
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTL 366



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF ++  +G+ P+++TY+++I   CS  R  +A QL   +   ++ PN
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG+  +A  +   M+++    ++ TY+ LI+G+     +  A  ++E
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P++ +Y+ LI G CK   +E+    F       L+ D VTY  LI+G    G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A +++  M+ +G+ PD +  S L D
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 403



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 115/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  AL L G++   G EP I+T ++++ GYC   R+ +AV L +++  +  +P++I
Sbjct: 57  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI       +  +A  +  +M+++G + N+VTY  +++G  K  ++  AF++  +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I  ++V ++ +ID LCK   +++AL  F       + P+VVTY+ LI   C  GR 
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A QL   M+   I P+ +  + L D
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALID 263



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 3/199 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G  PD IT+ T+I G    N+  EAV L +++     +PN 
Sbjct: 91  CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ ++++  CK G +D A  + +KM     +A+VV ++ +ID   K +++  A ++++E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+YS LI  LC  G   +A       ++  + P++VT+  LI  + K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA +L+D M++  I PD
Sbjct: 271 FVEAEKLHDDMIKRSIDPD 289



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 99/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++  RG +P+++TY  ++ G C    +D A  L  K+   +++ + + F  +ID
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK   +DDA  +F +M  KG + NVVTYS LI           A  +  +M E  I+P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+++ LID   K G   EA       +   + PD+ TY  LI G+C   R  +A Q++
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313

Query: 191 DSMLRNGIMPD 201
           + M+     PD
Sbjct: 314 EFMVSKDCFPD 324



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 117/209 (55%), Gaps = 2/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   PD+ TYNT+I G+C   R+++  +LF +++   L  +++T+T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI     +G  D+A  +F +M+  G   +++TYS L+DG   +  ++ A +V++ M ++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            I  +I  Y+ +I+G+CK G +++  +   C+L    + P+VVTY  +I G C      E
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L   M  +G +PD    +TL   +L+
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLR 512



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +LF +++ RGL  D +TY T+I G       D A ++F+++    + P+ +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D  C  G+++ A  +F  M +   K ++  Y+ +I+G  K+  +   +D++  +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+V+Y+ +I GLC + L++EA        ++  LPD  TY  LIR + + G  
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
             + +L   M     + D    GL+ + L D  L  S
Sbjct: 517 AASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 553



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L  ++   G+  ++ TYN +I  +C  +++  A+ L  K+  +  +P+ +T + 
Sbjct: 26  FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 85

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ +C   R+ DA  +  +M+E G + + +T++ LI G F       A  + + M +  
Sbjct: 86  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y ++++GLCKRG ++ A    +      +  DVV +  +I   CK     +A+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205

Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
            L+  M   GI P+ +    L+S L  Y   S  SQ
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 93/186 (50%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I  +N ++     + + D  + L EK+  + +  N  T+ ILI+ FC+  ++  A  +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             KM++ G + ++VT S L++GY   + +  A  + ++M E    P+ ++++ LI GL  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
                EA+      +     P++VTY +++ G CK G    A  L + M    I  D ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 205 LSTLAD 210
            +T+ D
Sbjct: 188 FNTIID 193



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M++  P  ++  ++ L+    K +       + E+M    IS N+ +Y+ILI+  C+R  
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +  AL      +     P +VT + L+ GYC   R ++A+ L D M+  G  PD +  +T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 208 L 208
           L
Sbjct: 121 L 121


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 121/199 (60%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  +  A +L+ ++  R L+PDI+TY+ +I G C  +RLDEA Q+F  +      P+ 
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ILI+ +CK  +++    +F +M ++G   N VTY+ LI GY ++  +  A ++++ 
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PNI++Y++L+ GLC  G +E+AL        + +  D+VTY I+IRG CKAG 
Sbjct: 387 MVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A  LY S+   G+ PD
Sbjct: 447 VADAWDLYCSLNLKGLTPD 465



 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 117/198 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F ++ + G EP+++ YNTII G C   ++D A+ L  ++    ++P+++T+  LI 
Sbjct: 170 ALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS 229

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR DDAT M S M ++    +V T++ LID   K   +  A ++YEEM   ++ P
Sbjct: 230 GLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS+LI GLC    ++EA   F   +     PDVVTY+ILI GYCK+ +    M+L+
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G++ + +  + L
Sbjct: 350 CEMSQRGVVRNTVTYTVL 367



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 111/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  + L+ Q+   G+  ++ T N ++  +C  ++L  A+    K+  +  +P+ +TF  L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++ FC+  R+ DA  MF +M+E G + NVV Y+ +IDG  KS+ + +A D+   M  + I
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ V+Y+ LI GLC  G  ++A     C     + PDV T+  LI    K GR +EA +
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE 277

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           LY+ M+R  + PD +  S L
Sbjct: 278 LYEEMIRRSLDPDIVTYSLL 297



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  AL   G++   G EPDI+T+ +++ G+C  +R+ +A+ +F+++  +  +PN + + 
Sbjct: 131 QLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYN 190

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID  CK  ++D+A  + ++M   G + + VTY+ LI G   S     A  +   M + 
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKR 250

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++ +++ LID   K G + EA   +   +   L PD+VTY++LI G C   R  EA
Sbjct: 251 EIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            Q++  M+  G  PD +  S L +
Sbjct: 311 EQMFGFMVSKGCFPDVVTYSILIN 334



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 106/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD +L LF  +      P I  ++ ++     + + D  + L+E++  + +  N 
Sbjct: 57  IRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  IL++ FC+  ++  A     KM++ G + ++VT+  L++G+ +   +  A  +++ 
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDR 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    PN+V Y+ +IDGLCK   ++ AL   +    + + PD VTY  LI G C +GR
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A ++   M +  I PD    + L D
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALID 264



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 96/163 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF +++ RG+  + +TY  +I GYC   +L+ A ++F+ +    + PN I
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNII 397

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+   C  G+++ A ++ + M + G  A++VTY+ +I G  K+  +  A+D+Y  +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL 457

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
               ++P+I +Y+ ++ GL K+GL  EA   F    ++ +LP+
Sbjct: 458 NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 119/210 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ P I TYN++I   C+L        L  ++   ++ PN
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+++G + NVVTY+ L+DG+     M  A  V++
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P++VSYS LI+G CK   +E+A+Y F       L+P+ VTY+ L+ G C  G
Sbjct: 329 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +    L DY
Sbjct: 389 RLQDAIALFHEMVTRGQIPDFVSYCILLDY 418



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 124/210 (59%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +G  PD+++Y+T+I GYC + R+++A+ LFE++   +L PN++T++ 
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  GR+ DA  +F +M+ +G   + V+Y  L+D   K++ +  A  + + +  +N
Sbjct: 380 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 439

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I  Y+I+IDG+C+ G +E A   F       L P+V TY I+I G C+ G   EA 
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 499

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L+  M R G  P+G        YNL + G
Sbjct: 500 KLFGEMKRKGYSPNG------CTYNLITRG 523



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  RG+EP+++TYN ++ G+C  + +DEAV++F+ + C    P+
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++++ LI+ +CK  R++ A  +F +M  K    N VTYS L+ G      ++ A  ++ 
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ VSY IL+D LCK   ++EA+        +++ PD+  Y I+I G C+AG
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L+ ++   G+ P+
Sbjct: 459 ELEAARDLFSNLSSKGLHPN 478



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 35/239 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +   L LF ++   G +P+++TY T+I G C +     A++L   +     +P+ + 
Sbjct: 142 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVV 201

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG--PK---------------------------- 94
           +T +ID+ CK+ ++  A  +FS+M+ +G  P                             
Sbjct: 202 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261

Query: 95  -----ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                 NVV +S ++D   K   +  A DV + M +  + PN+V+Y+ L+DG C R  M+
Sbjct: 262 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 321

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EA+  F   +     PDVV+Y+ LI GYCK  R  +AM L++ M R  ++P+ +  STL
Sbjct: 322 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 104/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  H    L L  Q+   G+ P+I T N +I  +C L RL  A  +  K+  +  +PN
Sbjct: 69  ITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPN 128

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  LI   C EG++ +   +F KM+ +G + NVVTY  LI+G  K  +  +A  +  
Sbjct: 129 IATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLR 188

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N  P++V Y+ +ID LCK   + +A   F   +   + P + TY  LI   C   
Sbjct: 189 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 248

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  L + M+ + IMP+ ++ ST+ D
Sbjct: 249 EWKHVTALLNEMVNSKIMPNVVIFSTVVD 277



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 90/193 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P I  +  ++     +      + L  ++    + PN  T  I
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + N+ T++ LI G      +     ++++M    
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + T+A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 188 QLYDSMLRNGIMP 200
            L+  M+  GI P
Sbjct: 220 NLFSEMIHQGISP 232



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           ++NT      + N LD+A+  F ++  +   P+   FT L+ +  K         +  +M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G   N+ T + LI+ +   Q +  AF V  ++ +    PNI +++ LI GLC  G +
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            E L+ F   +     P+VVTY  LI G CK G  + A++L  SM +    PD ++ +++
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 209 AD 210
            D
Sbjct: 206 ID 207



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 3/193 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A+ LF ++  RG  PD ++Y  ++   C   RLDEA+ L + +    + P+ 
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +TI+ID  C+ G ++ A  +FS +  KG   NV TY+ +I+G  +   +  A  ++ E
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     SPN  +Y+++  G  +       +      L      DV T  +L+      G 
Sbjct: 505 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 564

Query: 183 PTEAMQLYDSMLR 195
                Q+    L+
Sbjct: 565 DQSVKQILSEFLQ 577



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L   +    ++PDI  Y  +I G C    L+ A  LF  L+   L PN
Sbjct: 419 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 478

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C++G + +A+ +F +M  KG   N  TY+ +  G+ ++        + +
Sbjct: 479 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQ 538

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L++ L   GL
Sbjct: 539 EMLARGFSADVSTSTVLVEMLSDDGL 564


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 126/216 (58%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD AL+LF  + ++ L PDI+TYNT+I G C    LD+A  L++ +   ++ PN +T
Sbjct: 353 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 412

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ILID+ C++G+++DA     +M+ KG   N++TY+ +I GY +S N+       ++M 
Sbjct: 413 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N +SP++++Y+ LI G  K   M +A    +      + PDVVTY +LI G+   G   
Sbjct: 473 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 532

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           EA  +++ M   GI PD     ++ + ++ +  S+E
Sbjct: 533 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 568



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 119/198 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  ++   G  PD++TYNT++ G C   RL +A  L  ++    + P+  TFT LI 
Sbjct: 289 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 348

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C EG++D A  +F  ML +  + ++VTY+ LIDG  +  ++  A D++++M    I P
Sbjct: 349 GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 408

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+YSILID  C++G +E+A       ++  +LP+++TY  +I+GYC++G  ++  +  
Sbjct: 409 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 468

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+ N + PD +  +TL
Sbjct: 469 QKMMVNKVSPDLITYNTL 486



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  ++ +RG+ PD+ T+ T+I GYC   +LD+A+QLF+ +   +L+P+
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  C++G +D A  ++  M  +    N VTYS LID + +   ++ AF   +
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I PNI++Y+ +I G C+ G + +        + N + PD++TY  LI GY K  
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  +A +L + M +  + PD      +  YN+  +G   H
Sbjct: 495 KMHDAFKLLNMMEKEKVQPD------VVTYNMLINGFSVH 528



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 116/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ ALK++ ++  RG++PD+++++ +I  +    ++D A+    ++ C  L P+ + +T+
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC+ G M DA  +  +M+  G   +VVTY+ L++G  K + +  A  +  EM E  
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +++ LI G C  G +++AL  F   L+  L PD+VTY  LI G C+ G   +A 
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+D M    I P+ +  S L D
Sbjct: 396 DLWDDMHSREIFPNHVTYSILID 418



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 113/200 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +AA+ L   +  +GL+P I+TYN+++ G C     D+A ++F+++    + P+  +FTIL
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  FC+ G +++A  ++ +M  +G K ++V++SCLI  + +   M  A     EM    +
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 266

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ V Y+++I G C+ GLM +AL      +    LPDVVTY  L+ G CK  R  +A  
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L + M   G+ PD    +TL
Sbjct: 327 LLNEMRERGVPPDLCTFTTL 346



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 112/201 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +   +D A+    ++   GL PD + Y  +I G+C    + +A+++ +++      P
Sbjct: 244 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L++  CKE R+ DA  + ++M E+G   ++ T++ LI GY     +  A  ++
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    + P+IV+Y+ LIDG+C++G +++A   +       + P+ VTY+ILI  +C+ 
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A    D M+  GI+P+
Sbjct: 424 GQVEDAFGFLDEMINKGILPN 444



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D    +  ++  R + PD++T+N ++         + A+ L + +    LKP  +
Sbjct: 107 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIV 166

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  ++   C+ G  D A  +F +M + G   +V +++ LI G+ +   ++ A  +Y+EM
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++VS+S LI    +RG M+ A+          L+PD V Y ++I G+C+AG  
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 286

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A+++ D M+  G +PD +  +TL
Sbjct: 287 SDALRVRDEMVGCGCLPDVVTYNTL 311



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 6/188 (3%)

Query: 24  EPDIITYNTIICGYCS---LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           E +  T N ++  YC     +++D  +   EK  CV   P+ +T  +++DA  + G  + 
Sbjct: 92  EVNTYTLNIMVHNYCKALEFDKVDAVISEMEK-RCVF--PDVVTHNVMVDARFRAGDAEA 148

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +   M+ KG K  +VTY+ ++ G  +S     A++V++EM +  ++P++ S++ILI 
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G +EEAL  +       + PD+V+++ LI  + + G+   AM     M   G++P
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 201 DGLLLSTL 208
           DG++ + +
Sbjct: 269 DGVIYTMV 276


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 119/210 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ P I TYN++I   C+L        L  ++   ++ PN
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+++G + NVVTY+ L+DG+     M  A  V++
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P++VSYS LI+G CK   +E+A+Y F       L+P+ VTY+ L+ G C  G
Sbjct: 338 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +    L DY
Sbjct: 398 RLQDAIALFHEMVTRGQIPDFVSYCILLDY 427



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 124/210 (59%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +G  PD+++Y+T+I GYC + R+++A+ LFE++   +L PN++T++ 
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 388

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  GR+ DA  +F +M+ +G   + V+Y  L+D   K++ +  A  + + +  +N
Sbjct: 389 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 448

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I  Y+I+IDG+C+ G +E A   F       L P+V TY I+I G C+ G   EA 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 508

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L+  M R G  P+G        YNL + G
Sbjct: 509 KLFGEMKRKGYSPNG------CTYNLITRG 532



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  RG+EP+++TYN ++ G+C  + +DEAV++F+ + C    P+
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++++ LI+ +CK  R++ A  +F +M  K    N VTYS L+ G      ++ A  ++ 
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ VSY IL+D LCK   ++EA+        +++ PD+  Y I+I G C+AG
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L+ ++   G+ P+
Sbjct: 468 ELEAARDLFSNLSSKGLHPN 487



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 35/239 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +   L LF ++   G +P+++TY T+I G C +     A++L   +     +P+ + 
Sbjct: 151 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVV 210

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG--PK---------------------------- 94
           +T +ID+ CK+ ++  A  +FS+M+ +G  P                             
Sbjct: 211 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270

Query: 95  -----ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                 NVV +S ++D   K   +  A DV + M +  + PN+V+Y+ L+DG C R  M+
Sbjct: 271 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 330

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EA+  F   +     PDVV+Y+ LI GYCK  R  +AM L++ M R  ++P+ +  STL
Sbjct: 331 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 104/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  H    L L  Q+   G+ P+I T N +I  +C L RL  A  +  K+  +  +PN
Sbjct: 78  ITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPN 137

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  LI   C EG++ +   +F KM+ +G + NVVTY  LI+G  K  +  +A  +  
Sbjct: 138 IATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLR 197

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N  P++V Y+ +ID LCK   + +A   F   +   + P + TY  LI   C   
Sbjct: 198 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 257

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  L + M+ + IMP+ ++ ST+ D
Sbjct: 258 EWKHVTALLNEMVNSKIMPNVVIFSTVVD 286



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P I  +  ++     +      + L  ++    + PN  T  I
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + N+ T++ LI G      +     ++++M    
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + T+A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 188 QLYDSMLRNGIMPD 201
            L+  M+  GI P 
Sbjct: 229 NLFSEMIHQGISPS 242



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           ++NT      + N LD+A+  F ++  +   P+   FT L+ +  K         +  +M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G   N+ T + LI+ +   Q +  AF V  ++ +    PNI +++ LI GLC  G +
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            E L+ F   +     P+VVTY  LI G CK G  + A++L  SM +    PD ++ +++
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 209 AD 210
            D
Sbjct: 215 ID 216



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 3/193 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A+ LF ++  RG  PD ++Y  ++   C   RLDEA+ L + +    + P+ 
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +TI+ID  C+ G ++ A  +FS +  KG   NV TY+ +I+G  +   +  A  ++ E
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     SPN  +Y+++  G  +       +      L      DV T  +L+      G 
Sbjct: 514 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 573

Query: 183 PTEAMQLYDSMLR 195
                Q+    L+
Sbjct: 574 DQSVKQILSEFLQ 586



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L   +    ++PDI  Y  +I G C    L+ A  LF  L+   L PN
Sbjct: 428 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C++G + +A+ +F +M  KG   N  TY+ +  G+ ++        + +
Sbjct: 488 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQ 547

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L++ L   GL
Sbjct: 548 EMLARGFSADVSTSTVLVEMLSDDGL 573


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 1/212 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL++   + D G +PD  +Y  +ICG+C +++++ A  LF ++    L PN +T+T LI
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +CK+ ++D AT +   M   G + NV TY+ LI G  K  N   A ++ + M E  I 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ +IDGLCK G    AL  F+  ++   LP+++TY+ LIR   + G+  EA  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  + R+G++PD +    + +  +  SG  EH
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIM-SGKVEH 688



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           M++  C    LD+AL++F Q+   G EP+ +TY+T+I G C   R++EA  L  ++    
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P + T T  I A C  G  +DA  +F  M  KG + NV TY+ LI G   S  +K A 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++  M  + + PN V+Y+ LI+ L +   ++ A    +    N   P++VTY  +I+GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435

Query: 178 CKAGRPTEAMQLYDSMLRNG 197
           C  G P +AM + ++ML+ G
Sbjct: 436 CILGDPKKAMLVMNNMLQRG 455



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 2/198 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +++A  LF ++ D GL P+ +TY  +I GYC   +LD A  L E +     +PN  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI    K+     A  +   M+E+G   NVVTY+ +IDG  K+ +   A +++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
            E    PN+++YS LI  L + G +EEA   F   L+ H L+PD +TY  +I  Y  +G+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A      M++ G  P
Sbjct: 686 VEHAFNFLGRMIKAGCQP 703



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ LF +++  G+ P+ +TYN +I       R+  A  +   +      PN +T+  
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C  G    A ++ + ML++G  AN+VTY+ +I GY  S N  SA  + + M +  
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  SY+ LI G CK   ME A   F+  +D+ L P+ VTY  LI GYCK  +   A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 188 QLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
            L + M R+G  P+     +L+  L   N   SG++E C
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQN-NFSGAEELC 588



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------- 53
           +L++   +  A  +   +   G  P+I+TYN +I GYC L    +A+ +   +       
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 54  -----------------TCVQL-----------KPNSITFTILIDAFCKEGRMDDATMMF 85
                            T   L           KP+  ++T LI  FCK  +M+ A  +F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           ++M++ G   N VTY+ LIDGY K + + +A  + E M  +   PN+ +Y++LI GL K+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                A       ++  + P+VVTY  +I G CK G  + A+++++ M+  G +P+ L  
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 206 STL 208
           S+L
Sbjct: 639 SSL 641



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 105/199 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +  + ++   G++P+++ YN +I   C    + +A  + +K+   ++ P++ T+T +I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C++  +D A  +F++M ++G + N VTYS LI+G   S  +  AFD+  EM  + I 
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   + +  I  LC  G  E+A   F    +    P+V TY  LI G C +G    A+ L
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGL 377

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           +  M R+G+ P+ +  + L
Sbjct: 378 FHRMSRDGVFPNTVTYNAL 396



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 87/173 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   G  P++ TYN +I G    N    A +L + +    + PN +
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G    A  MF+KM+E+G   N++TYS LI    +   ++ A +++ E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + P+ ++Y  +I+     G +E A       +     P + TY +LI+G
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +   A +L   + + G+ P+++TY  +I G C       A+++F K+      PN
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI A  +EG++++A  +F+++   G   + +TY  +I+ Y  S  ++ AF+   
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV------------- 168
            M +    P + +Y +LI GL    L+ +   A         LPDVV             
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA--------ALPDVVPNCSFGYQTTDQD 746

Query: 169 -------------------TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                                  L+     AGR  EA +L  SM+  G+ PD
Sbjct: 747 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)

Query: 82  TMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           TM F  ML + G +  +  YS L+    +     +  D Y  M    + PN++ Y+ +I+
Sbjct: 164 TMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVIN 223

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK G + +A        ++ + PD  TY  +I G+C+      A+Q+++ M + G  P
Sbjct: 224 ALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEP 283

Query: 201 DGLLLSTL 208
           + +  STL
Sbjct: 284 NTVTYSTL 291



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L G +  +GL PD   YN+++C    +  +D A+ +F+ ++    + +   +  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           A C+  R  +A + F  ML +    + V  + LIDG  +        D Y+++C
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR--------DGYKDLC 888



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  ++D A+ +F  ++ +G E  +  Y  +IC  C L+R  EA   FE +      P+
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 62  SITFTILIDAFCKEGRMD 79
            +   +LID   ++G  D
Sbjct: 869 DVVQAVLIDGLLRDGYKD 886



 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 2/160 (1%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           D GL   +   N ++    +  R  EA +L   +    L P+   +  L+ +  +   +D
Sbjct: 759 DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +F  M  +G + ++  Y  LI    +    K A   +E M     +P+ V  ++LI
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           DGL + G  +  +   H       +P    Y IL R   K
Sbjct: 877 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916



 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 24/226 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGY--------------------CSL--NRLDE 45
           ++ A    G++   G +P + TY  +I G                     CS      D+
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 745

Query: 46  AVQLFEKLTCVQLKPN-SITF-TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
                      +L P  S+     L+      GR  +A  +   M+ +G   +   Y+ L
Sbjct: 746 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           +    + +N+  A  V++ M       ++  Y  LI  LC+    +EA   F   L    
Sbjct: 806 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 865

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            PD V  A+LI G  + G     M+    M     MP   + + LA
Sbjct: 866 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 1/212 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL++   + D G +PD  +Y  +ICG+C +++++ A  LF ++    L PN +T+T LI
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +CK+ ++D AT +   M   G + NV TY+ LI G  K  N   A ++ + M E  I 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ +IDGLCK G    AL  F+  ++   LP+++TY+ LIR   + G+  EA  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  + R+G++PD +    + +  +  SG  EH
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIM-SGKVEH 688



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           M++  C    LD+AL++F Q+   G EP+ +TY+T+I G C   R++EA  L  ++    
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P + T T  I A C  G  +DA  +F  M  KG + NV TY+ LI G   S  +K A 
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++  M  + + PN V+Y+ LI+ L +   ++ A    +    N   P++VTY  +I+GY
Sbjct: 376 GLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY 435

Query: 178 CKAGRPTEAMQLYDSMLRNG 197
           C  G P +AM + ++ML+ G
Sbjct: 436 CILGDPKKAMLVMNNMLQRG 455



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 2/198 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +++A  LF ++ D GL P+ +TY  +I GYC   +LD A  L E +     +PN  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI    K+     A  +   M+E+G   NVVTY+ +IDG  K+ +   A +++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
            E    PN+++YS LI  L + G +EEA   F   L+ H L+PD +TY  +I  Y  +G+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLF-AELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A      M++ G  P
Sbjct: 686 VEHAFNFLGRMIKAGCQP 703



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ LF +++  G+ P+ +TYN +I       R+  A  +   +      PN +T+  
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C  G    A ++ + ML++G  AN+VTY+ +I GY  S N  SA  + + M +  
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  SY+ LI G CK   ME A   F+  +D+ L P+ VTY  LI GYCK  +   A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 188 QLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
            L + M R+G  P+     +L+  L   N   SG++E C
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQN-NFSGAEELC 588



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------- 53
           +L++   +  A  +   +   G  P+I+TYN +I GYC L    +A+ +   +       
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 54  -----------------TCVQL-----------KPNSITFTILIDAFCKEGRMDDATMMF 85
                            T   L           KP+  ++T LI  FCK  +M+ A  +F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           ++M++ G   N VTY+ LIDGY K + + +A  + E M  +   PN+ +Y++LI GL K+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                A       ++  + P+VVTY  +I G CK G  + A+++++ M+  G +P+ L  
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 206 STL 208
           S+L
Sbjct: 639 SSL 641



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 105/199 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +  + ++   G++P+++ YN +I   C    + +A  + +K+   ++ P++ T+T +I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C++  +D A  +F++M ++G + N VTYS LI+G   S  +  AFD+  EM  + I 
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGIL 317

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   + +  I  LC  G  E+A   F    +    P+V TY  LI G C +G    A+ L
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGL 377

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           +  M R+G+ P+ +  + L
Sbjct: 378 FHRMSRDGVFPNTVTYNAL 396



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 87/173 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   G  P++ TYN +I G    N    A +L + +    + PN +
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CK G    A  MF+KM+E+G   N++TYS LI    +   ++ A +++ E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + P+ ++Y  +I+     G +E A       +     P + TY +LI+G
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +   A +L   + + G+ P+++TY  +I G C       A+++F K+      PN
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI A  +EG++++A  +F+++   G   + +TY  +I+ Y  S  ++ AF+   
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV------------- 168
            M +    P + +Y +LI GL    L+ +   A         LPDVV             
Sbjct: 695 RMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA--------ALPDVVPNCSFGYQTTDQD 746

Query: 169 -------------------TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                                  L+     AGR  EA +L  SM+  G+ PD
Sbjct: 747 AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)

Query: 82  TMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           TM F  ML + G +  +  YS L+    +     +  D Y  M    + PN++ Y+ +I+
Sbjct: 164 TMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVIN 223

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK G + +A        ++ + PD  TY  +I G+C+      A+Q+++ M + G  P
Sbjct: 224 ALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEP 283

Query: 201 DGLLLSTL 208
           + +  STL
Sbjct: 284 NTVTYSTL 291



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L G +  +GL PD   YN+++C    +  +D A+ +F+ ++    + +   +  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           A C+  R  +A + F  ML +    + V  + LIDG  +        D Y+++C
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR--------DGYKDLC 888



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  ++D A+ +F  ++ +G E  +  Y  +IC  C L+R  EA   FE +      P+
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 62  SITFTILIDAFCKEGRMD 79
            +   +LID   ++G  D
Sbjct: 869 DVVQAVLIDGLLRDGYKD 886



 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 2/160 (1%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           D GL   +   N ++    +  R  EA +L   +    L P+   +  L+ +  +   +D
Sbjct: 759 DPGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +F  M  +G + ++  Y  LI    +    K A   +E M     +P+ V  ++LI
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           DGL + G  +  +   H       +P    Y IL R   K
Sbjct: 877 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916



 Score = 43.9 bits (102), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 24/226 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGY--------------------CSL--NRLDE 45
           ++ A    G++   G +P + TY  +I G                     CS      D+
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 745

Query: 46  AVQLFEKLTCVQLKPN-SITF-TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
                      +L P  S+     L+      GR  +A  +   M+ +G   +   Y+ L
Sbjct: 746 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           +    + +N+  A  V++ M       ++  Y  LI  LC+    +EA   F   L    
Sbjct: 806 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 865

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            PD V  A+LI G  + G     M+    M     MP   + + LA
Sbjct: 866 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 126/207 (60%), Gaps = 4/207 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ LF ++  +G++  ++TYN+++ G C   + ++   L + +   ++ PN ITF +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D F KEG++ +A  ++ +M+ +G   N++TY+ L+DGY     +  A ++ + M  N 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+IV+++ LI G C    +++ +  F       L+ + VTY+IL++G+C++G+   A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 188 QLYDSMLRNGIMPD----GLLLSTLAD 210
           +L+  M+ +G++PD    G+LL  L D
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCD 450



 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 121/201 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ P+IITYNT++ GYC  NRL EA  + + +   +  P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT LI  +C   R+DD   +F  + ++G  AN VTYS L+ G+ +S  +K A +++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  + + P++++Y IL+DGLC  G +E+AL  F     + +   +V Y  +I G CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A  L+ S+   G+ P+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPN 507



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 115/205 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +  ++ +R ++ D+ TY+TII   C    +D A+ LF+++    +K + +T+  L+ 
Sbjct: 212 AFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+ +D  ++   M+ +    NV+T++ L+D + K   ++ A ++Y+EM    ISP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ L+DG C +  + EA       + N   PD+VT+  LI+GYC   R  + M+++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
            ++ + G++ + +  S L     QS
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQS 416



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 114/204 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+ L  ++ + G +PD++TYN+I+ G C       A  +  K+    +K +  T
Sbjct: 171 EGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFT 230

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ +ID+ C++G +D A  +F +M  KG K++VVTY+ L+ G  K+        + ++M 
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I PN++++++L+D   K G ++EA   +   +   + P+++TY  L+ GYC   R +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA  + D M+RN   PD +  ++L
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSL 374



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 118/217 (54%), Gaps = 1/217 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C    A  + G++   G EPD  T+NT+I G C   ++ +AV L +++     +P+ +T+
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTY 196

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++  C+ G    A  M  KM E+  KA+V TYS +ID   +   + +A  +++EM  
Sbjct: 197 NSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I  ++V+Y+ L+ GLCK G   +        +   ++P+V+T+ +L+  + K G+  E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
           A +LY  M+  GI P+ +  +TL D Y +Q+  S+ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 112/214 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             +  L    QL   G+  +I T N +I  +C   +   A  +  K+  +  +P++ TF 
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  C EG++  A ++  +M+E G + ++VTY+ +++G  +S +   AFD+  +M E 
Sbjct: 163 TLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEER 222

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  ++ +YS +ID LC+ G ++ A+  F       +   VVTY  L+RG CKAG+  + 
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             L   M+   I+P+ +  + L D  ++    QE
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  +K+F  ++ RGL  + +TY+ ++ G+C   ++  A +LF+++    + P+ +T+ 
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  C  G+++ A  +F  + +      +V Y+ +I+G  K   ++ A++++  +   
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++Y+++I GLCK+G + EA        ++   P+  TY  LIR + + G  T +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L + M   G   D   +  + D
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVID 586



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ AL++F  L    ++  I+ Y TII G C   ++++A  LF  L C  +KPN +T+T
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   CK+G + +A ++  KM E G   N  TY+ LI  + +  ++ ++  + EEM   
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572

Query: 127 NISPNIVSYSILIDGL 142
             S +  S  ++ID L
Sbjct: 573 GFSADASSIKMVIDML 588



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSC 102
           D+A+ LF+++   +  P  + F+    A  +  + +   + F K LE  G   N+ T + 
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFN-LVLDFCKQLELNGIAHNIYTLNI 128

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           +I+ + +      A+ V  ++ +    P+  +++ LI+GLC  G + +A+      ++N 
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             PD+VTY  ++ G C++G  + A  +   M    +  D    ST+ D
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIID 236



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF  L  +G++P+++TY  +I G C    L EA  L  K+      PN  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           T+  LI A  ++G +  +  +  +M   G  A+  +   +ID     +  KS  D+
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 7/216 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD AL +  ++ D G EP+++TYN++I G C  N  D A +LFE +  V+  P+
Sbjct: 89  LWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPS 148

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-------KANVVTYSCLIDGYFKSQNMK 114
            +T+  L+D   + G+++ A  +F +ML++           NV+TYS LIDG  K+  + 
Sbjct: 149 MVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVS 208

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A ++ E M     SP++++Y+IL+DGLCK   +  A       LD   +P++VTY  L+
Sbjct: 209 QAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL 268

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            G C+A R ++A+ L   M   G  P+ +   TL D
Sbjct: 269 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 5/212 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   LD A +L   +  RG  PD+I Y+T+I G C   ++DEA  L+E +       +
Sbjct: 376 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDAD 435

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK GR+D+A ++ ++M+  G   + +TY+ LI G     ++  A ++ E
Sbjct: 436 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 495

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-----HCALDNHLLPDVVTYAILIRG 176
           EM  +N +P+ V+Y+ILI G+C+   ++ A+         C        D + Y+ LI G
Sbjct: 496 EMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDG 555

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            CKAGR  EA+  +  M+ NG++PD +  S L
Sbjct: 556 LCKAGRVAEALDYFQEMIDNGVIPDHITYSIL 587



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 7/214 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRG-------LEPDIITYNTIICGYCSLNRLDEAVQLFEKLT 54
           L +   L+ A+ LF ++ DR          P++ITY+ +I G C  NR+ +AV+L E + 
Sbjct: 159 LFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK 218

Query: 55  CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
                P+ IT+TIL+D  CKE ++  A  +  +ML+ G   N+VTY+ L+ G  +++ + 
Sbjct: 219 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS 278

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A  +  +M     +PN+V+Y  LIDGLCK G +++A       +D    PD++ Y +LI
Sbjct: 279 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 338

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G CKA +  E++ L    +  GI PD +  S++
Sbjct: 339 NGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  + AA ++  ++ D G  P+++TYN+++ G C   R+ +A+ L   +TC    PN
Sbjct: 236 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 295

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK GR+ DA  M + M++KG   +++ Y+ LI+G  K+  +  +  +  
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355

Query: 122 EMCENNISPNIVSYS-----------------------------------ILIDGLCKRG 146
                 I P++V+YS                                    LIDGLCK G
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 415

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++EA   +     +    DVVTY+ LI G CKAGR  EA  L   M+R G  P  +  +
Sbjct: 416 KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 475

Query: 207 TL 208
           +L
Sbjct: 476 SL 477



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +   + D+G  PD++ YN +I G C  +++DE++ L  +     +KP+
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +I   C+  R+D+A  +   +  +G   +V+ YS LIDG  K+  +  AFD+YE
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    ++V+YS LIDGLCK G ++EA       +     P  +TY  LI+G C   
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA++L + M R+   P  +  + L
Sbjct: 486 HLDEAIELVEEMERSNCAPSAVTYNIL 512



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 116/211 (54%), Gaps = 7/211 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A + F ++  + L P++   + +I G C   R  +A++ F  +    +  +++ +T
Sbjct: 24  EIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYT 83

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+    KE R+D A  +  +M + G + NVVTY+ LIDG  K+     A +++E M   
Sbjct: 84  ALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSV 143

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-------DNHLLPDVVTYAILIRGYCK 179
             SP++V+Y+ L+DGL + G +E A+  F   L       D+   P+V+TY++LI G CK
Sbjct: 144 ECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCK 203

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A R ++A++L +SM   G  PD +  + L D
Sbjct: 204 ANRVSQAVELLESMKARGCSPDVITYTILVD 234



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  T+  L+  FC+ G +D A   F +M  K    NV   S LIDG  K++    A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            +  M  + I  + V Y+ L+ GL K   +++AL   H   D+   P+VVTY  LI G C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K   P  A +L++ M      P  +  +TL D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLD 157


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 126/207 (60%), Gaps = 4/207 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ LF ++  +G++  ++TYN+++ G C   + ++   L + +   ++ PN ITF +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D F KEG++ +A  ++ +M+ +G   N++TY+ L+DGY     +  A ++ + M  N 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+IV+++ LI G C    +++ +  F       L+ + VTY+IL++G+C++G+   A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 188 QLYDSMLRNGIMPD----GLLLSTLAD 210
           +L+  M+ +G++PD    G+LL  L D
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCD 450



 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 121/201 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE  L  A +L+ ++  RG+ P+IITYNT++ GYC  NRL EA  + + +   +  P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT LI  +C   R+DD   +F  + ++G  AN VTYS L+ G+ +S  +K A +++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  + + P++++Y IL+DGLC  G +E+AL  F     + +   +V Y  +I G CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A  L+ S+   G+ P+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPN 507



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 116/205 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ +R ++ D+ TY+TII   C    +D A+ LF+++    +K + +T+  L+ 
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+ +D  ++   M+ +    NV+T++ L+D + K   ++ A ++Y+EM    ISP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ L+DG C +  + EA       + N   PD+VT+  LI+GYC   R  + M+++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
            ++ + G++ + +  S L     QS
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQS 416



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A+ L  ++ + G +PD++TYN+I+ G C       A+ L  K+    +K +
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ +ID+ C++G +D A  +F +M  KG K++VVTY+ L+ G  K+        + +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I PN++++++L+D   K G ++EA   +   +   + P+++TY  L+ GYC   
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R +EA  + D M+RN   PD +  ++L
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSL 374



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 1/217 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C    A  + G++   G EPD  T+NT+I G     ++ EAV L +++     +P+ +T+
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++  C+ G    A  +  KM E+  KA+V TYS +ID   +   + +A  +++EM  
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I  ++V+Y+ L+ GLCK G   +        +   ++P+V+T+ +L+  + K G+  E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
           A +LY  M+  GI P+ +  +TL D Y +Q+  S+ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 110/214 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             +  L    QL   G+  +I T N +I  +C   +   A  +  K+  +  +P++ TF 
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI     EG++ +A ++  +M+E G + +VVTY+ +++G  +S +   A D+  +M E 
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  ++ +YS +ID LC+ G ++ A+  F       +   VVTY  L+RG CKAG+  + 
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             L   M+   I+P+ +  + L D  ++    QE
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  +K+F  ++ RGL  + +TY+ ++ G+C   ++  A +LF+++    + P+ +T+ 
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  C  G+++ A  +F  + +      +V Y+ +I+G  K   ++ A++++  +   
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++Y+++I GLCK+G + EA        ++   P+  TY  LIR + + G  T +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L + M   G   D   +  + D
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVID 586



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ AL++F  L    ++  I+ Y TII G C   ++++A  LF  L C  +KPN +T+T
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   CK+G + +A ++  KM E G   N  TY+ LI  + +  ++ ++  + EEM   
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572

Query: 127 NISPNIVSYSILIDGL 142
             S +  S  ++ID L
Sbjct: 573 GFSADASSIKMVIDML 588



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 89/190 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF ++      P ++ ++          + +  +   ++L    +  N  T  I+
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  +   A  +  K+++ G + +  T++ LI G F    +  A  + + M EN  
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ +++G+C+ G    AL       + ++  DV TY+ +I   C+ G    A+ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 189 LYDSMLRNGI 198
           L+  M   GI
Sbjct: 250 LFKEMETKGI 259



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSC 102
           D+A+ LF+++   +  P+ + F+    A  +  + +   + F K LE  G   N+ T + 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN-LVLDFCKQLELNGIAHNIYTLNI 128

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           +I+ + +      A+ V  ++ +    P+  +++ LI GL   G + EA+      ++N 
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             PDVVTY  ++ G C++G  + A+ L   M    +  D    ST+ D
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF  L  +G++P+++TY  +I G C    L EA  L  K+      PN  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           T+  LI A  ++G +  +  +  +M   G  A+  +   +ID     +  KS  D+
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 119/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++ +RGL+PD  +Y+T++ G C   ++D A+++FE  +     P+ + ++ 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK GR+D+A  +F KM E   + +VVT++ L+DG  K   ++ A  V E M + N
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+++YS LIDGLCK G + +A   F   +   + P+VVTY  LI G+C       A+
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M   G +PD +  +TL D
Sbjct: 427 LLMEEMTATGCLPDIITYNTLID 449



 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 122/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++F ++  RG+EP+++TYN++I G+C  N +D A+ L E++T     P+
Sbjct: 381 LCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 440

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID  CK GR  +A  +F  M  K    +V+TYSCLI G+ K + +  A  +++
Sbjct: 441 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 500

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + P++V++S L++G C  GL+++A       + +   PDV TY  L+ G+CK G
Sbjct: 501 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA ++   M + G  P+ +  + L D
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALID 589



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+AL L  ++T  G  PDIITYNT+I G C   R  EA +LF  +      P+ IT++ 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FCK  R+D A  +F  ML++    +VVT+S L++GY  +  +  A  + EEM  ++
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++ +Y+ L+DG CK G M EA             P+VVTY  LI  +C+AG+PT A 
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + M+ NG+ P+ +   +L
Sbjct: 602 RLLEEMVGNGVQPNVITYRSL 622



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D ALK+F   ++    PD++ Y+T+I G C   RLDEA +LFEK+     +P+
Sbjct: 276 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPD 335

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT L+D  CK  R+ +A  +   M ++    NV+TYS LIDG  K+  ++ A +V++
Sbjct: 336 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 395

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I PN+V+Y+ LI G C    ++ AL           LPD++TY  LI G CK G
Sbjct: 396 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 455

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA +L+  M      PD +  S L
Sbjct: 456 RAPEANRLFGDMKAKFCNPDVITYSCL 482



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A   F ++  +G  P+  TYN +I G+C ++++  A  L +++    L PN
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +I  FC++ ++D A  +F +M+E G   N+VTY+ L+ G  ++  M  A+++ +
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + P+  SY  L+ GLCK G ++ AL  F    +    PDVV Y+ LI G CKAG
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +L++ M  N   PD +  + L D
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMD 344



 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A KLF ++ +   EPD++T+  ++ G C  +RL EA Q+ E +      PN
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ LID  CK G++ DA  +F +M+ +G + NVVTY+ LI G+  +  + SA  + E
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA---------------------LYAFHCALD 160
           EM      P+I++Y+ LIDGLCK G   EA                     L    C L+
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 490

Query: 161 --------------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                           +LPDVVT++ L+ GYC AG   +A +L + M+ +   PD    +
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550

Query: 207 TLAD 210
           +L D
Sbjct: 551 SLVD 554



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 3/207 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++ + G  PD   YN +I   C      +A+  F  + C   + N
Sbjct: 69  LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC---EKN 125

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+TI+ID  CK  R+ +AT  F+KM +KG   N  TY+ LI+G+ K   +  A+ + +
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+ ++PN+V+YS +I G C++  ++ A   F   ++N  +P++VTY  L+ G C+ G
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA +L D M   G+ PD     TL
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTL 272



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 114/195 (58%), Gaps = 1/195 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF  +  + + PD++T++T++ GYC+   +D+A +L E++      P+  T+T
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D FCK GRM +A  +  +M ++G + NVVTY+ LID + ++     A+ + EEM  N
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            + PN+++Y  LI G C  G +EEA         D +   D+  Y +++ G C+ GR + 
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670

Query: 186 AMQLYDSMLRNGIMP 200
           A++L +++ ++G  P
Sbjct: 671 ALELLEAIKQSGTPP 685



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D A KLF Q+ + G  P+++TYNT++ G C    +DEA +L +++    L+P+  
Sbjct: 208 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 267

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+   CK G++D A  +F          +VV YS LI G  K+  +  A  ++E+M
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN+  P++V+++ L+DGLCK   ++EA        D +  P+V+TY+ LI G CK G+ 
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +++  M+  GI P+ +  ++L
Sbjct: 388 RDAQEVFKRMIVRGIEPNVVTYNSL 412



 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 111/197 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ + GL P+++TY+T+I G+C   ++D A +LF ++      PN +T+  L+   C
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G MD+A  +  +M E+G + +  +Y  L+ G  K+  +  A  V+E+    +  P++V
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +YS LI GLCK G ++EA   F    +N   PDVVT+  L+ G CK  R  EA Q+ ++M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 194 LRNGIMPDGLLLSTLAD 210
                 P+ +  S+L D
Sbjct: 363 EDRNCTPNVITYSSLID 379



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 105/195 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A +LFG +  +   PD+ITY+ +I G+C L R+D A  LF+ +    + P+
Sbjct: 451 LCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 510

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ L++ +C  G +DDA  +  +M+      +V TY+ L+DG+ K   M  A  V +
Sbjct: 511 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 570

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    PN+V+Y+ LID  C+ G    A       + N + P+V+TY  LI G+C  G
Sbjct: 571 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTG 630

Query: 182 RPTEAMQLYDSMLRN 196
              EA ++ + + R+
Sbjct: 631 DLEEARKILERLERD 645



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 6/202 (2%)

Query: 9   DAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           DAAL+ F   +  +G + ++ TYN +        R+DE   + +      + PN  T+ +
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
           +I   CK G +D A  +  +M E GP  +   Y+ +I    K++N   A D +  M CE 
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               N+++++I+IDGLCK   + EA   F        +P+  TY +LI G+CK  +   A
Sbjct: 125 ----NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L   M  +G+ P+ +  ST+
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTV 202



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 2/143 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILI 69
           A +L  ++   G++P++ITY ++I G+C    L+EA ++ E+L   +  K +   + +++
Sbjct: 600 AYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMM 659

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  C+ GRM  A  +   + + G       Y  LI G  + + +  A +V EEM  +  S
Sbjct: 660 DGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS 719

Query: 130 -PNIVSYSILIDGLCKRGLMEEA 151
            PN  +Y  +I  L + G  EEA
Sbjct: 720 RPNAEAYEAVIQELAREGRHEEA 742



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKP 60
           L +   + AAL+L   +   G  P    Y  +I G C    L +A+++ E++T   + +P
Sbjct: 662 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 721

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKML 89
           N+  +  +I    +EGR ++A  +  ++L
Sbjct: 722 NAEAYEAVIQELAREGRHEEANALADELL 750


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 125/207 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++ AA   F ++  +GL+P+I+TYN++I G  +  +LDEA+ L++K+  + LKPN +
Sbjct: 285 KDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIV 344

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+ FCK+  + +A  +F  + E+    N +T++ +ID + K+  M+  F ++  M
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I PN+ +Y+ LI GLC+   +  A    +   +  L  DVVTY ILI G+CK G P
Sbjct: 405 LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEP 464

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   ML  G+ P+ +  +TL D
Sbjct: 465 SKAEKLLGEMLNVGVKPNHVTYNTLMD 491



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 113/190 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ L+ ++   GL+P+I+T+N +I G+C    + EA +LF+ +    L PN+ITF  
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +IDAFCK G M++   + + ML++G   NV TY+CLI G  ++QN+++A  +  EM    
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  ++V+Y+ILI G CK G   +A       L+  + P+ VTY  L+ GYC  G    A+
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 188 QLYDSMLRNG 197
           ++   M + G
Sbjct: 504 KVRTQMEKEG 513



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 116/203 (57%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC---SLNRLDEAVQLFEKLTCVQL 58
           L K   L+ A  +   +   G  P+I+TYNT+I G+C   S  ++  A  + +++   ++
Sbjct: 210 LCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKI 269

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN ITF  LID FCK+  +  A   F +M  +G K N+VTY+ LI+G   +  +  A  
Sbjct: 270 CPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIA 329

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++++M    + PNIV+++ LI+G CK+ +++EA   F    +  L+P+ +T+  +I  +C
Sbjct: 330 LWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFC 389

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           KAG   E   L++SML  GI P+
Sbjct: 390 KAGMMEEGFALHNSMLDEGIFPN 412



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 114/200 (57%), Gaps = 3/200 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++  R ++P++ T+N  I G C   +L++A  + E +      PN +T+  LID  C
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHC 246

Query: 74  KEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           K+G   +M  A  +  +ML      N +T++ LIDG+ K +N+ +A + +EEM    + P
Sbjct: 247 KKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKP 306

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+ LI+GL   G ++EA+  +   +   L P++VT+  LI G+CK     EA +L+
Sbjct: 307 NIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLF 366

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D +    ++P+ +  +T+ D
Sbjct: 367 DDIAEQDLVPNAITFNTMID 386



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 92/170 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++    L   + D G+ P++ TYN +I G C    +  A +L  ++   +LK + +
Sbjct: 390 KAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVV 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI  +CK+G    A  +  +ML  G K N VTY+ L+DGY    N+K+A  V  +M
Sbjct: 450 TYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
            +     N+V+Y++LI G CK G +E+A    +  L+  L P+  TY ++
Sbjct: 510 EKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 3/211 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +    + +A ++F ++ D G +  + + N ++      N   E   +++++   +++PN 
Sbjct: 141 VTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNL 200

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK---SQNMKSAFDV 119
            TF I I+  CK G+++ A  +   +   G   N+VTY+ LIDG+ K   +  M  A  +
Sbjct: 201 TTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAI 260

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +EM  N I PN ++++ LIDG CK   +  A  AF       L P++VTY  LI G   
Sbjct: 261 LKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSN 320

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            G+  EA+ L+D M+  G+ P+ +  + L +
Sbjct: 321 NGKLDEAIALWDKMVGLGLKPNIVTFNALIN 351



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 88/147 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  ++ AA KL  ++ +  L+ D++TYN +I G+C      +A +L  ++  V +KPN
Sbjct: 423 LCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPN 482

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D +C EG +  A  + ++M ++G +ANVVTY+ LI G+ K+  ++ A  +  
Sbjct: 483 HVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLN 542

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLM 148
           EM E  ++PN  +Y ++   + ++G +
Sbjct: 543 EMLEKGLNPNRTTYDVVRLEMLEKGFI 569



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 5/207 (2%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           DR     +IT + ++  Y +   +  A ++F ++     K +  +   L+ A  K     
Sbjct: 124 DRPCANALIT-DMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETG 182

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +   ++ +M+++  + N+ T++  I+G  K+  +  A DV E++     SPNIV+Y+ LI
Sbjct: 183 EMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLI 242

Query: 140 DGLCKR---GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           DG CK+   G M  A       L N + P+ +T+  LI G+CK      A   ++ M R 
Sbjct: 243 DGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ 302

Query: 197 GIMPDGLLLSTLADYNLQSSGSQEHCI 223
           G+ P+ +  ++L +  L ++G  +  I
Sbjct: 303 GLKPNIVTYNSLIN-GLSNNGKLDEAI 328


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 120/191 (62%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+LF  +T RG+  D++ YN++I G CS+ +  EA +L   +    + P+  TF IL+D
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVD 273

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEGR+ +A  +F+ M+++G K ++VTY+ L++G+  S N+  A +++  M +  + P
Sbjct: 274 ALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEP 333

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y++LI+G CK  +++EA+  F      +L+P++ TY  LI G CK GR +   +L 
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393

Query: 191 DSMLRNGIMPD 201
           D M   G  PD
Sbjct: 394 DEMCDRGQSPD 404



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A +LF ++  RGLEPD++ YN +I GYC ++ +DEA+ LF+++ C  L PN  T+ 
Sbjct: 315 NVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYN 374

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK GRM     +  +M ++G   ++VTY+  +D + KS+  + A  ++ ++ + 
Sbjct: 375 SLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQG 434

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+   Y ++++  CK   ++ A  A    L +   P+V TY I+I   CK     EA
Sbjct: 435 -IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEA 493

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M L   M  N   PD +   T+
Sbjct: 494 MTLLSKMDDNDCPPDAVTFETI 515



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++  H   A+ LF QL  +G+ P I T   +I  YC    L  A  L   +  +  +PN
Sbjct: 65  IVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPN 124

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ FC  G +  A      ++ KG   +  +Y  LI+G  K+   + A  + +
Sbjct: 125 MVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQ 184

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E+ + PN+++YS +IDGLCK  L+ +AL  F       +L DVV Y  LI G C  G
Sbjct: 185 KMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVG 244

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +L   M+R  I PD    + L D
Sbjct: 245 QWREATRLLTMMVRGNINPDDYTFNILVD 273



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +  RG +PDI+TYN ++ G+C  N + EA +LF ++    L+P+
Sbjct: 275 LCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPD 334

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LI+ +CK   +D+A ++F ++  K    N+ TY+ LIDG  K   M    ++ +
Sbjct: 335 VLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVD 394

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC+   SP+IV+Y+I +D  CK    E+A+  F   +   + PD   Y +++  +CK  
Sbjct: 395 EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQG-IWPDFYMYDVIVENFCKGE 453

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A +    +L +G  P+
Sbjct: 454 KLKIAEEALQHLLIHGCCPN 473



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 43/249 (17%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN---------RLD----------- 44
           + HL  A  L G +   G +P+++T+NT+I G+C +N         RLD           
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFC-INGMVSKAMAFRLDLMAKGYPLDEF 161

Query: 45  ----------------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                           +A+QL +K+    ++PN IT++ +ID  CK+  + DA  +FS +
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLV 221

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G   +VV Y+ LI G       + A  +   M   NI+P+  +++IL+D LCK G +
Sbjct: 222 TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI 281

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F   +     PD+VTY  L+ G+C +   +EA +L++ M++ G+ PD L     
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVL----- 336

Query: 209 ADYNLQSSG 217
            +YN+  +G
Sbjct: 337 -NYNVLING 344



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 2/173 (1%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
             + +D+ +  F ++      P    F  L+ A  + G    A  +FS++  KG   ++ 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + LI+ Y    ++  AF +   + +    PN+V+++ LI+G C  G++ +A+ AF   
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAM-AFRLD 150

Query: 159 LDNHLLP-DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L     P D  +Y  LI G CK G+  +A+QL   M  + + P+ +  ST+ D
Sbjct: 151 LMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVID 203



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 1/120 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A+ LF Q+  +G+ PD   Y+ I+  +C   +L  A +  + L      PN  T+TI+
Sbjct: 422 EKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIM 480

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+A CK+   D+A  + SKM +     + VT+  +I    +      A  +  EM E  +
Sbjct: 481 INALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 116/196 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A  L+ ++  RG+ PD+ITY T+ICG+C   +L EA  L  ++    + PN
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LID  CKEG++ ++  + + M +KG K +VV YS L+DGY     ++ A  ++ 
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++P++ SY+I+I+GLCK   ++EA+      L  +++PD VTY+ LI G CK G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339

Query: 182 RPTEAMQLYDSMLRNG 197
           R T  + L   M   G
Sbjct: 340 RITTILDLTKEMHHRG 355



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 111/196 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A ++F  +   G+ PD+ +YN II G C   R+DEA+ L  ++    + P+++T++ 
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+     +  +M  +G  AN+VTY+ L+DG  K+QN+  A  ++ +M E  
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN  +Y+ LIDGLCK G +++    F   L      DV TY ++I G CK G   EA+
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 188 QLYDSMLRNGIMPDGL 203
            +   M  NG +P+ +
Sbjct: 451 AMKSKMEDNGCIPNAV 466



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 112/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL   + DR   PD++ Y+TII G C    +DEA  L+ ++    + P+ IT+T LI 
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  G++ +A  + ++M+ K    N+ TY+ LID   K   +K + ++   M +  + P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V YSIL+DG C  G +++A   F   +   + PDV +Y I+I G CK  R  EAM L 
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             ML   ++PD +  S+L D
Sbjct: 314 REMLHKNMIPDTVTYSSLID 333



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 107/196 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  +  L   +T +G++PD++ Y+ ++ GYC +  + +A Q+F  +    + P+
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ I+I+  CK  R+D+A  +  +ML K    + VTYS LIDG  K   + +  D+ +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK 349

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       N+V+Y+ L+DGLCK   +++A+  F    +  + P+  TY  LI G CK G
Sbjct: 350 EMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGG 409

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +   L+  +L  G
Sbjct: 410 RLKKGQALFQHLLVKG 425



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 108/194 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  +L    ++  +G + D ++Y  ++ G C +     A++L   +     +P+ + ++ 
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+  +D+A  ++S+M  +G   +V+TY+ LI G+  +  +  AF +  EM   N
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+PNI +Y+ LID LCK G ++E+           + PDVV Y+IL+ GYC  G   +A 
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAK 275

Query: 188 QLYDSMLRNGIMPD 201
           Q++  M++ G+ PD
Sbjct: 276 QIFLVMVQTGVNPD 289



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  + G++   G +P+ I  NT++ G C    + +++   +K+     + + 
Sbjct: 56  CHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQ 115

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++ IL++  CK G    A  +   + ++  + +VV YS +IDG  K + +  A+D+Y E
Sbjct: 116 VSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSE 175

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++++Y+ LI G C  G + EA    +  +  ++ P++ TY  LI   CK G+
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK 235

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             E+  L   M + G+ PD ++ S L D
Sbjct: 236 VKESKNLLAVMTKKGVKPDVVIYSILMD 263



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    + L  Q+  +G+ PD++T + +I  +C L ++  +  +  K+  +  +PN
Sbjct: 20  LVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPN 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I    L+   C +G +  +     K++ +G + + V+Y  L++G  K    + A  +  
Sbjct: 80  TIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLR 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + + +  P++V YS +IDGLCK  L++EA   +       + PDV+TY  LI G+C AG
Sbjct: 140 TIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L + M+   I P+    +TL D
Sbjct: 200 QLMEAFGLLNEMILKNINPNIYTYNTLID 228



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P II +  I+     +      + L +++    + P+ +T +ILI+ FC  G+M  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             K+L+ G + N +  + L+ G      +K +   ++++       + VSY IL++GLCK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G    A+       D    PDVV Y+ +I G CK     EA  LY  M   GI PD + 
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 205 LSTL 208
            +TL
Sbjct: 188 YTTL 191



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P  I F  ++ +  K         +  +M  KG   ++VT S LI+ +     M  +F V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             ++ +    PN +  + L+ GLC +G ++++L+     +      D V+Y IL+ G CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            G    A++L  ++      PD ++ ST+ D
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIID 158


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 127/207 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++ ++D A ++F ++ D G  P+  TY+ ++ G+C +  +   ++L+E++T  +  P+
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    +ID  CK  ++DDA  +  +M + G   +VVTY+ L+DG  K+  +  A +++ 
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N  +P+IVSYS++++GLCK   + +A   F   ++  L+PDVVT+ IL+ G CKAG
Sbjct: 352 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L D M  + ++PDG+  +TL
Sbjct: 412 KLDEAKDLLDVMSEHNVLPDGVTCTTL 438



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 126/228 (55%), Gaps = 37/228 (16%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + ++G EPD++TY+TII G C   ++ EA+++ E++T   + P+  T+TI++D  C+ G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +D+A  +F KM+E+G  AN V Y+ LI+G  K +N++ A+ + EEM      P+ ++Y+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 138 LIDGLCKRGLMEEA---------------LYAFHCAL----------------------D 160
           ++ GLC+ G + EA               + A++  L                      D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + PD++TY  LI G+C+  +  EAM+L+  ++  G MPD +  +++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSI 228



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 128/246 (52%), Gaps = 37/246 (15%)

Query: 2   LIKECHLDAALKLFG--QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           L KE  +  A  LF    + DR + PD+ITYNT+I G+C + + DEA++LF+ +      
Sbjct: 160 LYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYM 219

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+++T+  ++    ++  MD+A  MF KM++ G   N  TYS ++ G+ +  NM    ++
Sbjct: 220 PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279

Query: 120 YEEMCENNISPNI-----------------------------------VSYSILIDGLCK 144
           YEEM E   SP++                                   V+Y+IL+DGLCK
Sbjct: 280 YEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
             L+++A   F   +DN   PD+V+Y++++ G CK  +  +A  L+D M+   ++PD + 
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 399

Query: 205 LSTLAD 210
            + L D
Sbjct: 400 FNILMD 405



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 122/201 (60%), Gaps = 4/201 (1%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L+L+ ++T++   PD++  N +I   C   ++D+A ++ E+++ +   P+ +T+ IL+D 
Sbjct: 277 LELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
            CK   +D A  +FS M++ G   ++V+YS +++G  K+  +  A  +++ M E  + P+
Sbjct: 337 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +V+++IL+DGLCK G ++EA        ++++LPD VT   L+ G C+  R  EA++L+ 
Sbjct: 397 VVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456

Query: 192 SMLRNG----IMPDGLLLSTL 208
            M+  G    ++P  ++L+ L
Sbjct: 457 YMVEKGTVADVLPHNIVLAGL 477



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 2/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +LF  + D G  PDI++Y+ ++ G C  N++ +A  LF+++   +L P+ +TF I
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK G++D+A  +   M E     + VT + L+ G  + +    A  +++ M E  
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRPTE 185
              +++ ++I++ GLC+ G + +AL  F   +  D    PDVVTY  L+    +AGR  +
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A+  +  M  +G  PD +  +TL
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTL 545



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K   +D A K+  +++  G  PD++TYN ++ G C  N +D+A +LF  +      P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + ++++++++  CK  ++ DA ++F +M+E+    +VVT++ L+DG  K+  +  A D+ 
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M E+N+ P+ V+ + L+ GLC+    +EA+  F   ++   + DV+ + I++ G C+ 
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 181 GRPTEAMQLYDSMLRNG--IMPDGLLLSTLAD 210
           G+  +A+  + SM+++     PD +  +TL +
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVN 512



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 111/202 (54%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  LF ++ +R L PD++T+N ++ G C   +LDEA  L + ++   + P+
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPD 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T T L+   C++ R D+A  +F  M+EKG  A+V+ ++ ++ G  +   +  A   ++
Sbjct: 432 GVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFK 491

Query: 122 EMCENN--ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            M +++   SP++V+Y+ L++ L + G +++A+  F     +   PD V Y  L+ G  K
Sbjct: 492 SMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRK 551

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            GR  +A +L  +M   G + D
Sbjct: 552 QGRHIQADRLTQAMKEKGFLSD 573


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 115/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  + +RG+ PD+ +Y  +I GYC   R+DEAV LF ++ C  +  + + ++ LID
Sbjct: 348 ARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLID 407

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+  A  +FS +   GP  NV+TY+ LID + K Q++    ++++ MC   ++P
Sbjct: 408 GLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 467

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ILI+G CK   + EA+         +L PD +TY  L  G CK+GR ++A +L+
Sbjct: 468 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 527

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M   G   D    + L D
Sbjct: 528 KVMHVGGPPVDVATYNVLLD 547



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 124/200 (62%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++ D G++PDI+TY ++I G+C   +  E  QL  ++    + PN  TF +LID
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFC++G+M +A  MF+ M+++G + ++VT++ LI G+    N+  A  +++ + E  I P
Sbjct: 303 AFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILP 362

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ SY+ILI G CK   ++EA+  F+     +++ D+V Y+ LI G CK+GR + A +L+
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELF 422

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
            ++  +G  P+ +  + L D
Sbjct: 423 STINNDGPPPNVITYNILID 442



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 115/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +  RG +PDI+T+NT+I G+C    + EA +LF+ +    + P+  ++TILI 
Sbjct: 313 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 372

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK  R+D+A  +F++M  K    ++V YS LIDG  KS  +  A++++  +  +   P
Sbjct: 373 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 432

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ILID  CK   ++  +  F       L P V+TY ILI GYCK+ R  EAM L 
Sbjct: 433 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLL 492

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M    + PD +  ++L D
Sbjct: 493 SVMQSKNLAPDSITYNSLFD 512



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 110/195 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A+     +  +G+  D + Y T+I G C + R  +A QL +++    +KPN + + 
Sbjct: 169 EVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYN 228

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID+FCK+     A  ++ K+++ G   +++TY+ LI G+ ++        +  EM   
Sbjct: 229 MIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK 288

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI+PN+ ++++LID  C++G M EA   F+  +     PD+VT+  LI G+C  G   EA
Sbjct: 289 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 348

Query: 187 MQLYDSMLRNGIMPD 201
            +L+D++   GI+PD
Sbjct: 349 RKLFDTVFERGILPD 363



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 109/200 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  + ++P+I+ YN II  +C      +A  L+ K+  + + P+ +T+T LI 
Sbjct: 208 AFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIR 267

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+ G+  +   +  +M+ K    NV T++ LID + +   M  A  ++  M +    P
Sbjct: 268 GFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQP 327

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+++ LI G C  G + EA   F    +  +LPDV +Y ILI GYCK  R  EA+ L+
Sbjct: 328 DIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 387

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M    ++ D +L S+L D
Sbjct: 388 NEMRCKNMVLDIVLYSSLID 407



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 100/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K  H   A+ L  Q+  +G+ P I T +  I  YC L  +  A  +   +     +PN
Sbjct: 94  VVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPN 153

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT T ++   C  G +  A      +  +G   + V Y  LI+G  K      AF + +
Sbjct: 154 NITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQ 213

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PNIV Y+++ID  CK  L  +A   +   +D  + PD++TY  LIRG+C+ G
Sbjct: 214 EMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG 273

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  E  QL   M+   I P+    + L D
Sbjct: 274 QWGEVKQLMCEMVNKNINPNVYTFNVLID 302



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 63/106 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++LF  +  +GL P ++TYN +I GYC   R+ EA+ L   +    L P+SIT+  
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           L D  CK GR+ DA  +F  M   GP  +V TY+ L+D + K+Q++
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 79/143 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +LF  + + G  P++ITYN +I  +C +  +D  ++LF+ +    L P 
Sbjct: 409 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 468

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILI+ +CK  R+ +A  + S M  K    + +TY+ L DG  KS  +  A+++++
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528

Query: 122 EMCENNISPNIVSYSILIDGLCK 144
            M       ++ +Y++L+D  CK
Sbjct: 529 VMHVGGPPVDVATYNVLLDAFCK 551



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 98/201 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF  L +    P +I +NTII     +     A+ L +++    + P+  T +I
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I+ +C  G M  A  +   +L++G + N +T + ++ G   +  ++ A D ++ +    
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  + V Y  LI+GLCK G   +A           + P++V Y ++I  +CK     +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            LY  ++  GI PD L  ++L
Sbjct: 245 DLYLKIVDMGIDPDILTYTSL 265



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           S N +D+AV LF  L  +Q  P+ I F  +I +  K      A  +  +M+ KG   ++ 
Sbjct: 61  SFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIF 120

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T S  I+ Y     M  AF V   + +    PN ++ + ++ GLC  G +++A+      
Sbjct: 121 TLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNV 180

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +L D V Y  LI G CK GR  +A QL   M    + P+ ++ + + D
Sbjct: 181 AAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  LF  +  +GL P+ +TY+ +I  +C   +LD A+    K+T V +K    
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LI   CK G++  A  +F +M+  G K NVV Y+ LI GY K   + +AF +Y EM
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISPN  +++ LI GLC    M EA   F   ++ +++P+ VTY +LI G+CK G  
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A +L D M+  G++PD
Sbjct: 547 VRAFELLDEMVEKGLVPD 564



 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++ +A  L  ++   G+ P +  YN +I   C   +LDEA  LF  +    L PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ILID+FCK G++D A     KM E G KA V  YS LI G+ K   +++A  +++
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N + PN+V Y+ LI G CK G +  A   +H      + P+  T+  LI G C A 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +L+  M+   ++P+ +  + L +
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIE 538



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 106/190 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD AL   G++T+ G++  +  Y+++I G+C L +L  A  LF+++    LKPN +
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI  +CKEG + +A  ++ +M  KG   N  T++ LI G   +  M  A  ++ EM
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E N+ PN V+Y++LI+G CK G    A       ++  L+PD  TY  LI G C  GR 
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 184 TEAMQLYDSM 193
           +EA +  + +
Sbjct: 582 SEAREFMNDL 591



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A +L  ++ ++GL PD  TY  +I G CS  R+ EA +    L   Q K N +
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEM 601

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ L+  +CKEGR+DDA     +ML +G   ++V YS LI G  + Q+ +S  D+ ++M
Sbjct: 602 CFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQM 661

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y+ +ID   K G ++ A   +   +    LP+VVTY  LI G CK G  
Sbjct: 662 HDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLM 721

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            +A  L   ML +  +P+    +   DY L S G+ E  I
Sbjct: 722 DKAELLCREMLASNSLPNQNTYACFLDY-LTSEGNIEKAI 760



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A  L+  +   G  P+++TY  +I G C +  +D+A  L  ++      PN  
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 741

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   +D    EG ++ A  +   +LE G  AN VTY+ LI G+ K   ++ A +V   M
Sbjct: 742 TYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 800

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ ISP+ +SYS +I   C+RG ++EA+  +   L+  + PD V Y  LI G C  G  
Sbjct: 801 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 860

Query: 184 TEAMQLYDSMLRNGIMPD 201
           T+A +L D M+R G+ P+
Sbjct: 861 TKAFELRDDMMRRGVKPN 878



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 109/213 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A +L+ ++T +G+ P+  T+  +I G C  NR+ EA +LF ++    + PN +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI+  CKEG    A  +  +M+EKG   +  TY  LI G   +  +  A +   ++
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                  N + +S L+ G CK G +++AL A    L   +  D+V Y++LI G  +    
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDR 651

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
              + L   M   G+ PD +L +T+ D N ++ 
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAG 684



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD AL    ++  RG+  D++ Y+ +I G          + L +++    L+P+++
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +IDA  K G +  A  ++  M+ +G   NVVTY+ LI+G  K   M  A  +  EM
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 731

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +N  PN  +Y+  +D L   G +E+A+   H  L    L + VTY ILIRG+CK GR 
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKAI-QLHDVLLEGFLANTVTYNILIRGFCKLGRI 790

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA ++  +M+ +GI PD +  ST+
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTI 815



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 97/207 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    +A  ++  ++ + G  P     + ++ G      +  A  L  K+    + P+
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LI++ CK+G++D+A  +F+ M  KG   N VTYS LID + K   +  A     
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I   +  YS LI G CK G +  A   F   + N L P+VV Y  LI GYCK G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +LY  M   GI P+    + L
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTAL 501



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   L+ +GL  D+ TY T++ G C +   +   ++  ++      P+
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPS 319

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + L+D   K+G +  A  + +K+ + G   ++  Y+ LI+   K   +  A  ++ 
Sbjct: 320 EAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN 379

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN V+YSILID  CKRG ++ AL+      +  +   V  Y+ LI G+CK G
Sbjct: 380 NMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLG 439

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A  L+D M+ NG+ P+ ++ ++L
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSL 466



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 98/188 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++ G++   G +  + TYN  I G C   R+ EAV++   L+   L+ +  T+  L+ 
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    +    M ++M+E G   +    S L+DG  K  N+ SAFD+  ++ +  ++P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  Y+ LI+ +CK G ++EA   F+      L P+ VTY+ILI  +CK G+   A+   
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 191 DSMLRNGI 198
             M   GI
Sbjct: 414 GKMTEVGI 421



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 98/209 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+      AL LF ++   GL PD+  Y  ++   C L     A ++  ++       +
Sbjct: 190 LIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLS 249

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ + I   CK  R+ +A  + + +  KG +A+V TY  L+ G  K +  ++  ++  
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+  + S L+DGL K+G +  A    +      + P +  Y  LI   CK G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L+++M   G+ P+ +  S L D
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDVTYSILID 398



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 1/142 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E +++ A++L   L + G   + +TYN +I G+C L R+ EA ++   +    + P+
Sbjct: 750 LTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I+++ +I  +C+ G + +A  ++  ML +G   + V Y+ LI G   +  +  AF++ +
Sbjct: 809 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 868

Query: 122 EMCENNISPNIVSYSILIDGLC 143
           +M    + PN  +Y+ LI G C
Sbjct: 869 DMMRRGVKPNRATYNSLIHGTC 890



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 66/140 (47%)

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ F +LI  + +  R  D  ++   M++ G    + T S +++G  + +  + A  +++
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  + + P++  Y+ ++  LC+      A         +     V TY + IRG CK  
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA+++ + +   G+  D
Sbjct: 265 RVWEAVEIKNLLSYKGLRAD 284


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 117/210 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ PDI TY ++I   C+L        L  ++   ++ P+
Sbjct: 217 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+ +G + NVVTY+ L+DG+     M  A  V++
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 336

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N  +PN++SY+ LI+G CK   M++A Y F       L+P+ VTY  L+ G C  G
Sbjct: 337 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVG 396

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+ +G +PD      L DY
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRILLDY 426



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 121/211 (57%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +D A+K+F  +   G  P++I+YNT+I GYC + R+D+A  LFE++   +L PN++T
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  L+   C  GR+ DA  +F +M+  G   ++ TY  L+D   K  ++  A  + + + 
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            +N+ P+I  Y+I+IDG+C+ G +E A   F       L P+V TY I+I G C+ G   
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           EA +L+  M  NG  PDG   +T+    LQ+
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 105/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
               L  Q+   G+ PD+ T N +I  +C LNR   A  +  K+  + L+P++ TFT LI
Sbjct: 85  TVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLI 144

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C EG++ DA  +F KM+ +G + NVVTY  LI+G  K  N  +A  +   M + N  
Sbjct: 145 RGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ 204

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C          L
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+ + IMPD ++ ST+ D
Sbjct: 265 LNQMINSKIMPDVVIFSTVVD 285



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 109/196 (55%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C       L  Q+ +  + PD++ ++T++   C   ++ EA  + + +    ++PN +T+
Sbjct: 256 CEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTY 315

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             L+D  C +  MD+A  +F  M+  G   NV++Y+ LI+GY K Q M  A  ++EEMC+
Sbjct: 316 NALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQ 375

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + PN V+Y+ L+ GLC  G +++A+  FH  + +  +PD+ TY IL+   CK     E
Sbjct: 376 KELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDE 435

Query: 186 AMQLYDSMLRNGIMPD 201
           AM L  ++  + + PD
Sbjct: 436 AMALLKTIEGSNMDPD 451



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  RG+EP+++TYN ++ G+C  + +DEAV++F+ +      PN
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I++  LI+ +CK  RMD AT +F +M +K    N VTY+ L+ G      ++ A  ++ 
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH 406

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++ +Y IL+D LCK+  ++EA+        +++ PD+  Y I+I G C+AG
Sbjct: 407 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 466

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  ++ ++   G+ P+
Sbjct: 467 ELEAARDIFSNLSSKGLRPN 486



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 114/206 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G +P+++TY T+I G C +   + A++L   +     +P+ + 
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T +ID+ CK+ ++ +A  +FSKM+ +G   ++ TY+ LI         K    +  +M 
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I P++V +S ++D LCK G + EA       +   + P+VVTY  L+ G+C      
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA++++D+M+ NG  P+ +  +TL +
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLIN 355



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL+    A  +  ++   GL+PD  T+ T+I G C   ++ +A+ LF+K+     +PN 
Sbjct: 113 CHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNV 172

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LI+  CK G  + A  +   M +   + +VV Y+ +ID   K + +  AF+++ +
Sbjct: 173 VTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSK 232

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP+I +Y+ LI  LC     +      +  +++ ++PDVV ++ ++   CK G+
Sbjct: 233 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            TEA  + D M+  G+ P+ +  + L D
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMD 320



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P  + +N ++       +      L  ++    + P+  T  I
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R   A  + +K+L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + TEA 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  GI PD    ++L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSL 248



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 75/142 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ HLD A+ L   +    ++PDI  Y  +I G C    L+ A  +F  L+   L+PN
Sbjct: 427 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 486

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C+ G +D+A  +F +M   G   +  TY+ +  G  +++    A  + +
Sbjct: 487 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 546

Query: 122 EMCENNISPNIVSYSILIDGLC 143
           EM     S ++ + ++L++ LC
Sbjct: 547 EMLARGFSADVSTTTLLVEMLC 568



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 90/183 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +++N       + N LD+A+  F ++  +   P+++ F  L+ +  K  +      + ++
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G   +V T + LI+ +        AF V  ++ +  + P+  +++ LI GLC  G 
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + +AL+ F   +     P+VVTY  LI G CK G    A++L  SM +    PD ++ ++
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 208 LAD 210
           + D
Sbjct: 213 IID 215



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 33/68 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A KLF ++   G  PD  TYNTI  G         A+QL +++       +  T T+
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 562

Query: 68  LIDAFCKE 75
           L++  C +
Sbjct: 563 LVEMLCDD 570


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  LF  +  +GL P+ +TY+ +I  +C   +LD A+    K+T V +K    
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LI   CK G++  A  +F +M+  G K NVV Y+ LI GY K   + +AF +Y EM
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISPN  +++ LI GLC    M EA   F   ++ +++P+ VTY +LI G+CK G  
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A +L D M+  G++PD
Sbjct: 547 VRAFELLDEMVEKGLVPD 564



 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++ +A  L  ++   G+ P +  YN +I   C   +LDEA  LF  +    L PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ILID+FCK G++D A     KM E G KA V  YS LI G+ K   +++A  +++
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N + PN+V Y+ LI G CK G +  A   +H      + P+  T+  LI G C A 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +L+  M+   ++P+ +  + L +
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIE 538



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 106/190 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD AL   G++T+ G++  +  Y+++I G+C L +L  A  LF+++    LKPN +
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVV 461

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI  +CKEG + +A  ++ +M  KG   N  T++ LI G   +  M  A  ++ EM
Sbjct: 462 IYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E N+ PN V+Y++LI+G CK G    A       ++  L+PD  TY  LI G C  GR 
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 184 TEAMQLYDSM 193
           +EA +  + +
Sbjct: 582 SEAREFMNDL 591



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 117/224 (52%), Gaps = 9/224 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L AA  LF ++   GL+P+++ Y ++I GYC    L  A +L+ ++T   + PN+ TFT 
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C   RM +A  +F +M+E     N VTY+ LI+G+ K  N   AF++ +EM E  
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDN--HLLPDVVTYAILIRGYCK 179
           + P+  +Y  LI GLC  G + EA      L      L+     LP+VVTY  LI G CK
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCK 620

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            G   +A  L   ML +  +P+    +   DY L S G+ E  I
Sbjct: 621 IGLMDKAELLCREMLASNSLPNQNTYACFLDY-LTSEGNIEKAI 663



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 9/206 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK---- 59
           KE +   A +L  ++ ++GL PD  TY  +I G CS  R+ EA +    L   Q K    
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEI 601

Query: 60  ----PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
               PN +T+T LI+  CK G MD A ++  +ML      N  TY+C +D      N++ 
Sbjct: 602 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 661

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  +++ + E  ++ N V+Y+ILI G CK G ++EA       +D+ + PD ++Y+ +I 
Sbjct: 662 AIQLHDVLLEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD 201
            YC+ G   EA++L++SML  G+ PD
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPD 746



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 97/207 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    +A  ++  ++ + G  P     + ++ G      +  A  L  K+    + P+
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LI++ CK+G++D+A  +F+ M  KG   N VTYS LID + K   +  A     
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I   +  YS LI G CK G +  A   F   + N L P+VV Y  LI GYCK G
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEG 474

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +LY  M   GI P+    + L
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTAL 501



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   L+ +GL  D+ TY T++ G C +   +   ++  ++      P+
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPS 319

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + L+D   K+G +  A  + +K+ + G   ++  Y+ LI+   K   +  A  ++ 
Sbjct: 320 EAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN 379

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN V+YSILID  CKRG ++ AL+      +  +   V  Y+ LI G+CK G
Sbjct: 380 NMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLG 439

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A  L+D M+ NG+ P+ ++ ++L
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSL 466



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 98/188 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++ G++   G +  + TYN  I G C   R+ EAV++   L+   L+ +  T+  L+ 
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    +    M ++M+E G   +    S L+DG  K  N+ SAFD+  ++ +  ++P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  Y+ LI+ +CK G ++EA   F+      L P+ VTY+ILI  +CK G+   A+   
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 191 DSMLRNGI 198
             M   GI
Sbjct: 414 GKMTEVGI 421



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 98/209 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+      AL LF ++   GL PD+  Y  ++   C L     A ++  ++       +
Sbjct: 190 LIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLS 249

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ + I   CK  R+ +A  + + +  KG +A+V TY  L+ G  K +  ++  ++  
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+  + S L+DGL K+G +  A    +      + P +  Y  LI   CK G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L+++M   G+ P+ +  S L D
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDVTYSILID 398



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 1/159 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E +++ A++L   L + G   + +TYN +I G+C L R+ EA ++   +    + P+
Sbjct: 653 LTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 711

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I+++ +I  +C+ G + +A  ++  ML +G   + V Y+ LI G   +  +  AF++ +
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 771

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           +M    + PN  +Y+ LI G C    +      F C L+
Sbjct: 772 DMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLN 810



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 34/191 (17%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--------------------------TC 55
           G  P+++TY  +I G C +  +D+A  L  ++                            
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 662

Query: 56  VQLK--------PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +QL          N++T+ ILI  FCK GR+ +A  +   M++ G   + ++YS +I  Y
Sbjct: 663 IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEY 722

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
            +  ++K A  ++E M    ++P+ V+Y+ LI G C  G + +A       +   + P+ 
Sbjct: 723 CRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNR 782

Query: 168 VTYAILIRGYC 178
            TY  LI G C
Sbjct: 783 ATYNSLIHGTC 793



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 66/140 (47%)

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ F +LI  + +  R  D  ++   M++ G    + T S +++G  + +  + A  +++
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  + + P++  Y+ ++  LC+      A         +     V TY + IRG CK  
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA+++ + +   G+  D
Sbjct: 265 RVWEAVEIKNLLSYKGLRAD 284


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 127/212 (59%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +D A+K+F  +  +G  PD+I+Y T+I GYC ++++D+A+ LFE++   +  P++ T
Sbjct: 314 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 373

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  L+   C  GR+ DA  +F +M+ +G   ++VTYS L+D   K+ +++ A  + + + 
Sbjct: 374 YNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIE 433

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            +N++P+I  Y+I+IDG+C+ G +E A   F       L P V TY I+I G CK G   
Sbjct: 434 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 493

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           EA +L+  M  N   PDG   +T+A   LQ++
Sbjct: 494 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 525



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF Q+  +G+ PDI TY +++   C+L        L  ++   ++ P+
Sbjct: 206 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 265

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+++G + +VVTY+ L+DG+     M  A  V++
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +P+++SY+ LI+G CK   +++A+Y F        +PD  TY  L+ G C  G
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVG 385

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A+ L+  M+  G MPD +  S L D
Sbjct: 386 RLQDAIALFHEMVARGQMPDLVTYSILLD 414



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 107/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ P++ T N +I  +C LNR+  A  +  K+  +  +P+  TFT
Sbjct: 71  HYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFT 130

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F KM+++G + NVVTY  LI+G  K  N  +A  +   M + 
Sbjct: 131 TLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG 190

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  P++V Y+ +ID LCK   + EA   F   +   + PD+ TY  L+   C        
Sbjct: 191 NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHV 250

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M+ + I+PD ++ ST+ D
Sbjct: 251 TTLLNQMVNSKILPDVVIFSTVVD 274



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 112/204 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++ D G +P+++TY T+I G C +     A++L   +     +P+ + 
Sbjct: 139 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 198

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T +ID+ CK+ ++ +A  +FS+M+ +G   ++ TY+ L+         K    +  +M 
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I P++V +S ++D LCK G + EA       +   + PDVVTY  L+ G+C      
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 318

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++D M+R G  PD +  +TL
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTL 342



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 109/196 (55%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C       L  Q+ +  + PD++ ++T++   C   ++ EA ++ + +    ++P+ +T+
Sbjct: 245 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 304

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T L+D  C +  MD+A  +F  M+ KG   +V++Y+ LI+GY K   +  A  ++EEMC 
Sbjct: 305 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 364

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P+  +Y+ L+ GLC  G +++A+  FH  +    +PD+VTY+IL+   CK     E
Sbjct: 365 KEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEE 424

Query: 186 AMQLYDSMLRNGIMPD 201
           AM L  ++  + + PD
Sbjct: 425 AMALLKAIEASNLNPD 440



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F +L      P I+ +  ++     +      + L  ++    + PN  T  I
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + +  T++ LI G      +  A  ++++M +  
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + TEA 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L+  M+  GI PD    ++L 
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLV 238



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 85/171 (49%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            N LD+A+  F +L  +   P+ + F  L+ +  K         + ++M   G   NV T
Sbjct: 34  FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 93

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
            + LI+ +     +  AF V  ++ +    P+  +++ LI GLC  G + EAL+ F   +
Sbjct: 94  LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D    P+VVTY  LI G CK G  + A++L  SM +    PD ++ +++ D
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K CHL+ A+ L   +    L PDI  YN II G C    L+ A  LF  L+   L P+
Sbjct: 416 LCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPS 475

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   CK G +++A  +F +M       +  TY+ +  G+ ++     A  + E
Sbjct: 476 VWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLE 535

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
           EM     S ++ + ++L++ L   GL + + +
Sbjct: 536 EMLARGFSADVSTTTLLVEMLSDDGLDQSSCF 567


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 118/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  L+ ++  +G+ P+++TYN ++ G+C +  L EA  L  ++    + P+  TF  
Sbjct: 219 LGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNT 278

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA  KEG+M  A ++ + M++   K +VVTY+ LIDGYF    +K+A  V+  M ++ 
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG 338

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN+ +Y+ +IDGLCK  +++EA+  F      +++PD+VTY  LI G CK      A+
Sbjct: 339 VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAI 398

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M   GI PD    + L D
Sbjct: 399 ALCKKMKEQGIQPDVYSYTILLD 421



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 114/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + AA  +   +    ++PD++TYN++I GY  LN++  A  +F  +    + PN  
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVR 344

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  CKE  +D+A  +F +M  K    ++VTY+ LIDG  K+ +++ A  + ++M
Sbjct: 345 TYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ SY+IL+D LCK G +E A   F   L      +V TY ++I G CKA   
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EAM L   M   G MPD +   T+
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTI 489



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 110/200 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  L  A  +   +T   ++PD++TY T++ GY  +N L  A  +F  +  + + PN  
Sbjct: 518 RKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQ 577

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +TI+ID  CK+  +D+A  +F +M  K    N+VTY+ LID   K+ +++ A  + +EM
Sbjct: 578 CYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEM 637

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+ I P++ SY+IL+DGLCK G +E A   F   L      +V  Y  +I   CKAG  
Sbjct: 638 KEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLF 697

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            EA+ L   M   G MPD +
Sbjct: 698 DEALDLQXKMEDKGCMPDAV 717



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL    Q+  +G + + ++Y T+I G C         +L  KL    +KP+ + +  
Sbjct: 149 IKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 208

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I + CK   + DA  ++S+M+ KG   NVVTY+ L+ G+    ++K AF +  EM   N
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +++ LID L K G M+ A       +   + PDVVTY  LI GY    +   A 
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            ++ SM ++G+ P+    +T+ D
Sbjct: 329 YVFYSMAQSGVTPNVRTYTTMID 351



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 24/242 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A + F +L  +G   ++ TYN +I G C  +   EA+ L  K+      P+
Sbjct: 423 LCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG-----------------------PKANVV 98
           +ITF  +I A  ++   D A  +  +M+ +G                        K +VV
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVV 542

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY  L+DGYF    +K A  V+  M +  ++PN+  Y+I+IDGLCK+  ++EA+  F   
Sbjct: 543 TYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEM 602

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
              ++ P++VTY  LI   CK      A+ L   M  +GI PD    + L D  L  SG 
Sbjct: 603 KHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD-GLCKSGR 661

Query: 219 QE 220
            E
Sbjct: 662 LE 663



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 23/223 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A+ LF ++  + + PDI+TY ++I G C  + L+ A+ L +K+    ++P+
Sbjct: 353 LCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 412

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TIL+DA CK GR+++A   F ++L KG   NV TY+ +I+G  K+     A D+  
Sbjct: 413 VYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKS 472

Query: 122 EMCENNISPNIVSYSILIDGLCK----------------RGLME-------EALYAFHCA 158
           +M      P+ +++  +I  L +                RGL E       EA       
Sbjct: 473 KMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVM 532

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
               + PDVVTY  L+ GY        A  ++ SM + G+ P+
Sbjct: 533 TKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPN 575



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A  +   +  RG  P+ IT NT+I G C    + +A+   +++     + N +++ 
Sbjct: 113 HITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYR 172

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G       +  K+     K +VV Y+ +I    K++ +  A D+Y EM   
Sbjct: 173 TLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVK 232

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+Y+ L+ G C  G ++EA    +     ++ PDV T+  LI    K G+   A
Sbjct: 233 GISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAA 292

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +   M++  I PD +  ++L D
Sbjct: 293 KIVLAVMMKACIKPDVVTYNSLID 316



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 99/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+   H    + LF +    G  PD+ T N ++  +C L  +  A  +   +      PN
Sbjct: 73  LVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPN 132

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   LI   C  G +  A     +++ +G + N V+Y  LI+G  K+   K+   +  
Sbjct: 133 AITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLR 192

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  +++ P++V Y+ +I  LCK  L+ +A   +   +   + P+VVTY  L+ G+C  G
Sbjct: 193 KLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMG 252

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  L + M    I PD    +TL D
Sbjct: 253 HLKEAFSLLNEMKLKNINPDVCTFNTLID 281



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 83/144 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+ LF ++  + + P+I+TY ++I   C  + L+ A+ L +++    ++P+
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TIL+D  CK GR++ A  +F ++L KG   NV  Y+ +I+   K+     A D+  
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQX 705

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M +    P+ V++ I+I  L ++
Sbjct: 706 KMEDKGCMPDAVTFDIIIWALFEK 729



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 2/178 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    +N I+    +       + LF+K       P+  T  IL++ FC    +  A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + +L++G   N +T + LI G      +K A   ++++       N VSY  LI+GLCK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 145 RGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G   +A+      L+ H + PDVV Y  +I   CK     +A  LY  M+  GI P+
Sbjct: 181 TG-ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPN 237



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ L  ++ + G++PD+ +Y  ++ G C   RL+ A ++F++L       N
Sbjct: 621 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLN 680

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T +I+  CK G  D+A  +  KM +KG   + VT+  +I   F+      A  +  
Sbjct: 681 VQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILX 740

Query: 122 EM 123
           EM
Sbjct: 741 EM 742



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 74/163 (45%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           AV  F+++  ++  P +  F  ++ +            +F K    G   ++ T + L++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
            +    ++  AF V   + +    PN ++ + LI GLC RG +++ALY     +      
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + V+Y  LI G CK G      +L   +  + + PD ++ +T+
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 209


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A K+F ++   GL PD ++YNT++ GYC +    EA+ +F ++T   + P+ +
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI   CK G ++ A  +  +M E+G + N +T++ LIDG+ K   +  A     EM
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P++V Y+ LI+G C  G M+EA           + PDVVTY+ ++  YCK G  
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A QL   ML NG++PD +  S+L
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSL 443



 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 130/220 (59%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K  +L+ A+ L  ++ +RGL+ + IT+  +I G+C    LD+A+    ++   +++P
Sbjct: 306 VMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP 365

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  LI+ +C  GRMD+A  +  +M  KG K +VVTYS ++  Y K+ +  SAF + 
Sbjct: 366 SVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLN 425

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M EN + P+ ++YS LI  LC+   + +A   F   +   L PD VTY  LI G+CK 
Sbjct: 426 QQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKE 485

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           G    A+ L+D M++ G++PD +  S L +   +S+ ++E
Sbjct: 486 GNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 117/202 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +L   + + GL+P+++T+N+++ G C   R+++A ++F+++    L P+ +++ 
Sbjct: 207 EVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYN 266

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  +CK G   +A  +F++M  KG   +VVT++ LI    K+ N++ A  +  EM E 
Sbjct: 267 TLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER 326

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N ++++ LIDG CK+G +++AL A        + P VV Y  LI GYC  GR  EA
Sbjct: 327 GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEA 386

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L   M   G+ PD +  ST+
Sbjct: 387 RELVREMEAKGVKPDVVTYSTI 408



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 110/210 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + + +  L +A + F  +   G+ P++ TYN ++   C      EA+ +   +      P
Sbjct: 131 LALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDP 190

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++T+  L+ AFC+ G +D A  +   M E G K N+VT++ +++G  K+  M+ A  V+
Sbjct: 191 NAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVF 250

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  ++P+ VSY+ L+ G CK G   EAL  F       ++PDVVT+  LI   CKA
Sbjct: 251 DEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKA 310

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G    A+ L   M   G+  + +  + L D
Sbjct: 311 GNLERAVGLVREMRERGLQMNEITFTALID 340



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 106/186 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL    ++    ++P ++ YN +I GYC + R+DEA +L  ++    +KP+ +
Sbjct: 344 KKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVV 403

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ ++ A+CK G    A  +  +MLE G   + +TYS LI    + + +  A  +++ M
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V+Y+ LIDG CK G +E AL      +   +LPDVVTY++LI G  K+ R 
Sbjct: 464 ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART 523

Query: 184 TEAMQL 189
            EA +L
Sbjct: 524 KEAQRL 529



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 15/207 (7%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A +L  Q+ + G+ PD ITY+++I   C   RL +A  LF+ +  + L+P+ +T+T LI
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA----FDVY-EEMC 124
           D  CKEG ++ A  +  +M++ G   +VVTYS LI+G  KS   K A    F +Y EE  
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPV 539

Query: 125 ENNI----------SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
             NI          +  + S   L+ G C +GLM EA   +   LD +   D   Y++LI
Sbjct: 540 PANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLI 599

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G+C+ G   +A+  +  ML+ G  P+
Sbjct: 600 HGHCREGNVMKALSFHKQMLQCGFAPN 626



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 15/212 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++ AL L  ++   G+ PD++TY+ +I G     R  EA +L  KL   +  P +I
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 64  TFTIL---------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            +  L               +  FC +G M++A  ++  +L++    +   YS LI G+ 
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +  N+  A   +++M +   +PN  S   LI GL ++G++ EA       L+   L D  
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAE 663

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
               LI    K G     + +   M R+G++P
Sbjct: 664 ASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 56/124 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K++  + DR    D   Y+ +I G+C    + +A+   +++      PNS +   
Sbjct: 573 MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTIS 632

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    ++G + +A  +  ++L     A+      LID   K  N+ +  DV   M  + 
Sbjct: 633 LIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDG 692

Query: 128 ISPN 131
           + P+
Sbjct: 693 LLPS 696


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 117/215 (54%), Gaps = 1/215 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD ++ LF ++   G EPD+ITYN +I  +C    +  A + F ++    LKPN I+++ 
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CKEG M  A   F  M   G   N  TYS LID   K+ N+  AF + +EM + +
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NIV+Y+ L+DGLC+ G+M EA   F       + P++  Y  LI G+ K     +AM
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +L++ M    I PD LL  T+  + L S    E C
Sbjct: 363 ELFNEMREKDIKPDILLWGTIV-WGLCSESKLEEC 396



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 125/219 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A +LF  +   G+ P++  Y  +I G+  +  +D+A++LF ++    +KP+
Sbjct: 317 LCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  ++   C E ++++  ++ ++M E G  AN V Y+ L+D YFK+ N   A ++ E
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +      +V++  LIDGLCKRGL++EA+Y F    D+ L P+V  Y  LI G CK  
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNN 496

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              +A +L+D M    ++PD +  + + D NL+    QE
Sbjct: 497 CIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 113/202 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D +   F  +   G+ P + TYN +I   C    +  A  LFE++  + L P+ +T+  L
Sbjct: 114 DLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTL 173

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID + K G +D++  +F +M   G + +V+TY+ LI+ + K + M  AF+ + EM + ++
Sbjct: 174 IDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDL 233

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN++SYS LID LCK G+M+ A+  F       LLP+  TY+ LI   CKAG   EA  
Sbjct: 234 KPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFM 293

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L D ML+  +  + +  +TL D
Sbjct: 294 LADEMLQEHVDLNIVTYTTLLD 315



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 116/210 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A + F ++ D+ L+P++I+Y+T+I   C    +  A++ F  +T V L PN  T++ LID
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G + +A M+  +ML++    N+VTY+ L+DG  +   M  A +++  M +  ++P
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+ LI G  K   M++A+  F+   +  + PD++ +  ++ G C   +  E   + 
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M  +GI  + ++ +TL D   ++    E
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTE 430



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 111/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   +D A++LF ++ ++ ++PDI+ + TI+ G CS ++L+E   +  ++    +  N 
Sbjct: 353 IKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANP 412

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T L+DA+ K G   +A  +  +M + G +  VVT+  LIDG  K   ++ A   +  
Sbjct: 413 VIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGR 472

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M ++++ PN+  Y+ LIDGLCK   + +A   F    D +++PD + Y  +I G  K G 
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGN 532

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA+ + + M+  GI  D
Sbjct: 533 FQEALNMRNKMMEMGIELD 551



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 103/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A+K F  +T  GL P+  TY+++I   C    L EA  L +++    +  N
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+D  C+EG M++A  +F  M + G   N+  Y+ LI G+ K ++M  A +++ 
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E +I P+I+ +  ++ GLC    +EE         ++ +  + V Y  L+  Y KAG
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426

Query: 182 RPTEAMQLYDSM 193
             TEA+ L + M
Sbjct: 427 NRTEAINLLEEM 438



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 108/220 (49%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++   L+AA + F ++T   + P   + N  +         D +   F  +    + P
Sbjct: 71  VLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAP 130

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              T+ I+I   CKEG M  A  +F +M + G   ++VTY+ LIDGY K   +  +  ++
Sbjct: 131 TVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLF 190

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM      P++++Y+ LI+  CK   M  A   F    D  L P+V++Y+ LI   CK 
Sbjct: 191 EEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKE 250

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           G    A++ +  M R G++P+    S+L D N ++    E
Sbjct: 251 GMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGE 290



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 98/189 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ D G E  ++T+  +I G C    + EA+  F ++    L+PN   +T LID
Sbjct: 431 AINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALID 490

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   + DA  +F +M +K    + + Y+ +IDG  K  N + A ++  +M E  I  
Sbjct: 491 GLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIEL 550

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ L+ GL + G +++A       +   ++PD      L+R + + G   EA++L 
Sbjct: 551 DLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQ 610

Query: 191 DSMLRNGIM 199
           + ++  G++
Sbjct: 611 NELVEKGLI 619



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +      L  L+ A Q F ++T  ++ P + +    +    K G  D +   
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+  G    V TY+ +I    K  +M +A  ++E+M +  ++P+IV+Y+ LIDG  K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL++E++  F         PDV+TY  LI  +CK      A + +  M    + P+ + 
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 205 LSTLAD 210
            STL D
Sbjct: 240 YSTLID 245



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 77/151 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+  FG++ D  L+P++  Y  +I G C  N + +A +LF+++    + P+
Sbjct: 457 LCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPD 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T +ID   K G   +A  M +KM+E G + ++  Y+ L+ G  +   ++ A     
Sbjct: 517 KIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLA 576

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM    I P+    + L+    + G ++EA+
Sbjct: 577 EMIGKGIIPDETLCTRLLRKHYELGNIDEAI 607


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 121/210 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  AL LF ++  +G+ PDI TYN++I   C+L        L  ++   ++ PN
Sbjct: 171 LCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPN 230

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++  I++DA CKEG++ +A  +   M++ G + +VVTY+ L+DG+     M  A  V++
Sbjct: 231 VVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD 290

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N    N+VSY+ LI+G CK   +++A+Y F       L+P+ +TY+ LI G C  G
Sbjct: 291 MMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVG 350

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L++ M+  G +P+ +  S L DY
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDY 380



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 126/213 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +   G   ++++YNT+I GYC + R+D+A+ LFE++   +L PN++T++ 
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F++M+  G   N+VTYS L+D   K+  +  A  + + +  +N
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++  Y+I IDG+C+ G +E A   F       L PDV T+ I+IRG CK G   EA 
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +L+  M  NG + +G   +T+    LQ++ +  
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSR 494



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 112/195 (57%), Gaps = 3/195 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL   D AL +  ++   G +PD  T+ T++ G C + ++ EA+ +F+K+     +PN 
Sbjct: 102 CHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNV 161

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  L++  CK+ ++ +A  +FS+M+ KG   ++ TY+ LI         K    +  E
Sbjct: 162 VTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 221

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M ++ I PN+VS +I++D LCK G + EA       +   + PDVVTYA L+ G+C    
Sbjct: 222 MVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSE 281

Query: 183 PTEAMQLYDSMLRNG 197
             EA++++D M+RNG
Sbjct: 282 MDEAVKVFDMMVRNG 296



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 113/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  ++   G+ PD+ T   +I  +C LNR+D A+ +  K+  +  +P++ TFT
Sbjct: 71  HYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFT 130

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   C  G++ +A  +F KM+ +G + NVVTY  L++G  K + +  A +++ EM   
Sbjct: 131 TLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK 190

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP+I +Y+ LI  LC     +      +  + + ++P+VV+  I++   CK G+ TEA
Sbjct: 191 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA 250

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             + D M++ G+ PD +  + L D
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMD 274



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 111/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F ++   G +P+++TY T++ G C   +L EA+ LF ++    + P+  T+  LI 
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C        T + ++M++     NVV+ + ++D   K   +  A DV + M +  + P
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEP 264

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ L+DG C R  M+EA+  F   + N  + +VV+Y  LI GYCK  R  +AM L+
Sbjct: 265 DVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLF 324

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M R  ++P+ +  STL
Sbjct: 325 EEMCRQELIPNTMTYSTL 342



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 100/203 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P I  +  ++     +      + L +K+    + P+  T TI
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++FC   R+D A  + +K+L+ G + +  T++ L+ G      +  A DV+++M    
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  L++GLCK   + EAL  F   +   + PD+ TY  LI   C         
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M+++ IMP+ + L+ + D
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVD 239



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ L   +    L+PD+  YN  I G C    L+ A  LF  L    L+P+
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T  I+I   CK G +D+A+ +F +M E G   N  TY+ +  G  ++     A  + E
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLE 500

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L+  L   GL
Sbjct: 501 EMLARGFSADVSTTALLVKMLSDDGL 526



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 3/193 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A+ LF ++   G  P+++TY+ ++   C  +RL EA+ L + +    L P+ 
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             + I ID  C+ G ++ A  +FS +  +G + +V T++ +I G  K   +  A  ++ E
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M EN    N  +Y+ +  GL +      A+      L      DV T A+L++     G 
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL 526

Query: 183 PTEAMQLYDSMLR 195
                Q+    +R
Sbjct: 527 DQSVKQILCEFMR 539


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 111/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+    LF ++ D G  PDIITYN +I  YC   ++  A + F ++    LKPN +T++ 
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAFCKEG M  A  +F  M   G   N  TY+ LID   K+ N+  A+ +  +M +  
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NIV+Y+ L+DGLCK G M EA   F   L + + P+   Y  L+ GY KA R  +AM
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++   M    I PD +L  ++
Sbjct: 520 KILKQMTECNIKPDLILYGSI 540



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 121/208 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ + +LF Q+ + GL PD++TYN++I GY  +  L+E   LF ++  V   P+
Sbjct: 299 LCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPD 358

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+ +CK  +M  A   FS+M   G K NVVTYS LID + K   M+ A  ++ 
Sbjct: 359 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFV 418

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN  +Y+ LID  CK G + EA    +  L   +  ++VTY  L+ G CKAG
Sbjct: 419 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 478

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           R  EA +++ SML++GI P+  + + L 
Sbjct: 479 RMIEAEEVFRSMLKDGISPNQQVYTALV 506



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 112/198 (56%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K F  +   G+ P + TYN +I   C    L+ + +LF ++  + L P+ +T+  LID +
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G +++   +F++M + G   +++TY+ LI+ Y K + M  AF+ + EM  N + PN+
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+YS LID  CK G+M+ A+  F       LLP+  TY  LI   CKAG  TEA +L + 
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 193 MLRNGIMPDGLLLSTLAD 210
           ML+ G+  + +  + L D
Sbjct: 455 MLQAGVKLNIVTYTALLD 472



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 117/210 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A + F ++ + GL+P+++TY+T+I  +C    +  A++LF  +    L PN  T+T LID
Sbjct: 378 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G + +A  + + ML+ G K N+VTY+ L+DG  K+  M  A +V+  M ++ ISP
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N   Y+ L+ G  K   ME+A+       + ++ PD++ Y  +I G+C   +  E   + 
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL 557

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + M   GI  + ++ +T+ D   ++  S +
Sbjct: 558 EEMKSRGISANPVISTTIIDAYFKAGKSSD 587



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 117/222 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++F  +   G+ P+   Y  ++ GY    R+++A+++ +++T   +KP+
Sbjct: 474 LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +  +I   C + ++++  ++  +M  +G  AN V  + +ID YFK+     A + ++
Sbjct: 534 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +   IV+Y +LIDGLCK G++E A+  F   L   L P+V  Y  LI G CK  
Sbjct: 594 EMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNN 653

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
               A +L+D M   G+ PD    + L D NL+    QE  +
Sbjct: 654 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 695



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 103/191 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   ++ A+K+  Q+T+  ++PD+I Y +II G+CS  +L+E   + E++    +  N 
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +  T +IDA+ K G+  DA   F +M + G +A +VTY  LIDG  K+  ++ A D +  
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR 629

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN+  Y+ LIDGLCK   +E A   F       + PD+  +  LI G  K G 
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689

Query: 183 PTEAMQLYDSM 193
             EA+ L   M
Sbjct: 690 LQEALVLISRM 700



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KLF  +   GL P+  TY ++I   C    L EA +L   +    +K N +
Sbjct: 406 KEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 465

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D  CK GRM +A  +F  ML+ G   N   Y+ L+ GY K++ M+ A  + ++M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEE--------------------------------- 150
            E NI P+++ Y  +I G C +  +EE                                 
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585

Query: 151 --ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             AL  F    D  +   +VTY +LI G CKAG    A+  +  ML  G+ P+  + ++L
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645

Query: 209 AD 210
            D
Sbjct: 646 ID 647



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 97/173 (56%)

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           + F  +    + P+  T+ ++ID  CKEG ++++  +F +M E G   +VVTY+ LIDGY
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
            K  +++    ++ EM +    P+I++Y+ LI+  CK   M  A   F    +N L P+V
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           VTY+ LI  +CK G    A++L+  M R G++P+    ++L D N ++    E
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTE 447



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 102/191 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F ++ D G+E  I+TY  +I G C    ++ AV  F ++  + L+PN   +T LID
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   ++ A  +F +M  +G   ++  ++ LIDG  K  N++ A  +   M E  I  
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  Y+ L+ G  + G + +A   F+  ++  +LP+ V    L+R Y K G+  EA++L 
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 767

Query: 191 DSMLRNGIMPD 201
           + M R G++ +
Sbjct: 768 NEMERMGLITE 778



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 93/182 (51%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            ++ +   +  L  L+EA + F ++   +  P + +   L+    K G        F+ M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           +  G   +V TY+ +ID   K  +++++  ++ +M E  +SP++V+Y+ LIDG  K G +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EE    F+   D   +PD++TY  LI  YCK  +   A + +  M  NG+ P+ +  STL
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 209 AD 210
            D
Sbjct: 401 ID 402



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 80/151 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+  F ++   GL+P++  Y ++I G C  N ++ A +LF+++ C  + P+
Sbjct: 614 LCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPD 673

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT LID   K G + +A ++ S+M E   + ++  Y+ L+ G+ +   +  A   + 
Sbjct: 674 ITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFN 733

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM E  I P  V    L+    KRG ++EA+
Sbjct: 734 EMIEKGILPEEVLCICLLREYYKRGQLDEAI 764



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++A KLF ++  RG+ PDI  +  +I G      L EA+ L  ++T + ++ +   +T 
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           L+  F + G +  A   F++M+EKG     V   CL+  Y+K   +  A ++  EM
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770



 Score = 40.4 bits (93), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 46/90 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K  +L  AL L  ++T+  +E D+  Y +++ G+     L +A + F ++    + P  
Sbjct: 685 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 744

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +    L+  + K G++D+A  + ++M   G
Sbjct: 745 VLCICLLREYYKRGQLDEAIELKNEMERMG 774


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 120/198 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ ++  AL LFG +T R ++PDI+ YNT+I G+C +  +++A +L++ +   ++ PN I
Sbjct: 375 QDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 434

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+A+C  G + +A  ++  M+EKG K  +VT + +I GY +S +   A +    M
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P+ +SY+ LI+G  +   M++A    +      LLPD++TY +++ G+C+ GR 
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRM 554

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  +   M+  GI PD
Sbjct: 555 QEAELVLRKMIEKGINPD 572



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 109/194 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HLD AL  F  +   GL PD + Y  ++ GYC    + EA+++ +++       + I + 
Sbjct: 273 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++  CKE  + DA  +F +M+E+G   +  T++ LI G+ +  NM  A  ++  M + 
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P+IV+Y+ LIDG CK G ME+A   +   +   + P+ +TY ILI  YC  G  +EA
Sbjct: 393 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 452

Query: 187 MQLYDSMLRNGIMP 200
            +L+D M+  GI P
Sbjct: 453 FRLWDVMIEKGIKP 466



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 113/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALK+  ++ ++G   D+I YNTI+ G C    L +A +LF+++      P+  TFT LI 
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 371

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++G M  A  +F  M ++  K ++V Y+ LIDG+ K   M+ A ++++ M    I P
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 431

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y ILI+  C  G + EA   +   ++  + P +VT   +I+GYC++G  ++A +  
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 491

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+  G+ PD +  +TL +
Sbjct: 492 GRMIAKGVAPDHISYNTLIN 511



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 118/204 (57%), Gaps = 3/204 (1%)

Query: 1   MLIKECHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +L++ C  D    A ++FG++  +G+ PD+++++++I  +     LD+A+  F  +    
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+++ +T+L+  +C+ G M +A  +  +MLE+G   +V+ Y+ +++G  K + +  A 
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +++EM E    P+  +++ LI G C+ G M +AL  F      ++ PD+V Y  LI G+
Sbjct: 349 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 408

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK G   +A +L+D M+   I P+
Sbjct: 409 CKVGEMEKASELWDGMISRKIFPN 432



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 108/194 (55%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + GL PD  TYNT++   C  +   EA ++F ++    + P+ ++F+ LI  F +  
Sbjct: 213 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR 272

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A + F  M + G   + V Y+ L+ GY ++ NM  A  + +EM E     ++++Y+
Sbjct: 273 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            +++GLCK  ++ +A   F   ++   LPD  T+  LI G+C+ G  T+A+ L+ +M + 
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392

Query: 197 GIMPDGLLLSTLAD 210
            I PD +  +TL D
Sbjct: 393 NIKPDIVAYNTLID 406



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L+ A ++   + D+GL+P + TYN II G C   R   A  +  ++  + L P++ 
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C+     +A  +F +ML +G   ++V++S LI  + +++++  A   + +M
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM 284

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y++L+ G C+ G M EAL      L+   + DV+ Y  ++ G CK    
Sbjct: 285 KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 344

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T+A +L+D M+  G +PD    +TL
Sbjct: 345 TDADKLFDEMVERGALPDFYTFTTL 369



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D       ++   G+  D++TYNT+I  YC    L+EA ++   +    LKP+
Sbjct: 128 LCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPS 187

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK+GR   A  +  +ML  G   +  TY+ L+    +  N   A +++ 
Sbjct: 188 LFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFG 247

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++VS+S LI    +   +++AL  F       L+PD V Y +L+ GYC+ G
Sbjct: 248 EMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNG 307

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA+++ D ML  G + D +  +T+
Sbjct: 308 NMLEALKIRDEMLEQGCVLDVIAYNTI 334



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 108/206 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   L    + F  L  +G    I   N+++ G   ++ ++ A ++  ++    ++ N 
Sbjct: 59  VQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNV 118

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+++A CK+G+ DD     S+M   G  A++VTY+ LI  Y +   ++ AF++   
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  + P++ +Y+ +I+GLCK+G    A       L+  L PD  TY  L+   C+   
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +EA +++  MLR G++PD +  S+L
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSL 264



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 75/123 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +  G++  +G+ PD I+YNT+I G+   + +D+A     K+    L P+ IT+ ++++
Sbjct: 487 ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMN 546

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC++GRM +A ++  KM+EKG   +  TY+ LI+G+    N+  AF  ++EM +   +P
Sbjct: 547 GFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606

Query: 131 NIV 133
           + V
Sbjct: 607 DDV 609



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 88/162 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A +L+  + ++G++P ++T NT+I GYC      +A +   ++    + P+ I++ 
Sbjct: 448 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 507

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+ F +E  MD A +  +KM ++G   +++TY+ +++G+ +   M+ A  V  +M E 
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            I+P+  +Y+ LI+G   +  + EA       L     PD V
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E ++D A     ++   GL PDIITYN ++ G+C   R+ EA  +  K+    + P+
Sbjct: 513 FVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPD 572

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T LI+    +  +++A     +ML++G
Sbjct: 573 RSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 116/199 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H++ A  L+ ++  +G+ P+++TY+ +I G+ ++ +L +AV LF K+    +KP+  
Sbjct: 239 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVY 298

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+D FCK G++  A  +  +M ++G   N+VTYS ++D   K+  +  A  +  ++
Sbjct: 299 TFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKL 358

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I PN+ +Y+ILIDGLC  G +E+A   F   L       VVTY ++  G+CK G  
Sbjct: 359 KDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLF 418

Query: 184 TEAMQLYDSMLRNGIMPDG 202
            EA  L   M  NG +PD 
Sbjct: 419 DEASALLSKMEENGCIPDA 437



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 114/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++   G  P+ IT+ T+I G C   ++ +A+   +KL  +  + N I++  LID
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  +  ++  K  + NVV YS +IDG  K +++  AFD+Y EM    ISP
Sbjct: 201 GLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 260

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS LI G    G +++A+  F+  +  ++ PDV T+ IL+  +CK+G+ + A++L 
Sbjct: 261 NVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLV 320

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G  P+ +  S++ D
Sbjct: 321 DEMHDRGQPPNIVTYSSILD 340



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 1/214 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L   G + + I+Y T+I G C +     A+ L  ++    ++PN + ++
Sbjct: 172 QIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYS 231

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID  CK+  ++DA  ++S+M+ KG   NVVTYS LI G+F    +K A D++ +M   
Sbjct: 232 TIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISE 291

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P++ +++IL+D  CK G +  AL       D    P++VTY+ ++   CK  R  +A
Sbjct: 292 NIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKA 351

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + L   +   GI P+    + L D  L +SG  E
Sbjct: 352 VALLTKLKDQGIRPNMHTYTILID-GLCTSGKLE 384



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    L L  ++  RG++P+++  N +I  +C L  +  A  +F K+  +   PN
Sbjct: 97  LVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPN 156

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITFT LI   C +G++  A     K++  G + N ++Y  LIDG  K    ++A D+  
Sbjct: 157 TITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLR 216

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    + PN+V YS +IDG+CK   + +A   +   +   + P+VVTY+ LI G+   G
Sbjct: 217 RVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 276

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L++ M+   I PD    + L D
Sbjct: 277 KLKDAVDLFNKMISENIKPDVYTFNILVD 305



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 110/188 (58%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL L  ++  + ++P+++ Y+TII G C    +++A  L+ ++    + PN +T++ LI
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F   G++ DA  +F+KM+ +  K +V T++ L+D + KS  +  A  + +EM +    
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PNIV+YS ++D LCK   +++A+       D  + P++ TY ILI G C +G+  +A  +
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389

Query: 190 YDSMLRNG 197
           ++ +L  G
Sbjct: 390 FEDLLVKG 397



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 96/201 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF  L  +   P  I +N I+            + L +K+    +KPN +   I
Sbjct: 68  VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC+ G +  A  +F+K+L+ G   N +T++ LI G      +  A + ++++    
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N +SY  LIDGLCK G    AL          + P+VV Y+ +I G CK     +A 
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            LY  M+  GI P+ +  S L
Sbjct: 248 DLYSEMVSKGISPNVVTYSAL 268



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  ALKL  ++ DRG  P+I+TY++I+   C  +R+D+AV L  KL    ++PN  
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILID  C  G+++DA  +F  +L KG    VVTY  +  G+ K      A  +  +M
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKM 428

Query: 124 CENNISPNIVSYSILIDGLCKRG 146
            EN   P+  +Y ++   L K+G
Sbjct: 429 EENGCIPDAKTYELIKLSLFKKG 451



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 6/188 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           ++I Y++    + S N +D+AV LF  L      P +I F  ++ +  K         + 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            KM  +G K N+V  + LI+ + +   +  AF V+ ++ +   +PN ++++ LI GLC +
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 146 GLMEEALYAFH---CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           G + +AL  FH    AL      + ++Y  LI G CK G    A+ L   +    + P+ 
Sbjct: 171 GQIHQAL-NFHDKLVALGFQF--NQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNV 227

Query: 203 LLLSTLAD 210
           ++ ST+ D
Sbjct: 228 VMYSTIID 235



 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 78/161 (48%)

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           F  + C   K N I ++     F     +DDA  +F+ +L + P    + ++ ++    K
Sbjct: 40  FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVK 99

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           S++  +   + ++M    I PN+V+ +ILI+  C+ GL+  A   F   L     P+ +T
Sbjct: 100 SKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT 159

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  LI+G C  G+  +A+  +D ++  G   + +   TL D
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 115/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++   +   G+E DI TYNT+ CG C +NR+++A +L   +    + PN +++T 
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    KEG M +A  +F  M  KG + +VVTY+ +IDGY K+ +++ A    +EM +  
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I +Y+ L+ G C  G ++ AL  F         P+VV Y  L+ G  K GR  EA 
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           QLYD ML  G+ PD  L S L
Sbjct: 519 QLYDDMLAAGLTPDDTLYSVL 539



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 96/191 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F +    G+EP+  TY  +I G+C + +++ A  L   +    +  N I F  +ID
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ G ++ A  + + M + G + ++ TY+ L  G  +   M+ A  +   M E  ++P
Sbjct: 332 GYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAP 391

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N VSY+ LI    K G M EA   F         P VVTY ++I GY K G   EA +  
Sbjct: 392 NYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFK 451

Query: 191 DSMLRNGIMPD 201
             M + G++PD
Sbjct: 452 KEMEKKGLVPD 462



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 106/207 (51%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++  + +  D+  Y+ +I  YC    +  A ++F++     ++PN  T+  LI+ FC
Sbjct: 240 VYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFC 299

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G+++ A M+ + M  +G   N + ++ +IDGY +   ++ A ++   M +  I  +I 
Sbjct: 300 KIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIY 359

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ L  GLC+   ME+A    H   +  + P+ V+Y  LI  + K G   EA +L+  M
Sbjct: 360 TYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDM 419

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQE 220
              G  P  +  + + D  +++   +E
Sbjct: 420 EGKGSRPSVVTYNVMIDGYIKNGSIRE 446



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 74/139 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A +LF  +  +G  P ++TYN +I GY     + EA +  +++    L P+  
Sbjct: 405 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIY 464

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G++D A  +F +M  +G K NVV Y+ L+ G  K    + AF +Y++M
Sbjct: 465 TYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDM 524

Query: 124 CENNISPNIVSYSILIDGL 142
               ++P+   YS+L+  L
Sbjct: 525 LAAGLTPDDTLYSVLVGSL 543



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 98/206 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  +L   G+  +   YN+++  Y      D    L +++    ++P   
Sbjct: 160 KSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVG 219

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TIL+D   + G +     ++ +M  K    +V  YS +I+ Y +  N++ A +V++E 
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDEC 279

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PN  +Y  LI+G CK G +E A           +  + + +  +I GYC+ G  
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMV 339

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            +A+++   M + GI  D    +TLA
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLA 365



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 97/184 (52%), Gaps = 2/184 (1%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++ + ++ G+C    +D+A  L ++L    +  N+  +  L+D++ ++ R DDA     K
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQ-RNDDAVAGLLK 207

Query: 88  MLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            +E +G +  V TY+ L+DG  ++ ++     VY+EM   N++ ++  YS +I+  C+ G
Sbjct: 208 EMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGG 267

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +  A   F   + + + P+  TY  LI G+CK G+   A  L   M   G+  + ++ +
Sbjct: 268 NVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFN 327

Query: 207 TLAD 210
           T+ D
Sbjct: 328 TMID 331



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   +  A +   ++  +GL PDI TY  ++ G+C   ++D A++LFE++     KPN 
Sbjct: 439 IKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNV 498

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           + +T L+    KEGR ++A  ++  ML  G   +   YS L+
Sbjct: 499 VAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 41/72 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+LF ++  RG +P+++ Y  ++ G     R +EA QL++ +    L P+   +++
Sbjct: 479 VDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSV 538

Query: 68  LIDAFCKEGRMD 79
           L+ +   + R D
Sbjct: 539 LVGSLHTDSRKD 550


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 119/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A +L  ++ ++G +P   TY  +I   C +   D+A+++ +++      PN  T+T
Sbjct: 214 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 273

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILID  C+EG++++A  +F KML+ G    ++T++ LI+GY K   + SAF +   M + 
Sbjct: 274 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 333

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PNI +Y+ L++GLC+     +A       +DN LLPD VTY IL+ G+CK G+   A
Sbjct: 334 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 393

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +++SM   G+ PDG   + L D
Sbjct: 394 FNIFNSMNSAGLEPDGFTFTALID 417



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  +F  +   GLEPD  T+  +I G C L RL++A  +   +    +  + +
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445

Query: 64  TFTILIDAFCKEGR-----------------------------------MDDATMMFSKM 88
           TFT LID  CK G+                                   +++A  M  KM
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           ++ G   +VVT++ LI+G+ ++     +  + E M +   SPN+ +Y+I+I+GLC  G +
Sbjct: 506 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 565

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EEA           + P+  TYA+L++ + KAGR   A Q+  +M++NG  P+  + S L
Sbjct: 566 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 625



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 105/195 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A  +F ++   GL P IIT+N +I GYC    +  A QL   +     KPN
Sbjct: 279 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L++  C+  +   A ++  ++++ G   + VTY+ L+DG+ K   +  AF+++ 
Sbjct: 339 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+  +++ LIDGLCK G +E+A       +   +  D VT+  LI G+CK G
Sbjct: 399 SMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 458

Query: 182 RPTEAMQLYDSMLRN 196
           +  +   L+++M+ N
Sbjct: 459 KAKDVCFLFENMVEN 473



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 35/233 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + +A +L   +     +P+I TYN ++ G C +++  +A  L  ++    L P+ +
Sbjct: 316 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 375

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D FCKEG+++ A  +F+ M   G + +  T++ LIDG  K   ++ A  +   M
Sbjct: 376 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 435

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH--------------------- 162
            +  IS + V+++ LIDG CK G  ++  + F   ++N                      
Sbjct: 436 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 495

Query: 163 --------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                         L+P VVT+ ILI G+C+AG    ++++ + M + G  P+
Sbjct: 496 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 36/246 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  + G++   GL P ++T+  +I G+C       ++++ E++      PN
Sbjct: 489 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 548

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C  GR+++A  +   M   G   N  TY+ L+  + K+  +  AF +  
Sbjct: 549 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 608

Query: 122 EMCENNISPNIVSYSILIDG------------------LCKRGLMEE-------ALYAFH 156
            M +N   PN   YS L+ G                  L  R L  E       + + F 
Sbjct: 609 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFR 668

Query: 157 CALDNHLL-----------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
               +H L           P    Y  L+ G CK GR  EA QL   M+++G+ PD  + 
Sbjct: 669 LMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAIS 728

Query: 206 STLADY 211
           S +  Y
Sbjct: 729 SIIEHY 734



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 6/216 (2%)

Query: 1   MLIKECH--LDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           +LI+EC    +  +KL G L   T+ G       Y+T++     LN    A  ++ ++  
Sbjct: 62  LLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVN 121

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
                  I +  +++A CK G +  A M   K+L  G   +    + L+    +  ++  
Sbjct: 122 EGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGE 181

Query: 116 AFDVYEEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
           AF V+E+M  E +  PN V+YSILI GLC+ G +EEA       ++    P   TY +LI
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  C  G   +AM++ D M     +P+    + L D
Sbjct: 242 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 277



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 72/257 (28%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +LK+  ++   G  P++ TY  II G C+  R++EA  +   ++   + PN  T+ +L+ 
Sbjct: 533 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 592

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY----------------------- 107
           A  K GR+D A  + S M++ G + N   YS L+ G+                       
Sbjct: 593 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSL 652

Query: 108 --------------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA-- 151
                         F+  ++  A  + +E+ +  + P    Y+ L+ GLCK G + EA  
Sbjct: 653 SSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQ 711

Query: 152 ------------------LYAFHC--------------ALDNHLLPDVVTYAILIRGYCK 179
                             +   +C               LDN  +P   +Y  +I G   
Sbjct: 712 LTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRN 771

Query: 180 AGRPTEAMQLYDSMLRN 196
            GR  EA +L   ++R+
Sbjct: 772 EGRVQEAQKLVSDLVRH 788



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 35/211 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR------------------- 42
           L K   L+ A  + G +  +G+  D +T+  +I G+C + +                   
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478

Query: 43  ----------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                           L+EA  +  K+    L P+ +T TILI+  C+ G    +  M  
Sbjct: 479 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 538

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M + G   NV TY+ +I+G   +  ++ A  +   M    +SPN  +Y++L+    K G
Sbjct: 539 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 598

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ A       + N   P+   Y+ L+ G+
Sbjct: 599 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 4/196 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +   ++  G+ P+  TY  ++  +    RLD A Q+   +     +PNS  ++
Sbjct: 564 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 623

Query: 67  ILIDAFCKEGRMDDATMMFSK--MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            L+  F        A  + S   +  +   +     +CL    F+  ++  A  + +E+ 
Sbjct: 624 ALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK 683

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  + P    Y+ L+ GLCK G + EA       + + L PD    +I I  YCK  +  
Sbjct: 684 KCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYD 741

Query: 185 EAMQLYDSMLRNGIMP 200
             ++    +L N  +P
Sbjct: 742 NCLEFMKLVLDNKFVP 757


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 119/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A +L  ++ ++G +P   TY  +I   C +   D+A+++ +++      PN  T+T
Sbjct: 280 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 339

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILID  C+EG++++A  +F KML+ G    ++T++ LI+GY K   + SAF +   M + 
Sbjct: 340 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 399

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PNI +Y+ L++GLC+     +A       +DN LLPD VTY IL+ G+CK G+   A
Sbjct: 400 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 459

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +++SM   G+ PDG   + L D
Sbjct: 460 FNIFNSMNSAGLEPDGFTFTALID 483



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  +F  +   GLEPD  T+  +I G C L RL++A  +   +    +  + +
Sbjct: 452 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 511

Query: 64  TFTILIDAFCKEGR-----------------------------------MDDATMMFSKM 88
           TFT LID  CK G+                                   +++A  M  KM
Sbjct: 512 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 571

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           ++ G   +VVT++ LI+G+ ++     +  + E M +   SPN+ +Y+I+I+GLC  G +
Sbjct: 572 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 631

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EEA           + P+  TYA+L++ + KAGR   A Q+  +M++NG  P+  + S L
Sbjct: 632 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 691



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 105/195 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A  +F ++   GL P IIT+N +I GYC    +  A QL   +     KPN
Sbjct: 345 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 404

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L++  C+  +   A ++  ++++ G   + VTY+ L+DG+ K   +  AF+++ 
Sbjct: 405 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 464

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+  +++ LIDGLCK G +E+A       +   +  D VT+  LI G+CK G
Sbjct: 465 SMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 524

Query: 182 RPTEAMQLYDSMLRN 196
           +  +   L+++M+ N
Sbjct: 525 KAKDVCFLFENMVEN 539



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 35/233 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + +A +L   +     +P+I TYN ++ G C +++  +A  L  ++    L P+ +
Sbjct: 382 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 441

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D FCKEG+++ A  +F+ M   G + +  T++ LIDG  K   ++ A  +   M
Sbjct: 442 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 501

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH--------------------- 162
            +  IS + V+++ LIDG CK G  ++  + F   ++N                      
Sbjct: 502 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 561

Query: 163 --------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                         L+P VVT+ ILI G+C+AG    ++++ + M + G  P+
Sbjct: 562 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 20/230 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  + G++   GL P ++T+  +I G+C       ++++ E++      PN
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C  GR+++A  +   M   G   N  TY+ L+  + K+  +  AF +  
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 674

Query: 122 EMCENNISPNIVSYSILIDG--LCKRGLMEEALYAF--------------HCALDNHL-- 163
            M +N   PN   YS L+ G  L    +   AL +               +  L N +  
Sbjct: 675 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKK 734

Query: 164 --LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             +P    Y  L+ G CK GR  EA QL   M+++G+ PD  + S +  Y
Sbjct: 735 CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY 784



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 6/216 (2%)

Query: 1   MLIKECH--LDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           +LI+EC    +  +KL G L   T+ G       Y+T++     LN    A  ++ ++  
Sbjct: 128 LLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVN 187

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
                  I +  +++A CK G +  A M   K+L  G   +    + L+    +  ++  
Sbjct: 188 EGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGE 247

Query: 116 AFDVYEEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
           AF V+E+M  E N  PN V+YSILI GLC+ G +EEA       ++    P   TY +LI
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  C  G   +AM++ D M     +P+    + L D
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 343



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 54/240 (22%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +LK+  ++   G  P++ TY  II G C+  R++EA  +   ++   + PN  T+ +L+ 
Sbjct: 599 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 658

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF-----------DV 119
           A  K GR+D A  + S M++ G + N   YS L+ G+  S     A             +
Sbjct: 659 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSL 718

Query: 120 YEEMCENNISPNIVS---------YSILIDGLCKRGLMEEA------------------- 151
             E  +NN   N +          Y+ L+ GLCK G + EA                   
Sbjct: 719 SSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAIS 778

Query: 152 -LYAFHC--------------ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            +   +C               LDN  +P   +Y  +I G    GR  EA +L   ++R+
Sbjct: 779 SIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 35/211 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR------------------- 42
           L K   L+ A  + G +  +G+  D +T+  +I G+C + +                   
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 544

Query: 43  ----------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                           L+EA  +  K+    L P+ +T TILI+  C+ G    +  M  
Sbjct: 545 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 604

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M + G   NV TY+ +I+G   +  ++ A  +   M    +SPN  +Y++L+    K G
Sbjct: 605 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 664

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ A       + N   P+   Y+ L+ G+
Sbjct: 665 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 119/204 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A +L  ++ ++G +P   TY  +I   C +   D+A+++ +++      PN  T+T
Sbjct: 257 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 316

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILID  C+EG++++A  +F KML+ G    ++T++ LI+GY K   + SAF +   M + 
Sbjct: 317 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 376

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PNI +Y+ L++GLC+     +A       +DN LLPD VTY IL+ G+CK G+   A
Sbjct: 377 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 436

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +++SM   G+ PDG   + L D
Sbjct: 437 FNIFNSMNSAGLEPDGFTFTALID 460



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  +F  +   GLEPD  T+  +I G C L RL++A  +   +    +  + +
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 488

Query: 64  TFTILIDAFCKEGR-----------------------------------MDDATMMFSKM 88
           TFT LID  CK G+                                   +++A  M  KM
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           ++ G   +VVT++ LI+G+ ++     +  + E M +   SPN+ +Y+I+I+GLC  G +
Sbjct: 549 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 608

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EEA           + P+  TYA+L++ + KAGR   A Q+  +M++NG  P+  + S L
Sbjct: 609 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 668



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 105/195 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A  +F ++   GL P IIT+N +I GYC    +  A QL   +     KPN
Sbjct: 322 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 381

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L++  C+  +   A ++  ++++ G   + VTY+ L+DG+ K   +  AF+++ 
Sbjct: 382 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 441

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+  +++ LIDGLCK G +E+A       +   +  D VT+  LI G+CK G
Sbjct: 442 SMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 501

Query: 182 RPTEAMQLYDSMLRN 196
           +  +   L+++M+ N
Sbjct: 502 KAKDVCFLFENMVEN 516



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 35/233 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + +A +L   +     +P+I TYN ++ G C +++  +A  L  ++    L P+ +
Sbjct: 359 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 418

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D FCKEG+++ A  +F+ M   G + +  T++ LIDG  K   ++ A  +   M
Sbjct: 419 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 478

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH--------------------- 162
            +  IS + V+++ LIDG CK G  ++  + F   ++N                      
Sbjct: 479 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 538

Query: 163 --------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                         L+P VVT+ ILI G+C+AG    ++++ + M + G  P+
Sbjct: 539 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 36/246 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  + G++   GL P ++T+  +I G+C       ++++ E++      PN
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C  GR+++A  +   M   G   N  TY+ L+  + K+  +  AF +  
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 651

Query: 122 EMCENNISPNIVSYSILIDG------------------LCKRGLMEE-------ALYAFH 156
            M +N   PN   YS L+ G                  L  R L  E       + + F 
Sbjct: 652 TMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFR 711

Query: 157 CALDNHLL-----------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
               +H L           P    Y  L+ G CK GR  EA QL   M+++G+ PD  + 
Sbjct: 712 LMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAIS 771

Query: 206 STLADY 211
           S +  Y
Sbjct: 772 SIIEHY 777



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 6/216 (2%)

Query: 1   MLIKECH--LDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           +LI+EC    +  +KL G L   T+ G       Y+T++     LN    A  ++ ++  
Sbjct: 105 LLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVN 164

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
                  I +  +++A CK G +  A M   K+L  G   +    + L+    +  ++  
Sbjct: 165 EGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGE 224

Query: 116 AFDVYEEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
           AF V+E+M  E N  PN V+YSILI GLC+ G +EEA       ++    P   TY +LI
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  C  G   +AM++ D M     +P+    + L D
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 320



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 72/257 (28%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +LK+  ++   G  P++ TY  II G C+  R++EA  +   ++   + PN  T+ +L+ 
Sbjct: 576 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 635

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY----------------------- 107
           A  K GR+D A  + S M++ G + N   YS L+ G+                       
Sbjct: 636 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSL 695

Query: 108 --------------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA-- 151
                         F+  ++  A  + +E+ +  + P    Y+ L+ GLCK G + EA  
Sbjct: 696 SSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQ 754

Query: 152 ------------------LYAFHC--------------ALDNHLLPDVVTYAILIRGYCK 179
                             +   +C               LDN  +P   +Y  +I G   
Sbjct: 755 LTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRN 814

Query: 180 AGRPTEAMQLYDSMLRN 196
            GR  EA +L   ++R+
Sbjct: 815 EGRVQEAQKLVSDLVRH 831



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 35/211 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR------------------- 42
           L K   L+ A  + G +  +G+  D +T+  +I G+C + +                   
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 521

Query: 43  ----------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                           L+EA  +  K+    L P+ +T TILI+  C+ G    +  M  
Sbjct: 522 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 581

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M + G   NV TY+ +I+G   +  ++ A  +   M    +SPN  +Y++L+    K G
Sbjct: 582 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 641

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ A       + N   P+   Y+ L+ G+
Sbjct: 642 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 4/196 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +   ++  G+ P+  TY  ++  +    RLD A Q+   +     +PNS  ++
Sbjct: 607 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 666

Query: 67  ILIDAFCKEGRMDDATMMFSK--MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            L+  F        A  + S   +  +   +     +CL    F+  ++  A  + +E+ 
Sbjct: 667 ALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK 726

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  + P    Y+ L+ GLCK G + EA       + + L PD    +I I  YCK  +  
Sbjct: 727 KCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYD 784

Query: 185 EAMQLYDSMLRNGIMP 200
             ++    +L N  +P
Sbjct: 785 NCLEFMKLVLDNKFVP 800


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L+ ++  +G+ P++ TYNT+I G+C +  L EA  L  ++    + P+
Sbjct: 243 LCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPD 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILIDA  KEG++D+A  +F +M  K    N+VTY+ LIDG  K+ +++ A  + +
Sbjct: 303 VYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I P++ SY+IL+D LCK G +E A   F   L      +V TY ++I G CKAG
Sbjct: 363 KMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 422

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + M L   M   G MPD +   T+
Sbjct: 423 LFGDVMDLKSKMEGKGCMPDAITFKTI 449



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL    ++  +G + D ++Y T+I G C         +L  KL    +KP+ + +T 
Sbjct: 179 IKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTT 238

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK  R+ DA  ++S+M+ KG   NV TY+ LI G+    N+K AF +  EM   N
Sbjct: 239 IIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKN 298

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +++ILID L K G ++EA+  F      ++ P++VTY  LI G CK      A+
Sbjct: 299 INPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 358

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M   GI PD    + L D
Sbjct: 359 ALCKKMKEQGIQPDVYSYTILLD 381



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K     A  +L  +L    ++PD++ Y TII   C   R+ +A  L+ ++    + PN
Sbjct: 208 LCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPN 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI  FC  G + +A  + ++M  K    +V T++ LID   K   +  A  ++E
Sbjct: 268 VFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFE 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+ PNIV+Y+ LIDGLCK   +E A+       +  + PDV +Y IL+   CK G
Sbjct: 328 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 387

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A Q +  +L  G
Sbjct: 388 RLENAKQFFQHLLVKG 403



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 99/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    + LF Q    G+ P++ T N +I  +C L  +  A  +F  +      P+
Sbjct: 103 LVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPD 162

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   LI   C  G +  A     K++ +G + + V+Y  LI+G  K+   K+   +  
Sbjct: 163 AITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLR 222

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  +++ P++V Y+ +I  LCK   + +A   +   +   + P+V TY  LI G+C  G
Sbjct: 223 KLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMG 282

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  L + M    I PD    + L D
Sbjct: 283 NLKEAFSLLNEMKLKNINPDVYTFNILID 311



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 83/144 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A+ LF ++  + + P+I+TY ++I G C  + L+ A+ L +K+    ++P+
Sbjct: 313 LGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TIL+DA CK GR+++A   F  +L KG   NV TY+ +I+G  K+       D+  
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 432

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M      P+ +++  +I  L ++
Sbjct: 433 KMEGKGCMPDAITFKTIICALFEK 456



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 82/184 (44%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ I+            + LF++     + PN  T  ILI+ FC    +  A  +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+ +L++G   + +T + LI G      +K A   ++++       + VSY  LI+GLCK
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G  +           + + PDVV Y  +I   CK  R  +A  LY  M+  GI P+   
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 205 LSTL 208
            +TL
Sbjct: 271 YNTL 274



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ L  ++ ++G++PD+ +Y  ++   C   RL+ A Q F+ L       N
Sbjct: 348 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 407

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ++I+  CK G   D   + SKM  KG   + +T+  +I   F+      A     
Sbjct: 408 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLR 467

Query: 122 EM 123
           EM
Sbjct: 468 EM 469



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 42/91 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A + F  L  +G   ++ TYN +I G C      + + L  K+      P+
Sbjct: 383 LCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPD 442

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +ITF  +I A  ++   D A     +M+ +G
Sbjct: 443 AITFKTIICALFEKDENDKAEKFLREMIARG 473


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   AL +  ++   G+ P ++TY  +I   C    L+ A++ F+++    L+PN  
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID F ++G +++A  + ++M E G   +VVTY+  I G+   + M+ A  V +EM
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++P++VSYS +I G C++G ++ A       ++  + PD VTY+ LI+G C+  R 
Sbjct: 451 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           TEA  L   ML  G+ PD    +TL +
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLIN 537



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A ++  ++  +G  PD +TYNT++ GYC      +A+ +  ++    + P+
Sbjct: 294 LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 353

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI++ CK   ++ A   F +M  +G + N  TY+ LIDG+ +   +  A+ +  
Sbjct: 354 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 413

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  SP++V+Y+  I G C    MEEAL      ++  L PDVV+Y+ +I G+C+ G
Sbjct: 414 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A Q+   M+  G+ PD +  S+L
Sbjct: 474 ELDRAFQMKQEMVEKGVSPDAVTYSSL 500



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A++ F Q+  RGL P+  TY T+I G+     L+EA ++  ++T     P+ +
Sbjct: 366 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 425

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   I   C   RM++A  +  +M+EKG   +VV+YS +I G+ +   +  AF + +EM
Sbjct: 426 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +SP+ V+YS LI GLC+   + EA       LD  L PD  TY  LI  YC  G  
Sbjct: 486 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 545

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A+ L+D M+  G +PD +  S L +
Sbjct: 546 NKALHLHDEMIHKGFLPDAVTYSVLIN 572



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L   ++ +G++P++I+YN II G C    + EA ++ E++      P+ +
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++ +CKEG    A ++ ++M+  G   +VVTY+ LI+   K++N+  A + +++M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ LIDG  ++GL+ EA    +   ++   P VVTY   I G+C   R 
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+ +   M+  G+ PD +  ST+
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTI 465



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 9/216 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   L  FG++   G  P+++TYNT+I  YC + R+DEA  L + ++   ++PN I++ +
Sbjct: 230 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  C+EG M +A  +  +M  KG   + VTY+ L++GY K  N   A  ++ EM  N 
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP++V+Y+ LI+ +CK   +  A+  F       L P+  TY  LI G+ + G   EA 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           ++ + M  +G  P      ++  YN    G   HC+
Sbjct: 410 RILNEMTESGFSP------SVVTYNAFIHG---HCV 436



 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 115/201 (57%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A +++ ++    + P++ TYN +I G+CS+  L + +  F ++      PN +T+  LI
Sbjct: 197 SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI 256

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA+CK GR+D+A  +   M  KG + N+++Y+ +I+G  +  +MK A+++ EEM     +
Sbjct: 257 DAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 316

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ V+Y+ L++G CK G   +AL      + N + P VVTY  LI   CKA     AM+ 
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 376

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +D M   G+ P+    +TL D
Sbjct: 377 FDQMRIRGLRPNERTYTTLID 397



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 115/203 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A ++  ++T+ G  P ++TYN  I G+C L R++EA+ + +++    L P+ ++++ 
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC++G +D A  M  +M+EKG   + VTYS LI G  + + +  A D+ +EM +  
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y+ LI+  C  G + +AL+     +    LPD VTY++LI G  K  R  EA 
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   ++    +P  +   TL +
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIE 607



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 15/220 (6%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  LD A ++  ++ ++G+ PD +TY+++I G C + RL EA  L +++  + L P+  
Sbjct: 471 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD----- 118
           T+T LI+A+C EG ++ A  +  +M+ KG   + VTYS LI+G  K    + A       
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590

Query: 119 VYEEMCENNIS--------PNIVSYSI--LIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +YEE   ++++         NI   S+  LI G C +GLM EA   F   ++ +  P   
Sbjct: 591 IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 650

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            Y ++I G+C+ G   +A  LY  M+ +G +P  + + TL
Sbjct: 651 VYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 690



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 37/218 (16%)

Query: 30  YNTIICGYCSLNRLDEAV-------------------------------------QLFEK 52
           ++ ++  Y  LN +D+AV                                     +++ +
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
           +   ++ PN  T+ ILI  FC  G +      F +M   G   NVVTY+ LID Y K   
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
           +  AF + + M    + PN++SY+++I+GLC+ G M+EA             PD VTY  
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L+ GYCK G   +A+ ++  M+RNG+ P  +  + L +
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 15/212 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L+ AL L  ++  +G  PD +TY+ +I G     R  EA +L  KL   +  P+ +T
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601

Query: 65  FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           +  LI+                FC +G M +A  +F  M+E+  K     Y+ +I G+ +
Sbjct: 602 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCR 661

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
             N+  AF++Y+EM  +   P+ V+   LI  L K G+ EE        L +  L +   
Sbjct: 662 GGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAEL 721

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +L+    K G     + +   M ++G++P+
Sbjct: 722 AKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 118/208 (56%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K  ++  A  +  ++  +GL+P++ T+ ++I G C +   + A +LF KL      KP
Sbjct: 265 LCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKP 324

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T++I  +CKEG++  A M+  +M+E+G   N  TY+ LI G+ K  +   AF++ 
Sbjct: 325 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELM 384

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M      PNI +Y+ LIDGLCK+G ++EA      A +  L  D VTY ++I  +CK 
Sbjct: 385 NKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQ 444

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G  T A+ L++ M  NG  PD    +TL
Sbjct: 445 GHITYALDLFNRMAENGCHPDIHTYTTL 472



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A  L G++ ++GL P+  TY T+I G+C     + A +L  K+     +PN  
Sbjct: 338 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIY 397

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID  CK+G++ +A  +      +G + + VTY+ +I  + K  ++  A D++  M
Sbjct: 398 TYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRM 457

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN   P+I +Y+ LI   C++  MEE+   F   L   L+P   TY  +I GYCK G+ 
Sbjct: 458 AENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKS 517

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T A+++++ M++NG   D +    L
Sbjct: 518 TSALRVFERMVQNGCQADSITYGAL 542



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 2/200 (1%)

Query: 11  ALKLF-GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A K+F G +T  GL PD  ++  +I G C   R++E   L   +       ++ T T+++
Sbjct: 168 ARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIV 227

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC++GR  D + +F +MLE G   NVV Y+  IDG  K   +K AF V EEM    + 
Sbjct: 228 RVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLK 287

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           PN+ +++ LI+GLCK G  E A   F      +   P+V TY ++I GYCK G+   A  
Sbjct: 288 PNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEM 347

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L   M+  G+ P+    +TL
Sbjct: 348 LLGRMVEQGLAPNTNTYTTL 367



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE   + A +L  ++   G +P+I TYN +I G C   ++ EA ++        L+ + +
Sbjct: 373 KEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKV 432

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++I   CK+G +  A  +F++M E G   ++ TY+ LI  Y + + M+ +  ++++ 
Sbjct: 433 TYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKC 492

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P   +Y+ +I G CK G    AL  F   + N    D +TY  LI G CK  R 
Sbjct: 493 LAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRL 552

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA  LY+ ML   ++P  +   TLA
Sbjct: 553 EEARALYEGMLDKRLVPCEVTPVTLA 578



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 3/151 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H+  AL LF ++ + G  PDI TY T+I  YC   +++E+ +LF+K   ++L P   
Sbjct: 443 KQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQ 502

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I  +CK G+   A  +F +M++ G +A+ +TY  LI G  K   ++ A  +YE M
Sbjct: 503 TYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            +  + P  V+   L    C+R   E+A+ A
Sbjct: 563 LDKRLVPCEVTPVTLAFEYCRR---EKAVVA 590



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 95/192 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A K+     ++GL+ D +TY  +I  +C    +  A+ LF ++      P+
Sbjct: 406 LCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPD 465

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LI  +C++ +M+++  +F K L         TY+ +I GY K     SA  V+E
Sbjct: 466 IHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFE 525

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N    + ++Y  LI GLCK   +EEA   +   LD  L+P  VT   L   YC+  
Sbjct: 526 RMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRRE 585

Query: 182 RPTEAMQLYDSM 193
           +   A+ + D +
Sbjct: 586 KAVVAVSILDRL 597


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 114/203 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALKLF Q+ +    P + TY  II   C L R  EA+ +F+++T    +PN  T+T+
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI + C++   DDA  + + MLEKG   +VVTY+ LIDGY K     SA ++   M  NN
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN  +Y+ LI G C+   + +A+   H  L+  L P+VVTY ILI G CK G    A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  +G++PD    S   D
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFID 492



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++ + D A K+   + ++GL P ++TYN +I GYC       A+++   +      PN
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPN 413

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  LI  FC+   +  A  +  KMLE+  + NVVTY+ LI G  K  ++ SA+ +  
Sbjct: 414 ARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLS 473

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E+ + P+  +YS+ ID LCKRGL+EEA   F    +  +  + V Y+ LI GYCK G
Sbjct: 474 LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + ++   L D ML  G +P+ +  ++L D
Sbjct: 534 KVSDGRFLLDKMLSAGCVPNSITYNSLID 562



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 105/207 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L +A KL   + + GL PD  TY+  I   C    ++EA  LFE L    +K N +
Sbjct: 461 KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV 520

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID +CK G++ D   +  KML  G   N +TY+ LIDGY K +N K A  + + M
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIM 580

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + +I P   +Y+ILID L K    ++A   F   L     PDV  Y   I  YC  GR 
Sbjct: 581 IKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRL 640

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A  L   M   GIMPD +L +   D
Sbjct: 641 KDAEVLICKMNAKGIMPDTMLYTLFID 667



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 105/195 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++DAA  +F  + ++G   + ++Y  +I G+C   R+DEA++LF ++      P   T+T
Sbjct: 254 NVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYT 313

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I A C+ GR  +A  MF +M EK  + NV TY+ LI    +  N   A  +   M E 
Sbjct: 314 VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ LIDG CK+GL   AL        N+  P+  TY  LI G+C+     +A
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKA 433

Query: 187 MQLYDSMLRNGIMPD 201
           M L   ML   + P+
Sbjct: 434 MSLLHKMLERKLQPN 448



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 100/201 (49%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL++   +      P+  TYN +I G+C    + +A+ L  K+   +L+PN +T+ ILI
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              CKEG +  A  + S M E G   +  TYS  ID   K   ++ A  ++E + E  I 
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N V YS LIDG CK G + +  +     L    +P+ +TY  LI GYCK     EA  L
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            D M++  I P     + L D
Sbjct: 577 VDIMIKRDIEPAADTYTILID 597



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 108/203 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D    ++ ++ D  + P+I T NT++ GYC L  + EA     K+    L  ++ T+T 
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C+   +D A  +F  M  KG   N V+Y+ LI G+ +++ +  A  ++ +M E+N
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P + +Y+++I  LC+ G   EAL  F    + H  P+V TY +LI   C+     +A 
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++ + ML  G++P  +  + L D
Sbjct: 365 KILNGMLEKGLIPSVVTYNALID 387



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 96/186 (51%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++   GL  D  TY ++I GYC    +D A  +F  +       N +++T LI  FC+  
Sbjct: 229 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 288

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R+D+A  +FS+M E      V TY+ +I    +      A ++++EM E +  PN+ +Y+
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           +LI  LC+    ++A    +  L+  L+P VVTY  LI GYCK G    A+++   M  N
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 197 GIMPDG 202
              P+ 
Sbjct: 409 NCSPNA 414



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 2/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF  L ++G++ + + Y+T+I GYC + ++ +   L +K+      PN
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           SIT+  LID +CKE    +A ++   M+++  +    TY+ LID   K      A D+++
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFD 613

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKA 180
           +M      P++  Y+  I   C  G +++A     C ++   ++PD + Y + I  Y + 
Sbjct: 614 QMLSTGSHPDVFIYTAFIHAYCSHGRLKDA-EVLICKMNAKGIMPDTMLYTLFIDAYGRF 672

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G    A  +   M   G  P
Sbjct: 673 GSIDGAFGILKRMHEVGCEP 692



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 29/228 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D A  +F Q+   G  PD+  Y   I  YCS  RL +A  L  K+    + P+
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY-------------- 107
           ++ +T+ IDA+ + G +D A  +  +M E G + +  TYSCLI                 
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSEL 718

Query: 108 ---------------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                          ++  + +   D++ +M E+  +PN  +Y   I GLCK G +E A 
Sbjct: 719 SDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAH 778

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             F    +    P+   Y  L+   C+ G   EA++  D M+ N  +P
Sbjct: 779 RLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLP 826



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 89/172 (51%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YN ++        +DE   ++ ++    + PN  T   +++ +CK G + +A +  SK++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           + G   +  TY+ LI GY +++N+ +A  ++  M       N VSY+ LI G C+   ++
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           EAL  F    +++  P V TY ++I   C+ GR TEA+ ++  M      P+
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 29/227 (12%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A  L   +  R +EP   TY  +I      +  D+A  +F+++      P+  
Sbjct: 566 KEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVF 625

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T  I A+C  GR+ DA ++  KM  KG   + + Y+  ID Y +  ++  AF + + M
Sbjct: 626 IYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM 685

Query: 124 CENNISPNIVSYSILIDGL-----------------------------CKRGLMEEALYA 154
            E    P+  +YS LI  L                              +R   E  L  
Sbjct: 686 HEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDL 745

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           F    ++   P+  TY   I G CK G    A +L+D M   G  P+
Sbjct: 746 FGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPN 792



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            L LFG++ + G  P+  TY   I G C +  L+ A +LF+ +      PN   +  L+ 
Sbjct: 742 TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLG 801

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ G   +A      M+E     ++ +   L+ G +   N + A  V+    +   + 
Sbjct: 802 CSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNY 861

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           + + + +LIDGL K+GL ++    F             TY++LI G+
Sbjct: 862 DEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 43.1 bits (100), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 61/135 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A +LF  + ++G  P+   YN+++   C L    EA++  + +   +  P+  +  +
Sbjct: 774 LEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKL 833

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+     EG  + A  +F   L+     + + +  LIDG  K        D++  M    
Sbjct: 834 LLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQG 893

Query: 128 ISPNIVSYSILIDGL 142
              +  +YS+LI+G 
Sbjct: 894 CQIHPKTYSMLIEGF 908


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 124/209 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A  L+ ++  +G+ PD++TY+ ++ G+C + +L+ A+ L  ++    + P+
Sbjct: 208 LCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPD 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TIL+DA CKEG++ +A  + + M++     +VV YS L+DGY     + +A  V+ 
Sbjct: 268 IYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFY 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++P++  YSI+I+GLCK   ++EAL  F      +++PD VTY  LI   CK+G
Sbjct: 328 TMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSG 387

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R +    L+D ML  G  PD +  + L D
Sbjct: 388 RISYVWDLFDEMLDRGQPPDVITYNNLID 416



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 117/196 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A ++F  +T  G+ PD+  Y+ +I G C + R+DEA+ LFE++    + P+++T+T 
Sbjct: 319 VNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTS 378

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+     +F +ML++G   +V+TY+ LID   K+ ++  A  ++ +M +  
Sbjct: 379 LIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQA 438

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+ +++IL+DGLCK G ++ AL  F   L      +V TY ++I G CK G   EA+
Sbjct: 439 IRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEAL 498

Query: 188 QLYDSMLRNGIMPDGL 203
            L   M  NG + D +
Sbjct: 499 ALQSRMEDNGCISDAV 514



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 126/236 (53%), Gaps = 17/236 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +    +  D++ Y+T++ GYC +N ++ A ++F  +T + + P+
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++I+I+  CK  R+D+A  +F ++ +K    + VTY+ LID   KS  +   +D+++
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFD 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    P++++Y+ LID LCK G ++ A+  F+   D  + P+V T+ IL+ G CK G
Sbjct: 398 EMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG 457

Query: 182 RPTEAMQLYDSMLR--------------NGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R   A++ +  +L               NG+  +GLL   LA   LQS      CI
Sbjct: 458 RLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA---LQSRMEDNGCI 510



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 109/193 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL LF ++  + + PD +TY ++I   C   R+     LF+++      P+ IT+ 
Sbjct: 353 RVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYN 412

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA CK G +D A  +F+KM ++  + NV T++ L+DG  K   +K+A + ++++   
Sbjct: 413 NLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTK 472

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               N+ +Y+++I+GLCK GL++EAL       DN  + D VT+ I+IR +       +A
Sbjct: 473 GYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKA 532

Query: 187 MQLYDSMLRNGIM 199
            +L   M+  G++
Sbjct: 533 EKLVREMIARGLL 545



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 109/197 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+   ++  +G     I+Y  +I G C +     A++L  ++    ++PN + 
Sbjct: 141 EGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVI 200

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++++ID  CK+  +D+A  ++++M+ KG   +VVTYS L+ G+     +  A D+  EM 
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             NI+P+I +Y+IL+D LCK G ++EA       +   +  DVV Y+ L+ GYC      
Sbjct: 261 LENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVN 320

Query: 185 EAMQLYDSMLRNGIMPD 201
            A +++ +M + G+ PD
Sbjct: 321 NAKRVFYTMTQMGVTPD 337



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 107/201 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A+ L+ Q+    +EPD  T N II  +C   ++  A     K+  +  +PN+IT   L+
Sbjct: 76  TAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLM 135

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C EG++ +A     K+L +G + + ++Y  LI+G  K    ++A  +   +   +I 
Sbjct: 136 KGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIR 195

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V YS++ID LCK  L++EA   +   +   + PDVVTY+IL+ G+C  G+   A+ L
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+   I PD    + L D
Sbjct: 256 LNEMVLENINPDIYTYTILVD 276



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 3/208 (1%)

Query: 6   CHLDAALKLFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH    +  F    ++   G +P+ IT NT++ G C   ++ EA++  +K+     + + 
Sbjct: 104 CHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSG 163

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           I++ ILI+  CK G    A  +  ++     + NVV YS +ID   K   +  A+D+Y E
Sbjct: 164 ISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTE 223

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP++V+YSIL+ G C  G +  A+   +  +  ++ PD+ TY IL+   CK G+
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  +   M++  +  D ++ STL D
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMD 311



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 97/201 (48%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+  F  +      P    +N I+    ++ R   A+ L++++   +++P+  T  I+
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC  G++  A    SK+L+ G + N +T + L+ G      +K A   ++++     
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             + +SY ILI+G+CK G    A+          + P+VV Y+++I   CK     EA  
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 189 LYDSMLRNGIMPDGLLLSTLA 209
           LY  M+  GI PD +  S L 
Sbjct: 220 LYTEMVGKGISPDVVTYSILV 240


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 40/249 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------- 54
           L K   L+ A +L G ++ R   P+++TY+ +I G C + R+DEA +L +++T       
Sbjct: 261 LCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 320

Query: 55  --------------------------------CVQLKPNSITFTILIDAFCKEGRMDDAT 82
                                            +++ P+++TF+ LID  CK G++D+A 
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F  M+  G   NV+TY+ L++G  K+  M+ A  + E M +  ++P++++YS+L+D  
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 440

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM-LRNGIMPD 201
           CK   ++EAL   H        P+VVT+  +I G CK+ R  EA Q++D M L++G++PD
Sbjct: 441 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500

Query: 202 GLLLSTLAD 210
            +   TL D
Sbjct: 501 KITYCTLID 509



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 126/227 (55%), Gaps = 7/227 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++AA  +   + + G+ P+++TYN ++ G C   R++EA Q  E++      P+
Sbjct: 612 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 671

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           SIT+  L+ A C+  R DDA  + S++   G   + VTY+ L+DG +KS   + A  V E
Sbjct: 672 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLE 731

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL----LPDVVTYAILIRGY 177
           EM      P++V+Y+ LID LCK G +EEA    H  + + +    +P+VVTY++LI G 
Sbjct: 732 EMVGKGHHPDVVTYNTLIDSLCKAGDLEEA-RRLHGDMSSRVSRCCVPNVVTYSVLINGL 790

Query: 178 CKAGRPTEAMQLYDSMLRNG--IMPDGLLLSTLADYNLQSSGSQEHC 222
           CK GR  EA +L   M+R    ++P+ +  ++  D   + S   E C
Sbjct: 791 CKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 4/223 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L A ++LF +L +RG  PD++TYNT+I   C    L+EA +L   ++     PN
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
            +T+++LI+  CK GR+D+A  +  +M  K      N++TY+  +DG  K      A ++
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 120 YEEMCENN--ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
              + + +  +SP+ V++S LIDGLCK G ++EA   F   +    +P+V+TY  L+ G 
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           CKA +   A  + +SM+  G+ PD +  S L D   ++S   E
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 448



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 125/214 (58%), Gaps = 5/214 (2%)

Query: 2    LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQ 57
            L K   +D A +L  ++  +  +  P+IITYN+ + G C  + + EA +L   L    ++
Sbjct: 790  LCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLR 849

Query: 58   LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
            + P+++TF+ LID  CK G+ D+A  +F  M+  G   NVVTY+ L++G  K+  M+ A 
Sbjct: 850  VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAH 909

Query: 118  DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             + E M +  ++P++++YS+L+D  CK   ++EAL   H        P+VVT+  +I G 
Sbjct: 910  AMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGL 969

Query: 178  CKAGRPTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
            CK+ +  EA Q++D M L++G+ PD +   TL D
Sbjct: 970  CKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLID 1003



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 116/205 (56%), Gaps = 5/205 (2%)

Query: 11  ALKLF-GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AL++F G++   G+ P I+TYNTII G C  N L   ++LFE+L      P+ +T+  LI
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLI 258

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN--N 127
           D+ CK G +++A  +   M  +    NVVTYS LI+G  K   +  A ++ +EM     +
Sbjct: 259 DSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 318

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILIRGYCKAGRPTE 185
           + PNI++Y+  +DGLCK+ +  EA        D  L   PD VT++ LI G CK G+  E
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A  ++D M+  G +P+ +  + L +
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVN 403



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 120/231 (51%), Gaps = 29/231 (12%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            D A  +F  +   G  P+++TYN ++ G C  ++++ A  + E +    + P+ IT+++L
Sbjct: 871  DEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVL 930

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENN 127
            +DAFCK   +D+A  +   M  +G   NVVT++ +IDG  KS     AF ++++M  ++ 
Sbjct: 931  VDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHG 990

Query: 128  ISPNIVSYSILIDGLCKRGLMEEA-----------LYAFHCALDN--------------- 161
            ++P+ ++Y  LIDGL + G   +A            YAF+C ++                
Sbjct: 991  LAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRML 1050

Query: 162  --HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               L+PD VT+ ILI G CKAG   +A  L++ M+   + PD +    L D
Sbjct: 1051 ELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 1101



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 1/206 (0%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L D   +PD   +N  I G   L  +  A+Q++ ++  ++L P+ +TF ILI   CK G 
Sbjct: 523 LLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGN 582

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            + A+ +F +M+ K  + +V+T+  LIDG  K+  +++A D+ + M    + PN+V+Y+ 
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+ GLCK G +EEA       + +  +PD +TY  L+   C+A R  +A+QL   +   G
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702

Query: 198 IMPDGLLLSTLADYNLQSSGSQEHCI 223
             PD +  + L D  L  SG  E  I
Sbjct: 703 WDPDTVTYNILVD-GLWKSGQTEQAI 727



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 123/227 (54%), Gaps = 9/227 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE---PDIITYNTIICGYCSLNRLDEAVQLFEKL---TC 55
           L K   L+ A +L G ++ R      P+++TY+ +I G C + R+DEA +L +++   +C
Sbjct: 752 LCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC 811

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNM 113
             L PN IT+   +D  CK+  M +A  +   + +   +   + VT+S LIDG  K    
Sbjct: 812 DVL-PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT 870

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A +V+++M      PN+V+Y++L++GLCK   ME A       +D  + PDV+TY++L
Sbjct: 871 DEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVL 930

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  +CKA    EA++L   M   G  P+ +  +++ D   +S  S E
Sbjct: 931 VDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGE 977



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 3/195 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           L K+     A +L   L D  L   PD +T++T+I G C   ++DEA  +F+ +      
Sbjct: 333 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN IT+  L++  CK  +M+ A  M   M++KG   +V+TYS L+D + K+  +  A ++
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYC 178
              M     +PN+V+++ +IDGLCK     EA   F   AL + L+PD +TY  LI G  
Sbjct: 453 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLF 512

Query: 179 KAGRPTEAMQLYDSM 193
           + GR  +A  L D+M
Sbjct: 513 RTGRAGQAEALLDAM 527



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+++ ++ +  L PD +T+N +I G C     ++A  LFE++    L+P+ +TF  LID
Sbjct: 551 ALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 610

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+++ A  +   M   G   NVVTY+ L+ G  KS  ++ A    EEM  +   P
Sbjct: 611 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 670

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y  L+  LC+    ++AL            PD VTY IL+ G  K+G+  +A+ + 
Sbjct: 671 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVL 730

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M+  G  PD +  +TL D
Sbjct: 731 EEMVGKGHHPDVVTYNTLID 750



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + A  LF ++  + L+PD++T+  +I G C   +++ A  + + +  + + PN +
Sbjct: 579 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 638

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   CK GR+++A     +M+  G   + +TY  L+    ++     A  +  E+
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+ V+Y+IL+DGL K G  E+A+      +     PDVVTY  LI   CKAG  
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758

Query: 184 TEAMQLYDSM 193
            EA +L+  M
Sbjct: 759 EEARRLHGDM 768



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 8/180 (4%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNS 62
            K  H+D AL+L   +  RG  P+++T+N+II G C  ++  EA Q+F+ +T    L P+ 
Sbjct: 936  KASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDK 995

Query: 63   ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            IT+  LID   + G    A ++   M    P  +   ++C I+G  K  ++  A      
Sbjct: 996  ITYCTLIDGLFRTGWAGQAEVLLDAM----PDPDTYAFNCCINGLSKLGDVSRAL---HR 1048

Query: 123  MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            M E  + P+ V+++ILI G CK G  E+A   F   +  +L PDV+T+  LI G CKAG+
Sbjct: 1049 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 3/102 (2%)

Query: 18   LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
            L D   +PD   +N  I G   L++L +  +   ++  ++L P+ +TF ILI   CK G 
Sbjct: 1017 LLDAMPDPDTYAFNCCING---LSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGN 1073

Query: 78   MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
             + A+ +F +M+ K  + +V+T+  LIDG  K+  +++ +D+
Sbjct: 1074 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 35/186 (18%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID------------ 105
            K    +F   ++   K G    A  +F   L    + N  TYS L+             
Sbjct: 107 FKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERT 166

Query: 106 -GYF---------------------KSQNMKSAFDVYE-EMCENNISPNIVSYSILIDGL 142
            G+F                     ++     A +++  EM  + ++P IV+Y+ +I+GL
Sbjct: 167 LGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL 226

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK   +   +  F   ++    PDVVTY  LI   CKAG   EA +L+  M     +P+ 
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV 286

Query: 203 LLLSTL 208
           +  S L
Sbjct: 287 VTYSVL 292



 Score = 41.2 bits (95), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 35/154 (22%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS--------------- 136
           G K  + +++  ++   KS +   A D++         PN  +YS               
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 137 -------------------ILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRG 176
                              I++  LC+ G    AL  F   +  + + P +VTY  +I G
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            CK+      M+L++ ++  G  PD +  +TL D
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLID 259


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 117/198 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G +PDI+ YN II   C   R+++A   F+++    ++PN +T+T L++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C   R  DA  + S M++K    NV+TYS L+D + K+  +  A +++EEM   +I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS LI+GLC    ++EA   F   +    L DVV+Y  LI G+CKA R  + M+L+
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G++ + +  +TL
Sbjct: 354 REMSQRGLVSNTVTYNTL 371



 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 124/207 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +  A +LF ++    ++PDI+TY+++I G C  +R+DEA Q+F+ +       +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  LI+ FCK  R++D   +F +M ++G  +N VTY+ LI G+F++ ++  A + + 
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ISP+I +Y+IL+ GLC  G +E+AL  F       +  D+VTY  +IRG CK G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L+ S+   G+ PD +  +T+
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTM 476



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 115/202 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL + G++   G EPD +T  +++ G+C  NR+ +AV L +K+  +  KP+ + + 
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK  R++DA   F ++  KG + NVVTY+ L++G   S     A  +  +M + 
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+++YS L+D   K G + EA   F   +   + PD+VTY+ LI G C   R  EA
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            Q++D M+  G + D +  +TL
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTL 336



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    D  + L  ++   G+  D+ T+N +I  +C   ++  A+ +  K+  +  +P+
Sbjct: 95  IVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPD 154

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   L++ FC+  R+ DA  +  KM+E G K ++V Y+ +ID   K++ +  AFD ++
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    I PN+V+Y+ L++GLC      +A       +   + P+V+TY+ L+  + K G
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA +L++ M+R  I PD +  S+L
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSL 301



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  +  +G   D+++YNT+I G+C   R+++ ++LF +++   L  N++T+ 
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F + G +D A   FS+M   G   ++ TY+ L+ G   +  ++ A  ++E+M + 
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            +  +IV+Y+ +I G+CK G +EEA ++  C+L    L PD+VTY  ++ G C  G   E
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEA-WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 186 AMQLYDSMLRNGIMPDGLLLS 206
              LY  M + G+M +   LS
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS 509



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +++  L+ A+ LF  +      P I+ +N ++     L + D  + L +K+  + ++ + 
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF I+I+ FC   ++  A  +  KML+ G + + VT   L++G+ +   +  A  + ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+IV+Y+ +ID LCK   + +A   F       + P+VVTY  L+ G C + R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A +L   M++  I P+ +  S L D
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLD 268



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 89/153 (58%), Gaps = 2/153 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF +++ RGL  + +TYNT+I G+     +D+A + F ++    + P+  
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   C  G ++ A ++F  M ++    ++VTY+ +I G  K+  ++ A+ ++  +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461

Query: 124 CENNISPNIVSYSILIDGLCKRGLME--EALYA 154
               + P+IV+Y+ ++ GLC +GL+   EALY 
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF  L+ +GL+PDI+TY T++ G C+   L E   L+ K+    L  N  
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506

Query: 64  TFT 66
           T +
Sbjct: 507 TLS 509


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   AL +  ++   G+ P ++TY  +I   C    L+ A++ F+++    L+PN  
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID F ++G +++A  + ++M E G   +VVTY+  I G+   + M+ A  V +EM
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++P++VSYS +I G C++G ++ A       ++  + PD VTY+ LI+G C+  R 
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           TEA  L   ML  G+ PD    +TL
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTL 331



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A ++  ++  +G  PD +TYNT++ GYC      +A+ +  ++    + P+
Sbjct: 90  LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI++ CK   ++ A   F +M  +G + N  TY+ LIDG+ +   +  A+ +  
Sbjct: 150 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  SP++V+Y+  I G C    MEEAL      ++  L PDVV+Y+ +I G+C+ G
Sbjct: 210 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A Q+   M+  G+ PD +  S+L
Sbjct: 270 ELDRAFQMKQEMVEKGVSPDAVTYSSL 296



 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A++ F Q+  RGL P+  TY T+I G+     L+EA ++  ++T     P+ +
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   I   C   RM++A  +  +M+EKG   +VV+YS +I G+ +   +  AF + +EM
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +SP+ V+YS LI GLC+   + EA       LD  L PD  TY  LI  YC  G  
Sbjct: 282 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A+ L+D M+  G +PD +  S L
Sbjct: 342 NKALHLHDEMIHKGFLPDAVTYSVL 366



 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L   ++ +G++P++I+YN II G C    + EA ++ E++      P+ +
Sbjct: 57  KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 116

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++ +CKEG    A ++ ++M+  G   +VVTY+ LI+   K++N+  A + +++M
Sbjct: 117 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 176

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ LIDG  ++GL+ EA    +   ++   P VVTY   I G+C   R 
Sbjct: 177 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 236

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+ +   M+  G+ PD +  ST+
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTI 261



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 9/216 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   L  FG++   G  P+++TYNT+I  YC + R+DEA  L + ++   ++PN I++ +
Sbjct: 26  LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 85

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  C+EG M +A  +  +M  KG   + VTY+ L++GY K  N   A  ++ EM  N 
Sbjct: 86  IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP++V+Y+ LI+ +CK   +  A+  F       L P+  TY  LI G+ + G   EA 
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           ++ + M  +G  P      ++  YN    G   HC+
Sbjct: 206 RILNEMTESGFSP------SVVTYNAFIHG---HCV 232



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 108/188 (57%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P++ TYN +I G+CS+  L + +  F ++      PN +T+  LIDA+CK GR+D+A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +   M  KG + N+++Y+ +I+G  +  +MK A+++ EEM     +P+ V+Y+ L++G 
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK G   +AL      + N + P VVTY  LI   CKA     AM+ +D M   G+ P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 203 LLLSTLAD 210
              +TL D
Sbjct: 186 RTYTTLID 193



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 115/203 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A ++  ++T+ G  P ++TYN  I G+C L R++EA+ + +++    L P+ ++++ 
Sbjct: 201 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 260

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC++G +D A  M  +M+EKG   + VTYS LI G  + + +  A D+ +EM +  
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y+ LI+  C  G + +AL+     +    LPD VTY++LI G  K  R  EA 
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   ++    +P  +   TL +
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIE 403



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 15/220 (6%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  LD A ++  ++ ++G+ PD +TY+++I G C + RL EA  L +++  + L P+  
Sbjct: 267 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 326

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD----- 118
           T+T LI+A+C EG ++ A  +  +M+ KG   + VTYS LI+G  K    + A       
Sbjct: 327 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 386

Query: 119 VYEEMCENNIS--------PNIVSYSI--LIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +YEE   ++++         NI   S+  LI G C +GLM EA   F   ++ +  P   
Sbjct: 387 IYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEA 446

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            Y ++I G+C+ G   +A  LY  M+ +G +P  + + TL
Sbjct: 447 VYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 486



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 79/144 (54%)

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++ PN  T+ ILI  FC  G +      F +M   G   NVVTY+ LID Y K   +  A
Sbjct: 5   RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F + + M    + PN++SY+++I+GLC+ G M+EA             PD VTY  L+ G
Sbjct: 65  FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           YCK G   +A+ ++  M+RNG+ P
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSP 148



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 15/161 (9%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L+ AL L  ++  +G  PD +TY+ +I G     R  EA +L  KL   +  P+ +T
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 397

Query: 65  FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           +  LI+                FC +G M +A  +F  M+E+  K     Y+ +I G+ +
Sbjct: 398 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCR 457

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
             N+  AF++Y+EM  +   P+ V+   LI  L K G+ EE
Sbjct: 458 GGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 498



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 61/121 (50%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+      NV TY+ LI G+     ++     + EM  N   PN+V+Y+ LID  CK G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++EA           + P++++Y ++I G C+ G   EA ++ + M   G  PD +  +T
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 208 L 208
           L
Sbjct: 121 L 121


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +    +L   +   G+ PD+I+YNT+I G+C    +DEA +L E +  V LKPN
Sbjct: 145 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S ++  L+  +CK GR+D A  +F KML  G    VVTY+ ++ G F+++    A ++Y 
Sbjct: 205 SFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 264

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +     I +Y+ +++GLCK   ++EA   F       L  +++T+ I+I    K G
Sbjct: 265 NMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 324

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  +AM L+ ++  NG++PD +    +A+ NL   GS E
Sbjct: 325 RKEDAMDLFAAIPANGLVPDVVTYRVVAE-NLIEEGSLE 362



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 108/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   GL+P+  +YNT++ GYC   R+D A  LF K+    + P  +T+  
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNT 245

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R  +A  ++  M+  G K  + TY+ +++G  KS  +  AF +++ +C   
Sbjct: 246 ILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKG 305

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++++I+I  L K G  E+A+  F     N L+PDVVTY ++     + G   E  
Sbjct: 306 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFD 365

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+ +M +NG  P+  +L+ L
Sbjct: 366 SLFSAMEKNGTAPNSQMLNAL 386



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 108/189 (57%), Gaps = 1/189 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA +K F Q+ + G+ P+I+ +++++ G CS+++ ++  +LF ++  V + PN + F  +
Sbjct: 83  DAEVK-FNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTI 141

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   CKEGR+ +   +   +   G + +V++Y+ LIDG+  +  +  A  + E M    +
Sbjct: 142 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 201

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN  SY+ L+ G CK G ++ A   F   L N + P VVTY  ++ G  +  R +EA +
Sbjct: 202 KPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 261

Query: 189 LYDSMLRNG 197
           LY +M+ +G
Sbjct: 262 LYLNMINSG 270



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 35/230 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +   G+ P+   +N     Y     +D+A+ +F K+    L P+++++  LIDA C
Sbjct: 17  LLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALC 76

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+DDA + F++M+ +G   N+V +S L+ G       +   +++ EM    I PNIV
Sbjct: 77  KLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIV 136

Query: 134 -----------------------------------SYSILIDGLCKRGLMEEALYAFHCA 158
                                              SY+ LIDG C  G ++EA       
Sbjct: 137 FFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGM 196

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   L P+  +Y  L+ GYCKAGR   A  L+  ML NGI P  +  +T+
Sbjct: 197 VSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 88/183 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D+A  LF ++   G+ P ++TYNTI+ G     R  EA +L+  +     K    
Sbjct: 217 KAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIY 276

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK   +D+A  MF  +  KG + N++T++ +I    K    + A D++  +
Sbjct: 277 TYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 336

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N + P++V+Y ++ + L + G +EE    F     N   P+      L+R     G  
Sbjct: 337 PANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 396

Query: 184 TEA 186
           + A
Sbjct: 397 SRA 399



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           GY +   L E   L   +    + PN   F I   A+ K G +D A  +F+KM + G   
Sbjct: 4   GYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSP 63

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           + V+Y  LID   K   +  A   + +M    ++PNIV +S L+ GLC     E+    F
Sbjct: 64  DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELF 123

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              L+  + P++V +  ++   CK GR  E  +L DS+   G+ PD +  +TL D
Sbjct: 124 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLID 178



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 74/141 (52%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  +  +G + +   + + M+  G   N   ++     Y K   +  A D++ +M ++ 
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP+ VSY  LID LCK G +++A   F+  ++  + P++V ++ L+ G C   +  +  
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+  ML  GI P+ +  +T+
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTI 141



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 64/132 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  L  +GL+ +IIT+  +I       R ++A+ LF  +    L P+ +T+ +
Sbjct: 291 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRV 350

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   +FS M + G   N    + L+       ++  A     ++ E N
Sbjct: 351 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 410

Query: 128 ISPNIVSYSILI 139
            S    + S+LI
Sbjct: 411 FSVEASTTSMLI 422


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 1/206 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           + HL AAL +       G+EP +ITY+T+I GY  L    EA+ LF+++    ++P+ I 
Sbjct: 274 QMHLGAAL-METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 332

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++D   + G  D+A  +   M E G   ++VTY+ L+D Y K    + A  + EEM 
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 392

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +   SPNI++YS LID  CK G   +A+  F       L PDVV Y+ L+ G CK G P 
Sbjct: 393 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 452

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA+ L + M  NGI P+ +  ++L D
Sbjct: 453 EALALLEEMADNGIRPNVITYNSLLD 478



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 96/169 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF ++ ++ +EPD I YNT++  +  L   DEA  +   +       + +T+  L+D
Sbjct: 314 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 373

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           ++ K+G+  +A  +  +M ++G   N++TYS LID Y K    + A  +++++ +  + P
Sbjct: 374 SYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 433

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++V YS L+DG CK G  +EAL       DN + P+V+TY  L+  Y +
Sbjct: 434 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 2/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  +F +    G   ++  Y+++IC Y    +L +AV++FE +  V  KPN + +  +
Sbjct: 137 DWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAV 195

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA  K G    A  +F +MLE+G   + +T++ LI    ++   +    ++ EM E  I
Sbjct: 196 IDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 255

Query: 129 SPNIVSYSILIDGLCKRGLME-EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + + V+Y+ LI   C+ G M   A      A  + + P V+TY+ +I GY K G   EA+
Sbjct: 256 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 315

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  M    + PDG+  +T+ D
Sbjct: 316 ALFQEMRNQNVEPDGICYNTMVD 338



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 12/211 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + D A  +   + + G   DI+TYN ++  Y    +  EA+ L E++      PN +T++
Sbjct: 345 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 404

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA+CK G   DA  +F  + + G + +VV YS L+DG  K+ +   A  + EEM +N
Sbjct: 405 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 464

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT---------YAILIRGY 177
            I PN+++Y+ L+D   ++ LM    +     L   LLP V              L+   
Sbjct: 465 GIRPNVITYNSLLDAYGRQCLMVRKTFP---KLRFFLLPRVTMLLKPSMQDDQQSLVDPK 521

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            K      A +++  M +NG+ P+ +  S++
Sbjct: 522 QKQALVLAAARVFREMAKNGVKPNVVTFSSI 552



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 41/179 (22%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+     A+ L  ++  RG  P+I+TY+ +I  YC      +A+ LF+ +    L+P+ +
Sbjct: 377 KQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVV 436

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS------------- 110
            ++ L+D  CK G  D+A  +  +M + G + NV+TY+ L+D Y +              
Sbjct: 437 LYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRF 496

Query: 111 ---------------QNMKSAFD-------------VYEEMCENNISPNIVSYSILIDG 141
                           + +S  D             V+ EM +N + PN+V++S +++ 
Sbjct: 497 FLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNA 555



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITFTILID 70
           L  Q++   L PD + +     G+    + ++ V+ F+ +   Q    + + +T TI I 
Sbjct: 72  LLDQVSAHLLGPDDLPFIVRELGHS--GQWEKVVKSFDWMVLQQNLRSQWDKVTSTI-IS 128

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---CENN 127
           +  + GR D A ++F + +  G   NV  YS LI  Y +S  +  A +++E M   C+  
Sbjct: 129 SLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCK-- 186

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ +ID   K G    AL  F   L+  + PD +T+  LI    +A R  E  
Sbjct: 187 --PNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 244

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +++  M   GI  D +  +TL
Sbjct: 245 RIFAEMEERGIARDDVTYNTL 265



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 42/158 (26%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA + LF  +   GL+PD++ Y+T++ G C     DEA+ L E++    ++PN IT+ 
Sbjct: 416 HRDA-MALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYN 474

Query: 67  ILIDAFCKEGRM-------------------------DD----------------ATMMF 85
            L+DA+ ++  M                         DD                A  +F
Sbjct: 475 SLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVF 534

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +M + G K NVVT+S +++      +++ A ++ E M
Sbjct: 535 REMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAM 572



 Score = 43.1 bits (100), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 62/119 (52%), Gaps = 6/119 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           K+  + AA ++F ++   G++P+++T+++I+  C +C+   +++A  L E +     +  
Sbjct: 523 KQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCA--SVEDASNLLEAMRVFDGRVY 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T  +L+    +  R  DA  +F+++   G    V  Y+ L D  +  +  ++A D +
Sbjct: 581 GVTHGLLMGFRIRVWR--DAETLFNELTTLGHNTAVAFYNALTDVLWHFEQAQAAKDRH 637


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A ++  + T+ GL  D + YNT + GYC +  +++A+   E++    L+PN
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           SITF  LID FC    MD A     KM EKG   +V TY+ LIDGY K       F + E
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  + PN+VSY  LI+ LCK G + EA       +   +LP+   Y +LI G C  G
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG 540

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  +A++ +D M+R+ I P      TL  YN+   G
Sbjct: 541 KVKDALRFFDEMMRSEISP------TLVTYNVLIDG 570



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 112/194 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +   ++ ++G+ P + TYNT+I GY  L   D   Q+ E++  + +KPN +++ 
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK+G++ +A ++   M+ +G   N   Y+ LIDG      +K A   ++EM  +
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP +V+Y++LIDGLCK+G + EA         +   PDV+TY  LI GY  AG  ++ 
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615

Query: 187 MQLYDSMLRNGIMP 200
           + LY++M   GI P
Sbjct: 616 LGLYETMKNLGIKP 629



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A K+F ++ +  L   I+TYNT+I GYC +  LD A ++ E++    + PN
Sbjct: 221 LCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  L+   CK  +M +A  +  +M   G   +  TYS L DG  +  +   A ++YE
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  E  I  N  + SIL++GLCK+G +E+A        +N L+ D V Y   + GYC+ G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+   + M   G+ P+ +  ++L D
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLID 429



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 111/208 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K  +L   ++    +  RG+ P++  YN +I G C   R+ +A ++F+++  + L  + 
Sbjct: 187 VKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSI 246

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LID +CK G +D A  M  +M EK    N++T++ L+ G  K + MK A  + +E
Sbjct: 247 VTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKE 306

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N   P+  +YSIL DGL +      A+  +  A +  +  +  T +IL+ G CK G+
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A ++      NG++ D ++ +T  +
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVN 394



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 103/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA K+  ++ ++ + P+IIT+N+++ G C + ++ EA  L +++      P+  T++
Sbjct: 261 ELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYS 320

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL D   +    + A  ++ +  EKG + N  T S L++G  K   ++ A ++ ++  EN
Sbjct: 321 ILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTEN 380

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  + V Y+  ++G C+ G M +A+          L P+ +T+  LI  +C      +A
Sbjct: 381 GLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKA 440

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +    M   G+ P     +TL D
Sbjct: 441 EEWVKKMAEKGVTPSVETYNTLID 464



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C  D   ++  Q+ + G++P++++Y ++I   C   ++ EA  +   + C  + PN+ 
Sbjct: 468 KLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQ 527

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + +LID  C  G++ DA   F +M+       +VTY+ LIDG  K   +  A D   ++
Sbjct: 528 VYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQI 587

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  SP++++Y+ LI G    G + + L  +    +  + P V TY  LI G  K G  
Sbjct: 588 TSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIE 647

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
               +LY+ ML+  ++PD ++ + +
Sbjct: 648 L-VEKLYNEMLQMNLLPDRVVYNAM 671



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A     Q+T  G  PD+ITYN++I GY +   + + + L+E +  + +KP 
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI    KEG ++    ++++ML+     + V Y+ +I  Y +  N + A+ +++
Sbjct: 631 VRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I P+ ++Y+ LI G  + G +       +      L P   TY IL++G+C   
Sbjct: 690 GMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLK 749

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
             + A   Y  M+ N  +P+  + + L 
Sbjct: 750 DFSGAYVWYREMVENNFLPNASICNELT 777



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 82/166 (49%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           + V LF ++     + ++  +   I A  K   +         M ++G + NV  Y+ LI
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  + + ++ A  +++EMC  N+  +IV+Y+ LIDG CK G ++ A        +  + 
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P+++T+  L+ G CK  +  EA  L   M  NG MPDG   S L D
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFD 324



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL+ ++    L PD + YN +I  Y  +    +A  L + +    + P+ +T+  LI   
Sbjct: 651 KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710

Query: 73  CKEGRMDDATMMFSKMLEK--GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +EG++ +   + + M  K   PKA+  TY  L+ G+   ++   A+  Y EM ENN  P
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKAD--TYDILVKGHCDLKDFSGAYVWYREMVENNFLP 768

Query: 131 NIVSYSILIDGLCKRGLMEEA 151
           N    + L  GL + G ++E 
Sbjct: 769 NASICNELTAGLEQEGRLQEV 789


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A     ++ +RGL+P++ TY  +I GYC    +  A + F+++    + PN
Sbjct: 526 LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN 585

Query: 62  SITFTILIDAFCKEGRMDDATMMF-----------------------------------S 86
            +  T LID +CKEG   +AT +F                                   S
Sbjct: 586 DVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLS 645

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           + LEKG   +V TY+ +I G+ K   +  AF ++E MC+  ISPNI++Y+ LI+GLCK G
Sbjct: 646 EFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAG 705

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +E A   F       L  + VTYA +I GYCK+G  ++A +L+D M   G+ PD  + S
Sbjct: 706 EIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYS 765

Query: 207 TLAD 210
            L D
Sbjct: 766 ALID 769



 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 125/253 (49%), Gaps = 35/253 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L  A++L  +  ++GL PD+ TYN+II G+C    + +A QL E +    + PN
Sbjct: 631 LLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+  CK G ++ A  +F  +  KG   N VTY+ +IDGY KS N+  AF +++
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF--------------------HCA--- 158
           EM    + P+   YS LIDG  K G  E+AL  F                     C    
Sbjct: 751 EMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGK 810

Query: 159 -----------LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                      +D H+ PD VTY ILI  +CK G   EA Q +  M +  +MP+ L  + 
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870

Query: 208 -LADYNLQSSGSQ 219
            L+ YN+    S+
Sbjct: 871 LLSGYNMAGRRSE 883



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 124/213 (58%), Gaps = 1/213 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +LF  +  +GL  + +TY TII GYC    L +A +LF+++T   + P+
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD 760

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S  ++ LID   KEG  + A  +F + ++KG  A+  + + L+DG+ KS  +  A  + E
Sbjct: 761 SFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLE 819

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + ++ P+ V+Y+ILID  CK G ++EA   F      +L+P+ +TY  L+ GY  AG
Sbjct: 820 DMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAG 879

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           R +E   L+D M+   I PDG+  S + D +L+
Sbjct: 880 RRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 109/199 (54%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E     A+++   +  +G++PD++ YN++I G C   +++EA     ++    LKPN 
Sbjct: 492 VQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  LI  +CK G M  A   F +ML  G   N V  + LIDGY K  +   A  ++  
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   ++ P++ +YS LI GL + G ++ A+      L+  L+PDV TY  +I G+CK G 
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A QL++ M + GI P+
Sbjct: 672 IGKAFQLHEYMCQKGISPN 690



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   ++ A ++F  +   G++P+ + Y T+I G+    R  EAV++ + +    ++P+
Sbjct: 456 LCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I   CK  +M++A     +M+E+G K NV TY  LI GY KS  M+ A   ++
Sbjct: 516 VLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFK 575

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I+PN V  + LIDG CK G   EA   F C L   + PDV TY+ LI G  + G
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNG 635

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   AM+L    L  G++PD
Sbjct: 636 KLQGAMELLSEFLEKGLVPD 655



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 104/206 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE +      L  ++    L P   T   II G C    +++A ++FE +  + +KPN+
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T LI    +EGR  +A  +   M +KG + +V+ Y+ +I G  KS+ M+ A D   E
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + PN+ +Y  LI G CK G M+ A   F   L   + P+ V    LI GYCK G 
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            TEA  ++  ML   + PD    S L
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSAL 627



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 100/188 (53%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  ++ ++G  P ++TYN +I G C    +DEA +L + +    L  +  T++ILID F
Sbjct: 257 RLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGF 316

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K+ R  +A +M  +M  KG K   V Y+ LIDG+ +  +   AF V EEM    +  N+
Sbjct: 317 GKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNL 376

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y+ L+ G+CK G ME+A    +  +   + PD  TY  +I GY K    +    L   
Sbjct: 377 FTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE 436

Query: 193 MLRNGIMP 200
           M ++ ++P
Sbjct: 437 MKKSNLVP 444



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L  ++   G++PD  TYN +I GY           L  ++    L P + T  +
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  C+ G ++DA+ +F  M+  G K N V Y+ LI G+ +    + A  + + M +  
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+++ Y+ +I GLCK   MEEA       ++  L P+V TY  LI GYCK+G    A 
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           + +  ML  GI P+ ++ + L D
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALID 594



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 102/187 (54%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  +GL+P  + Y  +I G+       EA ++ E++    +K N  T+  L+   CK G
Sbjct: 331 EMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFG 390

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            M+ A  + ++M+  G K +  TY+ +I+GY K QN     D+  EM ++N+ P   +  
Sbjct: 391 DMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCG 450

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ++I+GLC+ G +E+A   F   +   + P+ V Y  LI+G+ + GR  EA+++   M + 
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510

Query: 197 GIMPDGL 203
           G+ PD L
Sbjct: 511 GVQPDVL 517



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 36/251 (14%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            KE + + AL LF +   +G      + N ++ G+C   ++ EA QL E +    +KP+ +
Sbjct: 773  KEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+TILID  CK G + +A   F  M ++    N +TY+ L+ GY  +      F +++EM
Sbjct: 832  TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891

Query: 124  CENNISPNIVSYSILIDG-----------------------------------LCKRGLM 148
               +I P+ V++S++ID                                    LC++  +
Sbjct: 892  IAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHV 951

Query: 149  EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             E L       +  L   + T + L+R + KAG+   A ++  SM+R   +PD   L+ L
Sbjct: 952  SEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDL 1011

Query: 209  ADYNLQSSGSQ 219
             +    S+ S+
Sbjct: 1012 INVEQDSTDSE 1022



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L+   + +  + +  +  D+ TY  +I  +       E  +L  ++      P+
Sbjct: 211 LLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPS 270

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ++I   C+ G +D+A  +   M +KG  A+V TYS LIDG+ K +    A  + E
Sbjct: 271 LVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLE 330

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P  V+Y+ LIDG  ++G   EA       L   +  ++ TY  L++G CK G
Sbjct: 331 EMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFG 390

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A  L + M+  GI PD
Sbjct: 391 DMEKADALLNEMIMVGIKPD 410



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 35/194 (18%)

Query: 62  SITFTILIDAFCKEGRMDDATMMF-----------------------------------S 86
            + F +LID + K+G  D+A   F                                   +
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            MLE     +V TY+ LI+ +F++ N K    +  EM E   SP++V+Y+++I GLC+ G
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++EA           L+ DV TY+ILI G+ K  R TEA  + + M   G+ P  +  +
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 207 TLADYNLQSSGSQE 220
            L D  ++   S E
Sbjct: 346 ALIDGFMRQGDSGE 359



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 90/195 (46%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D A+  F      G    ++  N ++      N+L+   + +  +    +  +  
Sbjct: 178 KKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVY 237

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI+A  + G   +   +  +M EKG   ++VTY+ +I G  ++  +  AF++ + M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +  ++ +YSILIDG  K+    EA           L P  V Y  LI G+ + G  
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357

Query: 184 TEAMQLYDSMLRNGI 198
            EA ++ + ML  G+
Sbjct: 358 GEAFRVKEEMLARGV 372


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 1/206 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           + HL AAL +       G+EP +ITY+T+I GY  L    EA+ LF+++    ++P+ I 
Sbjct: 275 QMHLGAAL-METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++D   + G  D+A  +   M E G   ++VTY+ L+D Y K    + A  + EEM 
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +   SPNI++YS LID  CK G   +A+  F       L PDVV Y+ L+ G CK G P 
Sbjct: 394 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 453

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA+ L + M  NGI P+ +  ++L D
Sbjct: 454 EALALLEEMADNGIRPNVITYNSLLD 479



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 4/206 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF ++ ++ +EPD I YNT++  +  L   DEA  +   +       + +T+  L+D
Sbjct: 315 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 374

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           ++ K+G+  +A  +  +M ++G   N++TYS LID Y K    + A  +++++ +  + P
Sbjct: 375 SYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 434

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V YS L+DG CK G  +EAL       DN + P+V+TY  L+  Y   GR    ++  
Sbjct: 435 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY---GRQCLMVRKN 491

Query: 191 DSMLRNGIMPD-GLLLSTLADYNLQS 215
              LR  ++P   +LL    DY+ QS
Sbjct: 492 FPKLRFFLLPRVTMLLKPSVDYDQQS 517



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 2/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  +F +    G   ++  Y+++IC Y    +L +AV++FE +  V  KPN + +  +
Sbjct: 138 DWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAV 196

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA  K G    A  +F +MLE+G   + +T++ LI    ++   +    ++ EM E  I
Sbjct: 197 IDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGI 256

Query: 129 SPNIVSYSILIDGLCKRGLME-EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + + V+Y+ LI   C+ G M   A      A  + + P V+TY+ +I GY K G   EA+
Sbjct: 257 ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAI 316

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  M    + PDG+  +T+ D
Sbjct: 317 ALFQEMRNQNVEPDGICYNTMVD 339



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 12/211 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + D A  +   + + G   DI+TYN ++  Y    +  EA+ L E++      PN +T++
Sbjct: 346 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 405

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA+CK G   DA  +F  + + G + +VV YS L+DG  K+ +   A  + EEM +N
Sbjct: 406 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 465

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV-------VTY--AILIRGY 177
            I PN+++Y+ L+D   ++ LM    +     L   LLP V       V Y    L+   
Sbjct: 466 GIRPNVITYNSLLDAYGRQCLMVRKNFP---KLRFFLLPRVTMLLKPSVDYDQQSLVDPK 522

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            K      A +++  M +NG+ P+ +  S++
Sbjct: 523 QKQALVLAAARVFREMAKNGVKPNVVTFSSI 553



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 41/179 (22%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+     A+ L  ++  RG  P+I+TY+ +I  YC      +A+ LF+ +    L+P+ +
Sbjct: 378 KQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVV 437

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY---------------- 107
            ++ L+D  CK G  D+A  +  +M + G + NV+TY+ L+D Y                
Sbjct: 438 LYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRF 497

Query: 108 ---------------FKSQNMK----------SAFDVYEEMCENNISPNIVSYSILIDG 141
                          +  Q++           +A  V+ EM +N + PN+V++S +++ 
Sbjct: 498 FLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNA 556



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITFTILID 70
           L  Q++   L PD + +     G+    + ++ V+ F+ +   Q    + + +T TI I 
Sbjct: 73  LLDQVSAHLLGPDDLPFIVRELGHS--GQWEKVVKSFDWMVLQQNLRSQWDKVTSTI-IS 129

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---CENN 127
           +  + GR D A ++F + +  G   NV  YS LI  Y +S  +  A +++E M   C+  
Sbjct: 130 SLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCK-- 187

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ +ID   K G    AL  F   L+  + PD +T+  LI    +A R  E  
Sbjct: 188 --PNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 245

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +++  M   GI  D +  +TL
Sbjct: 246 RIFAEMEERGIARDDVTYNTL 266



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 42/158 (26%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA + LF  +   GL+PD++ Y+T++ G C     DEA+ L E++    ++PN IT+ 
Sbjct: 417 HRDA-MALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYN 475

Query: 67  ILIDAFC-----------------------------------------KEGRMDDATMMF 85
            L+DA+                                          K+  +  A  +F
Sbjct: 476 SLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVF 535

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +M + G K NVVT+S +++      +++ A  + E M
Sbjct: 536 REMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAM 573



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 62/119 (52%), Gaps = 6/119 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           K+  + AA ++F ++   G++P+++T+++I+  C +C+   +++A  L E +     +  
Sbjct: 524 KQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCA--SVEDASSLLEAMRVFDGRVY 581

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T  +L+    +  R  DA  +F+++   G    V  Y+ L D  +  +  K+A D +
Sbjct: 582 GVTHGLLMGFRIRVWR--DAETLFNELTTLGHNTAVAFYNALTDVLWHFEQAKAAKDRH 638


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 116/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++   +   G++ D+ TYNT+ CG C +NR+++A +L   +T   ++ N +++T 
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    KEG M +A  +F  M  KG + +VVTY+ +IDGY KS +++ A    +EM +  
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+ L+ G C  G ++ AL  F         P+VV Y  LI G  K GR  EA 
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q YD+ML  G+ PD  L S L
Sbjct: 504 QFYDNMLAAGLTPDDTLYSML 524



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 95/191 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F +    G+EP+  TY  +I G+C + +++ A  L   +    +  N I F  +ID
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ G +D A  + + M   G + +V TY+ L  G  +   M+ A  +   M EN +  
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVES 376

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N VSY+ LI    K G M EA   F         P VVTY ++I GY K+G   EA +  
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFK 436

Query: 191 DSMLRNGIMPD 201
             M + G++PD
Sbjct: 437 KEMEKKGLVPD 447



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 104/207 (50%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  + +  D+  Y+ +I  YC    +  A ++F++     ++PN  T+  LI+ FC
Sbjct: 225 VFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFC 284

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G+++ A M+ + M  +G   N + ++ +IDGY +   +  A ++   M    I  ++ 
Sbjct: 285 KIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVY 344

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ L  GLC+   ME+A    H   +N +  + V+Y  LI  + K G   EA +L+  M
Sbjct: 345 TYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDM 404

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQE 220
              G  P  +  + + D  ++S   +E
Sbjct: 405 EGKGSRPSVVTYNVMIDGYIKSGSIRE 431



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           ++ ++++D FCK GRMDDA  +  +M   G K N   Y+ L+D Y + +N     +V +E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P + +Y+IL+DGL   G + +    F      ++  DV  Y+ +I  YC+AG 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              A +++D  + NGI P+
Sbjct: 254 VRRASEVFDECVGNGIEPN 272



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 73/139 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A +LF  +  +G  P ++TYN +I GY     + EA +  +++    L P+  
Sbjct: 390 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVY 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G++D A  +F +M ++G K NVV Y+ LI G  K    + AF  Y+ M
Sbjct: 450 TYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509

Query: 124 CENNISPNIVSYSILIDGL 142
               ++P+   YS+L+  L
Sbjct: 510 LAAGLTPDDTLYSMLVGSL 528



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 99/206 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L  ++   G++ +   YN ++  Y          ++ +++    ++P   
Sbjct: 145 KAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVG 204

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TIL+D     G +     +F ++  K    +V  YS +I+ Y ++ N++ A +V++E 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I PN  +Y  LI+G CK G +E A           +  + + +  +I GYC+ G  
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            +A+++   M R GI  D    +TLA
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLA 350



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 93/183 (50%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++ + ++ G+C   R+D+A +L +++    +K N+  +  L+D + ++        +  +
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G +  V TY+ L+DG   + ++     V++E+   N++ ++  YS +I+  C+ G 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +  A   F   + N + P+  TY  LI G+CK G+   A  L   M   G+  + ++ +T
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 208 LAD 210
           + D
Sbjct: 314 MID 316



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 55/102 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   +  A +   ++  +GL PD+ TY  ++ G+C   ++D A++LFE++     KPN 
Sbjct: 424 IKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNV 483

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           + +T LI    KEGR ++A   +  ML  G   +   YS L+
Sbjct: 484 VAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 41/73 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+LF ++  RG +P+++ Y  +I G     R +EA Q ++ +    L P+   +++
Sbjct: 464 VDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSM 523

Query: 68  LIDAFCKEGRMDD 80
           L+ +   + R D+
Sbjct: 524 LVGSLHTDKRKDE 536


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 117/198 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G +PDI+ YN II   C   R+++A   F+++    ++PN +T+T L++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C   R  DA  + S M++K    NV+TYS L+D + K+  +  A +++EEM   +I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS L++GLC    ++EA   F   +    L DVV+Y  LI G+CKA R  + M+L+
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G++ + +  +TL
Sbjct: 354 REMSQRGLVSNTVTYNTL 371



 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 124/207 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +  A +LF ++    ++PDI+TY++++ G C  +R+DEA Q+F+ +       +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  LI+ FCK  R++D   +F +M ++G  +N VTY+ LI G+F++ ++  A + + 
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ISP+I +Y+IL+ GLC  G +E+AL  F       +  D+VTY  +IRG CK G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L+ S+   G+ PD +  +T+
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTM 476



 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 115/202 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL + G++   G EPD +T  +++ G+C  NR+ +AV L +K+  +  KP+ + + 
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK  R++DA   F ++  KG + NVVTY+ L++G   S     A  +  +M + 
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+++YS L+D   K G + EA   F   +   + PD+VTY+ L+ G C   R  EA
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEA 314

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            Q++D M+  G + D +  +TL
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTL 336



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    D  + L  ++   G+  D+ T+N +I  +C   ++  A+ +  K+  +  +P+
Sbjct: 95  IVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPD 154

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   L++ FC+  R+ DA  +  KM+E G K ++V Y+ +ID   K++ +  AFD ++
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    I PN+V+Y+ L++GLC      +A       +   + P+V+TY+ L+  + K G
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +L++ M+R  I PD +  S+L +
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSLVN 303



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  +  +G   D+++YNT+I G+C   R+++ ++LF +++   L  N++T+ 
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F + G +D A   FS+M   G   ++ TY+ L+ G   +  ++ A  ++E+M + 
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            +  +IV+Y+ +I G+CK G +EEA ++  C+L    L PD+VTY  ++ G C  G   E
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEA-WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 186 AMQLYDSMLRNGIMPDGLLLS 206
              LY  M + G+M +   LS
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS 509



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +++  L+ A+ LF  +      P I+ +N ++     L + D  + L +K+  + ++ + 
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF I+I+ FC   ++  A  +  KML+ G + + VT   L++G+ +   +  A  + ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+IV+Y+ +ID LCK   + +A   F       + P+VVTY  L+ G C + R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A +L   M++  I P+ +  S L D
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLD 268



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 89/153 (58%), Gaps = 2/153 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF +++ RGL  + +TYNT+I G+     +D+A + F ++    + P+  
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   C  G ++ A ++F  M ++    ++VTY+ +I G  K+  ++ A+ ++  +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461

Query: 124 CENNISPNIVSYSILIDGLCKRGLME--EALYA 154
               + P+IV+Y+ ++ GLC +GL+   EALY 
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF  L+ +GL+PDI+TY T++ G C+   L E   L+ K+    L  N  
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506

Query: 64  TFT 66
           T +
Sbjct: 507 TLS 509


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 124/219 (56%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A +L   +   G+ PD+I+YNT++ G+C   R+DEA +L + +  + LKP+
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPD 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+  +CK  R+DDA  +F +ML KG   +VVTY+ ++ G F++     A ++Y 
Sbjct: 517 KVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 576

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    NI +Y+I+I+GLCK   ++EA   FH      L  D+ T  I+I    K G
Sbjct: 577 SMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGG 636

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  +AM L+ ++   G++PD      +A+ NL   GS E
Sbjct: 637 RKEDAMDLFATISAYGLVPDVETYCLIAE-NLIKEGSLE 674



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F  + D+G+ P+  TY  +I GY S+ +  E VQ+ ++++   L+P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + +L+D  CK GR  +A  +F  ++ KG K NV  Y  L+ GY    ++       +
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N +SP+   ++I+     K+ +++EA++ F       L P++VTY  LI   CK G
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLG 391

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A+  ++ M+  G+ PD  + S+L
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSL 418



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITFTILID 70
           L  ++ + G  PD+ +Y+ ++ G+C+  R +EA++L   +         PN +T+T +ID
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +D A  +F  M++KG + N  TY+CLI GY      K    + +EM  + + P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +   Y++L+D LCK G   EA   F   +   + P+V  Y IL+ GY   G  +E     
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 191 DSMLRNGIMPD 201
           D M+ NG+ PD
Sbjct: 331 DLMVGNGVSPD 341



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KL   +   GL+PD +TYNT++ GYC   R+D+A  LF ++    L P+ +T+ 
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++    + GR  +A  ++  M+    + N+ TY+ +I+G  K+  +  AF ++  +C  
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++  +I + +I+I  L K G  E+A+  F       L+PDV TY ++     K G   E 
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 676

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            +L+ +M  NG  P+  +L+ L  + L 
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLH 704



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 106/187 (56%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD   +N + C Y     +DEA+ +F+K+   +L PN +T+  LIDA CK GR+DDA
Sbjct: 337 GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDA 396

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            + F++M+++G   ++  +S L+ G       + A +++ E+ +  I  + V ++ L+  
Sbjct: 397 VLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC+ G + EA       L   + PDV++Y  L+ G+C  GR  EA +L D ++  G+ PD
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPD 516

Query: 202 GLLLSTL 208
            +  +TL
Sbjct: 517 KVTYNTL 523



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 108/185 (58%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +LF ++ D+G+  D + +NT++C  C   R+ EA +L + +  V ++P+ I++  L
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D  C  GR+D+A  +   ++  G K + VTY+ L+ GY K++ +  A+ ++ EM    +
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P++V+Y+ ++ GL + G   EA   +   +++    ++ TY I+I G CK     EA +
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608

Query: 189 LYDSM 193
           ++ S+
Sbjct: 609 MFHSL 613



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 110/186 (59%), Gaps = 1/186 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK F Q+ D G+ PDI  +++++ G C++++ ++A +LF ++    ++ +++ F  L
Sbjct: 395 DAVLK-FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C+EGR+ +A  +   ML  G + +V++Y+ L+DG+  +  +  A  + + +    +
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ V+Y+ L+ G CK   +++A   F   L   L PDVVTY  ++ G  + GR +EA +
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 189 LYDSML 194
           LY SM+
Sbjct: 574 LYLSMI 579



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 101/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +  +G++P++  Y  ++ GY +   L E     + +    + P+   F I+  
Sbjct: 291 ARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFC 350

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+  +D+A  +F KM ++    N+VTY  LID   K   +  A   + +M +  ++P
Sbjct: 351 AYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTP 410

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I  +S L+ GLC     E+A   F   LD  +  D V +  L+   C+ GR  EA +L 
Sbjct: 411 DIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLI 470

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D MLR G+ PD +  +TL D
Sbjct: 471 DLMLRVGVRPDVISYNTLVD 490



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 18/215 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +I+EC +  A             P   TY  +I  +C + RL      F  +     + N
Sbjct: 80  MIRECSIKVA-------------PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVN 126

Query: 62  -SITFTILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            ++ F+ L+   C   R+D+AT ++  +M E G   +V +YS L+ G+   +  + A ++
Sbjct: 127 DTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALEL 186

Query: 120 YEEMCEN---NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
              M ++   + +PN+V+Y+ +IDGLCK  +++ A   F   +D  + P+  TY  LI G
Sbjct: 187 LSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           Y   G+  E +Q+   M  +G+ PD  + + L DY
Sbjct: 247 YLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDY 281



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF ++  +GL PD++TYNTI+ G     R  EA +L+  +   + + N  
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+I+  CK   +D+A  MF  +  K  + ++ T + +I    K    + A D++  +
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI 648

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++ +Y ++ + L K G +EE    F    +N   P+      L+R     G  
Sbjct: 649 SAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708

Query: 184 TEA 186
             A
Sbjct: 709 NRA 711



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A K+F  L  + L+ DI T N +I       R ++A+ LF  ++   L P+
Sbjct: 597 LCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPD 656

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ++ +   KEG +++   +FS M E G   N    + L+       ++  A     
Sbjct: 657 VETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLS 716

Query: 122 EMCENNISPNIVSYSILI 139
           ++ E N S    + S+LI
Sbjct: 717 KLDEKNFSLEASTTSMLI 734



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 8/139 (5%)

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFK------SQNMKSAFDVYEEMCENNISPN 131
           ++DA  +F +ML     A+V  ++ L+    +      S+ + S F+     C   ++P+
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHL-LPDVVTYAILIRGYCKAGRPTEAMQ-L 189
             +Y+ILI   C+ G ++    AF   L     + D V ++ L++G C A R  EA   L
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              M   G  PD    S L
Sbjct: 152 LRRMPEFGCTPDVFSYSIL 170



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 51/121 (42%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A+ LF  ++  GL PD+ TY  I         L+E  +LF  +      PN
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPN 691

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S     L+      G ++ A    SK+ EK       T S LI  Y + +  + A  + E
Sbjct: 692 SRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSLPE 751

Query: 122 E 122
           +
Sbjct: 752 K 752


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 1/203 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-SLNRLDEAVQLFEKLTCVQLK 59
           +L++E H+  A+  + ++ ++G+ P +++ N +I   C +   ++ A +LF ++     +
Sbjct: 129 ILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQ 188

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+S T+  LI+  CK G++  A  +  +M EKG   +VV+Y+ LI G  +S N+  A ++
Sbjct: 189 PDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIEL 248

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EEM  N I PN+ +YS L+DGLCK G   +A+      +   LLP++VTY+ LI G CK
Sbjct: 249 LEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCK 308

Query: 180 AGRPTEAMQLYDSMLRNGIMPDG 202
            G+  EA+++ D M   G+ PD 
Sbjct: 309 EGKHREAVEILDRMRLQGLKPDA 331



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 115/201 (57%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++ D  ++P   +Y T+       N +  A+  ++++    + P  ++  ILI 
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163

Query: 71  AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           A CK E  ++ A  +F +M  +G + +  TY  LI+G  K   +  A ++ +EM E  +S
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++VSY+ LI GLC+   ++EA+      + N + P+V TY+ L+ G CK+G  ++AM+L
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+R  ++P+ +  STL +
Sbjct: 284 LEVMVRRRLLPNMVTYSTLIN 304



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 7/198 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A +L  ++ ++GL P +++Y ++I G C  N LDEA++L E++    ++PN  T++ 
Sbjct: 207 ISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSS 266

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK G    A  +   M+ +    N+VTYS LI+G  K    + A ++ + M    
Sbjct: 267 LMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQG 326

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA-------ILIRGYCKA 180
           + P+   Y  +I GLC     +EA           + P+  ++        ++++G C  
Sbjct: 327 LKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNN 386

Query: 181 GRPTEAMQLYDSMLRNGI 198
             PT A QLY SM   GI
Sbjct: 387 VDPTRAFQLYLSMRTRGI 404



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 1/190 (0%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           TI  GY  ++R  +A+++F K+   Q+KP   ++  + D   +E  +  A   + +M EK
Sbjct: 90  TICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREK 149

Query: 92  GPKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           G    VV+ + LI    K++  ++SAF ++ EM      P+  +Y  LI+GLCK G + +
Sbjct: 150 GIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQ 209

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A        +  L P VV+Y  LI G C++    EA++L + M+ NGI P+    S+L D
Sbjct: 210 AKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMD 269

Query: 211 YNLQSSGSQE 220
              +S  S +
Sbjct: 270 GLCKSGHSSQ 279



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 7/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A++L  ++   G+EP++ TY++++ G C      +A++L E +   +L PN +T++
Sbjct: 241 NLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYS 300

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CKEG+  +A  +  +M  +G K +   Y  +I G   + N + A +  +EM   
Sbjct: 301 TLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALG 360

Query: 127 NISPNIVSYS-------ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            ISPN  S++       +++ GLC       A   +       +  ++ T+  L++ +CK
Sbjct: 361 GISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCK 420

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   +A ++ + M+ +G +PD  + + L
Sbjct: 421 RGDLNKAARILEEMILDGCIPDEGMWNVL 449



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 5/212 (2%)

Query: 2   LIK-ECHLDAALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK E  ++  L +F   T+    G   D  T+  +I    S+N+   A  + E++    
Sbjct: 21  LIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQED 80

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
            +     F  +   + +  R  DA  +F KM +   K    +Y  + D   +  ++K A 
Sbjct: 81  CEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAI 140

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             Y+EM E  I P +VS +ILI  LCK    +E A   F    +    PD  TY  LI G
Sbjct: 141 GFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLING 200

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            CK G+ ++A +L D M   G+ P  +  ++L
Sbjct: 201 LCKLGKISQAKELLDEMEEKGLSPSVVSYTSL 232



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 7/157 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A+++  ++  +GL+PD   Y  II G C+     EA    +++    + PN
Sbjct: 306 LCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPN 365

Query: 62  SITFT-------ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
             ++T       +++   C       A  ++  M  +G    + T+ CL+  + K  ++ 
Sbjct: 366 RASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLN 425

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            A  + EEM  +   P+   +++L+ GL  R  + E 
Sbjct: 426 KAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRET 462


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 3/203 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITF 65
           DA   +F ++ + G  PD+ +YN +I G C   +  EA++L   +T        PN +++
Sbjct: 147 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSY 206

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + +ID F KEG +D A  +F +M+ +G   +VVTYS LIDG  K+Q M  A  + + M +
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + PN  +Y+I+I G C  G +EEA+        + L PDVVTY +LI+ YCK GR  E
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  ++DSM+R G  P+  +   L
Sbjct: 327 ARSVFDSMVRKGQKPNSTIYHIL 349



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  +   + D+G+ P+  TYN +I GYCSL +L+EAV+L +K++   L+P+
Sbjct: 248 LCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 307

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG--------------- 106
            +T+ +LI  +CK GR  +A  +F  M+ KG K N   Y  L+ G               
Sbjct: 308 VVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 367

Query: 107 --------------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                               Y K   +  A   + EM +N + P++VSYS +I  LCK G
Sbjct: 368 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIG 427

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +E+A+Y F+  +   L P+++++  LI G C  G   +  +L   M+  GI PD + ++
Sbjct: 428 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 487

Query: 207 TLAD 210
           T+ D
Sbjct: 488 TIMD 491



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A   F  +   G++P++++YNT+I GYC + ++DE+++ F+++  + L+P+
Sbjct: 493 LCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPD 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T+  L++ + K GR++DA  ++ +M  K  K   +T + ++ G F++  + +A ++Y 
Sbjct: 553 SWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +      I +Y+ ++ GLC+   ++EAL  F          DV T+ I+I    K G
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  EA  L+ +M+  G +P
Sbjct: 673 RIDEAKSLFSAMVLRGPVP 691



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 102/195 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+  F ++   GL PD+++Y+T+I   C + R+++AV  F ++    L PN I
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +FT LI   C  G       +  +M+ +G   + +  + ++D   K   +  A D ++ +
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+VSY+ LIDG C  G M+E++  F   +   L PD  TY  L+ GY K GR 
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569

Query: 184 TEAMQLYDSMLRNGI 198
            +A+ LY  M R  +
Sbjct: 570 EDALALYREMFRKDV 584



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 4/194 (2%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           G     +T N +I G C   R D+A+ + F ++  +   P+  ++  LI   C E +  +
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183

Query: 81  ATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           A  +   M   G      NVV+YS +IDG+FK   +  A+ +++EM      P++V+YS 
Sbjct: 184 ALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSS 243

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LIDGLCK   M +A        D  ++P+  TY I+IRGYC  G+  EA++L   M  +G
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 198 IMPDGLLLSTLADY 211
           + PD +    L  Y
Sbjct: 304 LQPDVVTYILLIQY 317



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 98/180 (54%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            +N +IC Y     +D+A+  F ++    L+P+ ++++ +I   CK GR++DA   F++M
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + +G   N+++++ LI G       K   ++  EM    I P+ +  + ++D LCK G +
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F   +   + P+VV+Y  LI GYC  G+  E+++ +D M+  G+ PD    + L
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNAL 559



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 11  ALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   +T  G     P++++Y+TII G+     +D+A  LF+++      P+ +T++ 
Sbjct: 184 ALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSS 243

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK   M+ A  +   M +KG   N  TY+ +I GY     ++ A  + ++M  + 
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y +LI   CK G   EA   F   +     P+   Y IL+ GY   G   +  
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 363

Query: 188 QLYDSMLRNGI 198
            L D M+R+GI
Sbjct: 364 DLLDLMIRDGI 374



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ++K F ++   GL PD  TYN ++ GY    R+++A+ L+ ++    +K  +IT  I
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 593

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    + GR+  A  ++ KM+++G +  + TY+ ++ G  ++  +  A  ++E++    
Sbjct: 594 ILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 653

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++ +++I+I+ L K G ++EA   F   +    +P V+TY+++I+   + G   E+ 
Sbjct: 654 FELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESD 713

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+ SM +NG   D  +L+ +
Sbjct: 714 DLFLSMEKNGCAADSHMLNVI 734



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 89/150 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   + AA +L+ ++ DRG +  I TYNT++ G C  + +DEA+++FE L   + + +
Sbjct: 598 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 657

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF I+I+A  K GR+D+A  +FS M+ +GP  +V+TYS +I    +   ++ + D++ 
Sbjct: 658 VWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFL 717

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M +N  + +    +++I  L ++G +  A
Sbjct: 718 SMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 74/146 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++F  L  +  E D+ T+N +I     + R+DEA  LF  +      P+ IT+++
Sbjct: 639 VDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSL 698

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I +  +EG ++++  +F  M + G  A+    + +I    +  +++ A     ++ E N
Sbjct: 699 MIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKN 758

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALY 153
            S    + ++LI  + ++   +E  +
Sbjct: 759 FSVEASTAALLIPIVSEKKYQKEVKF 784


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 118/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L   L L  ++  +GL P+++TY T+I   C    L  AV++F+++    L+PN  
Sbjct: 324 KEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNER 383

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID FC++G M++A  + S+M+  G   +VVTY+ L+ GY     ++ A  +   M
Sbjct: 384 TYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P++VSYS +I G C+   + +A       ++  +LPD VTY+ LI+G C   + 
Sbjct: 444 VERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L+  M+R G+ PD +  ++L
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSL 528



 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 118/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A+++F Q+  RGL P+  TY T+I G+C    ++EA ++  ++      P+ +
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVV 418

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  +C  GR+ +A  +   M+E+G   +VV+YS +I G+ + + +  AF + EEM
Sbjct: 419 TYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+ V+YS LI GLC +  + EA   F   +   L PD VTY  LI  YC  G  
Sbjct: 479 VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A++L+D M++ G +PD +  S L
Sbjct: 539 SKALRLHDEMVQRGFLPDNVTYSVL 563



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A+ L   +   G+  ++I+YN++I G C   R+ E  +L E++    L P+ +
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++ FCKEG +    ++ S+M+ KG   NVVTY+ LI+   K+ N+  A +++++M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ LIDG C++GLM EA       + +   P VVTY  L+ GYC  GR 
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+ +   M+  G+ PD +  ST+
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTV 458



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 114/196 (58%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  ++  +GL PD +TYNT++ G+C    L + + L  ++    L PN +T+T LI+  
Sbjct: 298 ELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCM 357

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK G +  A  +F +M  +G + N  TY+ LIDG+ +   M  A+ V  EM  +  SP++
Sbjct: 358 CKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSV 417

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y+ L+ G C  G ++EA+      ++  L PDVV+Y+ +I G+C+     +A Q+ + 
Sbjct: 418 VTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEE 477

Query: 193 MLRNGIMPDGLLLSTL 208
           M+  G++PD +  S+L
Sbjct: 478 MVEKGVLPDTVTYSSL 493



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 108/203 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+  ++   G  P ++TYN ++ GYC L R+ EAV +   +    L P+ ++++ 
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC+E  +  A  M  +M+EKG   + VTYS LI G    Q +  AFD++ EM    
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+Y+ LI+  C  G + +AL      +    LPD VTY++LI G  K  R   A 
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +     +PD +  +TL +
Sbjct: 578 RLLLKLFYEESVPDDVTYNTLIE 600



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A ++F  +   G+ P++ TYN II G  S   L++ +    K+    + PN +T+  L
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA CK+ ++ +A  +   M   G  AN+++Y+ +I+G      M    ++ EEM    +
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ V+Y+ L++G CK G + + L      +   L P+VVTY  LI   CKAG  + A++
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           ++D M   G+ P+    +TL D
Sbjct: 369 IFDQMRVRGLRPNERTYTTLID 390



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 15/202 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A ++  ++ ++G+ PD +TY+++I G C   +L EA  LF ++    L P+ +
Sbjct: 464 RERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV---- 119
           T+T LI+A+C +G +  A  +  +M+++G   + VTYS LI+G  K    K A  +    
Sbjct: 524 TYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583

Query: 120 -YEEMCENNISPNIV----------SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            YEE   ++++ N +          S   L+ G C +GLM EA   F   L  +  P+  
Sbjct: 584 FYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAA 643

Query: 169 TYAILIRGYCKAGRPTEAMQLY 190
            Y ++I G+ + G   +A  LY
Sbjct: 644 IYNLMIHGHSRGGNVHKAYNLY 665



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 15/215 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL+L  ++  RG  PD +TY+ +I G     R   A +L  KL   +  P+ +T+  
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNT 597

Query: 68  LID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
           LI+                FC +G M++A  +F  ML++  K N   Y+ +I G+ +  N
Sbjct: 598 LIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGN 657

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
           +  A+++Y E+  ++ + + V+   L+  L + G+ +E        L +  L D     +
Sbjct: 658 VHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKV 717

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           L+    K G     + +   M ++G++PDG + S+
Sbjct: 718 LVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 5/187 (2%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR-----MDDATM 83
            ++ ++     L  + +A+ L          P  +++  ++DA  +         DDA  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F  M+  G   NV TY+ +I G     +++       +M +  ISPN+V+Y+ LID  C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K+  ++EA+          +  ++++Y  +I G C  GR +E  +L + M   G++PD +
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 204 LLSTLAD 210
             +TL +
Sbjct: 314 TYNTLVN 320



 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 125 ENNISPNIVSYSILIDGLCKRGL-----MEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +  +P ++SY+ ++D L +R        ++A   F   + N + P+V TY ++IRG   
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            G   + +     M + GI P+ +  +TL D + +    +E
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKE 260


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 120/203 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  ALK+  ++ ++G   D++TYNTI+ G C    L EA +LF ++T   + P+  TFT 
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ + K+G M+ A  +F  M+++  K +VVTY+ LIDG+ K   M+   +++ +M    
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN +SY ILI+G C  G + EA   +   ++      ++T   +++GYC+AG   +A 
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +   +ML  GI+PDG+  +TL +
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLIN 751



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 127/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +++ A+ LF  +  R L+PD++TYNT+I G+C  + +++  +L+  +   ++ PN I
Sbjct: 615 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 674

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +C  G + +A  ++ +M+EKG +A ++T + ++ GY ++ N   A +    M
Sbjct: 675 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 734

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+ ++Y+ LI+G  K   M+ A    +   ++ LLPDV+TY +++ G+ + GR 
Sbjct: 735 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM 794

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA  +   M+  G+ PD    ++L + ++  +  +E
Sbjct: 795 QEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 831



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 121/205 (59%), Gaps = 5/205 (2%)

Query: 1   MLIKECHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCV 56
           +L++ C  D    A ++F ++  +G+ PD+++++ +I G  S N  LD+A++ F  +   
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNA 527

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L P+++ +TILI  FC+ G M +A  +  +MLE+G   +VVTY+ +++G  K + +  A
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +++ EM E  + P+  +++ LI+G  K G M +A+  F   +  +L PDVVTY  LI G
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 647

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
           +CK     +  +L++ M+   I P+
Sbjct: 648 FCKGSEMEKVNELWNDMISRRIYPN 672



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++        + ++G+ PD++TYNT+I  YC    L+EA +L + ++   LKP 
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 427

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK G+   A  +  +ML+ G   +  TY+ L+    ++ NM  A  +++
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++VS+S LI  L K G +++AL  F    +  L PD V Y ILI G+C+ G
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+++ D ML  G   D +  +T+
Sbjct: 548 VMSEALKVRDEMLEQGCXLDVVTYNTI 574



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A +LF ++T+RG+ PD  T+ T+I GY     +++AV LFE +    LKP+
Sbjct: 578 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPD 637

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID FCK   M+    +++ M+ +    N ++Y  LI+GY     +  AF +++
Sbjct: 638 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 697

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E      I++ + ++ G C+ G   +A       L   ++PD +TY  LI G+ K  
Sbjct: 698 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L + M  +G++PD
Sbjct: 758 NMDRAFALVNKMENSGLLPD 777



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +L+  +  R + P+ I+Y  +I GYC++  + EA +L++++     +   I
Sbjct: 650 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 709

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++  +C+ G    A    S ML KG   + +TY+ LI+G+ K +NM  AF +  +M
Sbjct: 710 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P++++Y+++++G  ++G M+EA       ++  + PD  TY  LI G+      
Sbjct: 770 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 829

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +++D ML+ G +PD
Sbjct: 830 KEAFRVHDEMLQRGFVPD 847



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 108/203 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A +L   ++ +GL+P + TYN II G C   +   A  + +++  + + P++ T+ I
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C+   M DA  +F +M  +G   ++V++S LI    K+  +  A   + +M    
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P+ V Y+ILI G C+ G+M EAL      L+     DVVTY  ++ G CK    +EA 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+  M   G+ PD    +TL +
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLIN 611



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  LK+       G+ PD  TYN ++   C  + + +A ++F+++    + P+ ++F+ 
Sbjct: 451 LDEMLKI-------GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K G +D A   F  M   G   + V Y+ LI G+ ++  M  A  V +EM E  
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ +++GLCK  ++ EA   F    +  + PD  T+  LI GY K G   +A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L++ M++  + PD +  +TL D
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLID 646



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 105/206 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   L    + F  L  +GL   I   N+++ G   +  +D A ++++++    ++ N 
Sbjct: 299 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 358

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+I+A CK  ++++     S M EKG   +VVTY+ LI+ Y +   ++ AF++ + 
Sbjct: 359 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 418

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P + +Y+ +I+GLCK G    A       L   + PD  TY IL+   C+   
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 478

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A +++D M   G++PD +  S L
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSAL 504



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++ ++  Y    +L E  + F  L    L  +      L+    K G +D A  ++ +
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ++  G + NV T + +I+   K+Q +++      +M E  + P++V+Y+ LI+  C++GL
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +EEA           L P V TY  +I G CK G+   A  + D ML+ G+ PD
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + F +L+  + +  ++ +    F  +  KG   ++   + L+ G  K   +  A+++Y
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +E+  + +  N+ + +I+I+ LCK   +E          +  + PDVVTY  LI  YC+ 
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G   EA +L DSM   G+ P
Sbjct: 407 GLLEEAFELMDSMSGKGLKP 426



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE ++D A  L  ++ + GL PD+ITYN I+ G+    R+ EA  +  K+    + P+
Sbjct: 753 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPD 812

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T LI+    +  + +A  +  +ML++G
Sbjct: 813 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/173 (17%), Positives = 70/173 (40%), Gaps = 17/173 (9%)

Query: 55  CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-----------------KANV 97
           C   K +  +F+ +I    +  R+ DA  +  +M+ K                    +N 
Sbjct: 229 CPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNP 288

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           + +  L+  Y +++ ++   + +  +    +  +I + + L+ GL K G ++ A   +  
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + + +  +V T  I+I   CK  +          M   G+ PD +  +TL +
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 401


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITY+++I G+C  NRLD A  +F  +      PN
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LID +C   R+DD   +  +M E G  A+  TY+ LI G++   ++ +A D+ +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           EM  + + P+IV+   L+DGLC  G +++AL  F         LD     N + PDV TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ ++G+ PD+ TYN++I G+CS  R  +A QL +++   ++ P+ +T+ 
Sbjct: 271 HSDAQ-NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+AF KEG+  +A  ++ +ML +G   N +TYS +IDG+ K   + +A  ++  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN+++++ LIDG C    +++ +   H   +  L+ D  TY  LI G+   G    A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M+ +G+ PD +   TL D
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLD 473



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++T+ GL  D  TYNT+I G+  +  L+ A+ L +++    L P+ +T  
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V TY+ LI G         
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCKAGR  + ++L+  M R GI+ + +   TL
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 1/207 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF Q+ +    P+++T+ T++ G C   R+ EAV L +++    L+P  IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  ++D  CK+G    A  +  KM E      NVV YS +ID   K      A +++ EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ +Y+ +I G C  G   +A       L+  + PDVVTY  LI  + K G+ 
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +LYD ML  GI+P+ +  S++ D
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMID 368



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P  ITY TI+ G C       A+ L  K+  V  + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID+ CK+GR  DA  +F++M EKG   ++ TY+ +I G+  S     A  + 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISP++V+Y+ LI+   K G   EA   +   L   ++P+ +TY+ +I G+CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  P+ +  +TL D
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+DD   +F +M  +G  AN +TY  LI G+ K  N+  A D+++
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  ++ A+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAV 671



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 89/155 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K G +  AL  F   + + + PD +T   ++ G
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P ++ +  ++     + R D  + L++K+   Q++ +  +FTI
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A +++ +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P  +TY  ++ G CK G    A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ S + D
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIID 263



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ + F  L+    +  R D    ++ KM  K  + 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H   +    P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P  +   T+ D
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+ T+I GYC   R+D+ ++LF ++    +  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++ G +  + +K A  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 122 EM 123
           ++
Sbjct: 676 KL 677


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITY+++I G+C  NRLD A  +F  +      PN
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LID +C   R+DD   +  +M E G  A+  TY+ LI G++   ++ +A D+ +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           EM  + + P+IV+   L+DGLC  G +++AL  F         LD     N + PDV TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ ++G+ PD+ TYN++I G+CS  R  +A QL +++   ++ P+ +T+ 
Sbjct: 271 HSDAQ-NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+AF KEG+  +A  ++ +ML +G   N +TYS +IDG+ K   + +A  ++  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN+++++ LIDG C    +++ +   H   +  L+ D  TY  LI G+   G    A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M+ +G+ PD +   TL D
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLD 473



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++T+ GL  D  TYNT+I G+  +  L+ A+ L +++    L P+ +T  
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V TY+ LI G         
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCKAGR  + ++L+  M R GI+ + +   TL
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 1/207 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF Q+ +    P+++T+ T++ G C   R+ EAV L +++    L+P  IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  ++D  CK+G    A  +  KM E      NVV YS +ID   K      A +++ EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ +Y+ +I G C  G   +A       L+  + PDVVTY  LI  + K G+ 
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +LYD ML  GI+P+ +  S++ D
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMID 368



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P  ITY TI+ G C       A+ L  K+  V  + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID+ CK+GR  DA  +F++M EKG   ++ TY+ +I G+  S     A  + 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISP++V+Y+ LI+   K G   EA   +   L   ++P+ +TY+ +I G+CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  P+ +  +TL D
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+DD   +F +M  +G  AN +TY  LI G+ K  N+  A D+++
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  ++ A+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAV 671



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 89/155 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K G +  AL  F   + + + PD +T   ++ G
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P ++ +  ++     + R D  + L++K+   Q++ +  +FTI
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A +++ +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P  +TY  ++ G CK G    A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ S + D
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIID 263



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ + F  L+    +  R D    ++ KM  K  + 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H   +    P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P  +   T+ D
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+ T+I GYC   R+D+ ++LF ++    +  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++ G +  + +K A  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 122 EM 123
           ++
Sbjct: 676 KL 677


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITY+++I G+C  NRLD A  +F  +      PN
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LID +C   R+DD   +  +M E G  A+  TY+ LI G++   ++ +A D+ +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           EM  + + P+IV+   L+DGLC  G +++AL  F         LD     N + PDV TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ ++G+ PD+ TYN++I G+CS  R  +A QL +++   ++ P+ +T+ 
Sbjct: 271 HSDAQ-NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+AF KEG+  +A  ++ +ML +G   N +TYS +IDG+ K   + +A  ++  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN+++++ LIDG C    +++ +   H   +  L+ D  TY  LI G+   G    A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M+ +G+ PD +   TL D
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLD 473



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++T+ GL  D  TYNT+I G+  +  L+ A+ L +++    L P+ +T  
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V TY+ LI G         
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCKAGR  + ++L+  M R GI+ + +   TL
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 1/207 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF Q+ +    P+++T+ T++ G C   R+ EAV L +++    L+P  IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  ++D  CK+G    A  +  KM E      NVV YS +ID   K      A +++ EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ +Y+ +I G C  G   +A       L+  + PDVVTY  LI  + K G+ 
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +LYD ML  GI+P+ +  S++ D
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMID 368



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P  ITY TI+ G C       A+ L  K+  V  + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID+ CK+GR  DA  +F++M EKG   ++ TY+ +I G+  S     A  + 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISP++V+Y+ LI+   K G   EA   +   L   ++P+ +TY+ +I G+CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  P+ +  +TL D
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+DD   +F +M  +G  AN +TY  LI G+ K  N+  A D+++
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  ++ A+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAV 671



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 89/155 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K G +  AL  F   + + + PD +T   ++ G
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P ++ +  ++     + R D  + L++K+   Q++ +  +F I
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A +++ +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P  +TY  ++ G CK G    A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ S + D
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIID 263



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ + F  L+    +  R D    ++ KM  K  + 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H   +    P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P  +   T+ D
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+ T+I GYC   R+D+ ++LF ++    +  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++ G +  + +K A  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 122 EM 123
           ++
Sbjct: 676 KL 677


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITY+++I G+C  NRLD A  +F  +      PN
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LID +C   R+DD   +  +M E G  A+  TY+ LI G++   ++ +A D+ +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           EM  + + P+IV+   L+DGLC  G +++AL  F         LD     N + PDV TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ ++G+ PD+ TYN++I G+CS  R  +A QL +++   ++ P+ +T+ 
Sbjct: 271 HSDAQ-NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+AF KEG+  +A  ++ +ML +G   N +TYS +IDG+ K   + +A  ++  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN+++++ LIDG C    +++ +   H   +  L+ D  TY  LI G+   G    A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M+ +G+ PD +   TL D
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLD 473



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++T+ GL  D  TYNT+I G+  +  L+ A+ L +++    L P+ +T  
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V TY+ LI G         
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCKAGR  + ++L+  M R GI+ + +   TL
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 1/207 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL  F Q+ +    P+++T+ T++ G C   R+ EAV L +++    L+P  IT
Sbjct: 162 EDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  ++D  CK+G    A  +  KM E      NVV YS +ID   K      A +++ EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ +Y+ +I G C  G   +A       L+  + PDVVTY  LI  + K G+ 
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +LYD ML  GI+P+ +  S++ D
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMID 368



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P  ITY TI+ G C       A+ L  K+  V  + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID+ CK+GR  DA  +F++M EKG   ++ TY+ +I G+  S     A  + 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISP++V+Y+ LI+   K G   EA   +   L   ++P+ +TY+ +I G+CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  P+ +  +TL D
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+DD   +F +M  +G  AN +TY  LI G+ K  N+  A D+++
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  ++ A+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAV 671



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 89/155 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K G +  AL  F   + + + PD +T   ++ G
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P ++ +  ++     + R D  + L++K+   Q++ +  +F I
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A D + +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P  +TY  ++ G CK G    A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ S + D
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIID 263



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ + F  L+    +  R D    ++ KM  K  + 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H   +    P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P  +   T+ D
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+ T+I GYC   R+D+ ++LF ++    +  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++ G +  + +K A  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 122 EM 123
           ++
Sbjct: 676 KL 677


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITY+++I G+C  NRLD A  +F  +      PN
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LID +C   R+DD   +  +M E G  A+  TY+ LI G++   ++ +A D+ +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           EM  + + P+IV+   L+DGLC  G +++AL  F         LD     N + PDV TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ ++G+ PD+ TYN++I G+CS  R  +A QL +++   ++ P+ +T+ 
Sbjct: 271 HSDAQ-NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+AF KEG+  +A  ++ +ML +G   N +TYS +IDG+ K   + +A  ++  M   
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN+++++ LIDG C    +++ +   H   +  L+ D  TY  LI G+   G    A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M+ +G+ PD +   TL D
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLD 473



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++T+ GL  D  TYNT+I G+  +  L+ A+ L +++    L P+ +T  
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V TY+ LI G         
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCKAGR  + ++L+  M R GI+ + +   TL
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P  ITY TI+ G C +     A+ L  K+  +  + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID+ CK+GR  DA  +F++M EKG   ++ TY+ +I G+  S     A  + 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISP++V+Y+ LI+   K G   EA   +   L   ++P+ +TY+ +I G+CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  P+ +  +TL D
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLID 403



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 1/207 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF Q+ +    P+++T+ T++ G C   R+ EAV L +++    L+P  IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  ++D  CK G    A  +  KM E      NVV YS +ID   K      A +++ EM
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ +Y+ +I G C  G   +A       L+  + PDVVTY  LI  + K G+ 
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +LYD ML  GI+P+ +  S++ D
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMID 368



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F+ +      PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+DD   +F +M  +G  AN +TY  LI G+ K  N+  A D+++
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  ++ A+
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAV 671



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 89/155 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K G +  AL  F   + + + PD +T   ++ G
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P ++ +  ++     + R D  + L++K+   Q++ +  +FTI
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A +++ +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P  +TY  ++ G CK G    A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ S + D
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIID 263



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ + F  L+    +  R D    ++ KM  K  + 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H   +    P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P  +   T+ D
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+ T+I GYC   R+D+ ++LF ++    +  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++ G +  + +K A  + E
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLE 675

Query: 122 EM 123
           ++
Sbjct: 676 KL 677


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 118/200 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A   + ++  RG+ P++ITY T+I G+C   +L  A  L  ++    + PN
Sbjct: 202 LCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILIDA CKEG++ +A  + ++M  +G  A+VVTY+ L+DG+ K+QN+  A  ++ 
Sbjct: 262 VYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFM 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I PN  +Y+ LIDGLCK G +++A   F   L      DV TY ++I G CK G
Sbjct: 322 KMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEG 381

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              EA+ +   M  NG +P+
Sbjct: 382 MLDEALAIKSKMEDNGCIPN 401



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 113/210 (53%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H   A+ L  Q+  +G+EP+++T N +I  +C L ++  +  +  K+  +  +PN
Sbjct: 62  LAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPN 121

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT T L+   C +G +  +     K++ +G + N V+Y  L++G  K    + A     
Sbjct: 122 TITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLR 181

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKA 180
            + +++   N+V Y+ +IDGLCK  L+ EA Y F+  ++   + P+V+TY  LI G+C A
Sbjct: 182 MIEDSSTGLNVVMYNTIIDGLCKDKLVNEA-YDFYSEMNARGIFPNVITYTTLIGGFCLA 240

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+ T A  L + M+   I P+    + L D
Sbjct: 241 GQLTGAFSLLNEMILKNINPNVYTYAILID 270



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 5/209 (2%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  + G++   G +P+ IT  T++ G C    + ++V   +K+     + N 
Sbjct: 98  CHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQ 157

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +++  L++  CK G    A + F +M+E      NVV Y+ +IDG  K + +  A+D Y 
Sbjct: 158 VSYGTLLNGLCKIGETRCA-IKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYS 216

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I PN+++Y+ LI G C  G +  A    +  +  ++ P+V TYAILI   CK G
Sbjct: 217 EMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEG 276

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L   M   G   D +  ++L D
Sbjct: 277 KVKEAKNLLAEMHYRGQPADVVTYTSLLD 305



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 87/163 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  L  ++  RG   D++TY +++ G+C    LD+A  LF K+    ++PN
Sbjct: 272 LCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPN 331

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID  CK GR+ DA  +F  +L KG   +V TY+ +I G  K   +  A  +  
Sbjct: 332 KYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKS 391

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           +M +N   PN+V++ I+I  L K+   ++A    H  +   LL
Sbjct: 392 KMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F  +      P I+ +  I+     +     A+ L +++    ++PN +T  I
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC  G+M  +  +  K+L+ G + N +T + L+ G      ++ +   ++++    
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N VSY  L++GLCK G    A+       D+    +VV Y  +I G CK     EA 
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             Y  M   GI P+ +  +TL
Sbjct: 213 DFYSEMNARGIFPNVITYTTL 233



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 70/149 (46%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           N +D+A+  F  +  +   P  + F  ++    K      A  +  +M  KG + N+VT 
Sbjct: 31  NVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTL 90

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + LI+ +     M  +F V  ++ +    PN ++ + L+ GLC +G ++++++     + 
Sbjct: 91  NILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVA 150

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
                + V+Y  L+ G CK G    A++ 
Sbjct: 151 QGFQMNQVSYGTLLNGLCKIGETRCAIKF 179


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 119/208 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A +  G +   G +P++++YNTII GY S   ++ A ++ + +    ++P
Sbjct: 258 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP 317

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S T+  LI   CKEGR+++A+ +F KM+E G   N VTY+ LIDGY    +++ AF   
Sbjct: 318 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 377

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P++ +Y++L+  L   G M EA           ++PD +TY ILI GY + 
Sbjct: 378 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 437

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   +A  L++ ML  GI P  +  ++L
Sbjct: 438 GNAKKAFDLHNEMLSKGIEPTHVTYTSL 465



 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  LF ++ + GL P+ +TYNT+I GYC+   L+ A    +++    + P+  
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 390

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+ A   EGRM +A  M  +M +KG   + +TY+ LI+GY +  N K AFD++ EM
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P  V+Y+ LI  L +R  M+EA   F   LD  + PDV+ +  ++ G+C  G  
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  L   M R  + PD +  +TL
Sbjct: 511 ERAFMLLKEMDRKSVPPDEVTFNTL 535



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +L++ C      D A K F  + ++G+ P I T N ++  +  LNR++ A  L+ ++  +
Sbjct: 184 LLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRL 243

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++     TF I+++  CKEG++  A      M   G K NVV+Y+ +I GY    N++ A
Sbjct: 244 RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 303

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + M    I P+  +Y  LI G+CK G +EEA   F   ++  L+P+ VTY  LI G
Sbjct: 304 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 363

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           YC  G    A    D M++ GIMP      +++ YNL
Sbjct: 364 YCNKGDLERAFSYRDEMVKKGIMP------SVSTYNL 394



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +  ++  +G+ PD ITYN +I GY       +A  L  ++    ++P 
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    +  RM +A  +F K+L++G   +V+ ++ ++DG+  + N++ AF + +
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ V+++ L+ G C+ G +EEA           + PD ++Y  LI GY + G
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A ++ D ML  G  P      TL  YN
Sbjct: 579 DIKDAFRVRDEMLSIGFNP------TLLTYN 603



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 99/176 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   +  A  LF ++ D+G+ PD+I +N ++ G+C+   ++ A  L +++    + P
Sbjct: 468 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 527

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  L+   C+EG++++A M+  +M  +G K + ++Y+ LI GY +  ++K AF V 
Sbjct: 528 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 587

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           +EM     +P +++Y+ LI  LCK    + A       ++  + PD  TY  LI G
Sbjct: 588 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 96/191 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +G+EP  +TY ++I      NR+ EA  LFEK+    + P+ I F  ++D
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G ++ A M+  +M  K    + VT++ L+ G  +   ++ A  + +EM    I P
Sbjct: 503 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 562

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + +SY+ LI G  +RG +++A       L     P ++TY  LI+  CK      A +L 
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622

Query: 191 DSMLRNGIMPD 201
             M+  GI PD
Sbjct: 623 KEMVNKGISPD 633



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 3/201 (1%)

Query: 13  KLFGQLT---DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +LF +LT   DR      I ++ ++   C L R DEA + F  +    + P   T   ++
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 221

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K  RM+ A +++++M      + V T++ +++   K   +K A +    M      
Sbjct: 222 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 281

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+VSY+ +I G   RG +E A           + PD  TY  LI G CK GR  EA  L
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +D M+  G++P+ +  +TL D
Sbjct: 342 FDKMVEIGLVPNAVTYNTLID 362



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 76/136 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L  ++  + + PD +T+NT++ G C   +++EA  L +++    +KP+ I++ 
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  + + G + DA  +  +ML  G    ++TY+ LI    K+Q    A ++ +EM   
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628

Query: 127 NISPNIVSYSILIDGL 142
            ISP+  +Y  LI+G+
Sbjct: 629 GISPDDSTYLSLIEGM 644


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 123/209 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L+ ++  RG+ PD ITY T+I G+C L +L  A  L +++    + P 
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPG 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ILI+A CKEG + +A  + + M ++G K  VVTYS L+DGY     +++A  ++ 
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  ++PN+ SY+I+I+GLCK   ++EA+      L  +++PD VTY  LI G CK+G
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R T A+ L + M   G   D +  ++L D
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLD 368



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 110/193 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +   G+ P++ +YN +I G C   R+DEA+ L  ++    + P+++T+  LID
Sbjct: 274 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 333

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+  A  + ++M  +G  A+VVTY+ L+D   K+QN+  A  ++ +M E  I P
Sbjct: 334 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + +Y+ LIDGLCK G ++ A   F   L      DV TY ++I G CK G   EA+ + 
Sbjct: 394 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 453

Query: 191 DSMLRNGIMPDGL 203
             M  NG +P+ +
Sbjct: 454 SKMEDNGCIPNAV 466



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 109/200 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL   + DR   P+++ YNTII G C    ++EA  L+ ++    + P++IT+T LI 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  G++  A  +  +M+ K     V  Y+ LI+   K  N+K A ++   M +  I P
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +V+YS L+DG C  G ++ A   FH  +   + P+V +Y I+I G CK  R  EAM L 
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             ML   ++PD +  ++L D
Sbjct: 314 REMLHKNMVPDTVTYNSLID 333



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 108/193 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ L  ++  + + PD +TYN++I G C   R+  A+ L  ++       + +T+T
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+DA CK   +D AT +F KM E+G +  + TY+ LIDG  K   +K+A ++++ +   
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               ++ +Y+++I GLCK G+ +EAL       DN  +P+ VT+ I+IR   +     +A
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 484

Query: 187 MQLYDSMLRNGIM 199
            +L   M+  G++
Sbjct: 485 EKLLHEMIAKGLL 497



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +L    ++  +G + D ++Y T++ G C +     AV+L   +     +PN + +  +ID
Sbjct: 99  SLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIID 158

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+  +++A  ++S+M  +G   + +TY+ LI G+     +  AF + +EM   NI+P
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP 218

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +  Y+ILI+ LCK G ++EA           + P VVTY+ L+ GYC  G    A Q++
Sbjct: 219 GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIF 278

Query: 191 DSMLRNGIMPD 201
            +M++ G+ P+
Sbjct: 279 HAMVQMGVNPN 289



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  + G++   G +PD IT NT++ G C    + +++   +K+     + + 
Sbjct: 56  CHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDH 115

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  L++  CK G    A  +   + ++  + NVV Y+ +IDG  K + +  A+D+Y E
Sbjct: 116 VSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE 175

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P+ ++Y+ LI G C  G +  A       +  ++ P V  Y ILI   CK G 
Sbjct: 176 MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN 235

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L   M + GI P  +  STL D
Sbjct: 236 VKEAKNLLAVMTKEGIKPGVVTYSTLMD 263



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 2/192 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A+ L  Q+  +G+  + +T N +I  +C L ++  +  +  K+  +  +P++IT   L+
Sbjct: 28  TAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLM 87

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C +G +  +     K++ +G + + V+Y  L++G  K    + A  +   + + +  
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTR 147

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQ 188
           PN+V Y+ +IDGLCK  L+ EA Y  +  +D   + PD +TY  LI G+C  G+   A  
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEA-YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206

Query: 189 LYDSMLRNGIMP 200
           L D M+   I P
Sbjct: 207 LLDEMILKNINP 218



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P II +N I+     + +   A+ L +++    ++ N +T  ILI+ FC  G+M  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             K+L+ G + + +T + L+ G      +K +   ++++       + VSY  L++GLCK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G    A+       D    P+VV Y  +I G CK     EA  LY  M   GI PD + 
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 205 LSTL 208
            +TL
Sbjct: 188 YTTL 191



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 75/155 (48%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           V+  P  I F  ++ +  K  +   A  +  +M  KG +AN VT + LI+ +     M  
Sbjct: 4   VRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAF 63

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           +F V  ++ +    P+ ++ + L+ GLC +G ++++L+     +      D V+Y  L+ 
Sbjct: 64  SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G CK G    A++L   +      P+ ++ +T+ D
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIID 158


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 119/208 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A +  G +   G +P++++YNTII GY S   ++ A ++ + +    ++P
Sbjct: 236 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP 295

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S T+  LI   CKEGR+++A+ +F KM+E G   N VTY+ LIDGY    +++ AF   
Sbjct: 296 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P++ +Y++L+  L   G M EA           ++PD +TY ILI GY + 
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 415

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   +A  L++ ML  GI P  +  ++L
Sbjct: 416 GNAKKAFDLHNEMLSKGIEPTHVTYTSL 443



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  LF ++ + GL P+ +TYNT+I GYC+   L+ A    +++    + P+  
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 368

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+ A   EGRM +A  M  +M +KG   + +TY+ LI+GY +  N K AFD++ EM
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P  V+Y+ LI  L +R  M+EA   F   LD  + PDV+ +  ++ G+C  G  
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  L   M R  + PD +  +TL
Sbjct: 489 ERAFMLLKEMDRKSVPPDEVTFNTL 513



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +L++ C      D A K F  + ++G+ P I T N ++  +  LNR++ A  L+ ++  +
Sbjct: 162 LLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRL 221

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++     TF I+++  CKEG++  A      M   G K NVV+Y+ +I GY    N++ A
Sbjct: 222 RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 281

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + M    I P+  +Y  LI G+CK G +EEA   F   ++  L+P+ VTY  LI G
Sbjct: 282 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 341

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           YC  G    A    D M++ GIMP      +++ YNL
Sbjct: 342 YCNKGDLERAFSYRDEMVKKGIMP------SVSTYNL 372



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +  ++  +G+ PD ITYN +I GY       +A  L  ++    ++P 
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    +  RM +A  +F K+L++G   +V+ ++ ++DG+  + N++ AF + +
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ V+++ L+ G C+ G +EEA           + PD ++Y  LI GY + G
Sbjct: 497 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 556

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A ++ D ML  G  P      TL  YN
Sbjct: 557 DIKDAFRVRDEMLSIGFNP------TLLTYN 581



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 99/176 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   +  A  LF ++ D+G+ PD+I +N ++ G+C+   ++ A  L +++    + P
Sbjct: 446 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 505

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  L+   C+EG++++A M+  +M  +G K + ++Y+ LI GY +  ++K AF V 
Sbjct: 506 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 565

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           +EM     +P +++Y+ LI  LCK    + A       ++  + PD  TY  LI G
Sbjct: 566 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 96/191 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +G+EP  +TY ++I      NR+ EA  LFEK+    + P+ I F  ++D
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G ++ A M+  +M  K    + VT++ L+ G  +   ++ A  + +EM    I P
Sbjct: 481 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 540

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + +SY+ LI G  +RG +++A       L     P ++TY  LI+  CK      A +L 
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600

Query: 191 DSMLRNGIMPD 201
             M+  GI PD
Sbjct: 601 KEMVNKGISPD 611



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 3/201 (1%)

Query: 13  KLFGQLT---DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +LF +LT   DR      I ++ ++   C L R DEA + F  +    + P   T   ++
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 199

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K  RM+ A +++++M      + V T++ +++   K   +K A +    M      
Sbjct: 200 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 259

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+VSY+ +I G   RG +E A           + PD  TY  LI G CK GR  EA  L
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +D M+  G++P+ +  +TL D
Sbjct: 320 FDKMVEIGLVPNAVTYNTLID 340



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 76/136 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L  ++  + + PD +T+NT++ G C   +++EA  L +++    +KP+ I++ 
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  + + G + DA  +  +ML  G    ++TY+ LI    K+Q    A ++ +EM   
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606

Query: 127 NISPNIVSYSILIDGL 142
            ISP+  +Y  LI+G+
Sbjct: 607 GISPDDSTYLSLIEGM 622


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 1/213 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A++   Q+ DRGL P+  TY T+I G+     L +A Q+ +++      P  I
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  C  GRM+DA+ +  +M+E+G   +VV+YS +I G+ ++Q ++ AF +  EM
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISP++ +YS LI GLCK+  + E    F   L   L PD VTY  LI  YC  G  
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 215
            +A++L+D M++ G  PD +  + L + +N QS
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +    ++  +++ R   PD +T+NT+I GYC++    +A+ L  ++    L PN
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI++ CK G ++ A     +M ++G   N  TY+ LIDG+ +   +K A+ + +
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM EN  +P I++Y+ LI+G C  G ME+A       ++   +PDVV+Y+ +I G+C+  
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A QL   M+  GI PD    S+L
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSL 489



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 119/217 (54%), Gaps = 9/217 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+  L  FG++   G  P+++TYNTII  YC L ++ EA +L   +    L PN I++ 
Sbjct: 218 NLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYN 277

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+  C+EG+M + + +  +M ++    + VT++ LI+GY    N   A  ++ EM +N
Sbjct: 278 VVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SPN+V+Y+ LI+ +CK G +  A+       D  L P+  TY  LI G+ + G   +A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            Q+   M+ NG  P      T+  YN   +G   HCI
Sbjct: 398 YQIMKEMVENGFTP------TIITYNALING---HCI 425



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 112/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +GL P++I+YN +I G C   ++ E  ++ E+++  +  P+ +TF  LI+
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G    A ++ ++M++ G   NVVTY+ LI+   K+ N+  A +  ++M +  + P
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+ LIDG  ++G +++A       ++N   P ++TY  LI G+C  GR  +A  L 
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  G +PD +  ST+
Sbjct: 437 QEMIERGFIPDVVSYSTI 454



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++ + G+ P++ TYN +I G+C+   L+  +  F ++      PN +T+  +IDA+C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  ++ +A  +   M  KG   N+++Y+ +I+G  +   MK   ++ EEM +    P+ V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LI+G C  G   +AL      + N L P+VVTY  LI   CKAG    AM+  D M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 194 LRNGIMPDGLLLSTLAD 210
              G+ P+G   +TL D
Sbjct: 370 RDRGLHPNGRTYTTLID 386



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  L  A ++  ++ + G  P IITYN +I G+C L R+++A  L +++      P+ +
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ +I  FC+   ++ A  +  +M+ KG   +V TYS LI G  K + +    D+++EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V+Y+ LI+  C  G +++AL      +     PD+VTY +LI G+ K  R 
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L   +L    +P+ +  +TL D
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLID 596



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 15/211 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD AL+L  ++  +G  PDI+TYN +I G+   +R  EA +L  KL   +  PN IT
Sbjct: 531 EGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEIT 590

Query: 65  FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           +  LID                FC +G M++A  +   ML+KG K N   Y+ +I G+ K
Sbjct: 591 YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSK 650

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
             N++ A+++Y+EM  +  +P+ V+   L   L   G   E        L +  + +   
Sbjct: 651 VGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAAL 710

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +LI    K G       +   M  +G++P
Sbjct: 711 AKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 20/208 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L     LF ++   GL PD +TY ++I  YC    LD+A++L +++      P+
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LI+ F K+ R  +A  +  K+L +    N +TY+ LID                
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN--------------- 597

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             C N       S   L+ G C +GLM EA       L      +   Y ++I G+ K G
Sbjct: 598 --CNN---LEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              +A  LY  ML +G  P  + +  LA
Sbjct: 653 NIEKAYNLYKEMLHSGFAPHSVTIMALA 680



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 10/182 (5%)

Query: 40  LNRLDEAVQ-LFE--KLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           +N +DE  + LF+  K +  Q K +S  F +++ +  +   ++ A  + +     G    
Sbjct: 107 VNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPG 166

Query: 97  VVTYSCLIDGYFKS-QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           V++Y+ ++D   ++ Q++K A  +++EM E+ +SPN+ +Y+ILI G C  G +E  L+ F
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFF 226

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
                N  LP+VVTY  +I  YCK  +  EA +L   M   G+ P+      L  YN+  
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPN------LISYNVVI 280

Query: 216 SG 217
           +G
Sbjct: 281 NG 282


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 1/213 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A++   Q+ DRGL P+  TY T+I G+     L +A Q+ +++      P  I
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  C  GRM+DA+ +  +M+E+G   +VV+YS +I G+ ++Q ++ AF +  EM
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISP++ +YS LI GLCK+  + E    F   L   L PD VTY  LI  YC  G  
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 215
            +A++L+D M++ G  PD +  + L + +N QS
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +    ++  +++ R   PD +T+NT+I GYC++    +A+ L  ++    L PN
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI++ CK G ++ A     +M ++G   N  TY+ LIDG+ +   +K A+ + +
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM EN  +P I++Y+ LI+G C  G ME+A       ++   +PDVV+Y+ +I G+C+  
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A QL   M+  GI PD    S+L
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSL 489



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 119/217 (54%), Gaps = 9/217 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+  L  FG++   G  P+++TYNTII  YC L ++ EA +L   +    L PN I++ 
Sbjct: 218 NLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYN 277

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+  C+EG+M + + +  +M ++    + VT++ LI+GY    N   A  ++ EM +N
Sbjct: 278 VVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SPN+V+Y+ LI+ +CK G +  A+       D  L P+  TY  LI G+ + G   +A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            Q+   M+ NG  P      T+  YN   +G   HCI
Sbjct: 398 YQIMKEMVENGFTP------TIITYNALING---HCI 425



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 112/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +GL P++I+YN +I G C   ++ E  ++ E+++  +  P+ +TF  LI+
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G    A ++ ++M++ G   NVVTY+ LI+   K+ N+  A +  ++M +  + P
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+ LIDG  ++G +++A       ++N   P ++TY  LI G+C  GR  +A  L 
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  G +PD +  ST+
Sbjct: 437 QEMIERGFIPDVVSYSTI 454



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++ + G+ P++ TYN +I G+C+   L+  +  F ++      PN +T+  +IDA+C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  ++ +A  +   M  KG   N+++Y+ +I+G  +   MK   ++ EEM +    P+ V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LI+G C  G   +AL      + N L P+VVTY  LI   CKAG    AM+  D M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 194 LRNGIMPDGLLLSTLAD 210
              G+ P+G   +TL D
Sbjct: 370 RDRGLHPNGRTYTTLID 386



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  L  A ++  ++ + G  P IITYN +I G+C L R+++A  L +++      P+ +
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ +I  FC+   ++ A  +  +M+ KG   +V TYS LI G  K + +    D+++EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V+Y+ LI+  C  G +++AL      +     PD+VTY +LI G+ K  R 
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L   +L    +P+ +  +TL D
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLID 596



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 15/211 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD AL+L  ++  +G  PDI+TYN +I G+   +R  EA +L  KL   +  PN IT
Sbjct: 531 EGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEIT 590

Query: 65  FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           +  LID                FC +G M++A  +   ML+KG K N   Y+ +I G+ K
Sbjct: 591 YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSK 650

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
             N++ A+++Y+EM  +  +P+ V+   L   L   G   E        L +  + +   
Sbjct: 651 VGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAAL 710

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +LI    K G       +   M  +G++P
Sbjct: 711 AKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 20/208 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L     LF ++   GL PD +TY ++I  YC    LD+A++L +++      P+
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LI+ F K+ R  +A  +  K+L +    N +TY+ LID                
Sbjct: 553 IVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN--------------- 597

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             C N       S   L+ G C +GLM EA       L      +   Y ++I G+ K G
Sbjct: 598 --CNN---LEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVG 652

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              +A  LY  ML +G  P  + +  LA
Sbjct: 653 NIEKAYNLYKEMLHSGFAPHSVTIMALA 680



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 40  LNRLDEAVQ-LFE--KLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           +N +DE  + LF+  K +  Q K +S  F +++ +  +   ++ A  + +     G    
Sbjct: 107 VNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPG 166

Query: 97  VVTYSCLIDGYFKS-QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           V++Y+ ++D   ++ Q++K A  +++EM E+ +SPN+ +Y+ILI G C  G +E  L  F
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFF 226

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
                N  LP+VVTY  +I  YCK  +  EA +L   M   G+ P+      L  YN+  
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPN------LISYNVVI 280

Query: 216 SG 217
           +G
Sbjct: 281 NG 282


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 120/208 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ + +LF Q+ + GL PD++TYN++I GY  +  L+E   LF ++  V   P+
Sbjct: 240 LCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPD 299

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+ +CK  +M  A   FS+M   G K NVVTYS LID + K   M+ A  +  
Sbjct: 300 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLX 359

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN  +Y+ LID  CK G + EA    +  L   +  ++VTY  L+ G CKAG
Sbjct: 360 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 419

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           R  EA +++ SML++GI P+  + + L 
Sbjct: 420 RMIEAEEVFRSMLKDGISPNQQVYTALV 447



 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 110/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+    LF ++ D G  PDIITYN +I  YC   ++  A + F ++    LKPN +T++ 
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAFCKEG M  A  +   M   G   N  TY+ LID   K+ N+  A+ +  +M +  
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NIV+Y+ L+DGLCK G M EA   F   L + + P+   Y  L+ GY KA R  +AM
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++   M    I PD +L  ++
Sbjct: 461 KILKQMTECNIKPDLILYGSI 481



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 111/198 (56%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K F  +   G+ P + TYN +I   C    L+ + +LF ++  + L P+ +T+  LID +
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G +++   +F++M + G   +++TY+ LI+ Y K + M  AF+ + EM  N + PN+
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+YS LID  CK G+M+ A+          LLP+  TY  LI   CKAG  TEA +L + 
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 193 MLRNGIMPDGLLLSTLAD 210
           ML+ G+  + +  + L D
Sbjct: 396 MLQAGVKLNIVTYTALLD 413



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 116/210 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A + F ++ + GL+P+++TY+T+I  +C    +  A++L   +    L PN  T+T LID
Sbjct: 319 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLID 378

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G + +A  + + ML+ G K N+VTY+ L+DG  K+  M  A +V+  M ++ ISP
Sbjct: 379 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 438

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N   Y+ L+ G  K   ME+A+       + ++ PD++ Y  +I G+C   +  E   + 
Sbjct: 439 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL 498

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + M   GI  + ++ +T+ D   ++  S +
Sbjct: 499 EEMKSRGISANPVISTTIIDAYFKAGKSSD 528



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 116/222 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++F  +   G+ P+   Y  ++ GY    R+++A+++ +++T   +KP+
Sbjct: 415 LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 474

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +  +I   C + ++++  ++  +M  +G  AN V  + +ID YFK+     A + ++
Sbjct: 475 LILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQ 534

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +   IV+Y +LIDGLC+ G++E A+  F   L   L P+V  Y  LI G C   
Sbjct: 535 EMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNN 594

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
               A +L+D M   G+ PD    + L D NL+    QE  +
Sbjct: 595 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 636



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 102/191 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   ++ A+K+  Q+T+  ++PD+I Y +II G+CS  +L+E   + E++    +  N 
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +  T +IDA+ K G+  DA   F +M + G +A +VTY  LIDG  ++  ++ A D +  
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN+  Y+ LIDGLC    +E A   F       + PD+  +  LI G  K G 
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630

Query: 183 PTEAMQLYDSM 193
             EA+ L   M
Sbjct: 631 LQEALVLISRM 641



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 98/195 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KL   +   GL P+  TY ++I   C    L EA +L   +    +K N +
Sbjct: 347 KEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D  CK GRM +A  +F  ML+ G   N   Y+ L+ GY K++ M+ A  + ++M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E NI P+++ Y  +I G C +  +EE            +  + V    +I  Y KAG+ 
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526

Query: 184 TEAMQLYDSMLRNGI 198
           ++A+  +  M   G+
Sbjct: 527 SDALNFFQEMQDVGV 541



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 96/173 (55%)

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           + F  +    + P+  T+ ++ID  CKEG ++++  +F +M E G   +VVTY+ LIDGY
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
            K  +++    ++ EM +    P+I++Y+ LI+  CK   M  A   F    +N L P+V
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           VTY+ LI  +CK G    A++L   M R G++P+    ++L D N ++    E
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTE 388



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 97/185 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F ++ D G+E  I+TY  +I G C    ++ AV  F ++  + L+PN   +T LID
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 588

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C    ++ A  +F +M  +G   ++  ++ LIDG  K  N++ A  +   M E  I  
Sbjct: 589 GLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  Y+ L+ G  + G + +A   F+  ++  +LP+ V    L+R Y K G+  EA++L 
Sbjct: 649 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 708

Query: 191 DSMLR 195
           + M R
Sbjct: 709 NEMER 713



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 93/182 (51%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            ++ +   +  L  L+EA + F ++   +  P + +   L+    K G        F+ M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           +  G   +V TY+ +ID   K  +++++  ++ +M E  +SP++V+Y+ LIDG  K G +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EE    F+   D   +PD++TY  LI  YCK  +   A + +  M  NG+ P+ +  STL
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 209 AD 210
            D
Sbjct: 342 ID 343



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 78/145 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+  F ++   GL+P++  Y ++I G C  N ++ A +LF+++ C  + P+   FT 
Sbjct: 561 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTA 620

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID   K G + +A ++ S+M E   + ++  Y+ L+ G+ +   +  A   + EM E  
Sbjct: 621 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 680

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL 152
           I P  V    L+    KRG ++EA+
Sbjct: 681 ILPEEVLCICLLREYYKRGQLDEAI 705



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++A KLF ++  RG+ PDI  +  +I G      L EA+ L  ++T + ++ +   +T 
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           L+  F + G +  A   F++M+EKG     V   CL+  Y+K   +  A ++  EM
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 20/86 (23%), Positives = 45/86 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K  +L  AL L  ++T+  +E D+  Y +++ G+     L +A + F ++    + P  
Sbjct: 626 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 685

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKM 88
           +    L+  + K G++D+A  + ++M
Sbjct: 686 VLCICLLREYYKRGQLDEAIELKNEM 711


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 120/205 (58%), Gaps = 7/205 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++T +G+  D++TYNT+I G+C + +L EA+ L   +    + P+  T+TIL+D
Sbjct: 217 AYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVD 276

Query: 71  AFCKEGRMDDATMMFS-------KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           A CKEG++ +A    S       +M ++G  A+V+TYS LIDG  K+ ++  A  ++ +M
Sbjct: 277 ALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 336

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I PN+ +++IL+DGL K G +++A   F   L      +V TY ++I G+CK G  
Sbjct: 337 KDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLL 396

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+ +   M  NG +P+     T+
Sbjct: 397 EEALTMLSKMEDNGCIPNAFTFETI 421



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 7/211 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L  +G + + + Y T+I G C +     A++L +K+     KP+ + ++
Sbjct: 143 QVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYS 202

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  A+VVTY+ LI G+     +K A  +   M   
Sbjct: 203 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLK 262

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD------NHLLP-DVVTYAILIRGYCK 179
            I+P++ +Y+IL+D LCK G ++EA        D      +   P DV+TY+ LI G CK
Sbjct: 263 TINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 322

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            G    A+ L++ M   GI P+    + L D
Sbjct: 323 NGHLDRAIALFNKMKDQGIRPNMFTFTILLD 353



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 10/215 (4%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH+        +  ++  RG  P  +T NT+I G C   ++ +A+   +KL     + N 
Sbjct: 104 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 163

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +  LI+  CK G    A  +  K+  +  K +VV YS +ID   K Q +  A+ ++ E
Sbjct: 164 VGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSE 223

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    IS ++V+Y+ LI G C  G ++EA+   +  +   + PDV TY IL+   CK G+
Sbjct: 224 MTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGK 283

Query: 183 PTEAMQ-------LYDSMLRNGIMPDGLLLSTLAD 210
             EA +       L D M   G   D +  S+L D
Sbjct: 284 VKEAKRRISYVWDLIDEMRDRGQPADVITYSSLID 318



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 102/201 (50%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + + L  +L  +G++PD+ T N +I  +C + ++     +  K+      P+++T   LI
Sbjct: 76  STVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 135

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C +G++  A     K+L +G + N V Y  LI+G  K  + ++A  + +++      
Sbjct: 136 KGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTK 195

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V YS +ID LCK  L+ EA   F       +  DVVTY  LI G+C  G+  EA+ L
Sbjct: 196 PDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGL 255

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+   I PD    + L D
Sbjct: 256 LNVMVLKTINPDVYTYTILVD 276



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 76/132 (57%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ DRG   D+ITY+++I G C    LD A+ LF K+    ++PN  TFTIL+D   
Sbjct: 297 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLW 356

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+ DA  +F  +L KG   NV TY+ +I+G+ K   ++ A  +  +M +N   PN  
Sbjct: 357 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAF 416

Query: 134 SYSILIDGLCKR 145
           ++  +I  L K+
Sbjct: 417 TFETIIIALFKK 428



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ LF ++ D+G+ P++ T+  ++ G     RL +A ++F+ L       N
Sbjct: 320 LCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLN 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ++I+  CK+G +++A  M SKM + G   N  T+  +I   FK      A  +  
Sbjct: 380 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 439

Query: 122 EM 123
           +M
Sbjct: 440 QM 441



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANV 97
           S+  +D+AV  F ++ C++  P  I F  ++D+F K      +T+  S  LE KG + ++
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY--STVSLSHRLELKGIQPDL 93

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            T + LI+ +     +   F V  ++ +    P+ V+ + LI GLC +G +++AL+    
Sbjct: 94  FTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDK 153

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L      + V Y  LI G CK G    A++L   +      PD ++ ST+ D
Sbjct: 154 LLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIID 206



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F  L  +G   ++ TYN +I G+C    L+EA+ +  K+      PN
Sbjct: 355 LWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 414

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           + TF  +I A  K+   D A  +  +M+ +G
Sbjct: 415 AFTFETIIIALFKKDENDKAEKLLRQMIARG 445


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 116/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL LF Q+T +G++P++ TYN +I G C+ +R  EA  L   +    + P+
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ++   F K G +  A  +FS M   G + NVVTY+ +I  +     MK A +V++
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNIV+Y+ LI G C+   M +A+Y     ++N L PDVVT++ LI G+CKAG
Sbjct: 296 LMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAG 355

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P  A +L+  M ++G +PD
Sbjct: 356 KPVAAKELFFVMHKHGQLPD 375



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F  +  +G  P+I+TYN++I G+C    +++A+    ++    L P+ +T++ LI 
Sbjct: 290 AMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIG 349

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G+   A  +F  M + G   ++ T + ++DG FK      A  ++ E+ + N   
Sbjct: 350 GFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDL 409

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I+ YSI+++G+C  G + +AL  F       +  DVVTY I+I G CK G   +A  L 
Sbjct: 410 DIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLL 469

Query: 191 DSMLRNGIMPD 201
             M  NG  PD
Sbjct: 470 MKMEENGCPPD 480



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 108/210 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L   ++  G++P++ T+N +I   C LN       +   +  + ++P+ +TFT
Sbjct: 41  HYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFT 100

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++  C EG +  A      + + G +++  T   +I+G  K  +  +A    ++M E 
Sbjct: 101 TIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQ 160

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N + ++ +YS ++DGLCK G++ EAL  F       + P++ TY  LI G C   R  EA
Sbjct: 161 NCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEA 220

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
             L  +M+R GIMPD    + +A   L++ 
Sbjct: 221 APLLANMMRKGIMPDVQTFNVIAGRFLKTG 250



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H  AAL    ++ ++    D+  Y+ ++ G C    + EA+ LF ++T   ++PN
Sbjct: 141 LCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPN 200

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C   R  +A  + + M+ KG   +V T++ +   + K+  +  A  ++ 
Sbjct: 201 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFS 260

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I  N+V+Y+ +I   C    M++A+  F   +    LP++VTY  LI G+C+  
Sbjct: 261 FMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETK 320

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +AM     M+ NG+ PD +  STL
Sbjct: 321 NMNKAMYFLGEMVNNGLDPDVVTWSTL 347



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H      + G +   G+EP I+T+ TI+ G C    + +A++  + L  +  + +  T  
Sbjct: 76  HTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRG 135

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A     KM E+    +V  YS ++DG  K   +  A D++ +M   
Sbjct: 136 AIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGK 195

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN+ +Y+ LI GLC     +EA       +   ++PDV T+ ++   + K G  + A
Sbjct: 196 GIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRA 255

Query: 187 MQLYDSMLRNGI 198
             ++  M   GI
Sbjct: 256 KSIFSFMGHMGI 267



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 36/219 (16%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR------------------------ 42
           +++ A+   G++ + GL+PD++T++T+I G+C   +                        
Sbjct: 321 NMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCA 380

Query: 43  --LD---------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
             LD         EA+ LF +L  +    + I ++I+++  C  G+++DA  +FS +  K
Sbjct: 381 IILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSK 440

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K +VVTY+ +I+G  K   +  A D+  +M EN   P+  +Y++ + GL +R  + ++
Sbjct: 441 GVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKS 500

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
                         +  T  +LI  Y  A +   A Q++
Sbjct: 501 TKYLMFMKGKGFRANATTTKLLIN-YFSANKENRAFQVF 538



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 86/194 (44%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  + ++      P +  +N +      +     A+ L + ++ + +KPN  T  I
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  C+         +   M + G + ++VT++ +++G     N+  A    + + +  
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              +  +   +I+GLCK G    AL       + +   DV  Y+ ++ G CK G   EA+
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 188 QLYDSMLRNGIMPD 201
            L+  M   GI P+
Sbjct: 187 DLFSQMTGKGIQPN 200



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 67/155 (43%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           ++  +D A+  + K+  ++  P    F +L     K      A  +   M   G K NV 
Sbjct: 3   NVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVS 62

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T++ +I+   +  +    F V   M +  + P+IV+++ +++GLC  G + +A+      
Sbjct: 63  THNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL 122

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            D     D  T   +I G CK G  + A+     M
Sbjct: 123 KDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKM 157


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 120/203 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  ALK+  ++ ++G   D++TYNTI+ G C    L EA +LF ++T   + P+  TFT 
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ + K+G M+ A  +F  M+++  K +VVTY+ LIDG+ K   M+   +++ +M    
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN +SY ILI+G C  G + EA   +   ++      ++T   +++GYC+AG   +A 
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +   +ML  GI+PDG+  +TL +
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLIN 647



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 127/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +++ A+ LF  +  R L+PD++TYNT+I G+C  + +++  +L+  +   ++ PN I
Sbjct: 511 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 570

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +C  G + +A  ++ +M+EKG +A ++T + ++ GY ++ N   A +    M
Sbjct: 571 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 630

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+ ++Y+ LI+G  K   M+ A    +   ++ LLPDV+TY +++ G+ + GR 
Sbjct: 631 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM 690

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA  +   M+  G+ PD    ++L + ++  +  +E
Sbjct: 691 QEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 727



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 121/205 (59%), Gaps = 5/205 (2%)

Query: 1   MLIKECHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCV 56
           +L++ C  D    A ++F ++  +G+ PD+++++ +I G  S N  LD+A++ F  +   
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNA 423

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L P+++ +TILI  FC+ G M +A  +  +MLE+G   +VVTY+ +++G  K + +  A
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +++ EM E  + P+  +++ LI+G  K G M +A+  F   +  +L PDVVTY  LI G
Sbjct: 484 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 543

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
           +CK     +  +L++ M+   I P+
Sbjct: 544 FCKGSEMEKVNELWNDMISRRIYPN 568



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++        + ++G+ PD++TYNT+I  YC    L+EA +L + ++   LKP 
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK G+   A  +  +ML+ G   +  TY+ L+    ++ NM  A  +++
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++VS+S LI  L K G +++AL  F    +  L PD V Y ILI G+C+ G
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+++ D ML  G + D +  +T+
Sbjct: 444 VMSEALKVRDEMLEQGCVLDVVTYNTI 470



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A +LF ++T+RG+ PD  T+ T+I GY     +++AV LFE +    LKP+
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID FCK   M+    +++ M+ +    N ++Y  LI+GY     +  AF +++
Sbjct: 534 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E      I++ + ++ G C+ G   +A       L   ++PD +TY  LI G+ K  
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L + M  +G++PD
Sbjct: 654 NMDRAFALVNKMENSGLLPD 673



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +L+  +  R + P+ I+Y  +I GYC++  + EA +L++++     +   I
Sbjct: 546 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 605

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++  +C+ G    A    S ML KG   + +TY+ LI+G+ K +NM  AF +  +M
Sbjct: 606 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P++++Y+++++G  ++G M+EA       ++  + PD  TY  LI G+      
Sbjct: 666 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 725

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +++D ML+ G +PD
Sbjct: 726 KEAFRVHDEMLQRGFVPD 743



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  L+ A +L   ++ +GL+P + TYN II G C   +   A  + +++  + + P++ 
Sbjct: 301 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   C+   M DA  +F +M  +G   ++V++S LI    K+  +  A   + +M
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P+ V Y+ILI G C+ G+M EAL      L+   + DVVTY  ++ G CK    
Sbjct: 421 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 480

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +EA +L+  M   G+ PD    +TL +
Sbjct: 481 SEADELFTEMTERGVFPDFYTFTTLIN 507



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  LK+       G+ PD  TYN ++   C  + + +A ++F+++    + P+ ++F+ 
Sbjct: 347 LDEMLKI-------GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K G +D A   F  M   G   + V Y+ LI G+ ++  M  A  V +EM E  
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ +++GLCK  ++ EA   F    +  + PD  T+  LI GY K G   +A+
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L++ M++  + PD +  +TL D
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLID 542



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 101/194 (52%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  L  +GL   I   N+++ G   +  +D A ++++++    ++ N  T  I+I+A CK
Sbjct: 207 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 266

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
             ++++     S M EKG   +VVTY+ LI+ Y +   ++ AF++ + M    + P + +
Sbjct: 267 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 326

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ +I+GLCK G    A       L   + PD  TY IL+   C+     +A +++D M 
Sbjct: 327 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 386

Query: 195 RNGIMPDGLLLSTL 208
             G++PD +  S L
Sbjct: 387 SQGVVPDLVSFSAL 400



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++ ++  Y    +L E  + F  L    L  +      L+    K G +D A  ++ +
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ++  G + NV T + +I+   K+Q +++      +M E  + P++V+Y+ LI+  C++GL
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +EEA           L P V TY  +I G CK G+   A  + D ML+ G+ PD
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + F +L+  + +  ++ +    F  +  KG   ++   + L+ G  K   +  A+++Y
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +E+  + +  N+ + +I+I+ LCK   +E          +  + PDVVTY  LI  YC+ 
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G   EA +L DSM   G+ P
Sbjct: 303 GLLEEAFELMDSMSGKGLKP 322



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE ++D A  L  ++ + GL PD+ITYN I+ G+    R+ EA  +  K+    + P+
Sbjct: 649 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPD 708

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T LI+    +  + +A  +  +ML++G
Sbjct: 709 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/173 (17%), Positives = 70/173 (40%), Gaps = 17/173 (9%)

Query: 55  CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-----------------KANV 97
           C   K +  +F+ +I    +  R+ DA  +  +M+ K                    +N 
Sbjct: 125 CPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNP 184

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           + +  L+  Y +++ ++   + +  +    +  +I + + L+ GL K G ++ A   +  
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + + +  +V T  I+I   CK  +          M   G+ PD +  +TL +
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 297


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 1/213 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  ++ ++  +G+ PD++TY T+I G+C +  L EA  L  ++    + PN  TF I
Sbjct: 213 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNI 272

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA  KEG+M +A ++ + M++   K +V TY+ LIDGYF    +K A  V+  M +  
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P++  Y+ +I+GLCK  +++EA+  F      +++PD+VTY  LI G CK      A+
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 392

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            L   M   GI PD    + L D  L  SG  E
Sbjct: 393 ALCKRMKEQGIQPDVYSYTILLD-GLCKSGRLE 424



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL    QL  +G + D ++Y T+I G C         +L  KL    +KP+ + +  
Sbjct: 143 IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 202

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ CK   + DA  ++S+M+ KG   +VVTY+ LI G+    ++K AF +  EM   N
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+PN+ +++ILID L K G M+EA       +   + PDV TY  LI GY        A 
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAK 322

Query: 188 QLYDSMLRNGIMPD 201
            ++ SM + G+ PD
Sbjct: 323 YVFYSMAQRGVTPD 336



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 108/202 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  L   +    ++PD+ TYN++I GY  ++ +  A  +F  +    + P+
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T +I+  CK   +D+A  +F +M  K    ++VTY+ LIDG  K+ +++ A  + +
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I P++ SY+IL+DGLCK G +E+A   F   L      +V  Y +LI   CKAG
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAG 456

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              EA+ L   M   G MPD +
Sbjct: 457 FFDEALDLKSKMEDKGCMPDAV 478



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 103/188 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  RG+ PD+  Y  +I G C    +DEA+ LFE++    + P+ +T+  LID  C
Sbjct: 324 VFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLC 383

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   ++ A  +  +M E+G + +V +Y+ L+DG  KS  ++ A ++++ +       N+ 
Sbjct: 384 KNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVH 443

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y++LI+ LCK G  +EAL       D   +PD VT+ I+IR   +     +A ++   M
Sbjct: 444 AYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503

Query: 194 LRNGIMPD 201
           +  G++ +
Sbjct: 504 IARGLLKE 511



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 100/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+   H    + LF Q    G+ PD+ T + +I  +C    +  A  +F  +      PN
Sbjct: 67  LVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPN 126

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   LI   C  G +  A     +++ +G + + V+Y  LI+G  K+   K+   +  
Sbjct: 127 AITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLR 186

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  +++ P++V Y+ +I+ LCK  L+ +A   +   +   + PDVVTY  LI G+C  G
Sbjct: 187 KLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMG 246

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  L + M    I P+    + L D
Sbjct: 247 HLKEAFSLLNEMKLKNINPNVCTFNILID 275



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 85/144 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ LF ++  + + PDI+TYN++I G C  + L+ A+ L +++    ++P+
Sbjct: 347 LCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPD 406

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TIL+D  CK GR++DA  +F ++L KG   NV  Y+ LI+   K+     A D+  
Sbjct: 407 VYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKS 466

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M +    P+ V++ I+I  L ++
Sbjct: 467 KMEDKGCMPDAVTFDIIIRALFEK 490



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 2/185 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    +N I+    +       + LF++     + P+  T +ILI+ FC +  +  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+ +L++G   N +T + LI G      +K A   ++++       + VSY  LI+GLCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 145 RGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G   +A+      L+ H + PDVV Y  +I   CK     +A  +Y  M+  GI PD +
Sbjct: 175 TG-ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233

Query: 204 LLSTL 208
             +TL
Sbjct: 234 TYTTL 238



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 67/122 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ L  ++ ++G++PD+ +Y  ++ G C   RL++A ++F++L       N
Sbjct: 382 LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLN 441

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T+LI+  CK G  D+A  + SKM +KG   + VT+  +I   F+      A  +  
Sbjct: 442 VHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILR 501

Query: 122 EM 123
           EM
Sbjct: 502 EM 503



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 74/165 (44%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           AV  F  +  ++  P +  F  ++ +            +F +    G   ++ T S LI+
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
            +    ++  AF V+  + +    PN ++ + LI GLC RG +++ALY     +      
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D V+Y  LI G CK G      +L   +  + + PD ++ +T+ +
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIN 205


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 120/203 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  ALK+  ++ ++G   D++TYNTI+ G C    L EA +LF ++T   + P+  TFT 
Sbjct: 288 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 347

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ + K+G M+ A  +F  M+++  K +VVTY+ LIDG+ K   M+   +++ +M    
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN +SY ILI+G C  G + EA   +   ++      ++T   +++GYC+AG   +A 
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +   +ML  GI+PDG+  +TL +
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLIN 490



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 127/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +++ A+ LF  +  R L+PD++TYNT+I G+C  + +++  +L+  +   ++ PN I
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 413

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +C  G + +A  ++ +M+EKG +A ++T + ++ GY ++ N   A +    M
Sbjct: 414 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 473

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+ ++Y+ LI+G  K   M+ A    +   ++ LLPDV+TY +++ G+ + GR 
Sbjct: 474 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM 533

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA  +   M+  G+ PD    ++L + ++  +  +E
Sbjct: 534 QEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 570



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 121/205 (59%), Gaps = 5/205 (2%)

Query: 1   MLIKECHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCV 56
           +L++ C  D    A ++F ++  +G+ PD+++++ +I G  S N  LD+A++ F  +   
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNA 266

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L P+++ +TILI  FC+ G M +A  +  +MLE+G   +VVTY+ +++G  K + +  A
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +++ EM E  + P+  +++ LI+G  K G M +A+  F   +  +L PDVVTY  LI G
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
           +CK     +  +L++ M+   I P+
Sbjct: 387 FCKGSEMEKVNELWNDMISRRIYPN 411



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++        + ++G+ PD++TYNT+I  YC    L+EA +L + ++   LKP 
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 166

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK G+   A  +  +ML+ G   +  TY+ L+    ++ NM  A  +++
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++VS+S LI  L K G +++AL  F    +  L PD V Y ILI G+C+ G
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 286

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+++ D ML  G + D +  +T+
Sbjct: 287 VMSEALKVRDEMLEQGCVLDVVTYNTI 313



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A +LF ++T+RG+ PD  T+ T+I GY     +++AV LFE +    LKP+
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 376

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID FCK   M+    +++ M+ +    N ++Y  LI+GY     +  AF +++
Sbjct: 377 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 436

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E      I++ + ++ G C+ G   +A       L   ++PD +TY  LI G+ K  
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L + M  +G++PD
Sbjct: 497 NMDRAFALVNKMENSGLLPD 516



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +L+  +  R + P+ I+Y  +I GYC++  + EA +L++++     +   I
Sbjct: 389 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 448

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++  +C+ G    A    S ML KG   + +TY+ LI+G+ K +NM  AF +  +M
Sbjct: 449 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P++++Y+++++G  ++G M+EA       ++  + PD  TY  LI G+      
Sbjct: 509 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 568

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +++D ML+ G +PD
Sbjct: 569 KEAFRVHDEMLQRGFVPD 586



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  L+ A +L   ++ +GL+P + TYN II G C   +   A  + +++  + + P++ 
Sbjct: 144 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   C+   M DA  +F +M  +G   ++V++S LI    K+  +  A   + +M
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P+ V Y+ILI G C+ G+M EAL      L+   + DVVTY  ++ G CK    
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +EA +L+  M   G+ PD    +TL +
Sbjct: 324 SEADELFTEMTERGVFPDFYTFTTLIN 350



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  LK+       G+ PD  TYN ++   C  + + +A ++F+++    + P+ ++F+ 
Sbjct: 190 LDEMLKI-------GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K G +D A   F  M   G   + V Y+ LI G+ ++  M  A  V +EM E  
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ +++GLCK  ++ EA   F    +  + PD  T+  LI GY K G   +A+
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L++ M++  + PD +  +TL D
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLID 385



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 105/206 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   L    + F  L  +GL   I   N+++ G   +  +D A ++++++    ++ N 
Sbjct: 38  VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 97

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+I+A CK  ++++     S M EKG   +VVTY+ LI+ Y +   ++ AF++ + 
Sbjct: 98  YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 157

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P + +Y+ +I+GLCK G    A       L   + PD  TY IL+   C+   
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 217

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A +++D M   G++PD +  S L
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSAL 243



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++ ++  Y    +L E  + F  L    L  +      L+    K G +D A  ++ +
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ++  G + NV T + +I+   K+Q +++      +M E  + P++V+Y+ LI+  C++GL
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +EEA           L P V TY  +I G CK G+   A  + D ML+ G+ PD
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201



 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + F +L+  + +  ++ +    F  +  KG   ++   + L+ G  K   +  A+++Y
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +E+  + +  N+ + +I+I+ LCK   +E          +  + PDVVTY  LI  YC+ 
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G   EA +L DSM   G+ P
Sbjct: 146 GLLEEAFELMDSMSGKGLKP 165



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE ++D A  L  ++ + GL PD+ITYN I+ G+    R+ EA  +  K+    + P+
Sbjct: 492 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPD 551

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T LI+    +  + +A  +  +ML++G
Sbjct: 552 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/116 (18%), Positives = 52/116 (44%)

Query: 95  ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           +N + +  L+  Y +++ ++   + +  +    +  +I + + L+ GL K G ++ A   
Sbjct: 25  SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   + + +  +V T  I+I   CK  +          M   G+ PD +  +TL +
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 140


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 111/191 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF  +T +G++PD++ YN++I G C+  R  EA  L   +    + PN  TF +L+D
Sbjct: 231 ALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVD 290

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK+G +  A  +   M+  G + +VVTY+ +I G+     M  A  V+E M      P
Sbjct: 291 NFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLP 350

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS LI G CK   + +AL+     +++ L PDVVT++ LI G+CKAG+P  A +L+
Sbjct: 351 NLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF 410

Query: 191 DSMLRNGIMPD 201
            +M  +   P+
Sbjct: 411 CTMHEHDQHPN 421



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 107/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+K+F  +  +G  P+++TY+++I G+C    +++A+ L  ++    L P+ +T++ LI 
Sbjct: 336 AVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIG 395

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G+ + A  +F  M E     N+ T + ++DG FK Q    A  ++ EM + N+  
Sbjct: 396 GFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLEL 455

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+I++DG+C  G + +A   F C     +  DVV Y  +I+G CK G   +A  L 
Sbjct: 456 NVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLL 515

Query: 191 DSMLRNGIMPD 201
             M  NG +P+
Sbjct: 516 MKMEENGCLPN 526



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 1/211 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +++K  H    + L   +   G++PD+ T   II   C LN       +   +  + + P
Sbjct: 80  IIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDP 139

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +TF  LI+  C EG +  A      + + G ++N  TY  +I+G  K+ +   A    
Sbjct: 140 TVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYL 199

Query: 121 EEMCENNISPNIV-SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           E++   N   ++V +YS ++D LCK G++ EAL  F       + PD+V Y  LI G C 
Sbjct: 200 EKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCN 259

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            GR  EA  L  +M+R GIMP+    + L D
Sbjct: 260 FGRWKEATTLLGNMMRKGIMPNVQTFNVLVD 290



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 96/182 (52%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           +I Y+TI+   C    + EA+ LF  +T   ++P+ + +  LI   C  GR  +AT +  
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M+ KG   NV T++ L+D + K   +  A  +   M    + P++V+Y+ +I G C   
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M +A+  F   +    LP++VTY+ LI G+CK     +A+ L   M+ +G+ PD +  S
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391

Query: 207 TL 208
           TL
Sbjct: 392 TL 393



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 36/222 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--------------------- 42
           K  +++ AL L G++ + GL PD++T++T+I G+C   +                     
Sbjct: 364 KTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQ 423

Query: 43  -----LD---------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                LD         EA+ LF ++  + L+ N + + I++D  C  G+++DA  +FS +
Sbjct: 424 TCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCL 483

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             KG K +VV Y+ +I G  K   +  A ++  +M EN   PN  +Y++ + GL +R  +
Sbjct: 484 PSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDI 543

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             +           L  D  T  +LI  Y  A +   A+ ++
Sbjct: 544 SRSTKYLLLMKGKGLSADATTTELLIS-YFSANKENSALHVF 584



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 58/144 (40%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
           + A+  F K+  +   P    FT L     K         +   +   G K +V T + +
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           I+      +    F V   M +  + P +V+++ LI+GLC  G +  A        D   
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 164 LPDVVTYAILIRGYCKAGRPTEAM 187
             +  TY  +I G CKAG  + A+
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAI 196


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A ++   +  +G  PD  TY+ +I   C   ++++A  LF+++  V + P+  T+TI
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A   F +M   G  ANVVTY+ L+  Y K++ +  A D++  M +  
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL----------------YAFHCALDNHLLPDVVTYA 171
             PN ++YS L+DGLCK G +++A                 + F     + + P+VVTY 
Sbjct: 389 CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G CKA +  +A +L D+ML NG  P+ ++   L D
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALID 487



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 1/196 (0%)

Query: 16  GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
           G+ TD  + P+++TY  +I G C  +++ +A +L + +     +PN I +  LID FCK 
Sbjct: 434 GKHTD-SIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKV 492

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           G++D+A  +F +M + G    V TY+ LID  FK + +  A  V  +M E++ +PN+V+Y
Sbjct: 493 GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTY 552

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           + +IDGLC+ G  ++AL       +    P+VVTY  LI G  K+G+   ++QL+  M  
Sbjct: 553 TAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612

Query: 196 NGIMPDGLLLSTLADY 211
            G  P+ +    L ++
Sbjct: 613 KGCAPNYVTYRVLINH 628



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   G+ PD+ TY  +I  +C    +++A   F+++  +    N +T+T 
Sbjct: 304 VEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTA 363

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           L+ A+ K  ++  A+ +F++M++ G   N +TYS L+DG  K+  ++ A +VY ++    
Sbjct: 364 LLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTS 423

Query: 125 -------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
                         ++I+PN+V+Y  LIDGLCK   + +A       L N   P+ + Y 
Sbjct: 424 DNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G+CK G+   A +++  M + G +P     ++L D
Sbjct: 484 ALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLID 522



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 98/183 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G EP+ I Y+ +I G+C + ++D A ++F +++     P   T+T LID
Sbjct: 463 AQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLID 522

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+ R+D A  + S+M+E     NVVTY+ +IDG  +    + A  +   M E   SP
Sbjct: 523 AMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSP 582

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LIDGL K G ++ +L  F         P+ VTY +LI   C AG   EA  L 
Sbjct: 583 NVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLL 642

Query: 191 DSM 193
             M
Sbjct: 643 SEM 645



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 33/221 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++F +++  G  P + TY ++I       RLD A+++  ++      PN +T+T 
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  C+ G    A  + S M EKG   NVVTY+ LIDG  KS  +  +  ++ +M    
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF--------------HCA--------------- 158
            +PN V+Y +LI+  C  GL++EA                  +C+               
Sbjct: 615 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGL 674

Query: 159 ---LDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
              L++H  +P    Y +LI  + KAGR  EA++L+  M+ 
Sbjct: 675 LEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMME 715



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC------SLNRLDEAVQLFEKL---TCVQLKPN 61
           A KL  ++ D G  P  + YN  I   C      S + L  A +++E++   +CV  K N
Sbjct: 196 AYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVN 255

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  F       C  G+ D A  +   M+ KG   +  TYS +I    ++  ++ AF +++
Sbjct: 256 TANFA---RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 312

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++P++ +Y+ILID  CK GL+E+A   F          +VVTY  L+  Y KA 
Sbjct: 313 EMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAK 372

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +  +A  +++ M+  G  P+ +  S L D   ++   Q+ C
Sbjct: 373 QLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 7/202 (3%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I EC    ALKL   + ++G  P+++TY  +I G     ++D ++QLF +++     PN 
Sbjct: 562 IGECQ--KALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ +LI+  C  G +D+A  + S+M +      +  Y  ++ G+  S+   ++  + EE
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEE 677

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT---YAILIRGYCK 179
           +  +   P    Y +LID   K G +EEAL      ++     ++ +   Y  LI+  C 
Sbjct: 678 LESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL 737

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
           A +  +A +LY  + R G++P+
Sbjct: 738 ASQLEKAFELYSEITRKGVVPE 759



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 84/157 (53%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C + + D A Q+ + +      P++ T++ +I   C+  +++ A ++F +M   G   +V
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TY+ LID + K+  ++ A   ++EM     S N+V+Y+ L+    K   + +A   F+ 
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            +D    P+ +TY+ L+ G CKAG   +A ++Y  ++
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI 420



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 6/215 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++    D A+    ++      P+++TY T++ G+    +L    ++   +      PN
Sbjct: 117 LMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPN 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------ 115
              F  L+ ++C       A  +  +M + G     V Y+  I      + + S      
Sbjct: 177 PSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLAL 236

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  VYEEM  ++   N V+ +     LC  G  + A       +    +PD  TY+ +I 
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             C+A +  +A  L+  M   G+ PD    + L D
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +    +I G    +  DEA+    ++ C    PN +T+  L+  F K+ ++     + 
Sbjct: 106 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRII 165

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC-- 143
           + M+++G   N   ++ L+  Y  +++   A+ + + M +    P  V+Y+I I  +C  
Sbjct: 166 NMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGG 225

Query: 144 ----KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  L+  A   +   L +  + + V  A   R  C  G+   A Q+   M+  G +
Sbjct: 226 EELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFV 285

Query: 200 PD 201
           PD
Sbjct: 286 PD 287



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 3/184 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +L D G  P   TYN ++    +  ++D   ++ ++++      +  T      A CKEG
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R  DA +M  +   +  K + V  + +I G  ++     A      M  N+  PN+V+Y 
Sbjct: 90  RWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L+ G  K+  +       +  +     P+   +  L+  YC A     A +L   M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 197 GIMP 200
           G  P
Sbjct: 207 GCPP 210



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  T+  L+      G+MD    +  +M E G   +  T  C      K      A  
Sbjct: 37  RPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALV 96

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + E     +   + V  + +I GL +  L +EA+   H    N  +P+VVTY  L+ G+ 
Sbjct: 97  MIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFL 153

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           K  +     ++ + M++ G  P+  L ++L
Sbjct: 154 KKKQLGWCKRIINMMMKEGCNPNPSLFNSL 183



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT---FT 66
           A+L L  +L   G  P    Y  +I  +    RL+EA++L +++  +    N  +   +T
Sbjct: 670 ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYT 729

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI A C   +++ A  ++S++  KG    +  + CLI G  K      A  +   +C+ 
Sbjct: 730 SLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789

Query: 127 NIS 129
            ++
Sbjct: 790 GVN 792


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 123/217 (56%), Gaps = 8/217 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ LF ++    ++PD+ T+N ++ G+C   RL +A  + + +    +KPN  TF  
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCK+ +M +   +F+ M+++G K NVVTY  L+DGY   + +  A  ++  M +  
Sbjct: 319 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRG 378

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++ N+ SY+I+I+G CK   +++A+  F      H++PDVVTY  LI G CK+G+ + A 
Sbjct: 379 VTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAF 438

Query: 188 QLYDSMLRNGIMPD--------GLLLSTLADYNLQSS 216
           QL + M   G  P+          LL+ L D  +Q +
Sbjct: 439 QLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPN 475



 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 120/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H++ A  L+ ++  + + PD++TY+ +I G+  + +L +A+ LF K+    +KP+  
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+D FCKEGR+  A  +   M+ +  K NV T++ L+DG+ K + MK    V+  M
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I PN+V+Y  L+DG C    + +A   F+      +  +V +Y I+I G+CK  + 
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +AM+L+  M    I+PD +  ++L D
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLID 426



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 111/200 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +  ++   G EPDIIT NT I G+C   ++ +A+   +KL  +    + +++  LI+
Sbjct: 122 AFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 181

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G    A  +  ++  K  + N V Y+ +IDG  K +++  AFD+Y EM    ISP
Sbjct: 182 GLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISP 241

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+YS LI G    G +++A+  F+  +  ++ PDV T+ IL+ G+CK GR  +A  + 
Sbjct: 242 DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+   I P+    +TL D
Sbjct: 302 DMMMIQDIKPNVSTFNTLVD 321



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L   G   D ++Y T+I G C +     A+QL  ++    ++ N++ + 
Sbjct: 153 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYN 212

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID   K+  ++DA  ++S+M+ K    +VVTYS LI G+F    +K A D++ +M   
Sbjct: 213 TVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILE 272

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P++ +++IL+DG CK G +++A       +   + P+V T+  L+ G+CK  +  E 
Sbjct: 273 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEG 332

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++  M++ GI P+ +   +L D
Sbjct: 333 KTVFAMMMKQGIKPNVVTYCSLMD 356



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 118/208 (56%), Gaps = 6/208 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L  ++  + ++ + + YNT+I G      +++A  L+ ++   ++ P+ +T++ LI
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F   G++ DA  +F+KM+ +  K +V T++ L+DG+ K   +K A +V + M   +I 
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+ +++ L+DG CK   M+E    F   +   + P+VVTY  L+ GYC   +  +A ++
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +++M + G+       + +  YN+  +G
Sbjct: 371 FNTMSQRGVT------ANVHSYNIMING 392



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 103/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    L L  Q+   G+ P+ +T+N +I  +C L  +  A  +  K+  +  +P+
Sbjct: 78  LVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPD 137

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT    I  FC +G++  A     K++  G   + V+Y  LI+G  K    ++A  +  
Sbjct: 138 IITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLR 197

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    +  N V Y+ +IDG+ K   + +A   +   +   + PDVVTY+ LIRG+   G
Sbjct: 198 RVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVG 257

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L++ M+   I PD    + L D
Sbjct: 258 KLKDAIDLFNKMILENIKPDVYTFNILVD 286



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 23/107 (21%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL------------------ 49
           +D A+KLF ++  + + PD++TYN++I G C   ++  A QL                  
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNS 458

Query: 50  -----FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                  KL    ++PN  T TILI   C+ G+++ A  +F  +L K
Sbjct: 459 ILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 114/201 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  L+ ++  +G+ P++ TY T+I G+C +  L EA  L  ++    + P+  TF I
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA  KEG++D+A  +F +M  K    N+VTY+ LIDG  K+ +++ A  + ++M E  
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+ SY+IL+D LCK G +E A   F   L      +V TY ++I G CKAG   + M
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M   G MP+ +   T+
Sbjct: 397 DLKSKMEGKGCMPNAITFKTI 417



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL    ++  +G + D ++Y T+I G C         +L  KL    +KP+ + +T 
Sbjct: 147 IKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTT 206

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK   + DA  ++S+M+ KG   NV TY+ LI G+    N+K AF +  EM   N
Sbjct: 207 IIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKN 266

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +++ILID L K G ++EA+  F      ++ P++VTY  LI G CK      A+
Sbjct: 267 INPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 326

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M   GI P+    + L D
Sbjct: 327 ALCKKMKEQGIQPNVYSYTILLD 349



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K     A  +L  +L    ++PD++ Y TII   C    L +A  L+ ++    + PN
Sbjct: 176 LCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPN 235

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LI  FC  G + +A  + ++M  K    +V T++ LID   K   +  A  ++E
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+ PNIV+Y+ LIDGLCK   +E A+       +  + P+V +Y IL+   CK G
Sbjct: 296 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGG 355

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A Q +  +L  G
Sbjct: 356 RLENAKQFFQHLLVKG 371



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K       + LF Q    G+ PD+ T + +I  +C L  +  A  +F  +      PN
Sbjct: 71  LVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPN 130

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   LI   C  G +  A     K++ +G + + V+Y  LI+G  K+   K+   +  
Sbjct: 131 AITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLR 190

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  +++ P++V Y+ +I  LCK  L+ +A   +   +   + P+V TY  LI G+C  G
Sbjct: 191 KLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMG 250

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  L + M    I PD    + L D
Sbjct: 251 NLKEAFSLLNEMKLKNINPDVYTFNILID 279



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 83/144 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A+ LF ++  + + P+I+TY ++I G C  + L+ A+ L +K+    ++PN
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TIL+DA CK GR+++A   F  +L KG   NV TY+ +I+G  K+       D+  
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 400

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M      PN +++  +I  L ++
Sbjct: 401 KMEGKGCMPNAITFKTIICALLEK 424



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 2/185 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    +N I+       R    + LF++     + P+  T +ILI+ FC    +  A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+ +L++G   N +T + LI G      +K A   ++++       + VSY  LI+GLCK
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 145 RGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G   +A+      L+ H + PD+V Y  +I   CK     +A  LY  M+  GI P+  
Sbjct: 179 AG-ETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237

Query: 204 LLSTL 208
             +TL
Sbjct: 238 TYTTL 242



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ L  ++ ++G++P++ +Y  ++   C   RL+ A Q F+ L       N
Sbjct: 316 LCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 375

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ++I+  CK G   D   + SKM  KG   N +T+  +I    +      A     
Sbjct: 376 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLR 435

Query: 122 EM 123
           EM
Sbjct: 436 EM 437



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A + F  L  +G   ++ TYN +I G C      + + L  K+      PN
Sbjct: 351 LCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPN 410

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +ITF  +I A  ++   D A     +M+ +G
Sbjct: 411 AITFKTIICALLEKDENDKAEKFLREMIARG 441


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +L   LT +G+ PD+ T+N++I G C  N    A++LFE++      P+
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LID+ C  GR+++A  +  +M   G   NVVTY+ LIDG+ K++ ++ A ++++
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    IS N+V+Y+ LIDGLCK   +EEA       L   L PD  TY  L+  +C+AG
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  +  +M  NG  PD +   TL
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTL 602



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL++   +   G +PDI TYN++I G C L  ++EAV++  ++      PN++T+ 
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   CKE ++++AT +   +  KG   +V T++ LI G   + N + A +++EEM   
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450

Query: 127 NISP-----------------------------------NIVSYSILIDGLCKRGLMEEA 151
              P                                   N+V+Y+ LIDG CK   +EEA
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEA 510

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              F       +  +VVTY  LI G CK  R  EA QL D ML  G+ PD    ++L  Y
Sbjct: 511 EEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 105/189 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF ++  +G  PD  TYN +I   CS  RL+EA+ L +++       N +T+  LID
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  R+++A  +F +M  +G   NVVTY+ LIDG  K++ ++ A  + ++M    + P
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP 559

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ L+   C+ G +++A         N   PD VTY  LI G  KAGR   A +L 
Sbjct: 560 DKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLL 619

Query: 191 DSMLRNGIM 199
            ++   G++
Sbjct: 620 RTVQLKGMV 628



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+E +++ AL++  Q+   G     +T N ++ GYC   R++E +   ++++    +P+
Sbjct: 256 FIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD 315

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  L++  C+ G +  A  +   ML++G   ++ TY+ LI G  K   ++ A ++  
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   + SPN V+Y+ LI  LCK   +EEA           +LPDV T+  LI+G C   
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
               AM+L++ M   G  PD    + L D +L S G  E  +
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLID-SLCSRGRLEEAL 476



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 36/231 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ AL L  ++   G   +++TYNT+I G+C   R++EA ++F+++    +  N +T+ 
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK  R+++A  +  +ML +G K +  TY+ L+  + ++ ++K A D+ + M  N
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 127 NISPNIVSYSILIDGLCKRGLME-----------------------------------EA 151
              P+ V+Y  LI GL K G +E                                   EA
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEA 650

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT-EAMQLYDSMLRNGIMPD 201
           +  F   ++    PD VTY ++ RG C  G P  EA+     M   G +PD
Sbjct: 651 VRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 102/192 (53%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  RG++PD+ T+N +I   C  +++  A+ + E++    L P+  TFT L+  F +EG
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            M+ A  +  +M+  G  ++ VT + L+ GY K   ++      +EM      P+  +++
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L++GLC+ G ++ AL      L     PD+ TY  LI G CK G   EA+++ + M+  
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380

Query: 197 GIMPDGLLLSTL 208
              P+ +  +TL
Sbjct: 381 DFSPNTVTYNTL 392



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A+ +  ++   GL PD  T+ T++ G+     ++ A+++ E++       +
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T  +L+  +CKEGR+++      +M  +G + +  T++ L++G  +  ++K A ++ +
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P+I +Y+ LI GLCK G +EEA+   +  +     P+ VTY  LI   CK  
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN 400

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA +L   +   GI+PD
Sbjct: 401 QVEEATELARVLTSKGILPD 420



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL+ D  TYN ++      N+L     +  ++    +KP+  TF ILI A C+  ++  A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            +M  +M   G   +  T++ L+ G+ +  NM  A  + E+M       + V+ ++L+ G
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +EE L       +    PD  T+  L+ G C+ G    A+++ D ML+ G  PD
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   GL+PD  TYN+++  +C    + +A  + + +T    +P+
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPD 595

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+  LI    K GR++ A+ +   +  KG      TY+ +I   F+ +    A  ++ 
Sbjct: 596 SVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFR 655

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E    P+ V+Y ++  GLC   G + EA+       D   LPD  ++ +L  G C  
Sbjct: 656 EMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCAL 715

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                 ++L + +++     D
Sbjct: 716 SMEDTLIKLVNRVMKQANFSD 736



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 36/183 (19%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           TF ILI+++ K    D+A  +   M E+ G K +  TY+ L++       +K    V   
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201

Query: 123 MCENNISPNIVSYSILIDGLCKRG------LMEEALYAFHCALDNHLLPDV--------- 167
           M    I P++ +++ILI  LC+        LM E + ++  + D      +         
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 168 --------------------VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                               VT  +L+ GYCK GR  E +   D M   G  PD    ++
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321

Query: 208 LAD 210
           L +
Sbjct: 322 LVN 324



 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 1/150 (0%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+S+ +  ++    K+G       +  +M   G +    T+  LI+ Y K +    A  V
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 120 YEEMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            + M E   +  +  +Y+ L++ L     ++         +   + PDV T+ ILI+  C
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +A +   A+ + + M   G+ PD    +TL
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTL 252


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 119/200 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++  + + P+++TY T+I G+C +  L EAV L  ++    + P+  TF+ILID
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID 287

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  KEG+M  A ++ + M++   K +VVTY+ L+DGYF    +K A  V+  M ++ ++P
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + SY+I+IDGLCK  +++EA+  F      +++P+ +T+  LI G CK+GR      L 
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M     + D +  S+L D
Sbjct: 408 DKMRDRSQLADVITYSSLID 427



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 108/190 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +   G+ P + +Y  +I G C    +DEA+ LFE++    + PN+ITF  LID  C
Sbjct: 336 VFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLC 395

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+     +  KM ++   A+V+TYS LID   K+ ++  A  ++++M    I P++ 
Sbjct: 396 KSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMY 455

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ILIDGLCK G ++ A   F   L      D+ TY ++I G+CKAG   EA+ L   M
Sbjct: 456 TYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKM 515

Query: 194 LRNGIMPDGL 203
             NG +P+ +
Sbjct: 516 EDNGCIPNAI 525



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 100/190 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALK    +     + D I+Y T+I G C +     A+QL   L    +KP+ + + I+ID
Sbjct: 158 ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIID 217

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK   + +A  ++S+M  K    NVVTY+ LI G+     +  A  +  EM   NI+P
Sbjct: 218 SLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINP 277

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ ++SILID L K G M+ A       +  ++ PDVVTY  L+ GY        A  ++
Sbjct: 278 DVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVF 337

Query: 191 DSMLRNGIMP 200
           +SM ++G+ P
Sbjct: 338 NSMAQSGVTP 347



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  +   +  RG  PD+IT  T+I G C    + +A++  + +  ++ + + 
Sbjct: 115 CHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDR 174

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           I++  LI+  CK G    A  +   + E+  K +VV Y+ +ID   K++ +  A ++Y E
Sbjct: 175 ISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSE 234

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+Y+ LI G C  G + EA+   +     ++ PDV T++ILI    K G+
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGK 294

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  +   M++  + PD +  ++L D
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVD 322



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 99/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A+ L   L  +G+  D++T N +I  +C L ++  +  +   +      P+
Sbjct: 79  LVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPD 138

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT T LI   C  G +  A      ++    + + ++Y  LI+G  K    K+A  +  
Sbjct: 139 VITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMR 198

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + E +I P++V Y+I+ID LCK  L+ EA   +       + P+VVTY  LI G+C  G
Sbjct: 199 NLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMG 258

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA+ L + M    I PD    S L D
Sbjct: 259 CLIEAVALLNEMKLKNINPDVYTFSILID 287



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 93/198 (46%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF ++      P    +N I+     + R   A+ L + L    +  + +T  ILI+
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  G++  +  + + +L++G   +V+T + LI G      +K A   ++++       
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + +SY  LI+GLCK G  + A+       +  + PDVV Y I+I   CK     EA  LY
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M    I P+ +  +TL
Sbjct: 233 SEMNAKQIYPNVVTYTTL 250



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           Y + N  ++AV LF ++  ++  P +  F  ++ +  K  R   A  +   +  KG  ++
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           +VT + LI+ +     +  +F V   + +    P++++ + LI GLC RG +++AL  FH
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKAL-KFH 162

Query: 157 ---CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               AL+  L  D ++Y  LI G CK G    A+QL  ++    I PD ++ + + D
Sbjct: 163 DDVVALEFQL--DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIID 217


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 119/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LDA   L+ +++D G++PD+ TY  +I G+C   R++ AV++F ++    + PN++ FT 
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CKEG ++    ++  M  +G   ++V Y+ L++G  +++N+K+A  + EEM    
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+Y+ LIDG CK G ++ A+       +  +  D VTY  LI G  KAGRP +A 
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++   M+   + PD    + + D
Sbjct: 416 RVLREMMEAALEPDNTTYTMVID 438



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 111/192 (57%), Gaps = 1/192 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   L +A K+F ++  R ++P ++T+NT+I G C    LD    L+++++ V +KP+
Sbjct: 196 FVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPD 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI  FC+ GRM++A  MF++M + G   N V ++ LID + K  N+ +  D+Y+
Sbjct: 255 VYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQ 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P++V+Y+ L++GLC+   ++ A        +  L PD VTY  LI G CK G
Sbjct: 315 DMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDG 374

Query: 182 RPTEAMQLYDSM 193
           +   AM +   M
Sbjct: 375 KLDMAMDIKQKM 386



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++A + L+  +  RG+ PD++ YN ++ G C    L  A  + E++    LKP+ +
Sbjct: 302 KEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CK+G++D A  +  KM EK    + VTY+ LI G  K+     A  V  EM
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREM 421

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+++ID  C++G ++          +    P VVTY +++ G CK G+ 
Sbjct: 422 MEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQM 481

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L  +ML  G+ PD +  + L D
Sbjct: 482 KNADMLLHAMLNIGVSPDDITYNILLD 508



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 118/207 (57%), Gaps = 3/207 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  +L AA  +  ++ + GL+PD +TY T+I G C   +LD A+ + +K+   ++  +
Sbjct: 335 LCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLD 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    K GR  DA  +  +M+E   + +  TY+ +ID + +  ++K+ F + +
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P +V+Y+++++GLCK G M+ A    H  L+  + PD +TY IL+ G CK G
Sbjct: 455 EMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   + +L  S    G++PD  + ++L
Sbjct: 515 KVANSEELESS---KGMVPDFAVYTSL 538



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   + QL D G+ P+   +N ++  +  L  L  A ++F+++    ++P  +TF  LI 
Sbjct: 170 AYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLIS 228

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+   +D    ++ +M + G K +V TY  LI G+ ++  M++A  ++ EM +  ++P
Sbjct: 229 GMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNP 288

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V ++ LID  CK G +   +  +       ++PD+V Y  L+ G C+A     A  + 
Sbjct: 289 NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV 348

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M   G+ PD +  +TL D
Sbjct: 349 EEMKNAGLKPDKVTYTTLID 368


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 125/207 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++ AA K F ++  +GL+P+I+TYN++I G C+  +L+EA+ L++K+  + LKPN +
Sbjct: 285 KDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIV 344

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK+  M +AT +F  + ++    NV+T++ +ID Y K   M+  F +   M
Sbjct: 345 TYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I PN+ +Y+ LI GLC++  ++ A    +   +  L  DVVTY ILI G CK  + 
Sbjct: 405 LDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKS 464

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L + M   G+ P+ +  +TL D
Sbjct: 465 RNAEKLLNEMFNLGLKPNHVTYNTLMD 491



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 111/183 (60%), Gaps = 3/183 (1%)

Query: 22  GLEPDIITYNTIICGYC---SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           G+ P+++TYNT++ GYC   S  ++ +A    +++   ++ PN +TF  LID FCK+  +
Sbjct: 230 GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENV 289

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
             A   F +M ++G K N+VTY+ LI+G   +  ++ A D++++M    + PNIV+Y+ L
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I+G CK+ +M+EA   F       L+P+V+T+  +I  YCK G   E   L  SML  GI
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409

Query: 199 MPD 201
           +P+
Sbjct: 410 LPN 412



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 116/194 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ L+ ++   GL+P+I+TYN +I G+C    + EA ++F+ ++  +L PN ITF  
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +IDA+CKEG M++   + S ML++G   NV TY+CLI G  + Q++++A ++  EM    
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  ++V+Y+ILIDGLCK      A    +   +  L P+ VTY  L+ GYC  G+   A+
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 188 QLYDSMLRNGIMPD 201
            +   M +    P+
Sbjct: 504 NVRTRMEKERKQPN 517



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 109/186 (58%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ +T+NT+I G+C    +  A + FE++    LKPN +T+  LI+  C  G++++A  +
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + KM+  G K N+VTY+ LI+G+ K + MK A  V++++ +  + PN+++++ +ID  CK
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G+MEE        LD  +LP+V TY  LI G C+      A +L + M   G+  D + 
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450

Query: 205 LSTLAD 210
            + L D
Sbjct: 451 YNILID 456



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  +     ++ ++  R +  ++ T+N  I G C   +L++A    E +    + PN
Sbjct: 175 LVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPN 234

Query: 62  SITFTILIDAFCKEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +T+  L+D +CK G   +M  A     +ML      N VT++ LIDG+ K +N+ +A  
Sbjct: 235 VVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKK 294

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            +EEM +  + PNIV+Y+ LI+GLC  G +EEA+  +   +   L P++VTY  LI G+C
Sbjct: 295 AFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFC 354

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K     EA +++D + +  ++P+ +  +T+ D
Sbjct: 355 KKKMMKEATKVFDDVSKQELVPNVITFNTMID 386



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A K+F  ++ + L P++IT+NT+I  YC    ++E   L   +    + PN  
Sbjct: 355 KKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVS 414

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   C++  +  A  + ++M  KG K +VVTY+ LIDG  K+   ++A  +  EM
Sbjct: 415 TYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM 474

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN V+Y+ L+DG C  G ++ AL            P+VVTY +LI+GYCK  + 
Sbjct: 475 FNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKL 534

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A  L + ML  G+ P+
Sbjct: 535 EAANGLLNEMLEKGLNPN 552



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L  A + F +  D G +  + + N ++      N++ +   +++++   ++  N 
Sbjct: 141 VKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNL 200

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK---SQNMKSAFDV 119
            TF I I+  C+ G+++ A      M   G   NVVTY+ L+DGY K   +  M  A   
Sbjct: 201 NTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAF 260

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +EM  N I PN V+++ LIDG CK   +  A  AF       L P++VTY  LI G C 
Sbjct: 261 MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCN 320

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G+  EA+ L+D M+  G+ P+
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPN 342



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 90/170 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++    L   + D G+ P++ TYN +I G C    L  A +L  ++    LK + +
Sbjct: 390 KEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILID  CK  +  +A  + ++M   G K N VTY+ L+DGY     +K+A +V   M
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
            +    PN+V+Y++LI G CK   +E A    +  L+  L P+  TY I+
Sbjct: 510 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 88/146 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L AA +L  ++ ++GL+ D++TYN +I G C  ++   A +L  ++  + LKPN
Sbjct: 423 LCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 482

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D +C EG++  A  + ++M ++  + NVVTY+ LI GY K   +++A  +  
Sbjct: 483 HVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLN 542

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM E  ++PN  +Y I+   + ++G 
Sbjct: 543 EMLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A  KE ++ D   ++ +M+++    N+ T++  I+G  ++  +  A D  E+M    
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 128 ISPNIVSYSILIDGLCKR---GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ISPN+V+Y+ L+DG CKR   G M +A       L N + P+ VT+  LI G+CK     
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            A + ++ M + G+ P+ +  ++L +  L ++G  E  I
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLIN-GLCNNGKLEEAI 328



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 3/152 (1%)

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++   +L+ A+ K   +  A   F++  + G K ++ + + L+    K   +     VY+
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK-- 179
           EM +  I  N+ +++I I+GLC+ G + +A  A        + P+VVTY  L+ GYCK  
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249

Query: 180 -AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            AG+  +A      ML N I P+ +  +TL D
Sbjct: 250 SAGKMYKAEAFMKEMLANKICPNEVTFNTLID 281



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +D+F K  +   +++  S +L+ G P A  +    L+  Y K+  +  A++ +    + 
Sbjct: 100 FLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDY 159

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               ++ S + L+  L K   + +  Y +   +   +  ++ T+ I I G C+AG+  +A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
               + M   GI P+ +  +TL D
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVD 243


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 115/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  +D A     ++ + G  PD +T+NT+I GYC   RL EA ++ ++++   LK NS
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T   ++   C E ++DDA  + S   ++G   + V+Y  LI GYFK      A  +++E
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  I P+I++Y+ +I GLC  G  ++++   +  L++ L+PD  TY  +I GYC+ G+
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A Q ++ M++    PD
Sbjct: 578 VEKAFQFHNKMVKKSFKPD 596



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 115/208 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+  L+ A  L   + + GL P+  T+N ++ GYC L  L EA Q+ + +    + P
Sbjct: 256 VLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLP 315

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+ +LI   CK+G++D+A  +  +M       +VVTY+ LI+G F   +    F++ 
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELI 375

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M    + PN V+Y++++    K G M+ A        ++   PD VT+  LI GYCKA
Sbjct: 376 DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKA 435

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GR +EA ++ D M R G+  + + L+T+
Sbjct: 436 GRLSEAFRMMDEMSRKGLKMNSVTLNTI 463



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A +L  ++ +  L PD++TYNT+I G    +   +  +L +K+    +KPN
Sbjct: 327 LCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPN 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ +++  + KEG+MD+A     KM E G   + VT++ LI+GY K+  +  AF + +
Sbjct: 387 AVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMD 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N V+ + ++  LC    +++A      A       D V+Y  LI GY K G
Sbjct: 447 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDG 506

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EAM+L+D M    I+P  +  +T+
Sbjct: 507 KSVEAMKLWDEMKEKEIIPSIITYNTM 533



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD A KL    + RG   D ++Y T+I GY    +  EA++L++++   ++ P+ IT
Sbjct: 470 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIIT 529

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +I   C  G+ D +    +++LE G   +  TY+ +I GY +   ++ AF  + +M 
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           + +  P++ + +IL+ GLC  G++++AL  F+  +      D VTY  +I G CK  R  
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649

Query: 185 EAMQLYDSMLRNGIMPD----GLLLSTLAD 210
           EA  L   M    + PD      +LS LAD
Sbjct: 650 EAFDLLAEMEEKKLGPDCYTYNAILSALAD 679



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 109/199 (54%), Gaps = 2/199 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +   G++ +  T+N +I G C  N+L EA+ L  K+      P+++++  ++D  C
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K+G++++A  +   M   G   N  T++ L+ GY K   +K A  V + M +NN+ P++ 
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           +Y++LI GLCK G ++EA +     ++N  LLPDVVTY  LI G        +  +L D 
Sbjct: 319 TYNMLIGGLCKDGKIDEA-FRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDK 377

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M   G+ P+ +  + +  +
Sbjct: 378 MEGKGVKPNAVTYNVVVKW 396



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 26/219 (11%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH    D ++    +L + GL PD  TYNTII GYC   ++++A Q   K+     KP+ 
Sbjct: 538 CHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDL 597

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  IL+   C EG +D A  +F+  + KG   + VTY+ +I G  K    + AFD+  E
Sbjct: 598 FTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAE 657

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA------------LYAFHCALDNHLL------ 164
           M E  + P+  +Y+ ++  L   G M+EA            L     +L+   +      
Sbjct: 658 MEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSET 717

Query: 165 -----PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                P+ VT++  I   C  G+  +AM +     + GI
Sbjct: 718 SQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGI 756



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICG---YCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           A ++F ++    L+P+++T NT+I     Y S   +  +  +F  +  + +K N+ TF I
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C E ++ +A  +  KM +     + V+Y+ ++D   K   +  A D+  +M  N 
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  +++IL+ G CK G ++EA         N++LPDV TY +LI G CK G+  EA 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L D M    ++PD +  +TL
Sbjct: 338 RLKDEMENLKLLPDVVTYNTL 358



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 96/191 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL+ ++ ++ + P IITYNT+I G C   + D+++    +L    L P+  T+  +I 
Sbjct: 511 AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIIL 570

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+EG+++ A    +KM++K  K ++ T + L+ G      +  A  ++        + 
Sbjct: 571 GYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAI 630

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ +I GLCK    EEA        +  L PD  TY  ++     AGR  EA +  
Sbjct: 631 DAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFM 690

Query: 191 DSMLRNGIMPD 201
             ++  G + D
Sbjct: 691 SRIVEQGKLQD 701



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 3/177 (1%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD---ATMM 84
           +  +T I  Y + NR   A Q+F ++  + LKPN +T   LI+A  +         +  +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           FS +++ G K N  T++ LI G      +  A  +  +M + +  P+ VSY+ ++D LCK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +G + EA        +N LLP+  T+ IL+ GYCK G   EA Q+ D M +N ++PD
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPD 316



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  LD ALKLF     +G   D +TYNTII G C  +R +EA  L  ++   +L P+
Sbjct: 607 LCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPD 666

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-----------------------KANVV 98
             T+  ++ A    GRM +A    S+++E+G                          N V
Sbjct: 667 CYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSV 726

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           T+S  I+        K A  + +E  +  I+ +  +Y  L++GL KR
Sbjct: 727 TFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKR 773


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 122/208 (58%), Gaps = 3/208 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE     A+KL+ ++T R ++PD+ TYN++I G C   R+DEA Q+ + +      P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  LI+ FCK  R+D+ T +F +M ++G   + +TY+ +I GYF++    +A +++
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M   +  PNI +YSIL+ GLC    +E+AL  F     + +  D+ TY I+I G CK 
Sbjct: 373 SRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   +A  L+ S+   G+ PD +  +T+
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTM 457



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 115/205 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G  PD++ YNTII G C +  +++AV+LF+++    ++ +++T+  L+ 
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  DA  +   M+ +    NV+T++ +ID + K      A  +YEEM    + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ LI+GLC  G ++EA       +    LPDVVTY  LI G+CK+ R  E  +L+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
             M + G++ D +  +T+     Q+
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQA 362



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 111/200 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL + G++   G EPD++T +++I G+C  NR+ +A+ L  K+  +  +P+ + +  +ID
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G ++DA  +F +M   G +A+ VTY+ L+ G   S     A  +  +M   +I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++++ +ID   K G   EA+  +       + PDV TY  LI G C  GR  EA Q+ 
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+  G +PD +  +TL +
Sbjct: 303 DLMVTKGCLPDVVTYNTLIN 322



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 101/186 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A++LF ++   G+  D +TYN+++ G C   R  +A +L   +    + PN ITFT 
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID F KEG+  +A  ++ +M  +    +V TY+ LI+G      +  A  + + M    
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y+ LI+G CK   ++E    F       L+ D +TY  +I+GY +AGRP  A 
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369

Query: 188 QLYDSM 193
           +++  M
Sbjct: 370 EIFSRM 375



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  + D  + LF  +   G+  D+ +YN +I   C  +R   A+ +  K+     +P+
Sbjct: 79  IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + LI+ FC+  R+ DA  + SKM E G + +VV Y+ +IDG  K   +  A ++++
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + +  + V+Y+ L+ GLC  G   +A       +   ++P+V+T+  +I  + K G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + +EAM+LY+ M R  + PD    ++L +
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+  + LF ++      P I+ ++ ++         D  + LF  +    +  +  ++ 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I+  C+  R   A  +  KM++ G + +VVT S LI+G+ +   +  A D+  +M E 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V Y+ +IDG CK GL+ +A+  F     + +  D VTY  L+ G C +GR ++A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   M+   I+P+ +  + + D
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVID 252



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL LF  +    +E DI TYN +I G C +  +++A  LF  L+C  LKP+ +++T
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKG 92
            +I  FC++ + D + +++ KM E G
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDG 481



 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 35/136 (25%)

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH----CALDNHLL- 164
           S N++   D++ +M ++   P+IV +S ++  + K    +  +  FH    C + + L  
Sbjct: 47  SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106

Query: 165 ------------------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
                                         PDVVT + LI G+C+  R  +A+ L   M 
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166

Query: 195 RNGIMPDGLLLSTLAD 210
             G  PD ++ +T+ D
Sbjct: 167 EMGFRPDVVIYNTIID 182


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 118/201 (58%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKP 60
           L K   +  A ++  ++  +G +P++ T+ ++I G C     ++A +LF KL   +  KP
Sbjct: 285 LCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKP 344

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T +I  +C+E +++ A M+ S+M E+G   N  TY+ LIDG+ K+ N + A+D+ 
Sbjct: 345 NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLM 404

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M     SPN+ +Y+ +++GLCKRG ++EA         N L PD  TY IL+  +CK 
Sbjct: 405 NLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQ 464

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
               +A+ L++ ML+ GI PD
Sbjct: 465 ENIRQALALFNKMLKIGIQPD 485



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 108/206 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + A  L   ++  G  P++ TYN I+ G C   R+ EA ++ E      LKP+  
Sbjct: 393 KAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKF 452

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+   CK+  +  A  +F+KML+ G + ++ +Y+ LI  + +   MK +   +EE 
Sbjct: 453 TYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEA 512

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P   +Y+ +I G C+ G +  A+  FH   D+   PD +TY  +I G CK  + 
Sbjct: 513 VRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKR 572

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA  LYDSM+  G++P  +   TLA
Sbjct: 573 DEARSLYDSMIEKGLVPCEVTRITLA 598



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 3/199 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++  RG++PD I+Y  ++  YC +  + EA +    +       ++ TFT++I  F 
Sbjct: 192 LFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFS 251

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            +G    A   F ++++ G + N++ ++C+I+G  K  ++K AF++ EEM      PN+ 
Sbjct: 252 GKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVY 311

Query: 134 SYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +++ LIDGLCK+G  E+A   F   +  +NH  P+V+TY  +I GYC+  +   A  L  
Sbjct: 312 THTSLIDGLCKKGWTEKAFRLFLKLVRSENHK-PNVLTYTAMISGYCREDKLNRAEMLLS 370

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M   G++P+    +TL D
Sbjct: 371 RMKEQGLVPNTNTYTTLID 389



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 104/200 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L+ A  L  ++ ++GL P+  TY T+I G+C     + A  L   ++     PN  
Sbjct: 358 REDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK GR+ +A  M     + G K +  TY+ L+  + K +N++ A  ++ +M
Sbjct: 418 TYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM 477

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P+I SY+ LI   C+   M+E+   F  A+   ++P   TY  +I GYC+ G  
Sbjct: 478 LKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNL 537

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
           T AM+ +  +  +G  PD +
Sbjct: 538 TLAMKFFHRLSDHGCAPDSI 557



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 110/200 (55%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+   + A +LF +L      +P+++TY  +I GYC  ++L+ A  L  ++    L P
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+T LID  CK G  + A  + + M  +G   N+ TY+ +++G  K   ++ A+ + 
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E+  +N + P+  +Y+IL+   CK+  + +AL  F+  L   + PD+ +Y  LI  +C+ 
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            R  E+   ++  +R GI+P
Sbjct: 500 NRMKESEMFFEEAVRIGIIP 519



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 92/178 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A K+       GL+PD  TYN ++  +C    + +A+ LF K+  + ++P+
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++T LI  FC+E RM ++ M F + +  G      TY+ +I GY +  N+  A   + 
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            + ++  +P+ ++Y  +I GLCK+   +EA   +   ++  L+P  VT   L   YCK
Sbjct: 546 RLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 103/190 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A+++  ++ ++GL P+  T N II     +  ++ A  LFE++    ++P+SI++ 
Sbjct: 150 RLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYR 209

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +++  +CK G + +A    S MLE+G   +  T++ +I  +        A   +  + + 
Sbjct: 210 VMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDM 269

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++++ +I+GLCKRG +++A       +     P+V T+  LI G CK G   +A
Sbjct: 270 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKA 329

Query: 187 MQLYDSMLRN 196
            +L+  ++R+
Sbjct: 330 FRLFLKLVRS 339



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 3/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L G   +R  E        ++  +  + RL EAV++  ++    L PN+ T   +I 
Sbjct: 122 AMSLIG---NRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIK 178

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              + G ++ A ++F +M  +G + + ++Y  ++  Y K  N+  A      M E     
Sbjct: 179 VTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVV 238

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +++++I     +G    AL+ F   +D  L P+++ +  +I G CK G   +A ++ 
Sbjct: 239 DNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEML 298

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M+  G  P+    ++L D
Sbjct: 299 EEMVGKGWKPNVYTHTSLID 318


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A +L  ++  RG+ PD ITY ++I G+C  N LD+A Q+ + +      PN
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+ +CK  R+DD   +F KM  +G  A+ VTY+ LI G+ +   +  A ++++
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PNIV+Y IL+DGLC  G  E+AL  F     + +  D+  Y I+I G C A 
Sbjct: 561 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 620

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A  L+ S+   G+ P
Sbjct: 621 KVDDAWDLFCSLPLKGVKP 639



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 124/222 (55%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF ++  +G+  +IITYN +I G+C+  R D+  +L   +   ++ PN
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 430

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LID+F KEG++ +A  +  +M+ +G   + +TY+ LIDG+ K  ++  A  + +
Sbjct: 431 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNI +++ILI+G CK   +++ L  F       ++ D VTY  LI+G+C+ G
Sbjct: 491 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 550

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +   A +L+  M+   + P+ +    L D  L  +G  E  +
Sbjct: 551 KLNVAKELFQEMVSRKVPPNIVTYKILLD-GLCDNGESEKAL 591



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 118/206 (57%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+L  ++ + G +PD+IT NT++ G C   +  EA+ L +K+     +PN++T
Sbjct: 269 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 328

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +++  CK G+   A  +  KM E+  K + V YS +IDG  K  ++ +AF+++ EM 
Sbjct: 329 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 388

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I+ NI++Y+ILI G C  G  ++        +   + P+VVT+++LI  + K G+  
Sbjct: 389 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 448

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +L+  M+  GI PD +  ++L D
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLID 474



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 116/210 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A    G++   G EP+ IT++T+I G C   R+ EA++L +++  +  KP+ IT   L++
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G+  +A ++  KM+E G + N VTY  +++   KS     A ++  +M E NI  
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V YSI+IDGLCK G ++ A   F+      +  +++TY ILI G+C AGR  +  +L 
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M++  I P+ +  S L D  ++    +E
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 116/207 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  L+LF +++ RG+  D +TYNT+I G+C L +L+ A +LF+++   ++ PN +
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G  + A  +F K+ +   + ++  Y+ +I G   +  +  A+D++  +
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 632

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P + +Y+I+I GLCK+G + EA   F    ++   PD  TY ILIR +   G  
Sbjct: 633 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 692

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           T++++L + + R G   D   +  + D
Sbjct: 693 TKSVKLIEELKRCGFSVDASTIKMVID 719



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G +P+ +TY  ++   C   +   A++L  K+    +K +++ ++I+ID
Sbjct: 310 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G +D+A  +F++M  KG   N++TY+ LI G+  +        +  +M +  I+P
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V++S+LID   K G + EA       +   + PD +TY  LI G+CK     +A Q+ 
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489

Query: 191 DSMLRNGIMPD 201
           D M+  G  P+
Sbjct: 490 DLMVSKGCDPN 500



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 81/162 (50%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           + D+A+ LF  +   +  P  I F+ L  A  K  + D    +  +M  KG   N+ T S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+ + + + +  AF    ++ +    PN +++S LI+GLC  G + EAL      ++ 
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
              PD++T   L+ G C +G+  EAM L D M+  G  P+ +
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 327



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 96/202 (47%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF  +      P +I ++ +        + D  + L +++    +  N  T +I+
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  ++  A     K+++ G + N +T+S LI+G      +  A ++ + M E   
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++++ + L++GLC  G   EA+      ++    P+ VTY  ++   CK+G+   AM+
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M    I  D +  S + D
Sbjct: 348 LLRKMEERNIKLDAVKYSIIID 369



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL++F ++    +E DI  YN II G C+ +++D+A  LF  L    +KP   T+ I+
Sbjct: 588 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 647

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK+G + +A ++F KM E G   +  TY+ LI  +    +   +  + EE+     
Sbjct: 648 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 707

Query: 129 SPNIVSYSILIDGL 142
           S +  +  ++ID L
Sbjct: 708 SVDASTIKMVIDML 721


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A +L  ++  RG+ PD ITY ++I G+C  N LD+A Q+ + +      PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+ +CK  R+DD   +F KM  +G  A+ VTY+ LI G+ +   +  A ++++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PNIV+Y IL+DGLC  G  E+AL  F     + +  D+  Y I+I G C A 
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A  L+ S+   G+ P
Sbjct: 523 KVDDAWDLFCSLPLKGVKP 541



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 124/222 (55%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF ++  +G+  +IITYN +I G+C+  R D+  +L   +   ++ PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LID+F KEG++ +A  +  +M+ +G   + +TY+ LIDG+ K  ++  A  + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNI +++ILI+G CK   +++ L  F       ++ D VTY  LI+G+C+ G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +   A +L+  M+   + P+ +    L D  L  +G  E  +
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLD-GLCDNGESEKAL 493



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 118/206 (57%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+L  ++ + G +PD+IT NT++ G C   +  EA+ L +K+     +PN++T
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +++  CK G+   A  +  KM E+  K + V YS +IDG  K  ++ +AF+++ EM 
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I+ NI++Y+ILI G C  G  ++        +   + P+VVT+++LI  + K G+  
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +L+  M+  GI PD +  ++L D
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLID 376



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 116/210 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A    G++   G EP+ IT++T+I G C   R+ EA++L +++  +  KP+ IT   L++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G+  +A ++  KM+E G + N VTY  +++   KS     A ++  +M E NI  
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V YSI+IDGLCK G ++ A   F+      +  +++TY ILI G+C AGR  +  +L 
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M++  I P+ +  S L D  ++    +E
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 122/217 (56%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  L+LF +++ RG+  D +TYNT+I G+C L +L+ A +LF+++   ++ PN +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G  + A  +F K+ +   + ++  Y+ +I G   +  +  A+D++  +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P + +Y+I+I GLCK+G + EA   F    ++   PD  TY ILIR +   G  
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594

Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
           T++++L + + R G   D     +++  L+D  L+ S
Sbjct: 595 TKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKS 631



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G +P+ +TY  ++   C   +   A++L  K+    +K +++ ++I+ID
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G +D+A  +F++M  KG   N++TY+ LI G+  +        +  +M +  I+P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V++S+LID   K G + EA       +   + PD +TY  LI G+CK     +A Q+ 
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391

Query: 191 DSMLRNGIMPD 201
           D M+  G  P+
Sbjct: 392 DLMVSKGCDPN 402



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 81/162 (50%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           + D+A+ LF  +   +  P  I F+ L  A  K  + D    +  +M  KG   N+ T S
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+ + + + +  AF    ++ +    PN +++S LI+GLC  G + EAL      ++ 
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
              PD++T   L+ G C +G+  EAM L D M+  G  P+ +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 96/202 (47%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF  +      P +I ++ +        + D  + L +++    +  N  T +I+
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  ++  A     K+++ G + N +T+S LI+G      +  A ++ + M E   
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++++ + L++GLC  G   EA+      ++    P+ VTY  ++   CK+G+   AM+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M    I  D +  S + D
Sbjct: 250 LLRKMEERNIKLDAVKYSIIID 271



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 51/112 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  LF  L  +G++P + TYN +I G C    L EA  LF K+      P+  T+ I
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           LI A   +G    +  +  ++   G   +  T   +ID     +  KS  D+
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 122/208 (58%), Gaps = 3/208 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE     A+KL+ ++T R ++PD+ TYN++I G C   R+DEA Q+ + +      P
Sbjct: 194 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  LI+ FCK  R+D+ T +F +M ++G   + +TY+ +I GYF++    +A +++
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M   +  PNI +YSIL+ GLC    +E+AL  F     + +  D+ TY I+I G CK 
Sbjct: 314 SRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 370

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   +A  L+ S+   G+ PD +  +T+
Sbjct: 371 GNVEDAWDLFRSLSCKGLKPDVVSYTTM 398



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 115/206 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ + G  PD++ YNTII G C +  +++AV+LF+++    ++ +++T+  L+ 
Sbjct: 99  AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 158

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  DA  +   M+ +    NV+T++ +ID + K      A  +YEEM    + P
Sbjct: 159 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 218

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ LI+GLC  G ++EA       +    LPDVVTY  LI G+CK+ R  E  +L+
Sbjct: 219 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 278

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSS 216
             M + G++ D +  +T+     Q+ 
Sbjct: 279 REMAQRGLVGDTITYNTIIQGYFQAG 304



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 110/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL + G++   G EPD++T +++I G+C  NR+ +A+ L  K+  +  +P+ + +  +ID
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G ++DA  +F +M   G +A+ VTY+ L+ G   S     A  +  +M   +I P
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++++ +ID   K G   EA+  +       + PDV TY  LI G C  GR  EA Q+ 
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M+  G +PD +  +TL
Sbjct: 244 DLMVTKGCLPDVVTYNTL 261



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 101/186 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A++LF ++   G+  D +TYN+++ G C   R  +A +L   +    + PN ITFT 
Sbjct: 131 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 190

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID F KEG+  +A  ++ +M  +    +V TY+ LI+G      +  A  + + M    
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y+ LI+G CK   ++E    F       L+ D +TY  +I+GY +AGRP  A 
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 310

Query: 188 QLYDSM 193
           +++  M
Sbjct: 311 EIFSRM 316



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  + D  + LF  +   G+  D+ +YN +I   C  +R   A+ +  K+     +P+
Sbjct: 20  IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + LI+ FC+  R+ DA  + SKM E G + +VV Y+ +IDG  K   +  A ++++
Sbjct: 80  VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + +  + V+Y+ L+ GLC  G   +A       +   ++P+V+T+  +I  + K G
Sbjct: 140 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + +EAM+LY+ M R  + PD    ++L
Sbjct: 200 KFSEAMKLYEEMTRRCVDPDVFTYNSL 226



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 99/196 (50%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I+ ++ ++         D  + LF  +    +  +  ++ I+I+  C+  R   A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             KM++ G + +VVT S LI+G+ +   +  A D+  +M E    P++V Y+ +IDG CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL+ +A+  F     + +  D VTY  L+ G C +GR ++A +L   M+   I+P+ + 
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 205 LSTLADYNLQSSGSQE 220
            + + D  ++     E
Sbjct: 188 FTAVIDVFVKEGKFSE 203



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 52/86 (60%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL LF  +    +E DI TYN +I G C +  +++A  LF  L+C  LKP+ +++T
Sbjct: 337 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 396

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKG 92
            +I  FC++ + D + +++ KM E G
Sbjct: 397 TMISGFCRKRQWDKSDLLYRKMQEDG 422



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 61/123 (49%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M++  P  ++V +S ++    KS+N      ++  M    I  ++ SY+I+I+ LC+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
              AL      +     PDVVT + LI G+C+  R  +A+ L   M   G  PD ++ +T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 208 LAD 210
           + D
Sbjct: 121 IID 123


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 114/201 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++   +   G+E D+ TYNT+ CG    NR+DEA  L   +    ++PN +++T 
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 393

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C EG M +A  +F +M   G + ++VTY+ ++DGY K  +++ A    +EM +  
Sbjct: 394 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKG 453

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I SY+ L+ G C  G ++ AL  F         P++V Y  LI G  K GR  EA 
Sbjct: 454 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           QLYD+ML +G+ PD  L S L
Sbjct: 514 QLYDNMLGDGLTPDDALYSAL 534



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 35/223 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  + L  D+  Y+++I  YC    +  A ++F++     ++PN  T+  LI+ FC
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY-------------------------- 107
           K G+M+ A M+ + M  +G   N + ++ +IDGY                          
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 108 ---------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
                     ++  M  A ++   M E  + PN VSY+ LI   C  G M EA   F   
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             N   P +VTY +++ GY K G   EA +    M + G++PD
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPD 457



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 5/207 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIIT---YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           HLD A  L  Q       PD +T    + ++ GYC   R+  A QL +++    +K N++
Sbjct: 122 HLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  L+DA+ +E   D    M   M  +G +  V TY+ L+DG   ++++     V+EEM
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N+S ++  YS +I+  C+ G +  A   F   + N + P+  TY  LI G+CK G+ 
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 299

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L   M   G+  + ++ +T+ D
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMID 326



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 72/132 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++   G EP ++TYN ++ GY     + EA +  +++    L P+  ++  L+ 
Sbjct: 407 ARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVH 466

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++D A  +F +M ++G K N+V Y+ LI G  K    + AF +Y+ M  + ++P
Sbjct: 467 GHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTP 526

Query: 131 NIVSYSILIDGL 142
           +   YS L+  L
Sbjct: 527 DDALYSALVGSL 538



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 103/205 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E   D   ++   + + G+EP + TY  ++ G  +   + +   +FE++    L  +  
Sbjct: 190 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ +I+A+C+ G +  A+ +F + +  G + N  TY  LI+G+ K   M++A  +  +M
Sbjct: 250 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 309

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N + ++ +IDG C++ ++++AL          +  DV TY  L  G  +A R 
Sbjct: 310 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L   M+  G+ P+ +  +TL
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTL 394



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK+  +  A +   ++  +GL PDI +Y  ++ G+C   ++D A++LFE++     KPN 
Sbjct: 434 IKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNL 493

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF--KSQNMK 114
           + +T LI    KEGR ++A  ++  ML  G   +   YS L+      K QN+K
Sbjct: 494 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVK 547


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 114/200 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A    G + + G++P+++TYNT+I GYCS  R++ A  + + +    ++P
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP 304

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S T+  LI   CK G++++A+ +  KM E G     VTY+ LIDGY    ++  AF   
Sbjct: 305 DSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYR 364

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    I P + +Y++LI  L   G M+EA        D+ ++PD +TY ILI GYC+ 
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC 424

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G   +A  L+D M+  GI P
Sbjct: 425 GNAKKAFNLHDEMISKGIQP 444



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +D A  +   + D G+ PD ITYN +I GYC      +A  L +++    ++P 
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPT 445

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    K  RM  A  +F K++ +G   +++ ++ LIDG+  + N+  AF + +
Sbjct: 446 LVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLK 505

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + NI P+ V+Y+ L+ G C+ G +EEA           + PD ++Y  LI GY K G
Sbjct: 506 EMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRG 565

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A  + D ML  G  P      TL  YN
Sbjct: 566 DINDAFTIRDEMLSIGFNP------TLLTYN 590



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 70/272 (25%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +   + +RG+EPD  TY ++I G C   +L+EA  + EK+  + L P ++T+ 
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 67  ILIDAFCK-----------------------------------EGRMDDATMMFSKMLEK 91
            LID +C                                    EG+MD+A  M   M + 
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   + +TY+ LI+GY +  N K AF++++EM    I P +V+Y+ LI  L KR  M+ A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 152 ---------------LYAFHCALDNH--------------------LLPDVVTYAILIRG 176
                          L  F+  +D H                    ++PD VTY  L++G
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            C+ G+  EA +L   M R GI PD +  +TL
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTL 557



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 10/217 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           MLI+ C      D A + F  + ++G+ P I T+N ++  +  LN+ +    L+ ++  +
Sbjct: 171 MLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRL 230

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++K    TF I+I+  CKEG++  A      M   G K NVVTY+ +I GY     ++ A
Sbjct: 231 KIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA 290

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             V + M    + P+  +Y  LI G+CK G +EEA        +  LLP  VTY  LI G
Sbjct: 291 RMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDG 350

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           YC  G   +A    D M+R  I+P      T++ YNL
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILP------TVSTYNL 381



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 99/186 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   + AA  LF ++   G  PD+I +N +I G+C+   LD A  L +++    + P
Sbjct: 455 VLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP 514

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+   C+EG++++A  +  +M  +G + + ++Y+ LI GY K  ++  AF + 
Sbjct: 515 DEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIR 574

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM     +P +++Y+ LI GLCK    + A       +   + PD  TY  LI G  K 
Sbjct: 575 DEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKV 634

Query: 181 GRPTEA 186
              +EA
Sbjct: 635 DDSSEA 640



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I ++ +I   C L R D+A + F+ +    + P   TF  ++  F K  + +   +++++
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M     K+ V T++ +I+   K   +K A D    M    + PN+V+Y+ +I G C RG 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +E A        +  + PD  TY  LI G CK G+  EA  + + M   G++P  +  +T
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 208 LAD 210
           L D
Sbjct: 347 LID 349



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +SI F +LI A C+  R DDA   F  M EKG    + T++ ++  + K    ++ + +Y
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCK 179
            EM    I   + +++I+I+ LCK G +++A   F  +++N  + P+VVTY  +I GYC 
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKA-KDFIGSMENLGVKPNVVTYNTVIHGYCS 283

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            GR   A  + D M   G+ PD     +L
Sbjct: 284 RGRVEGARMVLDIMKNRGVEPDSYTYGSL 312



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 60/115 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++ A +L  ++  RG+ PD I+YNT+I GY     +++A  + +++  +   P  +
Sbjct: 528 REGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLL 587

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           T+  LI   CK  + D A  +  +M+ KG   +  TY  LI+G  K  +   A D
Sbjct: 588 TYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 44/253 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------- 54
           L K   L+ A +L G ++ RG  P+++TY+ +I G C + R+DEA +L +++T       
Sbjct: 82  LCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 141

Query: 55  --------------------------------CVQLKPNSITFTILIDAFCKEGRMDDAT 82
                                            +++ P+++TF+ LID  CK G++D+A 
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F  M+  G   NV+TY+ L++G  K+  M+ A  + E M +  ++P++++YS+L+D  
Sbjct: 202 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261

Query: 143 CKRGLMEEALYAFHCALD-----NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           CK   ++EAL   H         N L+PD VT+ ILI G CKAG   +A  L++ M+   
Sbjct: 262 CKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 321

Query: 198 IMPDGLLLSTLAD 210
           + PD +    L D
Sbjct: 322 LQPDVMTFGALID 334



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 125/227 (55%), Gaps = 6/227 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-----TCV 56
           L K   ++ A  +   + D+G+ PD+ITY+ ++  +C  +R+DEA++L   +     T  
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L P+ +TF ILI   CK G  + A+ +F +M+ K  + +V+T+  LIDG  K+  +++A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D+ + M    + PN+V+Y+ L+ GLCK G +EEA       + +  +PD +TY  L+  
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            C+A R  +A+QL   +   G  PD +  + L D  L  SG  E  I
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVD-GLWKSGKTEQAI 451



 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 4/223 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L A ++LF +L +RG  PD++TYNT+I   C    L+EA +L   ++     PN
Sbjct: 47  LCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPN 106

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
            +T+++LI+  CK GR+D+A  +  +M  K      N++TY+  +DG  K      A ++
Sbjct: 107 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 166

Query: 120 YEEMCENN--ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
              + + +  +SP+ V++S LIDGLCK G ++EA   F   +    +P+V+TY  L+ G 
Sbjct: 167 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 226

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           CKA +   A  + +SM+  G+ PD +  S L D   ++S   E
Sbjct: 227 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 269



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 117/205 (57%), Gaps = 5/205 (2%)

Query: 11  ALKLF-GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AL++F G++   G+ P I+TYNTII G C  N L   ++LFE+L      P+ +T+  LI
Sbjct: 20  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLI 79

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN--N 127
           D+ CK G +++A  +   M  +G   NVVTYS LI+G  K   +  A ++ +EM     +
Sbjct: 80  DSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 139

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILIRGYCKAGRPTE 185
           + PNI++Y+  +DGLCK+ +  EA        D  L   PD VT++ LI G CK G+  E
Sbjct: 140 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 199

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A  ++D M+  G +P+ +  + L +
Sbjct: 200 ACSVFDDMIAGGYVPNVITYNALVN 224



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 40/253 (15%)

Query: 4   KECHLDAALKLFGQLTDRG-----LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           K   +D AL+L   +  RG     L PD +T+N +I G C     ++A  LFE++    L
Sbjct: 263 KASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 322

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+ +TF  LID  CK G+++ A  +   M   G   NVVTY+ L+ G  KS  ++ A  
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382

Query: 119 VYEEMCENN-----------------------------------ISPNIVSYSILIDGLC 143
             EEM  +                                      P+ V+Y+IL+DGL 
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 442

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  E+A+      +     PD  T+A    G  ++G     M+L   +L  G++PD  
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDAT 502

Query: 204 LLSTLADYNLQSS 216
             S++ D+  +S 
Sbjct: 503 TCSSILDWVCRSG 515



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++AA  +   + + G+ P+++TYN ++ G C   R++EA Q  E++      P+
Sbjct: 336 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           SIT+  L+ A C+  R DDA  + S++   G   + VTY+ L+DG +KS   + A  V E
Sbjct: 396 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+  +++    GL + G +   +      L   +LPD  T + ++   C++G
Sbjct: 456 EMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG 515

Query: 182 R 182
           +
Sbjct: 516 K 516



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 77/149 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +   ++   G  PD ITY +++   C  +R D+A+QL  +L      P+
Sbjct: 371 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 430

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ IL+D   K G+ + A  +  +M+ KG + +  T++    G  +S N+    ++  
Sbjct: 431 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE 150
            +    + P+  + S ++D +C+ G +++
Sbjct: 491 VVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  Y+I++  LC+ G    AL  F   +  + + P +VTY  +I G CK+      M+L+
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + ++  G  PD +  +TL D
Sbjct: 61  EELVERGHHPDVVTYNTLID 80



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 35/121 (28%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +    D AL+L  +L   G +PD +TYN ++ G     + ++A+ + E++     +P+
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465

Query: 62  SITF-----------------------------------TILIDAFCKEGRMDDATMMFS 86
           S TF                                   + ++D  C+ G++DD   M  
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIK 525

Query: 87  K 87
           +
Sbjct: 526 E 526


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 122/219 (55%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A K+  ++  +G  PD  TY+ +I   C  +++++A  LFE++    + P+  T+TI
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G +  A   F +ML KG   NVVTY+ LI  Y K++ M  A +++E M    
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG 560

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA--------------FHCALDNHLLPDVVTYA 171
             PN+V+Y+ LIDG CK G +E+A  +YA              F    +N   P+V+TY 
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA R  EA +L D+ML +G  P+ ++   + D
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVID 659



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 105/187 (56%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P++ITY  ++ G C  NR+ EA +L + +     +PN I +  +ID FCK G++ DA  +
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+KM E+G   N+ TYS  ID  FK   +     V  +M EN+ +PN+V Y+ ++DGLCK
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G  +EA        +    P+VVTY  +I G+ K+G+  + ++L+  M   G  P+ + 
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793

Query: 205 LSTLADY 211
              L ++
Sbjct: 794 YRVLINH 800



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 22/222 (9%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   G+ P + TY  +I  +C    + +A + F+++      PN +T+T 
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---- 123
           LI A+ K  +M  A  +F  ML +G K NVVTY+ LIDG+ K+  ++ A  +Y  M    
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595

Query: 124 ---------------CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
                          CE    PN+++Y  L+DGLCK   ++EA       L +   P+ +
Sbjct: 596 ESSDMDKYFKLDHNNCE---GPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQI 652

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            Y  +I G+CK G+  +A +++  M   G  P+    S+  D
Sbjct: 653 VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFID 694



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 5/191 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE H     +L   +   G EP+ I Y+ +I G+C + +L +A ++F K++     PN 
Sbjct: 632 VKEAH-----ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNL 686

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++  ID   K+ R+D    + SKMLE     NVV Y+ ++DG  K      A+ +  +
Sbjct: 687 YTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLK 746

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E   +PN+V+Y+ +IDG  K G +E+ L  F         P+ +TY +LI   C  G 
Sbjct: 747 MEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGL 806

Query: 183 PTEAMQLYDSM 193
             EA +L D M
Sbjct: 807 LDEAYKLLDEM 817



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR------LDEAVQLFEKLTCVQLKPNSIT 64
           A KLF ++   G +P  + YN  I   CS         LD   + + ++  + +  N + 
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVN 427

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +      C  G+ D A  +  +M+ KG   +  TYS +I     +  ++ AF ++EEM 
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMK 487

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N I P++ +Y+ILID  CK GL+++A   F   L     P+VVTY  LI  Y KA +  
Sbjct: 488 RNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMP 547

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L++ ML  G  P+ +  + L D + ++   ++ C
Sbjct: 548 VADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC 585



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 4/214 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL  ++ ++G  P+++TY  +I G+    ++++ ++LF  +      PN IT+ +L
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVL 797

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G +D+A  +  +M +     +++++  +I+G+  SQ   ++  + +E+ EN  
Sbjct: 798 INHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENES 855

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            P    Y ILID   K G +E AL       +  +H + +   YA LI     A +  +A
Sbjct: 856 VPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKA 915

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++LY SM+   ++P+  +L  L    ++    QE
Sbjct: 916 LELYASMISKNVVPELSILVHLIKGLIKVDKWQE 949



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 92/186 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   K + ++ D G+  + +  +      C   + D+A ++  ++      P+  T++ 
Sbjct: 406 LDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSK 465

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A  +F +M   G   +V TY+ LID + K+  ++ A   ++EM    
Sbjct: 466 VIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG 525

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   M  A   F   L     P+VVTY  LI G+CKAG+  +A 
Sbjct: 526 CTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC 585

Query: 188 QLYDSM 193
           Q+Y  M
Sbjct: 586 QIYARM 591



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 41/227 (18%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + YN ++ G C  +  +EA+ +  ++      PN +T+ IL+    ++G++     +
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG--- 141
            S M+ +G   N   ++ LI  Y KS++   A+ ++++M +    P  + Y+I I     
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 142 --------------------------------------LCKRGLMEEALYAFHCALDNHL 163
                                                 LC  G  ++A       +    
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +PD  TY+ +I   C A +  +A  L++ M RNGI+P     + L D
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILID 503



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 2/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++   C     + A++   +L     KP+  T+  LI  F +  ++D A ++  +ML 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
                +  T SC      K    + AFD+ +E    +  P+ V Y+ ++ GLC+  L EE
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+   H    +  +P+VVTY IL+ G  + G+     ++   M+  G  P+  + ++L
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSL 355



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 6/208 (2%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
            L+++C      + AL+  G+L D G +P   TYN +I  +   ++LD A  +  ++   
Sbjct: 181 FLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSY 240

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
               +  T +    + CK G+  +A  +  +  +  P  + V Y+ ++ G  ++   + A
Sbjct: 241 AFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVP--DTVFYNRMVSGLCEASLFEEA 298

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D+   M  ++  PN+V+Y IL+ G  ++G +          +     P+   +  LI  
Sbjct: 299 MDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHA 358

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           YCK+   + A +L+  M++ G  P  L+
Sbjct: 359 YCKSRDYSYAYKLFKKMIKCGCQPGYLV 386



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 41/242 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A+ +  ++      P+++TY  ++ G     +L    ++   +      PN   F  
Sbjct: 295 FEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNS 354

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------------ 115
           LI A+CK      A  +F KM++ G +   + Y+  I     ++   S            
Sbjct: 355 LIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414

Query: 116 -----------------------------AFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                        AF +  EM      P+  +YS +I  LC   
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +E+A   F     N ++P V TY ILI  +CKAG   +A + +D ML  G  P+ +  +
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 534

Query: 207 TL 208
            L
Sbjct: 535 AL 536


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F ++  RGL P  +++NT+I G C    LDE  +L + +   ++ P+  
Sbjct: 235 KEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVF 294

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI   CKEGR+D A  +F +M ++G + N +T++ LIDG ++S+ M SA + Y +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V Y+ L++GLCK G + +A           + PD +TY  LI GYCK G  
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             AM++   M   G++ D +  + L
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTAL 439



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A KL  ++   G++PD ITY T+I GYC    L+ A+++ + +    +  +
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ FT LI  FC++GR+ DA     +M+E G K +  TY+ +IDGY K  N+K  F + +
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N   P +++Y++L++GLCK+G M+ A       L+  + PD +TY IL+ G+CK G
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552

Query: 182 RPTEAMQLYDSMLRNGIMPD-GLLLSTLADYN 212
           +  + ++L +     G++ D     S +++YN
Sbjct: 553 KAEDLLKLRNE---KGLIVDYAYYTSLVSEYN 581



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 116/202 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+A+  + Q+   G++PD++ YNT++ G C +  +++A +L +++  V +KP+ IT+T
Sbjct: 343 RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CKEG ++ A  +   M E+G   + V ++ LI G+ +   ++ A     EM E 
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+  +Y+++IDG CK+G ++           N   P V+TY +L+ G CK G+   A
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNA 522

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L ++ML  G+ PD +  + L
Sbjct: 523 NMLLEAMLNLGVTPDDITYNIL 544



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +LD   +L   + +  + PD+ TY+ +I G C   RLD A QLF+++    L+PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITFT LID   +  RMD A   + +ML  G K ++V Y+ L++G  K  ++  A  + +
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+ ++Y+ LIDG CK G +E A+       +  ++ D V +  LI G+C+ G
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A +    M+  G+ PD    + + D
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVID 476



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 108/199 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A +LF ++  RGL P+ IT+  +I G     R+D A+  + ++  + +KP+
Sbjct: 303 LCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPD 362

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  L++  CK G ++ A  +  +M   G K + +TY+ LIDGY K  +++SA ++ +
Sbjct: 363 LVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  +  + V+++ LI G C+ G + +A       ++  + PD  TY ++I GYCK G
Sbjct: 423 GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  NG  P
Sbjct: 483 NVKMGFKLLKEMQINGHKP 501



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 101/197 (51%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ + G  P +  YN +I  +C    + +A  +F ++    L+P +++F  LI+  C
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   +D+   +   M E     +V TYS LI G  K   +  A  +++EM +  + PN +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LIDG  +   M+ A+  +H  L   + PD+V Y  L+ G CK G   +A +L D M
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 194 LRNGIMPDGLLLSTLAD 210
              G+ PD +  +TL D
Sbjct: 390 KMVGMKPDKITYTTLID 406



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)

Query: 2   LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+     D+A  +F  + D  G       ++ ++  Y     + +A+Q      C +L  
Sbjct: 127 LVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQ------CFRLVR 180

Query: 61  NSITFTI-------LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           NS  F I       L+D              +S++LE G    V  Y+ LI+ + K  ++
Sbjct: 181 NS-NFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSI 239

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           + A  ++ E+ +  + P  VS++ LI+GLCK   ++E         +N + PDV TY++L
Sbjct: 240 RDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVL 299

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           I G CK GR   A QL+D M + G+ P+G+  + L D   +S
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRS 341


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             KE  L  A KL  ++  R ++PD ITYN +I G+C  NRLDEA Q+F+ +      PN
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI+ FCK  R++D   +F +M ++G   N VTY+ +I G+F++ +  SA  V++
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  N +  +I++YSIL+ GLC  G ++ AL  F     + +  ++  Y  +I G CKAG
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L+ S+    I PD +  +T+
Sbjct: 518 KVGEAWDLFCSL---SIKPDVVTYNTM 541



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL L  ++    ++ +++ +NTII   C    ++ AV LF ++    ++PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C  GR  DA+ + S MLEK    NVVT++ LID +FK   +  A  ++E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +I P+ ++Y++LI+G C    ++EA   F   +    LP++ TY  LI G+CK  
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  + ++L+  M + G++ + +  +T+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTI 439



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H++ A+ LF ++  +G+ P+++TYN++I   C+  R  +A +L   +   ++ PN
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LIDAF KEG++ +A  +  +M+++    + +TY+ LI+G+     +  A  +++
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  PNI +Y+ LI+G CK   +E+ +  F       L+ + VTY  +I+G+ +AG
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  ++  M+ N +  D +  S L
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSIL 474



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 9/215 (4%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD  T+ T+I G    N+  EAV L +++     +P+ 
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +++  CK G +D A  + +KM     KANVV ++ +ID   K ++++ A D++ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+Y+ LI+ LC  G   +A       L+  + P+VVT+  LI  + K G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             EA +L++ M++  I PD +       YNL  +G
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTI------TYNLLING 372



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 32/236 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +  +   P+I TYNT+I G+C   R+++ V+LF +++   L  N++T+T
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG---------------YFKSQ 111
            +I  F + G  D A M+F +M+      +++TYS L+ G               Y +  
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497

Query: 112 NMKSAFDVYEEM-----------------CENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            M+    +Y  M                 C  +I P++V+Y+ +I GLC + L++EA   
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           F    ++  LP+  TY  LIR   +      + +L   M  +G + D   +S + +
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 104/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LFG +      P I+ +N ++     +N+ +  + L E++  + +  +  T++I
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I+ FC+  ++  A  + +KM++ G + ++VT S L++GY  S+ +  A  + ++M E  
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +++ LI GL       EA+      +     PD+VTY  ++ G CK G    A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M    I  + ++ +T+ D
Sbjct: 244 NLLNKMEAARIKANVVIFNTIID 266



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +  + L  Q+   G+  D+ TY+  I  +C  ++L  A+ +  K+  +  +P+ +T + 
Sbjct: 99  FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ +C   R+ DA  +  +M+E G K +  T++ LI G F       A  + ++M +  
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y  +++GLCKRG ++ AL   +      +  +VV +  +I   CK      A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278

Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
            L+  M   GI P+ +    L++ L +Y   S  S+
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 80/169 (47%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           ++D+AV LF  +   +  P+ + F  L+ A  K  + +    +  +M   G   ++ TYS
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
             I+ + +   +  A  V  +M +    P+IV+ S L++G C    + +A+      ++ 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              PD  T+  LI G     + +EA+ L D M++ G  PD +   T+ +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 113/201 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++   +   G+E D+ TYNT+ CG    NR+DEA  L   +    ++PN +++T 
Sbjct: 258 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 317

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C EG M +A  +F +M   G + ++VTY+ ++DGY K  +++ A     EM +  
Sbjct: 318 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKG 377

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I SY+ L+ G C  G ++ AL  F         P++V Y  LI G  K GR  EA 
Sbjct: 378 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 437

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           QLYD+ML +G+ PD  L S L
Sbjct: 438 QLYDNMLGDGLTPDDALYSAL 458



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 35/223 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  + L  D+  Y+++I  YC    +  A ++F++     ++PN  T+  LI+ FC
Sbjct: 159 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 218

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY-------------------------- 107
           K G+M+ A M+ + M  +G   N + ++ +IDGY                          
Sbjct: 219 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 278

Query: 108 ---------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
                     ++  M  A ++   M E  + PN VSY+ LI   C  G M EA   F   
Sbjct: 279 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 338

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             N   P +VTY +++ GY K G   EA +  + M + G++PD
Sbjct: 339 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPD 381



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 5/207 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIIT---YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           HLD A  L  Q       PD +T    + ++ GYC   R+  A QL +++    +K N++
Sbjct: 46  HLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 103

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  L+DA+ +E   D    M   M  +G +  V TY+ L+DG   ++++     V+EEM
Sbjct: 104 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 163

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N+S ++  YS +I+  C+ G +  A   F   + N + P+  TY  LI G+CK G+ 
Sbjct: 164 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 223

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L   M   G+  + ++ +T+ D
Sbjct: 224 EAAEMLVTDMQVRGVGINQIVFNTMID 250



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 103/205 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E   D   ++   + + G+EP + TY  ++ G  +   + +   +FE++    L  +  
Sbjct: 114 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 173

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ +I+A+C+ G +  A+ +F + +  G + N  TY  LI+G+ K   M++A  +  +M
Sbjct: 174 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 233

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N + ++ +IDG C++ ++++AL          +  DV TY  L  G  +A R 
Sbjct: 234 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 293

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L   M+  G+ P+ +  +TL
Sbjct: 294 DEAKNLLRIMIEKGVRPNHVSYTTL 318



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 71/132 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++   G EP ++TYN ++ GY     + EA +   ++    L P+  ++  L+ 
Sbjct: 331 ARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVH 390

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++D A  +F +M ++G K N+V Y+ LI G  K    + AF +Y+ M  + ++P
Sbjct: 391 GHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTP 450

Query: 131 NIVSYSILIDGL 142
           +   YS L+  L
Sbjct: 451 DDALYSALVGSL 462



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK+  +  A +   ++  +GL PDI +Y  ++ G+C   ++D A++LFE++     KPN 
Sbjct: 358 IKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNL 417

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF--KSQNMK 114
           + +T LI    KEGR ++A  ++  ML  G   +   YS L+      K QN+K
Sbjct: 418 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVK 471


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 118/202 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A   F ++  RG+ P++ITY+T+I G+C   +L  A  L  ++    + PN
Sbjct: 215 LCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPN 274

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILIDA CKEG++ +A  + ++M  KG  A+VVTY+ ++DG  KSQN+  A  ++ 
Sbjct: 275 VYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFM 334

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I PN  +Y+ LIDGLCK G ++ A   F   L      DV TY ++I G CK G
Sbjct: 335 KMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEG 394

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              +A+ +   M  NG +P+ +
Sbjct: 395 MFDKALAMKSKMEDNGCIPNAV 416



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL   + DR   PD++ Y+TII G C    +++A   F ++    + PN IT++ LI 
Sbjct: 189 AVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIW 248

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  G++  A  + ++M+ K    NV TY+ LID   K   +K A  +  EM       
Sbjct: 249 GFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPA 308

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ ++DGLCK   +++A   F       + P+  TY  LI G CK GR   A +L+
Sbjct: 309 DVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLF 368

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
             +L  G   D      +  YN+  SG
Sbjct: 369 QHLLVKGCCID------VRTYNVMISG 389



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  + G++   G +PD IT NT++ G C    +  ++   +K+     + N 
Sbjct: 111 CHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQ 170

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  L++  CK G    A  +   + ++  + +VV YS +IDG  K + +  A+D + E
Sbjct: 171 VSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSE 230

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+++YS LI G C  G +  A    +  +  ++ P+V TY ILI   CK G+
Sbjct: 231 MNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGK 290

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +L   M   G   D +  +++ D
Sbjct: 291 VKEAKKLLAEMHHKGQPADVVTYNSVLD 318



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A+ L  Q+  +G+EP+++T N +I  +C L ++  +  +  K+  +  +P+
Sbjct: 75  LVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPD 134

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   L+   C +G +  +     K++ +G + N V+Y  L++G  K    + A  +  
Sbjct: 135 TITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLR 194

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + + +  P++V YS +IDGLCK  ++ +A   F       + P+V+TY+ LI G+C AG
Sbjct: 195 MIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAG 254

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A  L + M+   I P+    + L D
Sbjct: 255 QLMGAFSLLNEMILKNINPNVYTYNILID 283



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 86/163 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A KL  ++  +G   D++TYN+++ G C    LD+A  LF K+    ++PN
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID  CK GR+ +A  +F  +L KG   +V TY+ +I G  K      A  +  
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKS 404

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           +M +N   PN V++ I+I  L ++   ++A    H  +   LL
Sbjct: 405 KMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  +  F +L      P II +  I+     +     A+ L  ++    ++PN +T  I
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC  G+M  +  +  K+L+ G + + +T + L+ G      +K +   ++++    
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N VSY  L++GLCK G    A+       D    PDVV Y+ +I G CK     +A 
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             +  M   GI P+ +  STL
Sbjct: 226 DFFSEMNARGIFPNVITYSTL 246



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 60/136 (44%)

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           E  +DD    F+++L       ++ +  ++    K ++  +A  +  +M    I PN+V+
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            +ILI+  C  G M  +       L     PD +T   L++G C  G    ++  +D ++
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 195 RNGIMPDGLLLSTLAD 210
             G   + +   TL +
Sbjct: 163 AQGFQMNQVSYGTLLN 178


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 122/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA ++F +ML+KG   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A       +   L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G  P
Sbjct: 396 DVWTGSKLLKEMQRDGYKP 414



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++ G+     +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A  +++EM +  + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M+  G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 93/185 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+ G+ K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + E     +    + + PDV TY++LI G CK  +  +A  L+D ML  G++P+G+  
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYKPSVVT 418


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 118/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F ++ ++G+   ++TYN +I G C   +  EAV+L  K+  V L PN +T+ I
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC   +MD A  +F+++   G    +VTY+ LI GY K +N+  A D+ +EM E  
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P+ V+Y+ILID   +    E+A         + L+PDV TY++L+ G C  G   EA 
Sbjct: 399 IAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEAS 458

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+ S+    + P+ ++ +T+
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTM 479



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 113/191 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL  ++   GL P+I+TYN +I G+C + ++D AV+LF +L    L P  +T+  LI 
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIA 376

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K   +  A  +  +M E+    + VTY+ LID + +  + + A +++  M ++ + P
Sbjct: 377 GYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVP 436

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +YS+L+ GLC  G M+EA   F    + HL P+ V Y  +I GYCK G    A++L 
Sbjct: 437 DVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLL 496

Query: 191 DSMLRNGIMPD 201
           + M+++G++P+
Sbjct: 497 NEMVQSGMVPN 507



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 107/194 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+A++LF QL   GL P ++TYNT+I GY  +  L  A+ L +++    + P+ +T+TI
Sbjct: 349 MDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTI 408

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAF +    + A  M S M + G   +V TYS L+ G     NMK A  +++ + E +
Sbjct: 409 LIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH 468

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ +I G CK G    AL   +  + + ++P+V ++   I   C+  +  EA 
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAE 528

Query: 188 QLYDSMLRNGIMPD 201
            L   M+ +G+ P 
Sbjct: 529 LLLGQMINSGLKPS 542



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C    +     +L   L + GL P+++ Y T+I G C    +  A  LF K+  +
Sbjct: 163 IMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRL 222

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L PN  T+++L++ F K+G   +   M+  M   G   N   Y+CLI  Y     +  A
Sbjct: 223 GLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKA 282

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V+ EM E  I+  +++Y+ILI GLC+     EA+   H      L P++VTY ILI G
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +C   +   A++L++ +  +G+ P      TL  YN   +G
Sbjct: 343 FCDVRKMDSAVRLFNQLKSSGLSP------TLVTYNTLIAG 377



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 112/219 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  A  LF ++   GL P+  TY+ ++ G+       E  Q++E +    + PN+ 
Sbjct: 205 KDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI  +C +G +D A  +F++M EKG    V+TY+ LI G  + +    A  +  ++
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +SPNIV+Y+ILI+G C    M+ A+  F+    + L P +VTY  LI GY K    
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             A+ L   M    I P  +  + L D   + + +++ C
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKAC 423



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 1/201 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI+  + D A  +F +L  + +  D  ++  +I G C      +  +L   L    L P
Sbjct: 133 LLIRSNYFDKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSP 191

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + +T LID  CK+G +  A  +F KM   G   N  TYS L++G+FK    +  F +Y
Sbjct: 192 NVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY 251

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M  + I PN  +Y+ LI   C  G++++A   F    +  +   V+TY ILI G C+ 
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  EA++L   + + G+ P+
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPN 332



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 3/174 (1%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           Y+T++  Y   +  D+A+     +      P S TF  L+    +    D A  +F+++ 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            K    +  ++  +I G  ++      F +   + E  +SPN+V Y+ LIDG CK G + 
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 150 EALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            A   F C ++   L+P+  TY++L+ G+ K G   E  Q+Y++M R+GI+P+ 
Sbjct: 211 LAKNLF-CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++    KLF ++  + + PD +TY ++I G C   ++ EA +LF ++    LKP+ +
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEV 428

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID +CK G M +A  + ++M+EKG   NVVTY+ L+DG  K   +  A ++  EM
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN+ +Y+ LI+GLCK G +E+A+            PD +TY  ++  YCK G  
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +A +L   ML  G+ P      T+  +N+  +G
Sbjct: 549 AKAHELLRIMLDKGLQP------TIVTFNVLMNG 576



 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 125/239 (52%), Gaps = 35/239 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ------------------ 48
            L   LKL  +L  +GL+P+  TYN+II   C   R+ EA Q                  
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 49  -----------------LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                            LF+++   ++ P+ +T+T +I   C+ G++ +A  +FS+ML K
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K + VTY+ LIDGY K+  MK AF ++ +M E  ++PN+V+Y+ L+DGLCK G ++ A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               H   +  L P+V TY  LI G CK G   +A++L + M   G  PD +  +T+ D
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE H      L  Q+  RG  PD+++Y+ I+ GYC + +L + ++L E+L    LKPN 
Sbjct: 268 VKEAH-----SLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQ 322

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  +I   CK GR+ +A  +   M  +    + V Y+ LI G+ KS N+   + +++E
Sbjct: 323 YTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDE 382

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P+ V+Y+ +I GLC+ G + EA   F   L   L PD VTY  LI GYCKAG 
Sbjct: 383 MKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L++ M+  G+ P+ +  + L D
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVD 470



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 111/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF ++  +GL+PD +TY  +I GYC    + EA  L  ++    L PN +T+T L+D
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G +D A  +  +M EKG + NV TY+ LI+G  K  N++ A  + EEM      P
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ ++D  CK G M +A       LD  L P +VT+ +L+ G+C +G   +  +L 
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  GIMP+    ++L
Sbjct: 591 KWMLDKGIMPNATTFNSL 608



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 110/191 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  +++++GL+P++ TYN +I G C +  +++AV+L E++      P++IT+T 
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA+CK G M  A  +   ML+KG +  +VT++ L++G+  S  ++    + + M +  
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN  +++ L+   C R  M   +  +       ++PD  TY ILI+G+CKA    EA 
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657

Query: 188 QLYDSMLRNGI 198
            L+  M+  G 
Sbjct: 658 FLHKEMVEKGF 668



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 104/198 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  L  Q+ ++GL P+++TY  ++ G C    +D A +L  +++   L+PN  
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  CK G ++ A  +  +M   G   + +TY+ ++D Y K   M  A ++   M
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P IV++++L++G C  G++E+        LD  ++P+  T+  L++ YC     
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 184 TEAMQLYDSMLRNGIMPD 201
              +++Y  M   G++PD
Sbjct: 619 RATIEIYKGMHAQGVVPD 636



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 115/222 (51%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +++ A+KL  ++   G  PD ITY TI+  YC +  + +A +L   +    L+P 
Sbjct: 507 LCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L++ FC  G ++D   +   ML+KG   N  T++ L+  Y    NM++  ++Y+
Sbjct: 567 IVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYK 626

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+  +Y+ILI G CK   M+EA +     ++        +Y  LI+G+ K  
Sbjct: 627 GMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRK 686

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  EA +L++ M  +G + +  +     D N +  G+ E+ +
Sbjct: 687 KFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYE-EGNWENTL 727



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-SLNRLDEAVQLFEKLTCVQLK 59
           +L++   L  A KLF +L + G+   + + N  +     S + +  A ++F + + V + 
Sbjct: 190 VLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVC 249

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            N++++ I++   C+ G++ +A  +  +M  +G   +VV+YS ++DGY + + +     +
Sbjct: 250 WNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKL 309

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EE+    + PN  +Y+ +I  LCK G + EA        +  + PD V Y  LI G+ K
Sbjct: 310 MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +G  +   +L+D M R  I+PD +  +++
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   + D+GL+P I+T+N ++ G+C    L++  +L + +    + PN+ TF  L+ 
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C    M     ++  M  +G   +  TY+ LI G+ K++NMK A+ +++EM E   S 
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              SY+ LI G  KR   EEA   F     +  + +   Y I +    + G     ++L 
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELC 730

Query: 191 DSML 194
           D  +
Sbjct: 731 DEAI 734



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 1/152 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDV 119
           + + F +      + G + +A  +F K+L  G   +V + +  +     S   +++AF V
Sbjct: 180 HPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRV 239

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + E  E  +  N VSY+I++  LC+ G ++EA            +PDVV+Y++++ GYC+
Sbjct: 240 FREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             +  + ++L + + R G+ P+    +++  +
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISF 331



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 58/120 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ A ++++  +  +G+ PD  TYN +I G+C    + EA  L +++        + ++ 
Sbjct: 617 NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F K  + ++A  +F +M   G  A    Y   +D  ++  N ++  ++ +E  E 
Sbjct: 677 SLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 117/210 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  AL LF  +  +G+ P+  TY+++I G C L    EA++LF  +   ++ P+
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  L+DA CKEG +  A  +   M++   K +VVTY+ L+DG+     M    +V++
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFD 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+++SY+ LI+G CK  +M++A+  F       L+PD VTY  LI G C  G
Sbjct: 324 TMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +    L DY
Sbjct: 384 RLRDAIALFHEMVVYGQIPDLVTYRILFDY 413



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 114/206 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+LF ++T  G +PD++TY T+I G C +     A++    +     +P  + 
Sbjct: 137 EGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVV 196

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ +ID+ CK+ ++ +A  +FS ML KG   N  TYS LI G     + K A  ++  M 
Sbjct: 197 YSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 256

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I P+ ++++ L+D LCK G++ +A Y     + + L PDVVTY  L+ G+C      
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + + ++D+M+R G +P  +  +TL +
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLIN 342



 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 108/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L+ Q+   G+  +  T N +I  +C LNRL  A  +   +  +  +P++ TFT
Sbjct: 69  HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFT 128

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F KM  +G + +V+TY  LI+G  K  N  +A      M + 
Sbjct: 129 TLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR 188

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  P +V YS +ID LCK   + EAL  F   L   + P+  TY+ LI G C  G   EA
Sbjct: 189 NCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEA 248

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L+ +M+   IMPD L  +TL D
Sbjct: 249 IRLFYAMIHRKIMPDQLTFNTLVD 272



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 122/219 (55%), Gaps = 4/219 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +++ +GL PD +TYNT+I G C + RL +A+ LF ++      P+ +T+ I
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L D  CK  R+ +A ++   +       ++  YS ++DG  ++  +++A D++ ++    
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+I+I+GLC++GL+ EA   F    +N   P+  TY ++ RG+ +      A+
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529

Query: 188 QLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
           QL+  ML  G   D     LL+  L+D  L  S  Q  C
Sbjct: 530 QLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILC 568



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL+    A  + G +   G +P   T+ T+I G C   ++ EA+QLF+K+T    +P+ 
Sbjct: 100 CHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDV 159

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LI+  CK G    A      M ++  +  VV YS +ID   K + +  A  ++ +
Sbjct: 160 LTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSD 219

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISPN  +YS LI GLC  G  +EA+  F+  +   ++PD +T+  L+   CK G 
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGM 279

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A  + D M+++ + PD +  ++L D
Sbjct: 280 VVKAHYVVDVMIQSDLKPDVVTYNSLMD 307



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +   + +F  +  +G  P +I+Y T+I GYC +  +D+A+ LFE+++   L P+++T+  
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F +M+  G   ++VTY  L D   K+  +  A  + + +   N
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I  YSI++DG+C+ G +E A   F       L PDV TY I+I G C+ G   EA 
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L+  M  NG  P+         YNL + G
Sbjct: 495 KLFGEMDENGCSPNA------CTYNLITRG 518



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 98/201 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++      P I+ ++ ++     +      + L++++    +  N+ T  I
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  +   +L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y  LI+GLCK G    A+         +  P VV Y+ +I   CK  + TEA+
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  ML  GI P+    S+L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSL 235



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 77/146 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ L   +    L+PDI  Y+ ++ G C    L+ A  LF KL+   L P+
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C++G + +A+ +F +M E G   N  TY+ +  G+ ++     A  +++
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQ 533

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L++ L   GL
Sbjct: 534 EMLSRGFSIDVSTTTLLVEMLSDDGL 559



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 84/172 (48%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           ++N +D+A+ LF ++  ++  P+ + F+ L+ +  +         ++ +M   G   N  
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T + LI+ +     +  AF V  ++ +    P+  +++ LI GLC  G + EAL  F   
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 PDV+TY  LI G CK G  + A++   SM +    P  ++ ST+ D
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIID 202


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 122/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA ++F +ML+KG   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A       +   L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 102/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A  +++EM +  + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M+  G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 92/185 (49%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + E     +    + + PDV TY++LI G CK  +  +A  L+D ML  G++P+G+  
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 116/219 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  L   + +R   P   TYNT+I G C    +D A  L ++       P+
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++IL D  CK GR+D+A  +  +M  KG   N+VTY+ LIDG  K+   + A+++ E
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  +   P++V+Y+I++DGLCK G +++AL      L     P V+TY  L+ G C+ G
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  EA  ++  M+      D L   +L +   +SS ++E
Sbjct: 486 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKE 524



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A ++  ++ DRG+ PD +T+N+I+ G C   + + A  L   +     +P+
Sbjct: 271 LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 330

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   CK+  +D A  +  + +  G   +VVTYS L DG  K   +  AF++ +
Sbjct: 331 CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 390

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +PN+V+Y+ LIDGLCK    E+A       + +  +PDVVTY I++ G CK G
Sbjct: 391 EMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEG 450

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A+++ + ML+ G  P  +  + L
Sbjct: 451 RLDKALKMVEGMLKRGCTPSVITYTAL 477



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 67/274 (24%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L  +++ +G  P+++TYNT+I G C  ++ ++A +L E L      P+
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI++D  CKEGR+D A  M   ML++G   +V+TY+ L++G  ++  +  A  +++
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495

Query: 122 EMCENNIS--------------------------------PNIVSYSILIDGLCKRGLME 149
           EM   + +                                P I  Y+ L+DG CK G ++
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD 555

Query: 150 EALYAF------------------------HCALDNHL-----------LPDVVTYAILI 174
           E    F                        H  +D              +PDVV+Y I+I
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G  KA +P EA Q+ D M++ GI PD +  +TL
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 117/217 (53%), Gaps = 4/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  AL++F  +      PD I YN II G+C  N  D A++  +++   ++ P+  
Sbjct: 207 KTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVF 262

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILID  CK  + D A+ M  +M+++G   + VT++ ++DG  K+   + A  +   M
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E N  P+  +Y+ LI GLCK+  ++ A       + +  +PDVVTY+IL  G CK GR 
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA +L   M   G  P+ +  +TL D   ++S +++
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEK 419



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 105/192 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++D A  L  +    G  PD++TY+ +  G C   R+DEA +L ++++     PN
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK  + + A  +   ++  G   +VVTY+ ++DG  K   +  A  + E
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +   +P++++Y+ L++GLC+ G ++EA + F   +      D + Y  L+ GYCK+ 
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 520

Query: 182 RPTEAMQLYDSM 193
           R  EA ++ D +
Sbjct: 521 RTKEAQKVVDGI 532



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 4/195 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++ D G  PD  TY+ +I   C +N++D+A  + +K      KP    +TIL  AFC
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFC 206

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+ DA  +F  +    P  + + Y+ +I G+ +  +   A +  +EM E  ++P++ 
Sbjct: 207 KTGRLKDALEIFRNI----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVF 262

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ILIDGLCK    ++A    H  +D  + PD VT+  ++ G CKAG+   A  L   M
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322

Query: 194 LRNGIMPDGLLLSTL 208
                 P     +TL
Sbjct: 323 AERNCRPSCCTYNTL 337



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 32/239 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------ 55
           L KE  LD ALK+   +  RG  P +ITY  ++ G C   R+DEA  +F+++        
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 505

Query: 56  --------------------------VQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
                                     ++  P    +  L+D +CKEGR+D+   +F  M 
Sbjct: 506 ALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA 565

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +G   N+ TY+ ++DG  K   +  AF   E M      P++VSY+I+IDGL K    +
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 625

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EA       +   + PD VTY  L+  +CK  R  +A+ +  +M++ G+ PD +  +TL
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A      +   G  PD+++YN II G    ++  EA Q+ +++    + P+
Sbjct: 583 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+  FCKE R DDA  +   M++ G   + VTY+ LI G  ++  +  A+++  
Sbjct: 643 AVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 702

Query: 122 EMCENN-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM  N  +     +Y+ +ID LCK G +++AL        + +  + VTY I I   CK 
Sbjct: 703 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 762

Query: 181 GRPTEAMQLYDSM 193
           GR  EA  L   M
Sbjct: 763 GRLDEASSLLSEM 775



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  AL L   +T  G+E + +TYN  I   C   RLDEA  L  ++  ++   +
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---D 780

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +++T +I   CK  ++D A+ +  +M+  KG      T++ LID + K++ +  A  + 
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +   SP++++Y+++I  LCK   +++A   F       ++   V+Y +LI G C  
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           GR  EA+Q+ + M  +    D L    +A ++
Sbjct: 901 GRGKEALQVLEEMASSDCEIDDLKWEDVAPHS 932



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 4/200 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+  F    DRG +    T N  +         D    +FE++      P+S T+ ++I 
Sbjct: 109 AIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIK 168

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C+  ++D A  M  K   +G K  V  Y+ L   + K+  +K A +++     N  SP
Sbjct: 169 SLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF----RNIPSP 224

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ +I G C++   + AL       +  + PDV TY ILI G CKA +  +A ++ 
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEML 284

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+  G+ PD +  +++ D
Sbjct: 285 HEMVDRGVTPDTVTFNSIMD 304


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA ++F +ML+KG   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A       +   L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLNVGLKPE 380



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG   + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L+  L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 102/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A  +++EM +  + PN V+++ LIDG
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M+  G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 94/185 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A  L+D ML  G++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 113/201 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++   +   G+E D+ TYNT+ CG    NR+DEA  L   +    ++PN +++T 
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 393

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C EG M +A  +F +M   G + ++VTY+ ++DGY K  +++ A     EM +  
Sbjct: 394 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKG 453

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I SY+ L+ G C  G ++ AL  F         P++V Y  LI G  K GR  EA 
Sbjct: 454 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           QLYD+ML +G+ PD  L S L
Sbjct: 514 QLYDNMLGDGLTPDDALYSAL 534



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 35/223 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  + L  D+  Y+++I  YC    +  A ++F++     ++PN  T+  LI+ FC
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY-------------------------- 107
           K G+M+ A M+ + M  +G   N + ++ +IDGY                          
Sbjct: 295 KIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVY 354

Query: 108 ---------FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
                     ++  M  A ++   M E  + PN VSY+ LI   C  G M EA   F   
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             N   P +VTY +++ GY K G   EA +  + M + G++PD
Sbjct: 415 AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPD 457



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 5/207 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIIT---YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           HLD A  L  Q       PD +T    + ++ GYC   R+  A QL +++    +K N++
Sbjct: 122 HLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  L+DA+ +E   D    M   M  +G +  V TY+ L+DG   ++++     V+EEM
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N+S ++  YS +I+  C+ G +  A   F   + N + P+  TY  LI G+CK G+ 
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 299

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L   M   G+  + ++ +T+ D
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMID 326



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 71/132 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++   G EP ++TYN ++ GY     + EA +   ++    L P+  ++  L+ 
Sbjct: 407 ARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVH 466

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++D A  +F +M ++G K N+V Y+ LI G  K    + AF +Y+ M  + ++P
Sbjct: 467 GHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTP 526

Query: 131 NIVSYSILIDGL 142
           +   YS L+  L
Sbjct: 527 DDALYSALVGSL 538



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 103/205 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E   D   ++   + + G+EP + TY  ++ G  +   + +   +FE++    L  +  
Sbjct: 190 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ +I+A+C+ G +  A+ +F + +  G + N  TY  LI+G+ K   M++A  +  +M
Sbjct: 250 FYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDM 309

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N + ++ +IDG C++ ++++AL          +  DV TY  L  G  +A R 
Sbjct: 310 QVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L   M+  G+ P+ +  +TL
Sbjct: 370 DEAKNLLRIMIEKGVRPNHVSYTTL 394



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK+  +  A +   ++  +GL PDI +Y  ++ G+C   ++D A++LFE++     KPN 
Sbjct: 434 IKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNL 493

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF--KSQNMK 114
           + +T LI    KEGR ++A  ++  ML  G   +   YS L+      K QN+K
Sbjct: 494 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNVK 547


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITYN++I G+C  +RLD A  +F  +      P+
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TFT LID +C   R+DD   +  +M  +G  AN VTY+ LI G+    ++ +A D+ +
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           +M  + + P+IV+ + L+DGLC  G +++AL  F         LD     N + PDV+TY
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+PD ITY T + G C +     A+ L  K+  +  +KP
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID  CK+GR  D+  +F +M +KG   N+VTY+C+I G+  S    +A  + 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISPN+V+Y+ LI+   K G   EA   +   L   ++P+ +TY  +I G+CK 
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  PD    +TL D
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLID 401



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 114/197 (57%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ D+G+ P+I+TYN +I G+C   R   A +L +++   ++ PN +T+  LI+AF 
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           KEG+  +A  ++ +ML +G   N +TY+ +IDG+ K   + +A D++  M     SP++ 
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LIDG C    +++ +   H      L+ + VTY  LI G+C  G    A+ L   M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 194 LRNGIMPDGLLLSTLAD 210
           + +G+ PD +  +TL D
Sbjct: 455 ISSGVCPDIVTCNTLLD 471



 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 12/223 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++  RGL  + +TYNT+I G+C +  L+ A+ L +++    + P+ +T  
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V+TY+ LI G         
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           GYCKAGR  + ++L+  M R GI+ D ++  TL  Y  +  G+
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI-YGFRKVGN 629



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 87/151 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F  +      PN
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ +CK GR+DD   +F +M  +G  A+ + Y  LI G+ K  N+  A D+++
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ G   +  +E A+
Sbjct: 639 EMISSGVYPDTITIRNMLTGFWSKEELERAV 669



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 97/174 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD++TYN +ICG  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  + + Y  LI G
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
             K G +  AL  F   + + + PD +T   ++ G+        A+ + + + R
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 106/204 (51%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P +I +N ++     + R D  + L++K+   Q++ +  +FTI
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A D++ ++C   
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++++ L++GLC+ G + EA+      ++N L PD +TY   + G CK G    A+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I P+ ++ S + D
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIID 261



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G   +  L++A+ LF  +   +  P+ I F  L+ A  +  R D    ++ KM  K  + 
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        PDV+T+  L+ G C+ GR  EA+ L D M+ NG+ PD +   T  D
Sbjct: 175 H----QICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVD 225



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 69/122 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+NT+I GYC   R+D+ ++LF ++    +  +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I +  LI  F K G ++ A  +F +M+  G   + +T   ++ G++  + ++ A  + E
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 122 EM 123
           ++
Sbjct: 674 DL 675


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITYN++I G+C  +RLD A  +F  +      P+
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TFT LID +C   R+DD   +  +M  +G  AN VTY+ LI G+    ++ +A D+ +
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           +M  + + P+IV+ + L+DGLC  G +++AL  F         LD     N + PDV+TY
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+PD ITY T + G C +     A+ L  K+  +  +KP
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID  CK+GR  D+  +F +M +KG   N+VTY+C+I G+  S    +A  + 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISPN+V+Y+ LI+   K G   EA   +   L   ++P+ +TY  +I G+CK 
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  PD    +TL D
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLID 401



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 114/197 (57%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ D+G+ P+I+TYN +I G+C   R   A +L +++   ++ PN +T+  LI+AF 
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           KEG+  +A  ++ +ML +G   N +TY+ +IDG+ K   + +A D++  M     SP++ 
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LIDG C    +++ +   H      L+ + VTY  LI G+C  G    A+ L   M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 194 LRNGIMPDGLLLSTLAD 210
           + +G+ PD +  +TL D
Sbjct: 455 ISSGVCPDIVTCNTLLD 471



 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 12/223 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++  RGL  + +TYNT+I G+C +  L+ A+ L +++    + P+ +T  
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V+TY+ LI G         
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           GYCKAGR  + ++L+  M R GI+ D ++  TL  Y  +  G+
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI-YGFRKVGN 629



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 87/151 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F  +      PN
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ +CK GR+DD   +F +M  +G  A+ + Y  LI G+ K  N+  A D+++
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ G   +  +E A+
Sbjct: 639 EMISSGVYPDTITIRNMLTGFWSKEELERAV 669



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 96/172 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD++TYN +ICG  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  + + Y  LI G
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
             K G +  AL  F   + + + PD +T   ++ G+        A+ + + +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 106/204 (51%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P +I +N ++     + R D  + L++K+   Q++ +  +FTI
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A D++ ++C   
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++++ L++GLC+ G + EA+      ++N L PD +TY   + G CK G    A+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I P+ ++ S + D
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIID 261



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G   +  L++A+ LF  +   +  P+ I F  L+ A  +  R D    ++ KM  K  + 
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        PDV+T+  L+ G C+ GR  EA+ L D M+ NG+ PD +   T  D
Sbjct: 175 H----QICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVD 225



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 69/122 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+NT+I GYC   R+D+ ++LF ++    +  +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I +  LI  F K G ++ A  +F +M+  G   + +T   ++ G++  + ++ A  + E
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 122 EM 123
           ++
Sbjct: 674 DL 675


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 123/207 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  AL LFG +T + ++PDI+TYN +I G+C    +++A +L+ ++   ++ PN I
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ IL++ +C  G + +A  ++ +M+ KG K  +VT + +I GY +S ++  A +   +M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ ++Y+ LI+G  K   M++A +  +      L PDVVTY +++ G+C+ GR 
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  +   M+  GI PD    +TL +
Sbjct: 622 QEAELILRKMIERGIDPDRSTYTTLIN 648



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 117/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL++  ++ ++G   D++ YNTI+ G C    L +A  LF+++    + P+  TFT 
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CKEG M  A  +F  M +K  K ++VTY+ LIDG+ K+  M+ A +++ EM    
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN +SY+IL++G C  G + EA   +   +   + P +VT   +I+GYC++G  ++A 
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +    M+  G+ PD +  +TL +
Sbjct: 556 EFLGKMISEGVGPDSITYNTLIN 578



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 125/214 (58%), Gaps = 5/214 (2%)

Query: 1   MLIKECHLDAALK---LFGQLTDRGLEPDIITYNTIICGYCSLN-RLDEAVQLFEKLTCV 56
           +L++ C  +  L+   +F  +  RG+ PD+I+++++I G  S N  LD+A+  F  +   
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI-GVSSRNGHLDQALMYFRDMKTS 354

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L P+++ +TILI+ +C+ G M +A  +  KMLE+G   +VV Y+ +++G  K + +  A
Sbjct: 355 GLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADA 414

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +++EM E  + P+  +++ LI G CK G M +AL  F      ++ PD+VTY ILI G
Sbjct: 415 NALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDG 474

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +CK     +A +L++ M+   I P+ +  + L +
Sbjct: 475 FCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D        +  +G+  DI+TYNT+I  YC    L EA ++   ++   LKP 
Sbjct: 195 LCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPT 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK+GR   A  +F++ML  G   +  TY+ L+    ++ N   A D++ 
Sbjct: 255 LFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFS 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +SP+++S+S LI    + G +++AL  F     + L+PD V Y ILI GYC+ G
Sbjct: 315 DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA+++ D ML  G   D +  +T+
Sbjct: 375 MMSEALEIRDKMLEQGCALDVVAYNTI 401



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 70/269 (26%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN-------------------- 41
           L K+     A  +F ++   GL PD  TYNT++   C  N                    
Sbjct: 265 LCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324

Query: 42  ---------------RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD------- 79
                           LD+A+  F  +    L P+++ +TILI+ +C+ G M        
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRD 384

Query: 80  ----------------------------DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ 111
                                       DA  +F +M+E+G   +  T++ LI G+ K  
Sbjct: 385 KMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEG 444

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           NM  A  ++  M + NI P+IV+Y+ILIDG CK   ME+A   ++  +   + P+ ++YA
Sbjct: 445 NMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           IL+ GYC  G  +EA +L+D M+R GI P
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIRKGIKP 533



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A ++   ++ +GL+P + TYN +I G C   R   A  +F ++  + L P++ 
Sbjct: 232 REGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C+     +A  +FS ML +G   +++++S LI    ++ ++  A   + +M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+ V Y+ILI+G C+ G+M EAL      L+     DVV Y  ++ G CK    
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L+D M+  G++PD    +TL
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTL 436



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   L+     F  L  +G    I   N+++ G   +  +D A +++ ++    ++ N 
Sbjct: 126 VQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNV 185

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+++A CK+ ++DD       M +KG  A++VTY+ LI+ Y +   +  AF+V   
Sbjct: 186 YTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P + +Y+ +I+GLCK+G    A   F+  L   L PD  TY  L+   C+   
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA  ++  ML  G+ PD +  S+L
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSL 331



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++ F +LI ++ +  ++++ T  F  +  KG   ++   + L+ G  K   +  A++VY
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E+  + I  N+ + +I+++ LCK   +++            +  D+VTY  LI  YC+ 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G   EA ++ +SM   G+ P      TL  YN   +G
Sbjct: 234 GLLGEAFEVMNSMSGKGLKP------TLFTYNAVING 264



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 52/91 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K  ++D A  L  ++  +GL+PD++TYN I+ G+C   R+ EA  +  K+    + P+
Sbjct: 580 FVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPD 639

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T LI+ +  +  + +A     +ML++G
Sbjct: 640 RSTYTTLINGYVSQDNLKEAFRFHDEMLQRG 670


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P+ ITYN++I G+C  +RLD A  +F  +      P+
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TFT LID +C   R+DD   +  +M  +G  AN VTY+ LI G+    ++ +A D+ +
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTY 170
           +M  + + P+IV+ + L+DGLC  G +++AL  F         LD     N + PDV+TY
Sbjct: 455 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 119/204 (58%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   LF ++ ++G+ PD+ TYN++I G+CS  R  +A QL +++   ++ P+ +T+ 
Sbjct: 271 HSDAQ-NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+AF KEG+  +A  ++ +ML +G   N +TY+ +IDG+ K   + +A D++  M   
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SP++ +++ LIDG C    +++ +   H      L+ + VTY  LI G+C  G    A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M+ +G+ PD +  +TL D
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLD 473



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 12/223 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  ++L  ++  RGL  + +TYNT+I G+C +  L+ A+ L +++    + P+ +T  
Sbjct: 410 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 469

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V+TY+ LI G         
Sbjct: 470 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 529

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++YEEM    I P+ ++YS +IDGLCK+  ++EA   F         P+VVT+  LI 
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 589

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           GYCKAGR  + ++L+  M R GI+ D ++  TL  Y  +  G+
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI-YGFRKVGN 631



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P  ITY TI+ G C       A+ L  K+  V  + P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID+ CK+GR  DA  +F++M EKG   ++ TY+ +I G+  S     A  + 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  ISP++V+Y+ LI+   K G   EA   +   L   ++P+ +TY  +I G+CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  PD    +TL D
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLID 403



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 1/207 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL  F Q+ +    P+++T+ T++ G C   R+ EAV L +++    L+P  IT
Sbjct: 162 EDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  ++D  CK+G    A  +  KM E      NVV YS +ID   K      A +++ EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++ +Y+ +I G C  G   +A       L+  + PDVVTY  LI  + K G+ 
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +LYD ML  GI+P+ +  +++ D
Sbjct: 342 FEAAELYDEMLPRGIIPNTITYNSMID 368



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 87/151 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F  +      PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ +CK GR+DD   +F +M  +G  A+ + Y  LI G+ K  N+  A D+++
Sbjct: 581 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ G   +  +E A+
Sbjct: 641 EMISSGVYPDTITIRNMLTGFWSKEELERAV 671



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 91/156 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD++TYN +ICG  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  + + Y  LI G
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             K G +  AL  F   + + + PD +T   ++ G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P ++ +  ++     + R D  + L++K+   Q++ +  +F I
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G   +VVT++ L+ G      +  A D + +M E  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P  +TY  ++ G CK G    A+
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ S + D
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIID 263



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ + F  L+    +  R D    ++ KM  K  + 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  +     +  A   + ++ +  + P++V+++ L+ GLC    + EAL  F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H   +    P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P  +   T+ D
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 69/122 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+NT+I GYC   R+D+ ++LF ++    +  +
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I +  LI  F K G ++ A  +F +M+  G   + +T   ++ G++  + ++ A  + E
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675

Query: 122 EM 123
           ++
Sbjct: 676 DL 677


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++  H +  + L  ++   G+E DI + + +I  +C L+R+D  + +  K+  + L+P+
Sbjct: 72  IVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPS 131

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT L++  C EG+MD   M++  ML +G + NV TY+ +I+   KS     A    +
Sbjct: 132 IVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLK 191

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    PN+V+YS LIDG C RG M+EA   F   +     P+V TY  L+ GYCK  
Sbjct: 192 QMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIE 251

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA+QL D  LR G++PD +  +T+
Sbjct: 252 RIEEAVQLLDETLRKGLVPDIVTFTTI 278



 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 111/195 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  +F  +  +G  P++ TY +++ GYC + R++EAVQL ++     L P+ +TFT
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFT 276

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I   C+ GR   A  +F  +   G   N++TY  L+DG  K  N++ AF +++EM  +
Sbjct: 277 TIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V Y+ILID LCK G +++    F   +D  L P+V TY  L+   CK G   EA
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEA 396

Query: 187 MQLYDSMLRNGIMPD 201
            +L+  M  +G  PD
Sbjct: 397 HKLFRKMEEDGCTPD 411



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 3/208 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL   D  L +  ++   GLEP I+T+ T++ G C   ++D+ + L++ +    L+PN 
Sbjct: 108 CHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNV 167

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ ++I++  K G+ ++A     +M + G   NVV YS LIDGY     M  A  V++ 
Sbjct: 168 YTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDL 227

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     +PN+ +Y+ L++G CK   +EEA+      L   L+PD+VT+  +I G C+AGR
Sbjct: 228 MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGR 287

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P  A QL+  +  +G  P+ +    L D
Sbjct: 288 PLAAQQLFRYICAHGHTPNIMTYGVLLD 315



 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 119/208 (57%), Gaps = 4/208 (1%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +D  + L+  +  RGL+P++ TYN II       + +EA+   +++  V   PN + 
Sbjct: 145 EGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVN 204

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ LID +C  G+MD+A  +F  M+ KG   NV TY+ L++GY K + ++ A  + +E  
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL 264

Query: 125 ENNISPNIVSYSILIDGLCKRG--LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
              + P+IV+++ +I GLC+ G  L  + L+ + CA  +   P+++TY +L+ G CK G 
Sbjct: 265 RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH--TPNIMTYGVLLDGLCKHGN 322

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L+  M R+ + P+ ++ + L D
Sbjct: 323 LEEAFALFQEMQRSTVKPNLVIYTILID 350



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL    Q+   G  P+++ Y+T+I GYC   ++DEA  +F+ +      PN
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L++ +CK  R+++A  +  + L KG   ++VT++ +I G  ++    +A  ++ 
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +C +  +PNI++Y +L+DGLCK G +EEA   F     + + P++V Y ILI   CK G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +  +L+  ++  G+ P+
Sbjct: 357 KIKDGKELFSRLIDEGLKPN 376



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 108/205 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A++L  +   +GL PDI+T+ TII G C   R   A QLF  +      PN +T+ 
Sbjct: 252 RIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYG 311

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+D  CK G +++A  +F +M     K N+V Y+ LID   K   +K   +++  + + 
Sbjct: 312 VLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDE 371

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+ L+  LCK GL+ EA   F    ++   PD   Y ++I+G+ +   P+ A
Sbjct: 372 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMA 431

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADY 211
            QL + M+  G   D    + L D+
Sbjct: 432 RQLVEEMVNRGFSADAATRALLNDF 456



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A  LF ++    ++P+++ Y  +I   C   ++ +  +LF +L    LKPN
Sbjct: 317 LCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPN 376

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L+ A CKEG + +A  +F KM E G   +   Y+ +I G+ + ++   A  + E
Sbjct: 377 VYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVE 436

Query: 122 EMCENNISPNIVSYSILID 140
           EM     S +  + ++L D
Sbjct: 437 EMVNRGFSADAATRALLND 455



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 82/167 (49%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
           D+A+  F  +   +  P  + F+ L  +  + G  +    +  ++   G + ++ + S L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           I+ +     +     V  ++ +  + P+IV+++ L++GLC  G M++ +  +   L   L
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            P+V TY ++I    K+G+  EA+     M + G +P+ +  STL D
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLID 210


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 124/207 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + AA  +   +T+ G+EPD++TYN+++ GY     + EA +LF+ +     KP+  
Sbjct: 197 KEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVF 256

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ILI+ +CK  R+D+A  +F++M+ +G   N V+Y+ LI G  +   ++ A D+++ M
Sbjct: 257 SYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM 316

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N   PN+ +Y+IL+DG CK+G + +A   F      +L P++V Y IL+   CK+G  
Sbjct: 317 HTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNL 376

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A +L+  +   G+ P+  + +T+ +
Sbjct: 377 KDARELFSELFVIGLQPNVQIYTTIIN 403



 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 112/199 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +LF ++  +G  P+ ++YNT+I G C L RL EA  LF+ +      PN  
Sbjct: 267 KAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLY 326

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D FCK+G +  A  +F  M     K N+V Y+ L++   KS N+K A +++ E+
Sbjct: 327 TYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSEL 386

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+  Y+ +I+GLCK GL++EAL AF    D+   PD  +Y ++IRG+ +    
Sbjct: 387 FVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDE 446

Query: 184 TEAMQLYDSMLRNGIMPDG 202
           + A+ L   M   G + D 
Sbjct: 447 SRAVHLIGEMRDRGFITDA 465



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL +F  +  + + P I TY ++I G C+ +R  EA  L  ++T + + PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L+D FCKEG++  A  +   M E G + +VVTY+ L+ GY     +  A  +++
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ SYSILI+G CK   ++EA   F+  +     P+ V+Y  LI G C+ G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L+ +M  NG +P+    + L D
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLD 333



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  +G +PD+ +Y+ +I GYC   R+DEA QLF ++      PN++++  LI 
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ GR+ +A  +F  M   G   N+ TY+ L+DG+ K   +  AF ++  M    + P
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+IL++ +CK G +++A   F       L P+V  Y  +I G CK G   EA++ +
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            +M  +G  PD         YN+   G  +H
Sbjct: 419 RNMEDDGCPPDEF------SYNVIIRGFLQH 443



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D    +  +    GL+P I+T+ T+I G   + +  +AV+LF+ +     +P+  T+T
Sbjct: 25  RVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYT 84

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +F KM E G + NVVTYS LI    K + +  A D++  M   
Sbjct: 85  TIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAK 144

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +ISP I +Y+ LI GLC     +EA    +     +++P+VVT+ +L+  +CK G+   A
Sbjct: 145 DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAA 204

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             +  +M   G+ PD +  ++L
Sbjct: 205 EGVLKTMTEMGVEPDVVTYNSL 226



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF  +  RG +PD  TY TII G C +     A  LF+K+     + N +T++ LI 
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK  R+++A  +FS M  K     + TY+ LI G       K A  +  EM   NI P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 131 NIVSYSILIDGLCKRGLM-----------------------------------EEALYAF 155
           N+V++++L+D  CK G +                                    EA   F
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +     PDV +Y+ILI GYCKA R  EA QL++ M+  G  P+ +  +TL
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 94/189 (49%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL P+  T N +I  +C L R+D    +  K   + L+P  +TFT LI+   K G+   A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F  M+ +G + +  TY+ +I+G  K      A  ++++M E     N+V+YS LI  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK   + EAL  F       + P + TY  LI+G C   R  EA  L + M    IMP+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 202 GLLLSTLAD 210
            +  + L D
Sbjct: 185 VVTFNVLVD 193



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A  LF  +   G  P++ TY  ++ G+C    L +A +LF  +    LKPN + + 
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL++A CK G + DA  +FS++   G + NV  Y+ +I+G  K   +  A + +  M ++
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDD 424

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
              P+  SY+++I G  +      A++      D   + D  T A
Sbjct: 425 GCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 1/217 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A +L   + D G  P+++T+ T+I G+C    +D A  LF+ +    ++P+ I ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID + K G +     +FS+ L KG K +VV +S  ID Y KS ++ +A  VY+ M   
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISPN+V+Y+ILI GLC+ G + EA   +   L   + P +VTY+ LI G+CK G     
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             LY+ M++ G  PD ++   L D  L   G   H +
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVD-GLSKQGLMLHAM 481



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 35/252 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF------------- 50
           K   +D A  LF  +  RG+EPD+I Y+T+I GY     L    +LF             
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357

Query: 51  ----------------------EKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                                 +++ C  + PN +T+TILI   C++GR+ +A  M+ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L++G + ++VTYS LIDG+ K  N++S F +YE+M +    P++V Y +L+DGL K+GLM
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+      L   +  +VV +  LI G+C+  R  EA++++  M   GI PD    +T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 209 ADYNLQSSGSQE 220
              ++     +E
Sbjct: 538 MRVSIMEGRLEE 549



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 101/191 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++GQ+  RG+EP I+TY+++I G+C    L     L+E +  +   P+ + + +L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K+G M  A     KML +  + NVV ++ LIDG+ +      A  V+  M    I P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +++ ++      G +EEAL+ F       L PD + Y  LI  +CK  +PT  +QL+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 191 DSMLRNGIMPD 201
           D M RN I  D
Sbjct: 590 DLMQRNKISAD 600



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 108/208 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L  A  ++ ++  +G+ P+++TY  +I G C   R+ EA  ++ ++    ++P+ 
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ LID FCK G +     ++  M++ G   +VV Y  L+DG  K   M  A     +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   +I  N+V ++ LIDG C+    +EAL  F       + PDV T+  ++R     GR
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA+ L+  M + G+ PD L   TL D
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLID 574



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 109/198 (55%), Gaps = 4/198 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ++K+ GQ     +  +++ +N++I G+C LNR DEA+++F  +    +KP+  TFT ++ 
Sbjct: 484 SVKMLGQ----SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
               EGR+++A  +F +M + G + + + Y  LID + K         +++ M  N IS 
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I   +++I  L K   +E+A   F+  ++  + PD+VTY  +I GYC   R  EA +++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + +      P+ + L+ L
Sbjct: 660 ELLKVTPFGPNTVTLTIL 677



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 87/173 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             D ALK+F  +   G++PD+ T+ T++       RL+EA+ LF ++  + L+P+++ + 
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDAFCK  +      +F  M      A++   + +I   FK   ++ A   +  + E 
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            + P+IV+Y+ +I G C    ++EA   F         P+ VT  ILI   CK
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 2   LIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+ +CH ++ A K F  L +  +EPDI+TYNT+ICGYCSL RLDEA ++FE L      P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669

Query: 61  NSITFTILIDAFCK 74
           N++T TILI   CK
Sbjct: 670 NTVTLTILIHVLCK 683



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I E  L+ AL LF ++   GLEPD + Y T+I  +C   +    +QLF+ +   ++  + 
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADI 601

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
               ++I    K  R++DA+  F+ ++E   + ++VTY+ +I GY   + +  A  ++E 
Sbjct: 602 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661

Query: 123 MCENNISPNIVSYSILIDGLCK 144
           +      PN V+ +ILI  LCK
Sbjct: 662 LKVTPFGPNTVTLTILIHVLCK 683


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 3/203 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITF 65
           DA   +F ++ + G  PD+ +YN +I G C   +  EA++L   +T        PN +++
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +ID F KEG +D A  +F +M+ +G   +VVTY+ LIDG  K+Q M  A  + + M +
Sbjct: 204 NTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P+  +Y+I+I G C  G +EEA+        + L PDVVTY++LI+ YCK GR  E
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAE 323

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  ++DSM+R G  P+  +   L
Sbjct: 324 ARSVFDSMVRKGQKPNSTIYHIL 346



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 125/244 (51%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ +   + D+G+ PD  TYN +I GYCSL +L+EAV+L +K++   L+P+
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG--------------- 106
            +T+++LI  +CK GR  +A  +F  M+ KG K N   Y  L+ G               
Sbjct: 305 VVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 364

Query: 107 --------------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                               Y K   +  A   + EM +N + P++VSYS +I  LCK G
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG 424

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +E+A+Y F+  +   L P+++++  LI G C  G   +  +L   M+  GI PD + ++
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 484

Query: 207 TLAD 210
           T+ D
Sbjct: 485 TIMD 488



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 121/213 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A   F  +   G++PD+++YNT+I GYC + ++DE+++  +++  + L+P+
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPD 549

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T+  L++ + K GR++DA  ++ +M  K  K   +T + ++ G F++  + +A ++Y 
Sbjct: 550 SWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYM 609

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +      I +Y+ ++ GLC+   ++EAL  F          DV T++I+I    K G
Sbjct: 610 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVG 669

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           R  EA  L+ +M+  G +PD +  S +   +++
Sbjct: 670 RIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIE 702



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 4/194 (2%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           G     +T N +I G C  NR D+A+ + F ++  +   P+  ++  LI   C E +  +
Sbjct: 121 GWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 180

Query: 81  ATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           A  +   M   G      NVV+Y+ +IDG+FK   +  A+ ++ EM    + P++V+Y+ 
Sbjct: 181 ALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LIDGLCK   M++A+       D  ++PD  TY I+IRGYC  G+  EA++L   M  +G
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300

Query: 198 IMPDGLLLSTLADY 211
           + PD +  S L  Y
Sbjct: 301 LQPDVVTYSLLIQY 314



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 100/195 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+  F ++   GL PD+++Y+T+I   C   R+++AV  F ++    L PN I
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +FT LI   C  G       +  +M+ +G   + +  + ++D   K   +  A D ++ +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++VSY+ LIDG C  G M+E++      +   L PD  TY  L+ GY K GR 
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566

Query: 184 TEAMQLYDSMLRNGI 198
            +A+ LY  M R  +
Sbjct: 567 EDALALYREMFRKDV 581



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 98/180 (54%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            +N +IC Y     +D+A+  F ++    L+P+ ++++ +I   CK GR++DA   F++M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + +G   N+++++ LI G       K   ++  EM    I P+ +  + ++D LCK G +
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F   +   + PDVV+Y  LI GYC  G+  E+++  D M+  G+ PD    ++L
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 11  ALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   +T  G     P++++YNT+I G+     +D+A  LF ++    L P+ +T+  
Sbjct: 181 ALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK   MD A  +   M +KG   +  TY+ +I GY     ++ A  + ++M  + 
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS+LI   CK G   EA   F   +     P+   Y IL+ GY   G   +  
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 360

Query: 188 QLYDSMLRNGI 198
            L D M+R+GI
Sbjct: 361 DLLDLMIRDGI 371



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 102/197 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+   GL P+II++ ++I G CS+    +  +L  ++    + P
Sbjct: 419 ILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 478

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I    ++D  CKEGR+ +A   F  ++  G K +VV+Y+ LIDGY     M  +    
Sbjct: 479 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL 538

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    + P+  +Y+ L++G  K G +E+AL  +       +    +T  I++ G  +A
Sbjct: 539 DRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQA 598

Query: 181 GRPTEAMQLYDSMLRNG 197
           GR   A +LY  M+  G
Sbjct: 599 GRIVAARELYMKMVDRG 615



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 91/150 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   + AA +L+ ++ DRG +  I TYNT++ G C  + +DEA+++FE L   + + +
Sbjct: 595 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 654

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+I+I+A  K GR+D+A  +FS M+ +GP  +V+TYS +I  + +   ++ + +++ 
Sbjct: 655 VRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFL 714

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M +N  + +    +I++  L ++G +  A
Sbjct: 715 SMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 42/210 (20%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ++K   ++   GL PD  TYN+++ GY    R+++A+ L+ ++    +K  +IT  I
Sbjct: 531 MDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 590

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY--------------------------- 100
           ++    + GR+  A  ++ KM+++G +  + TY                           
Sbjct: 591 MLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 650

Query: 101 --------SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                   S +I+   K   +  A  ++  M      P++++YS++I    + GL+EE+ 
Sbjct: 651 FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESD 710

Query: 153 YAF------HCALDNHLLPDVVTYAILIRG 176
             F       CA D+H+L +++   +L +G
Sbjct: 711 NLFLSMEKNGCAADSHML-NIIVRRLLEKG 739



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 74/146 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++F  L  +  E D+ T++ +I     + R+DEA  LF  +      P+ IT+++
Sbjct: 636 VDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSL 695

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I +  +EG ++++  +F  M + G  A+    + ++    +  +++ A     ++ E N
Sbjct: 696 MIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKN 755

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALY 153
            S    + ++LI  + ++   +E  +
Sbjct: 756 FSLEASTAALLIPIVSEKKYQKEVKF 781



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 47/103 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D A  LF  +  RG  PD+ITY+ +I  +     L+E+  LF  +       +
Sbjct: 665 LLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAAD 724

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           S    I++    ++G +  A    +K+ EK       T + LI
Sbjct: 725 SHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 117/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A +L   +   G+ P++I+YNT+I G+C   R DEA QL + +  V LKP+
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I++  L+  +CK GR+D+A  +F +ML KG     VTYS ++ G F ++    A ++Y 
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++    +I +Y+I+++GLCK   ++EA   F       L P+++T+ I+I    K G
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +AM L+ S+  +G++P+
Sbjct: 739 RKKDAMDLFASIPSHGLVPN 758



 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +   + D+G++PD++TYNTII G C    +D A  + + +    +KP+
Sbjct: 244 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID  CK   +D A  +   M++K  K ++ TY+CLI GY  +   K      E
Sbjct: 304 VVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++V+YS+L+D LCK G   EA   F+C +   + P+V  Y IL+ GY   G
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +   L D M+ NGI P+  + + +
Sbjct: 424 AIADLTDLLDLMVANGISPNNYIFNIV 450



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +   + D+ ++PDI TYN +I GY S     E V+  E++    L P+
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+++L+D  CK G+  +A  +F  M+ KG K NV  Y  L+ GY     +    D+ +
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N ISPN   ++I++    K+ +++EA++ F     + L PDVVTY ILI   CK G
Sbjct: 434 LMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A+  ++ M+ +G+ P+ ++ ++L
Sbjct: 494 RVDDAVLKFNQMINDGVTPNSVVFNSL 520



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 110/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F +++  GL PD++TY  +I   C L R+D+AV  F ++    + PNS+
Sbjct: 456 KKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSV 515

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  L+   C   R + A  +F +M ++G + NVV ++ ++        +  A  + + M
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN++SY+ LI G C  G  +EA       +   L PD+++Y  L+RGYCK GR 
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  L+  MLR G+ P  +  ST+
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTI 660



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 118/212 (55%), Gaps = 4/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +   + D+G++ D++TY+TII G C    +D A  + + +    +KP+
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID  CK   +D A  +   M++KG K +VVTY+ +IDG  K+Q +  A  V +
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + ++ P+I +Y+ LI G    G  +E +          L PDVVTY++L+   CK G
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNG 388

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLA 209
           + TEA +++  M+R GI P+    G+LL   A
Sbjct: 389 KCTEARKIFYCMIRKGIKPNVTIYGILLHGYA 420



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 3/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           L  E  ++ AL+L   + + G     P+++TYNTII G C    +D A  + + +    +
Sbjct: 171 LCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 230

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K + +T++ +ID  CK   +D A  +   M++KG K +VVTY+ +IDG  K+Q +  A  
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V + M +  + P++V+Y+ +IDGLCK   ++ A       +D  + PD+ TY  LI GY 
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             G   E ++  + M   G+ PD +  S L DY
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 118/200 (59%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +L   +   GL+PD+I+Y+T++ GYC   R+D A  LF ++    + P ++T++ +
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +       R  +A  ++  M++ G + ++ TY+ +++G  K+  +  AF +++ +C  ++
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PNI++++I+ID L K G  ++A+  F     + L+P+VVTY I+++   + G   E   
Sbjct: 721 RPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDN 780

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+ +M ++G  PD ++L+ +
Sbjct: 781 LFLAMEKSGCTPDSVMLNAI 800



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + A +LF ++ D+G+ P+++ +NTI+C  C+  ++  A +L + +  V ++PN I++ 
Sbjct: 529 RWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYN 588

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C  GR D+A  +   M+  G K ++++Y  L+ GY K+  + +A+ ++ EM   
Sbjct: 589 TLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRK 648

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P  V+YS ++ GL       EA   +   + +    D+ TY I++ G CK     EA
Sbjct: 649 GVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEA 708

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++ S+    + P+ +  + + D
Sbjct: 709 FKIFQSLCSKDLRPNIITFTIMID 732



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 107/193 (55%), Gaps = 1/193 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK F Q+ + G+ P+ + +N+++ G C+++R ++A +LF ++    ++PN + F  +
Sbjct: 497 DAVLK-FNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI 555

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C EG++  A  +   M   G + NV++Y+ LI G+  +     A  + + M    +
Sbjct: 556 MCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGL 615

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+++SY  L+ G CK G ++ A   F   L   + P  VTY+ +++G     R +EA +
Sbjct: 616 KPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE 675

Query: 189 LYDSMLRNGIMPD 201
           LY +M+++G   D
Sbjct: 676 LYLNMIKSGQQWD 688



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 102/188 (54%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RGL+PD++TY+ ++   C   +  EA ++F  +    +KPN   + IL+  +   G + D
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
            T +   M+  G   N   ++ ++  Y K   +  A  ++  M ++ +SP++V+Y ILID
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK G +++A+  F+  +++ + P+ V +  L+ G C   R  +A +L+  M   G+ P
Sbjct: 488 ALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRP 547

Query: 201 DGLLLSTL 208
           + +  +T+
Sbjct: 548 NVVFFNTI 555



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +  +G++P++  Y  ++ GY +   + +   L + +    + PN+  F I++ 
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+  +D+A  +FS+M + G   +VVTY  LID   K   +  A   + +M  + ++P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V ++ L+ GLC     E+A   F    D  + P+VV +  ++   C  G+   A +L 
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572

Query: 191 DSMLRNGIMPDGLLLSTL 208
           DSM R G+ P+ +  +TL
Sbjct: 573 DSMERVGVRPNVISYNTL 590



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYN----TIICGYCSLNRLDEAVQLFEKLTCV---QLKP 60
           +D ALKLF +L        +  +N     +    CS +  + AV LF ++      +++P
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCS-STSELAVSLFNRMARACSNKVRP 88

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV- 119
           +  T++IL   FC+ GR++     F  +L+ G + N V  + L++G   ++ +  A D+ 
Sbjct: 89  DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL 148

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN---HLLPDVVTYAILIRG 176
              M E    PN+VS + L+ GLC    +EEAL   H   ++   +  P+VVTY  +I G
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            CKA     A  +   M+  G+  D +  ST+ D
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIID 242



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 91/183 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF ++  +G+ P  +TY+TI+ G     R  EA +L+  +     + +  
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+++  CK   +D+A  +F  +  K  + N++T++ +ID  FK    K A D++  +
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PN+V+Y I++  + + GL++E    F     +   PD V    +IR     G  
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810

Query: 184 TEA 186
             A
Sbjct: 811 MRA 813



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 61/132 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  L  + L P+IIT+  +I       R  +A+ LF  +    L PN +T+ I
Sbjct: 705 VDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCI 764

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +EG +D+   +F  M + G   + V  + +I        +  A     ++ E N
Sbjct: 765 MMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824

Query: 128 ISPNIVSYSILI 139
            S    + S+LI
Sbjct: 825 FSLEASTTSLLI 836


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 118/208 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E  +      F ++ + G  P +I+ N ++ G   LNR+D+  Q+++++  V + PNS
Sbjct: 190 VREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNS 249

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF IL   FC++G +D       +M E+G + ++VTY+ LI  Y +   +  AF +Y  
Sbjct: 250 YTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRI 309

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   N+ P++VSY+ L++GLCK G + EA   FH  +   L PD+V++  LI GYCK G+
Sbjct: 310 MYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGK 369

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             E+  L   M+ +GI PD +    L +
Sbjct: 370 MRESRSLLHEMIGSGICPDKVTCQVLIE 397



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 105/197 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D   +++ ++   G+ P+  T+N +   +C    +D+     E++     +P+
Sbjct: 224 LLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPD 283

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  +C++GR+DDA  ++  M  +    ++V+Y+ L++G  K   ++ A  ++ 
Sbjct: 284 IVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFH 343

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++P+IVS++ LI G CK G M E+    H  + + + PD VT  +LI GY K  
Sbjct: 344 RMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEA 403

Query: 182 RPTEAMQLYDSMLRNGI 198
           R   A+ L   + R G+
Sbjct: 404 RIVSALNLVVELERFGV 420



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 102/200 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A +LF ++  RGL PDI+++NT+ICGYC   ++ E+  L  ++    + P+
Sbjct: 329 LCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPD 388

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  +LI+ + KE R+  A  +  ++   G   +   Y  L+    +     +A  + +
Sbjct: 389 KVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQ 448

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + +    P +  Y+ LI+ LCK   + +AL         ++ P  +TY  LI   C+  
Sbjct: 449 RISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTS 508

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L + ML++G++PD
Sbjct: 509 RSMEAESLMEEMLQSGMLPD 528



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 55/254 (21%)

Query: 10  AALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-------------- 54
           +AL  F  +  D GL+P I  Y  ++          EA++   +L               
Sbjct: 107 SALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQ 166

Query: 55  -----CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
                C     + + F +L+ A+ +EG + +    F K++E G   +V++ +CL++G  K
Sbjct: 167 TLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLK 226

Query: 110 SQNMKSAFDVYEEMCENNISPN-----------------------------------IVS 134
              +   + VY+EM    I PN                                   IV+
Sbjct: 227 LNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVT 286

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ LI   C++G +++A Y +      ++LPD+V+Y  L+ G CK G+  EA QL+  M+
Sbjct: 287 YNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMI 346

Query: 195 RNGIMPDGLLLSTL 208
             G+ PD +  +TL
Sbjct: 347 HRGLNPDIVSFNTL 360



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 66/140 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++  R ++P  ITY  +IC  C  +R  EA  L E++    + P+      L+ 
Sbjct: 478 ALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMH 537

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CKE  +  A  +     ++    +  +Y+ L+  Y +  +     ++ + M +   +P
Sbjct: 538 VYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAP 597

Query: 131 NIVSYSILIDGLCKRGLMEE 150
           NI ++  +I GL K   +E+
Sbjct: 598 NIQTFRQMIHGLWKAMAVEK 617



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 35/192 (18%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA  L  +++ RG  P +  YN +I   C  + + +A+ +  ++    +KP++IT+  LI
Sbjct: 442 AAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALI 501

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C+  R  +A  +  +ML+ G   +      L+  Y K +++                
Sbjct: 502 CCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDI---------------- 545

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
                           G  E  L  F        + D  +Y  L++ YC+    T  M+L
Sbjct: 546 ----------------GKAETLLQTFAKEFQ---IFDSESYNTLVKTYCEDADATRLMEL 586

Query: 190 YDSMLRNGIMPD 201
            D ML+ G  P+
Sbjct: 587 QDRMLKVGFAPN 598


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++  +G  PD  TY+ +I   C   ++++A  LF+++  V + P+  T+TI
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A  +F +M   G    VVTY+ LI  Y K++ +  A D++  M +  
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL----------------YAFHCALDNHLLPDVVTYA 171
             PN V+Y  L+DGLCK G + +A                 + F C   + L P+VVTY 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +   A +L D+ML +G  P+ ++   L D
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 487



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 19/224 (8%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   ++ A  LF ++   G+ PD+ TY  +I  +C    +++A  LFE++  V   P  
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T LI A+ K  ++  A  +F +M++ G + N VTY  L+DG  K+ N+  AF+VY +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 123 M--------------CEN--NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           +              CE+   ++PN+V+Y  L+DGLCK   ++ A       L +   P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + Y  LI G+CKAG+   A +++  M + G +P     ++L D
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 107/189 (56%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+++TY  ++ G C  +++D A +L + +     +PN I +  LID FCK G++D A 
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F +M + G   +V TY+ LID  FK   +  A  V  +M +++ +PN+V+Y+ +IDGL
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C+ G  E+AL       +    P+VVTY  LI G  KAG+   ++ L+  M R G  P+ 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 203 LLLSTLADY 211
           +    L ++
Sbjct: 620 VTYRVLINH 628



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 102/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L   +   G EP+ I Y+ +I G+C   ++D A ++F ++T     P+
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID   K+GR+D A  + S+ML+     NVVTY+ +IDG  +    + A  +  
Sbjct: 514 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 573

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   SPN+V+Y+ LIDGL K G ++ +L  F         P+ VTY +LI   C AG
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 182 RPTEAMQLYDSM 193
              +A  L   M
Sbjct: 634 LLDKARLLLGEM 645



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 16/224 (7%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ----- 57
           +K   +  A  +F ++ D G  P+ +TY  ++ G C    + +A +++ KL         
Sbjct: 369 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 428

Query: 58  -----------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
                      L PN +T+  L+D  CK  ++D A  +   ML  G + N + Y  LIDG
Sbjct: 429 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           + K+  + SA +V+ +M +    P++ +Y+ LID + K G ++ A+      L +   P+
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           VVTY  +I G C+ G   +A++L   M   G  P+ +  + L D
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 33/224 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D+A ++F Q+T  G  P + TY ++I       RLD A+++  ++      PN +
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  C+ G  + A  + S M EKG   NVVTY+ LIDG  K+  +  + D++ +M
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNH------ 162
                SPN V+Y +LI+ LC  GL+++A               L  + CA+         
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA 670

Query: 163 ------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
                        +P    Y +LI  + KAGR   AM+L+  M+
Sbjct: 671 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + ALKL   + ++G  P+++TY  +I G     ++D ++ LF +++     PN +T+ +L
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G +D A ++  +M +      +  Y C I G+  S++  ++  + EEM     
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGT 683

Query: 129 SPNIVSYSILIDGLCKRGLMEEA--LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            P    Y +LID   K G +E A  L+     + + +  D   YA LI+  C A +  EA
Sbjct: 684 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEA 743

Query: 187 MQLYDSMLRNGIMPD 201
            +LY  M R G +P+
Sbjct: 744 FRLYSEMTRRGFVPE 758



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 97/187 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K++G++       + +         C + + D+A QL +++      P++ T++ 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A ++F +M   G   +V TY+ LID + K+  ++ A  ++EEM    
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP +V+Y+ LI    K   + +A   FH  +D    P+ VTY  L+ G CKAG  ++A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 188 QLYDSML 194
           ++Y  ++
Sbjct: 414 EVYAKLI 420



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 47/258 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICG------------------------- 36
           L++  + D A+    ++      P+++TY T++ G                         
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176

Query: 37  ----------YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR------MDD 80
                     YC+      A +L  ++T     P  + + I I + C + +      +D 
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 236

Query: 81  ATMMFSKMLEKG---PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           A  ++ +ML       K NV  ++  + G  K      AF + +EM      P+  +YS 
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +I  LC    +E+A   F       + PDV TY ILI  +CKAG   +A  L++ M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 198 IMPDGLLLSTLADYNLQS 215
             P  +  + L    L++
Sbjct: 354 CSPTVVTYTALIHAYLKA 371



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +    +I G    +  DEA+    ++ C    PN +T+  L+  F K+ ++     + 
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + M+ +G   N   ++ L+  Y   ++   A+ +   M      P  V Y+I I  +C +
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  L++ A   +   L  + + + V  A   R  C  G+  +A QL   M+R G +
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 200 PD 201
           PD
Sbjct: 286 PD 287



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 3/183 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L D G  P  +TYN ++    S  ++D   ++ ++++      +  T      A CKEGR
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
             DA  M  +   +  K + V  + +I G  ++     A      M  N+  PN+V+Y  
Sbjct: 91  WADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+ G  K+  +       +  +     P+   +  L+  YC       A +L + M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 198 IMP 200
             P
Sbjct: 208 CPP 210



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+ +T+  L+      G++D    +  +M E G   +  T  C      K      A D
Sbjct: 37  RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALD 96

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + E     +   + V  + +I GL +    +EA+   H    N  +P+VVTY  L+ G+ 
Sbjct: 97  MIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           K  +     ++ + M+  G  P+  L ++L
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSL 183



 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QLKPNSITFTI 67
           A+L +  ++   G  P    Y  +I  +    RL+ A++L +++  V   +K ++  +  
Sbjct: 670 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 729

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           LI A C   ++++A  ++S+M  +G    +  + CLI G  + +    A  +   +C 
Sbjct: 730 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICH 787


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A       +   L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLNVGLKPE 380



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG   + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L+  L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 102/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A  +++EM +  + PN V+++ LIDG
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M+  G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 94/185 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A  L+D ML  G++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 118/213 (55%), Gaps = 9/213 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            L+ F ++   G  P+++TYNT+I GYC L R DEA      +    L+PN ITF ++I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++GR+ + + +  +M  KG   + VTY+ L++GY K  N   A  ++ EM  N +SP
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI+ +CK G +  A+  F       L P+  TY  +I G+ + G   EA ++ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           + M R+G +P      ++  YN   +G   HC+
Sbjct: 182 NEMTRSGFIP------SIVTYNALING---HCV 205



 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 123/217 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A++ F Q+  RGL P+  TY TII G+     LDEA ++  ++T     P+ +
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  C  GRM++A  +   M+ KG   +VV+YS +I G+ ++Q +  AF +  EM
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P+ V+YS LI GLC++  + EA   F   L   L PD  TY  LI  YCK G  
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A+ L+D M++ G +PD +  + L +   + + S+E
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKE 351



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 3/206 (1%)

Query: 6   CHLDAALKLFGQLTD---RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C L    + FG L     +GLEP++IT+N II G C   RL E  ++  +++     P+ 
Sbjct: 29  CKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDE 88

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  L++ +CKEG    A ++ ++M+  G   NVVTY+ LI+   K+ N+  A + +++
Sbjct: 89  VTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQ 148

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN  +Y+ +I+G  ++GL++EA    +    +  +P +VTY  LI G+C  GR
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA+ L   M+  G++PD +  ST+
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTI 234



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L    ++  +++ +G  PD +TYNT++ GYC      +A+ L  ++    L PN
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI++ CK G ++ A   F +M  +G   N  TY+ +I+G+ +   +  A+ V  
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P+IV+Y+ LI+G C  G MEEA+      +   +LPDVV+Y+ +I G+ +  
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A Q+   M+   ++PD +  S+L
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSL 269



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   AL L  ++   GL P+++TY ++I   C    L+ A++ F+++    L PN  
Sbjct: 100 KEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNER 159

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I+ F ++G +D+A  + ++M   G   ++VTY+ LI+G+     M+ A  + ++M
Sbjct: 160 TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++VSYS +I G  +   ++ A       +   +LPD VTY+ LI+G C+  R 
Sbjct: 220 VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           TEA  ++  ML   + PD    +TL +
Sbjct: 280 TEACDMFQEMLTIKLPPDEFTYTTLIN 306



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 110/203 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A ++  ++T  G  P I+TYN +I G+C L R++EA+ L + +    + P+ ++++ 
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  F +   +D A  M  +M+ K    + VTYS LI G  + + +  A D+++EM    
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y+ LI+  CK G + +AL+     +    LPD VTY +LI G  K  R  EA 
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +  +  +P  +  +TL +
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIE 376



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 115/209 (55%), Gaps = 15/209 (7%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++  ++  + + PD +TY+++I G C   RL EA  +F+++  ++L P+  T+T
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+A+CKEG ++ A  +  +M++KG   + VTY+ LI+G  K    K A  +  ++  +
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYD 362

Query: 127 NISPNIVSYSILID---------------GLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           +  P+ V+Y+ LI+               G C +GLM+EA   F   ++ +  P+   Y 
Sbjct: 363 DSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYN 422

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           ++I G+C+ G   +A +LY  M+    +P
Sbjct: 423 VIIHGHCRIGNVLKAYKLYKEMVHVDFVP 451



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 15/212 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ AL L  ++  +G  PD +TYN +I G     R  EA +L  KL      P+++
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAV 369

Query: 64  TFTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           T+  LI+                FC +G MD+A  +F  M+ K  K N   Y+ +I G+ 
Sbjct: 370 TYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHC 429

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +  N+  A+ +Y+EM   +  P+ V+   L+  L   G+  E        L +  L D  
Sbjct: 430 RIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAE 489

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
              +L+    K G       L   M ++G++P
Sbjct: 490 LSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 61/124 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++F  + ++  +P+   YN II G+C +  + +A +L++++  V   P+++T   
Sbjct: 399 MDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A   EG   +   +   +L      +      L++   K  NM   F++  EM ++ 
Sbjct: 459 LVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDG 518

Query: 128 ISPN 131
           + P+
Sbjct: 519 LIPS 522


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++  +G  PD  TY+ +I   C   ++++A  LF+++  V + P+  T+TI
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A  +F +M   G    VVTY+ LI  Y K++ +  A D++  M +  
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL----------------YAFHCALDNHLLPDVVTYA 171
             PN V+Y  L+DGLCK G + +A                 + F C   + L P+VVTY 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +   A +L D+ML +G  P+ ++   L D
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 487



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 19/224 (8%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   ++ A  LF ++   G+ PD+ TY  +I  +C    +++A  LFE++  V   P  
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T LI A+ K  ++  A  +F +M++ G + N VTY  L+DG  K+ N+  AF+VY +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 123 M--------------CEN--NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           +              CE+   ++PN+V+Y  L+DGLCK   ++ A       L +   P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + Y  LI G+CKAG+   A +++  M + G +P     ++L D
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 107/189 (56%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+++TY  ++ G C  +++D A +L + +     +PN I +  LID FCK G++D A 
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F +M + G   +V TY+ LID  FK   +  A  V  +M +++ +PN+V+Y+ +IDGL
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C+ G  E+AL       +    P+VVTY  LI G  KAG+   ++ L+  M R G  P+ 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 203 LLLSTLADY 211
           +    L ++
Sbjct: 620 VTYRVLINH 628



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 102/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L   +   G EP+ I Y+ +I G+C   ++D A ++F ++T     P+
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID   K+GR+D A  + S+ML+     NVVTY+ +IDG  +    + A  +  
Sbjct: 514 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 573

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   SPN+V+Y+ LIDGL K G ++ +L  F         P+ VTY +LI   C AG
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 182 RPTEAMQLYDSM 193
              +A  L   M
Sbjct: 634 LLDKARLLLGEM 645



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 16/224 (7%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ----- 57
           +K   +  A  +F ++ D G  P+ +TY  ++ G C    + +A +++ KL         
Sbjct: 369 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 428

Query: 58  -----------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
                      L PN +T+  L+D  CK  ++D A  +   ML  G + N + Y  LIDG
Sbjct: 429 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           + K+  + SA +V+ +M +    P++ +Y+ LID + K G ++ A+      L +   P+
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           VVTY  +I G C+ G   +A++L   M   G  P+ +  + L D
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 33/224 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D+A ++F Q+T  G  P + TY ++I       RLD A+++  ++      PN +
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  C+ G  + A  + S M EKG   NVVTY+ LIDG  K+  +  + D++ +M
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNH------ 162
                SPN V+Y +LI+ LC  GL+++A               L  + CA+         
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA 670

Query: 163 ------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
                        +P    Y +LI  + KAGR   AM+L+  M+
Sbjct: 671 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + ALKL   + ++G  P+++TY  +I G     ++D ++ LF +++     PN +T+ +L
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G +D A ++  +M +      +  Y C I G+  S++  ++  + EEM     
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGT 683

Query: 129 SPNIVSYSILIDGLCKRGLMEEA--LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            P    Y +LID   K G +E A  L+     + + +  D   YA LI+  C A +  EA
Sbjct: 684 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEA 743

Query: 187 MQLYDSMLRNGIMPD 201
            +LY  M R G +P+
Sbjct: 744 FRLYSEMTRRGFVPE 758



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 97/187 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K++G++       + +         C + + D+A QL +++      P++ T++ 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A ++F +M   G   +V TY+ LID + K+  ++ A  ++EEM    
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP +V+Y+ LI    K   + +A   FH  +D    P+ VTY  L+ G CKAG  ++A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 188 QLYDSML 194
           ++Y  ++
Sbjct: 414 EVYAKLI 420



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 47/258 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICG------------------------- 36
           L++  + D A+    ++      P+++TY T++ G                         
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176

Query: 37  ----------YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR------MDD 80
                     YC+      A +L  ++T     P  + + I I + C + +      +D 
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 236

Query: 81  ATMMFSKMLEKG---PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           A  ++ +ML       K NV  ++  + G  K      AF + +EM      P+  +YS 
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +I  LC    +E+A   F       + PDV TY ILI  +CKAG   +A  L++ M   G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 198 IMPDGLLLSTLADYNLQS 215
             P  +  + L    L++
Sbjct: 354 CSPTVVTYTALIHAYLKA 371



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +    +I G    +  DEA+    ++ C    PN +T+  L+  F K+ ++     + 
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + M+ +G   N   ++ L+  Y   ++   A+ +   M      P  V Y+I I  +C +
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  L++ A   +   L  + + + V  A   R  C  G+  +A QL   M+R G +
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 200 PD 201
           PD
Sbjct: 286 PD 287



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 3/183 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L D G  P  +TYN ++    S  ++D   ++ ++++      +  T      A CKEGR
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
             DA  M  +   +  K + V  + +I G  ++     A      M  N+  PN+V+Y  
Sbjct: 91  WADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+ G  K+  +       +  +     P+   +  L+  YC       A +L + M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 198 IMP 200
             P
Sbjct: 208 CPP 210



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+ +T+  L+      G++D    +  +M E G   +  T  C      K      A D
Sbjct: 37  RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALD 96

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + E     +   + V  + +I GL +    +EA+   H    N  +P+VVTY  L+ G+ 
Sbjct: 97  MIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           K  +     ++ + M+  G  P+  L ++L
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSL 183



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QLKPNSITFTI 67
           A+L +  ++   G  P    Y  +I  +    RL+ A++L +++  V   +K ++  +  
Sbjct: 670 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 729

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C   ++++A  ++S+M  +G    +  + CLI G  + +    A  +   +C   
Sbjct: 730 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789

Query: 128 IS 129
           ++
Sbjct: 790 VN 791


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 120/235 (51%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK   ++ A +L  ++   G+ P++  YN++I   C   +L+EA  LF  +    L PN
Sbjct: 340 LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPN 399

Query: 62  SITFTILIDAF-----------------------------------CKEGRMDDATMMFS 86
            +T+TILID F                                   CK G+M  A ++F 
Sbjct: 400 DVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFK 459

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M++KG K  V TY+ LI GY K   +  AF +Y EM    I+PN V+++ LI GLC+  
Sbjct: 460 EMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQIN 519

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            M EA   F   ++  +LP+ VTY +LI G+C+ G  T A +L D M++ G+ PD
Sbjct: 520 KMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPD 574



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 108/188 (57%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ D+GL+P + TY ++I GYC    + +A +L+ ++T   + PN++TFT LI   C
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +  +M +A+ +F +M+E     N VTY+ LI+G+ +  N   AF++ +EM +  +SP+  
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y  LI GLC  G + EA    +     H   D + Y  L++G+CK GR  EA+     M
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636

Query: 194 LRNGIMPD 201
           +  G+  D
Sbjct: 637 VGRGLQMD 644



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 117/220 (53%), Gaps = 2/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E +   A +L  ++  +GL PD  TY  +I G CS  R+ EA +    L     + + +
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDEL 611

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L+  FCKEGR+ +A +   +M+ +G + ++V+Y+ LI G   +QN +  F++  EM
Sbjct: 612 CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGAL-NQNDRILFELLREM 670

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V Y+ILIDG  K G +++A   ++  +    +P+ VTY  L+ G  KAG  
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYV 730

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            EA  L+  ML    +P+ +      D+ L   G+ E+ +
Sbjct: 731 NEAKLLFKRMLVGEAIPNHITYGCFLDH-LTKEGNMENAL 769



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 108/197 (54%), Gaps = 1/197 (0%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
            +L  ++  +G++PD + Y  +I G+     L +A + +  +      PNS+T+T L++ 
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             K G +++A ++F +ML      N +TY C +D   K  NM++A  ++  M + + + N
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-N 782

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            V+Y+ILI G C+ G  +EA       +   ++PD +TY+  I  YCK G    AM +++
Sbjct: 783 TVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWE 842

Query: 192 SMLRNGIMPDGLLLSTL 208
            ML+ G+ PD ++ + L
Sbjct: 843 CMLQRGLKPDRVVFNFL 859



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 107/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +  +++  ++ + G  P     + +I G   +  ++ A +L  K+  + + PN   +  
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNS 370

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ CK G++++A ++FS M E+G   N VTY+ LIDG+ +   +  AF  + +M E  
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           IS  + SY+ +I+  CK G M+ A   F   +D  L P V TY  LI GYCK G   +A 
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +LY  M   GI P+ +  + L
Sbjct: 491 KLYHEMTGKGIAPNTVTFTAL 511



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 115/213 (53%), Gaps = 1/213 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A KL+ ++T +G+ P+ +T+  +ICG C +N++ EA +LF+++  +++ PN +
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEV 541

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI+  C+EG    A  +  +M++KG   +  TY  LI G   +  +  A +   ++
Sbjct: 542 TYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDL 601

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              +   + + Y+ L+ G CK G ++EAL A    +   L  D+V+YA+LI G       
Sbjct: 602 HHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDR 661

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
               +L   M   G+ PD ++ + L D  ++S 
Sbjct: 662 I-LFELLREMHGKGMQPDNVIYTILIDGFIKSG 693



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 98/190 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   LD A   F ++ + G+   + +YN++I   C   ++  A  LF+++    LKP   
Sbjct: 412 RRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVA 471

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI  +CK+G +  A  ++ +M  KG   N VT++ LI G  +   M  A  +++EM
Sbjct: 472 TYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM 531

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I PN V+Y++LI+G C+ G    A       +   L PD  TY  LI G C  GR 
Sbjct: 532 VELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRV 591

Query: 184 TEAMQLYDSM 193
           +EA +  + +
Sbjct: 592 SEAKEFINDL 601



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IK  +L  A + +  +   G  P+ +TY  ++ G      ++EA  LF+++   +  PN
Sbjct: 689 FIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPN 748

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+   +D   KEG M++A  + + ML+ G  AN VTY+ LI GY +    + A  + +
Sbjct: 749 HITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLD 807

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+ ++YS  I   CKRG ++ A+  + C L   L PD V +  LI   C  G
Sbjct: 808 VMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNG 867

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A+QL + M+  G+ P
Sbjct: 868 ELDRALQLRNDMMLRGLKP 886



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 95/191 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A ++  Q    G    I+TYN  I G C   R+ EAV++   L    LK + +T+  
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C+    +    M  +M+E G   +    S LI+G  K  +++ AF++  ++ +  
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+  Y+ +I+ LCK G +EEA   F    +  L P+ VTY ILI G+ +  +   A 
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420

Query: 188 QLYDSMLRNGI 198
             ++ M+  GI
Sbjct: 421 YYFNKMIECGI 431



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            L+LF  L + G++PD   Y  ++   C L   ++A ++  +        + +T+ + I+
Sbjct: 209 VLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFIN 268

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK  R+ +A  +   + EKG KA++VTY  L+ G  + Q  +   ++ +EM E    P
Sbjct: 269 GLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVP 328

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  + S LI+GL K G +E A    +      ++P++  Y  +I   CK G+  EA  L+
Sbjct: 329 SEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLF 388

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M   G+ P+ +  + L D
Sbjct: 389 SVMAERGLNPNDVTYTILID 408



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 95/193 (49%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D GL P++ T + ++     + +  + ++LF+ L    +KP+   +T+++   C+   
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            + A  + ++    G   ++VTY+  I+G  KS+ +  A +V   + E  +  ++V+Y  
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+ GLC+    E  +      ++   +P     + LI G  K G    A +L + + + G
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360

Query: 198 IMPDGLLLSTLAD 210
           ++P+  + +++ +
Sbjct: 361 VVPNLFVYNSMIN 373



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE +++ AL+L   +  +G   + +TYN +I GYC + +  EA +L + +  + + P+
Sbjct: 759 LTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPD 817

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++  I  +CK G +D A  M+  ML++G K + V ++ LI     +  +  A  +  
Sbjct: 818 CITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRN 877

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M    + P   +Y  L+  L +R  + + 
Sbjct: 878 DMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 83/181 (45%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           ++ +I  Y    R+ + V +   +    L P   T + L++A  +  +      +F  ++
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
             G K +   Y+ ++    + ++   A ++  +   N  S +IV+Y++ I+GLCK   + 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA+       +  L  D+VTY  L+ G C+       M++ D M+  G +P    +S L 
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 210 D 210
           +
Sbjct: 338 E 338



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 71/149 (47%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S  F +LI  + +  R+ D  ++ + M + G    V T S L++   + +  +   +++
Sbjct: 154 SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + +    + P+   Y++++  LC+     +A    + A  N     +VTY + I G CK+
Sbjct: 214 DTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKS 273

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            R  EA+++  S+   G+  D +   TL 
Sbjct: 274 KRVWEAVEVKRSLGEKGLKADLVTYCTLV 302


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 115/204 (56%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L  A +  G +   G +P++++YNTII GY S   ++ A ++ + +    ++P+S T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI   CKEGR+++A+ +F KM+E G   N VTY+ LIDGY    +++ AF   +EM 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++ +Y++L+  L   G M EA           ++PD +TY ILI GY + G   
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A  L++ ML  GI P  +  ++L
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSL 389



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  LF ++ + GL P+ +TYNT+I GYC+   L+ A    +++    + P+  
Sbjct: 255 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 314

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+ A   EGRM +A  M  +M +KG   + +TY+ LI+GY +  N K AFD++ EM
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P  V+Y+ LI  L +R  M+EA   F   LD  + PDV+ +  +I G+C  G  
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  L   M R  + PD +  +TL
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTL 459



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +  ++  +G+ PD ITYN +I GY        A  L  ++    ++P 
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    +  RM +A  +F K+L++G   +V+ ++ +IDG+  + N++ AF + +
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ V+++ L+ G C+ G +EEA           + PD ++Y  LI GY + G
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A  + D ML  G  P      TL  YN
Sbjct: 503 DIKDAFXVRDEMLSIGFNP------TLLTYN 527



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 99/176 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   +  A  LF ++ D+G+ PD+I +N +I G+C+   ++ A  L +++    + P
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP 451

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  L+   C+EG++++A M+  +M  +G K + ++Y+ LI GY +  ++K AF V 
Sbjct: 452 DEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVR 511

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           +EM     +P +++Y+ LI  LCK    + A       ++  + PD  TY  LI G
Sbjct: 512 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 96/191 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +G+EP  +TY ++I      NR+ EA  LFEK+    + P+ I F  +ID
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G ++ A M+  +M  K    + VT++ L+ G  +   ++ A  + +EM    I P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + +SY+ LI G  +RG +++A       L     P ++TY  LI+  CK      A +L 
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 191 DSMLRNGIMPD 201
             M+  GI PD
Sbjct: 547 KEMVNKGISPD 557



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 76/136 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L  ++  + + PD +T+NT++ G C   +++EA  L +++    +KP+ I++ 
Sbjct: 433 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYN 492

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  + + G + DA  +  +ML  G    ++TY+ LI    K+Q    A ++ +EM   
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552

Query: 127 NISPNIVSYSILIDGL 142
            ISP+  +Y  LI+G+
Sbjct: 553 GISPDDSTYLSLIEGM 568


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +  A +L+  +    + PD+ TY  +I G C+  RLDEA Q+F  +      PN
Sbjct: 267 FVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPN 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI  FCK  R++D T +F +M +KG  AN +TY+ LI GY        A +V+ 
Sbjct: 327 EVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFN 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      P+I +Y++L+DGLC  G +E+AL  F       +  ++VTY I+I+G CK G
Sbjct: 387 QMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVG 446

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A  L+ S+   G+ P+ +  +T+
Sbjct: 447 KVEDAFDLFCSLFSKGMKPNVITYTTM 473



 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+++F Q+ D G+ P+++TYN+++ G C + R  +A  L   +    ++PN
Sbjct: 197 LCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPN 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITFT LIDAF K G++ +A  ++  M++     +V TY+ LI+G      +  A  ++ 
Sbjct: 257 VITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFY 316

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N   PN V+Y+ LI G CK   +E+    F+      L+ + +TY +LI+GYC  G
Sbjct: 317 LMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVG 376

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP  A ++++ M      PD    + L D
Sbjct: 377 RPDVAQEVFNQMGSRRAPPDIRTYNVLLD 405



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 119/206 (57%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   ++ AL LF Q+   G  P+++TY T+I   C    L+ AV++F ++    ++PN 
Sbjct: 163 CHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNV 222

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  L+   C+ GR  DA  +   M+++G + NV+T++ LID + K   +  A ++Y+ 
Sbjct: 223 VTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKV 282

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M + ++ P++ +Y+ LI+GLC  G ++EA   F+    N   P+ VTY  LI G+CK+ R
Sbjct: 283 MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR 342

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +  +++  M + G++ + +  + L
Sbjct: 343 VEDGTKIFYEMSQKGLVANTITYTVL 368



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 111/195 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
             G++   G EPD++T+ +++ G+C  NR+++A+ LF+++  +  +PN +T+T LI   C
Sbjct: 139 FLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   ++ A  +F++M + G + NVVTY+ L+ G  +      A  +  +M +  I PN++
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LID   K G + EA   +   +   + PDV TY  LI G C  GR  EA Q++  M
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318

Query: 194 LRNGIMPDGLLLSTL 208
             NG  P+ +  +TL
Sbjct: 319 ESNGYYPNEVTYTTL 333



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 113/195 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++F  +   G  P+ +TY T+I G+C   R+++  ++F +++   L  N+IT+T
Sbjct: 307 RLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYT 366

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI  +C  GR D A  +F++M  +    ++ TY+ L+DG   +  ++ A  +++ M + 
Sbjct: 367 VLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR 426

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  NIV+Y+I+I G+CK G +E+A   F       + P+V+TY  +I G+C+ G   EA
Sbjct: 427 EMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA 486

Query: 187 MQLYDSMLRNGIMPD 201
             L+  M  +G +P+
Sbjct: 487 DALFKKMKEDGFLPN 501



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 114/210 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K    D  + LF Q+   G+ P + T N ++   C  ++   A     K+  +  +P
Sbjct: 91  VIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEP 150

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT L+  FC   R++DA  +F +++  G + NVVTY+ LI    K++++  A +++
Sbjct: 151 DLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIF 210

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +N I PN+V+Y+ L+ GLC+ G   +A +     +   + P+V+T+  LI  + K 
Sbjct: 211 NQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKV 270

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  EA +LY  M++  + PD    + L +
Sbjct: 271 GKIMEAKELYKVMIQMSVYPDVFTYTALIN 300



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 107/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + AL LF ++      P I+ +  ++     + R D  + LFE++  + + P   T  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+++  C+  +   A+    KM++ G + ++VT++ L+ G+     ++ A  +++++   
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+Y+ LI  LCK   +  A+  F+   DN + P+VVTY  L+ G C+ GR ++A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M++ GI P+ +  + L D
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALID 265



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 92/163 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   K+F +++ +GL  + ITY  +I GYC + R D A ++F ++   +  P+  
Sbjct: 339 KSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIR 398

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+D  C  G ++ A M+F  M ++    N+VTY+ +I G  K   ++ AFD++  +
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSL 458

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
               + PN+++Y+ +I G C+RG + EA   F    ++  LP+
Sbjct: 459 FSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 22/211 (10%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNR-----------------LDEAVQLFEKLTCVQLK 59
           Q+++ G  P +      +CG+C   R                  +EA+ LF ++   +  
Sbjct: 25  QISNHGASPTLS-----LCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPL 79

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ + FT L+    K  R D    +F +M   G    + T + +++   +S     A   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M +    P++V+++ L+ G C    +E+AL  F   +     P+VVTY  LI   CK
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 A+++++ M  NGI P+ +  ++L  
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVS 230


>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
 gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+++  ++   G+ P++++YNT+I G+C+   L  A +L   +    L+PN
Sbjct: 209 LCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPN 268

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  FCKEG++ +A   FS+M       N VTY+ LI+GY +  N   A  VYE
Sbjct: 269 VVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYE 328

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N +  +I++Y+ LI GLCK G  ++A +        +L+P+  TY+ LI G C   
Sbjct: 329 EMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARK 388

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A QLY SM+R+G  P+
Sbjct: 389 NSDRAFQLYKSMVRSGCHPN 408



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 105/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++ D G  P + + N  +      +R+D A+  + ++   ++ PNS TF +++ 
Sbjct: 148 ATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLS 207

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G+++ A  +  +M   G   NVV+Y+ LI G+     +  A  +   M +N + P
Sbjct: 208 ALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEP 267

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+++ LI G CK G + EA   F      ++ P+ VTY  LI GY + G    A ++Y
Sbjct: 268 NVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVY 327

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M+RNG+  D L  + L
Sbjct: 328 EEMMRNGVKADILTYNAL 345



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 95/172 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A KL   +   GLEP+++T+N++I G+C   +L EA + F ++  + + PN++T+  
Sbjct: 250 LSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNT 309

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ + + G  + A  ++ +M+  G KA+++TY+ LI G  K    K A  + +E+ + N
Sbjct: 310 LINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKEN 369

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + PN  +YS LI G C R   + A   +   + +   P+  T+ +L   + K
Sbjct: 370 LVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVK 421



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 91/198 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A + F ++    + P+ +TYNT+I GY  +   + A +++E++    +K + +
Sbjct: 281 KEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADIL 340

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CKEG+   A  +  ++ ++    N  TYS LI G    +N   AF +Y+ M
Sbjct: 341 TYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSM 400

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN  ++ +L     K    E A           +  D  T   +  G C+ G+ 
Sbjct: 401 VRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKE 460

Query: 184 TEAMQLYDSMLRNGIMPD 201
             AM+L   M    ++P+
Sbjct: 461 NLAMKLCHEMEARRLIPE 478



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 45/105 (42%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A  L  +L    L P+  TY+ +I G C+    D A QL++ +      PN
Sbjct: 349 LCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPN 408

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
             TF +L  AF K    + A  +   M  +   ++  T   + DG
Sbjct: 409 EQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDG 453


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A  L G +   G+ PD+ TY   I G C   R+ +A+++FE++    L PN++
Sbjct: 161 KASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTV 220

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
             T LIDA CKEG +     +  +M  +G KA++V Y+ L++G+ + ++MK+A D+ EEM
Sbjct: 221 VLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM 280

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ + P+ V+Y+ LIDG CK G ++ A+       D  +  D VTY  LI G  KAGR 
Sbjct: 281 RKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRS 340

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A ++   M+  G+ PD    + + D
Sbjct: 341 VDAERILCEMMEAGLQPDNTTYTMVID 367



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + A L+L  ++  RG++ D++ YN ++ G+C +  +  A  + E++    LKP+ +
Sbjct: 231 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 290

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG +D A  M  +M ++G   + VTY+ LI G  K+     A  +  EM
Sbjct: 291 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEM 350

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+++ID  CK G ++          +    P +VTY +++ G+C  G+ 
Sbjct: 351 MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQM 410

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L ++ML  G+ P+ +  + L D
Sbjct: 411 KNADMLLNAMLNIGVCPNDITYNILLD 437



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 119/215 (55%), Gaps = 4/215 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA  +  ++   GL+PD +TY T+I G C    LD A+++ ++++   +  + +T+T 
Sbjct: 270 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 329

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K GR  DA  +  +M+E G + +  TY+ +ID + K+ ++K+ F   +EM    
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 389

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P IV+Y+++++G C  G M+ A    +  L+  + P+ +TY IL+ G+CK G+  +  
Sbjct: 390 KNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 449

Query: 188 QLYDSMLRNGIMPD-GLLLSTLADYNLQSSGSQEH 221
           +L  +    G++ D G+  S + ++  + S    H
Sbjct: 450 ELKSA---KGMVSDFGVYTSLINEFVKKKSAKSYH 481



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   +  L D G+ P+   +N ++       +L  A  +F+++    ++P  +TF  L+ 
Sbjct: 98  AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 157

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +++A  +   M + G   +V TY   I G  K+  ++ A +++EEMCE  ++P
Sbjct: 158 GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNP 217

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V  + LID  CK G +   L          +  D+V Y  L+ G+C+      A  + 
Sbjct: 218 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 277

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M ++G+ PD +  +TL D
Sbjct: 278 EEMRKDGLKPDKVTYTTLID 297



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 81/143 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+++  +++D G+  D +TY  +I G     R  +A ++  ++    L+P++ 
Sbjct: 301 KEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNT 360

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++IDAFCK G +        +M  KG    +VTY+ +++G+     MK+A  +   M
Sbjct: 361 TYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 420

Query: 124 CENNISPNIVSYSILIDGLCKRG 146
               + PN ++Y+IL+DG CK G
Sbjct: 421 LNIGVCPNDITYNILLDGHCKHG 443



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)

Query: 40  LNRLD---EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           +NRL    EA   +  L    + P +  F +L+    + G++  A  +F +ML +G +  
Sbjct: 89  MNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPT 148

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           VVT++ L+ G  K+ ++ +A  +   M +  I+P++ +Y   I GLCK G +++A+  F 
Sbjct: 149 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 208

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              +  L P+ V    LI  +CK G  T  ++L   M   G+  D
Sbjct: 209 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKAD 253


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 118/210 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ PDI TYN++I   C+L        L  ++   ++ P+
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  ++DA CKEG++ +A  +  KM+++G + NVVTY+ L+DG+     M  A  V++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN++SY+ LI+G CK   +++A+Y F       L+PD VTY+ LI G C   
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 390

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+    +P+ +    L DY
Sbjct: 391 RLQDAIALFHEMVACSQIPNLVTYRILLDY 420



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 118/202 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +G  P++I+YNT+I GYC + R+D+A+ LF ++   +L P+++T++ 
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C   R+ DA  +F +M+      N+VTY  L+D   K++ +  A  + + +  +N
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I   +I IDG+C+ G +E A   F       L PDV TY+I+I G C+ G   EA 
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
           +L+  M  NG   +G + +T+ 
Sbjct: 502 KLFREMDENGCTLNGCIYNTIT 523



 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +  ++  RG+EP+++TY  ++ G+C L+ +DEAV++F+ + C    PN
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I++  LI+ +CK  R+D A  +F +M  +    + VTYS LI G    + ++ A  ++ 
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   +  PN+V+Y IL+D LCK   + EA+        ++L PD+    I I G C+AG
Sbjct: 401 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L+ ++   G+ PD
Sbjct: 461 ELEAARDLFSNLSSKGLQPD 480



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +  AA++L G +  +  +P++  YNTII   C   ++ EA  LF ++    + P+
Sbjct: 176 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 235

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI A C          + ++M++     +VV+++ ++D   K   +  A DV +
Sbjct: 236 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 295

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ L+DG C    M+EA+  F   +    +P+V++Y  LI GYCK  
Sbjct: 296 KMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM L+  M R  ++PD +  STL
Sbjct: 356 RIDKAMYLFGEMCRQELIPDTVTYSTL 382



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 109/196 (55%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C       L  ++ D  + PD++++NT++   C   ++ EA  + +K+    ++PN +T+
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T L+D  C    MD+A  +F  M+ KG   NV++Y+ LI+GY K Q +  A  ++ EMC 
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 369

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P+ V+YS LI GLC    +++A+  FH  +    +P++VTY IL+   CK     E
Sbjct: 370 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 429

Query: 186 AMQLYDSMLRNGIMPD 201
           AM L  ++  + + PD
Sbjct: 430 AMALLKAIEGSNLDPD 445



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ P+I T + +I  +C LNR+  A  +  K+  +  +P++ TFT
Sbjct: 76  HHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFT 135

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI     EG++ +A  +F KM+ +G + +VVTY  LI+G  K  N  +A  +   M + 
Sbjct: 136 TLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+ +Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C        
Sbjct: 196 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 255

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M+ + IMPD +  +T+ D
Sbjct: 256 ATLLNEMVDSKIMPDVVSFNTVVD 279



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 93/194 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F ++      P  + +N ++     +      + L  ++    + PN  T  I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + +  T++ LI G +    +  A  ++++M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y  LI+GLCK G    A+      +  +  P+V  Y  +I   CK  + TEA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 188 QLYDSMLRNGIMPD 201
            L+  M+  GI PD
Sbjct: 222 NLFSEMVTKGISPD 235



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 85/183 (46%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +++N         N +D A+  F ++  +Q  P+++ F  L+ +  K         +  +
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G   N+ T   LI+ +     +  AF V  ++ +    P+  +++ LI G+   G 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EAL+ F   +     PDVVTY  LI G CK G  + A++L  SM++    P+    +T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 208 LAD 210
           + D
Sbjct: 207 IID 209



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A+ L   +    L+PDI   N  I G C    L+ A  LF  L+   L+P+
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I+  C+ G +D+A+ +F +M E G   N   Y+ +  G+ ++     A  + +
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 540

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S +  + ++ +  L   GL
Sbjct: 541 EMVARGFSADASTMTLFVKMLSDDGL 566


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 1/213 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +F Q+ DRG++PD  TYN +I GY S  +  E VQ+ E+++   L+P+ IT+ +
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK GR  +A + F  M  KG K +V  Y+ L+ GY     +       + M  N 
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SPN   ++I+     K+ ++EEA++ F+      L PDVV++  LI   CK GR  +A+
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             ++ M+  G+ P+  + S+L  Y L + G  E
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLV-YGLCTVGKWE 423



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 124/219 (56%), Gaps = 5/219 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A +L   +   G+ P++I+YNT++ G+C   R+DEA +L + +    LKPN
Sbjct: 451 LCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TIL+  +CK  R+DDA  +F +ML KG    V TY+ ++ G F++     A ++Y 
Sbjct: 511 EFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL 570

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCK 179
            M  +    +I +Y+I+++GLCK   ++EA   F   C+ D  L  D VT+ I+I    K
Sbjct: 571 NMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL--DSVTFNIMIGALLK 628

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            GR  +AM L+ ++   G++PD +    +A+ NL   GS
Sbjct: 629 GGRKEDAMDLFATISAYGLVPDVVTYRLIAE-NLIEEGS 666



 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 105/185 (56%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++++ G  PD++ YNT+I G+    ++++A  LF ++    + PN +T+T +ID  CK  
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A  +F +M+++G K +  TY+CLI GY  +   K    + EEM  + + P+ ++Y+
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           +L+D LCK G   EA   F       + PDV  YAIL+ GY   G  +E     D M+ N
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 197 GIMPD 201
           G+ P+
Sbjct: 331 GVSPN 335



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 106/190 (55%), Gaps = 1/190 (0%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P+  TY+ +I  +C + RL+     F  +     + N I  + L+   C   R+D+AT
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145

Query: 83  -MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++  +M E G   +VV Y+ +I+G+F+   ++ A++++ EM +  I PN+V+Y+ +IDG
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK  +++ A   F   +D  + PD  TY  LI GY   G+  E +Q+ + M  +G+ PD
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265

Query: 202 GLLLSTLADY 211
            +  + L DY
Sbjct: 266 CITYALLLDY 275



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 6/209 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A+ +F ++  +GL PD++++  +I   C L R+D+AV  F ++    + PN  
Sbjct: 348 KKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIF 407

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ L+   C  G+ + A  +F ++L++G   + V ++ L+        +  A  + + M
Sbjct: 408 VFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM 467

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN++SY+ L+ G C  G ++EA       + N L P+  TY IL+RGYCKA R 
Sbjct: 468 IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
            +A  L+  ML  G+ P       +A YN
Sbjct: 528 DDAYSLFREMLMKGVTP------VVATYN 550



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 2/217 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
            L+     FG +   G   ++I  + ++ G C   R+DEA   L  +++     P+ + +
Sbjct: 105 RLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAY 164

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +I+ F +EG+++ A  +F +M+++G   NVVTY+ +IDG  K+Q +  A  V+++M +
Sbjct: 165 NTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMID 224

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P+  +Y+ LI G    G  +E +        + L PD +TYA+L+   CK GR  E
Sbjct: 225 RGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCRE 284

Query: 186 AMQLYDSMLRNGIMPDGLLLST-LADYNLQSSGSQEH 221
           A   +DSM R GI PD  + +  L  Y  + + S+ H
Sbjct: 285 ARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 104/185 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +LF ++ D+G+  D + +NT++C  C+  R+ EA +L + +  V ++PN I++  L
Sbjct: 423 EKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTL 482

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C  GR+D+A  +   M+  G K N  TY+ L+ GY K++ +  A+ ++ EM    +
Sbjct: 483 VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P + +Y+ ++ GL + G   EA   +   +++    D+ TY I++ G CK     EA +
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602

Query: 189 LYDSM 193
           ++  +
Sbjct: 603 MFRRL 607



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 103/197 (52%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           +++  +++  GLEPD ITY  ++   C   R  EA   F+ +    +KP+   + IL+  
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +  +G + +       M+  G   N   ++ +   Y K   ++ A  ++ +M +  +SP+
Sbjct: 311 YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +VS+  LID LCK G +++A+  F+  ++  + P++  ++ L+ G C  G+  +A +L+ 
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 192 SMLRNGIMPDGLLLSTL 208
            +L  GI  D +  +TL
Sbjct: 431 EVLDQGICVDAVFFNTL 447



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 107/193 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F Q+ + G+ P+I  +++++ G C++ + ++A +LF ++    +  +
Sbjct: 381 LCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVD 440

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ F  L+   C EGR+ +A  +   M+  G + NV++Y+ L+ G+  +  +  A  + +
Sbjct: 441 AVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLD 500

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N + PN  +Y+IL+ G CK   +++A   F   L   + P V TY  ++ G  + G
Sbjct: 501 VMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTG 560

Query: 182 RPTEAMQLYDSML 194
           R +EA +LY +M+
Sbjct: 561 RFSEANELYLNMI 573



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 7/179 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF ++  +G+ P + TYNTI+ G     R  EA +L+  +   + K +  
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+++  CK   +D+A  MF ++  K P+ + VT++ +I    K    + A D++  +
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEE------ALYAFHCALDNHLLPDVVTYAILIRG 176
               + P++V+Y ++ + L + G + E      A+     A ++H+L + +   +L RG
Sbjct: 643 SAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHML-NALVRRLLHRG 700



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 88/188 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +      A +L+  + +   + DI TYN I+ G C  N +DEA ++F +L     + +
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+TF I+I A  K GR +DA  +F+ +   G   +VVTY  + +   +  ++     ++ 
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFS 675

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++  +PN    + L+  L  RG +  A    +   + +   +  T ++LI  Y +  
Sbjct: 676 AMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGE 735

Query: 182 RPTEAMQL 189
               A  L
Sbjct: 736 YQPHAKSL 743



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFK------SQNMKSAFDVYEEMCENNISPN 131
           +D+A  +F ++L     A+V  ++ L+    +      S+ + S F      C + ++PN
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ-LY 190
             +YSILI   C+ G +E    AF   L      +V+  + L++G C A R  EA   L 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G  PD +  +T+
Sbjct: 150 LRMSEFGCPPDVVAYNTV 167



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 3/129 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A+ LF  ++  GL PD++TY  I         L E   LF  +      PN
Sbjct: 626 LLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPN 685

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ---NMKSAFD 118
           S     L+      G +  A +   K+ EK       T S LI  Y + +   + KS  +
Sbjct: 686 SHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPE 745

Query: 119 VYEEMCENN 127
            Y  + E N
Sbjct: 746 KYRFLIEAN 754


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++  +G  PD  TY+ +I   C   ++++A  LF+++  V + P+  T+TI
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 263

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A  +F +M   G    VVTY+ LI  Y K++ +  A D++  M +  
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL----------------YAFHCALDNHLLPDVVTYA 171
             PN V+Y  L+DGLCK G + +A                 + F C   + L P+VVTY 
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 383

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +   A +L D+ML +G  P+ ++   L D
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 422



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 19/224 (8%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   ++ A  LF ++   G+ PD+ TY  +I  +C    +++A  LFE++  V   P  
Sbjct: 234 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T LI A+ K  ++  A  +F +M++ G + N VTY  L+DG  K+ N+  AF+VY +
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 123 M--------------CEN--NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           +              CE+   ++PN+V+Y  L+DGLCK   ++ A       L +   P+
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + Y  LI G+CKAG+   A +++  M + G +P     ++L D
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 457



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 107/189 (56%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+++TY  ++ G C  +++D A +L + +     +PN I +  LID FCK G++D A 
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F +M + G   +V TY+ LID  FK   +  A  V  +M +++ +PN+V+Y+ +IDGL
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C+ G  E+AL       +    P+VVTY  LI G  KAG+   ++ L+  M R G  P+ 
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554

Query: 203 LLLSTLADY 211
           +    L ++
Sbjct: 555 VTYRVLINH 563



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 102/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L   +   G EP+ I Y+ +I G+C   ++D A ++F ++T     P+
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 448

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID   K+GR+D A  + S+ML+     NVVTY+ +IDG  +    + A  +  
Sbjct: 449 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 508

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   SPN+V+Y+ LIDGL K G ++ +L  F         P+ VTY +LI   C AG
Sbjct: 509 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 568

Query: 182 RPTEAMQLYDSM 193
              +A  L   M
Sbjct: 569 LLDKARLLLGEM 580



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 16/224 (7%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ----- 57
           +K   +  A  +F ++ D G  P+ +TY  ++ G C    + +A +++ KL         
Sbjct: 304 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 363

Query: 58  -----------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
                      L PN +T+  L+D  CK  ++D A  +   ML  G + N + Y  LIDG
Sbjct: 364 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 423

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           + K+  + SA +V+ +M +    P++ +Y+ LID + K G ++ A+      L +   P+
Sbjct: 424 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 483

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           VVTY  +I G C+ G   +A++L   M   G  P+ +  + L D
Sbjct: 484 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 527



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 33/225 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D+A ++F Q+T  G  P + TY ++I       RLD A+++  ++      PN +
Sbjct: 426 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVV 485

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID  C+ G  + A  + S M EKG   NVVTY+ LIDG  K+  +  + D++ +M
Sbjct: 486 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 545

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNH------ 162
                SPN V+Y +LI+ LC  GL+++A               L  + CA+         
Sbjct: 546 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA 605

Query: 163 ------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
                        +P    Y +LI  + KAGR   AM+L+  M+ 
Sbjct: 606 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + ALKL   + ++G  P+++TY  +I G     ++D ++ LF +++     PN +T+ +L
Sbjct: 501 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 560

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G +D A ++  +M +      +  Y C I G+  S++  ++  + EEM     
Sbjct: 561 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGT 618

Query: 129 SPNIVSYSILIDGLCKRGLMEEA--LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            P    Y +LID   K G +E A  L+     + + +  D   YA LI+  C A +  EA
Sbjct: 619 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEA 678

Query: 187 MQLYDSMLRNGIMPD 201
            +LY  M R G +P+
Sbjct: 679 FRLYSEMTRRGFVPE 693



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 97/187 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K++G++       + +         C + + D+A QL +++      P++ T++ 
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A ++F +M   G   +V TY+ LID + K+  ++ A  ++EEM    
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP +V+Y+ LI    K   + +A   FH  +D    P+ VTY  L+ G CKAG  ++A 
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 188 QLYDSML 194
           ++Y  ++
Sbjct: 349 EVYAKLI 355



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 95/255 (37%), Gaps = 41/255 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  + D A+    ++      P+++TY T++ G+    +L    ++   +      PN
Sbjct: 52  LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------ 115
              F  L+ ++C E     A  + ++M   G     V Y+  I      + + S      
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 171

Query: 116 -----------------------------------AFDVYEEMCENNISPNIVSYSILID 140
                                              AF + +EM      P+  +YS +I 
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LC    +E+A   F       + PDV TY ILI  +CKAG   +A  L++ M   G  P
Sbjct: 232 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291

Query: 201 DGLLLSTLADYNLQS 215
             +  + L    L++
Sbjct: 292 TVVTYTALIHAYLKA 306



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +    +I G    +  DEA+    ++ C    PN +T+  L+  F K+ ++     + 
Sbjct: 41  DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 100

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + M+ +G   N   ++ L+  Y   ++   A+ +   M      P  V Y+I I  +C +
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 160

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  L++ A   +   L  + + + V  A   R  C  G+  +A QL   M+R G +
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 220

Query: 200 PD 201
           PD
Sbjct: 221 PD 222



 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 2/122 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QLKPNSITFTI 67
           A+L +  ++   G  P    Y  +I  +    RL+ A++L +++  V   +K ++  +  
Sbjct: 605 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 664

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C   ++++A  ++S+M  +G    +  + CLI G  + +    A  +   +C   
Sbjct: 665 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724

Query: 128 IS 129
           ++
Sbjct: 725 VN 726



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 3/121 (2%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M E G   +  T  C      K      A D+ E     +   + V  + +I GL +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASY 57

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
            +EA+   H    N  +P+VVTY  L+ G+ K  +     ++ + M+  G  P+  L ++
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 208 L 208
           L
Sbjct: 118 L 118


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 115/191 (60%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           LTD GL+PD++TY  +ICG+C +  ++EA++L   L     + N I +++L+ + CK G+
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +D+A  +  +M     + ++VTYS LI G  K   ++ A  +Y+EMC N I PN  ++S 
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           ++ GLC++G++ +A   F   + ++L PDV  Y I+I GY K G   EA++LY  +    
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 198 IMPDGLLLSTL 208
           I P  +  ++L
Sbjct: 462 ITPSIVTFNSL 472



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 121/210 (57%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-LTCVQLKP 60
           LI    ++ AL+L   +  +GL+PD++TY  +  G+  L  +  A ++ +K LT   LKP
Sbjct: 230 LIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKP 289

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T+LI   C+ G +++A  +   +L  G + NV+ YS L+    K   +  A  + 
Sbjct: 290 DLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLL 349

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM  NN+ P++V+YSILI GLCK+G +++A+  +     N + P+   ++ +++G C+ 
Sbjct: 350 YEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEK 409

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G  ++A   +DS++ + + PD  L + + D
Sbjct: 410 GMLSDARMYFDSLIMSNLRPDVTLYNIMID 439



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL+L  ++    L+PD++TY+ +I G C   ++ +A+QL++++   ++ PN
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S   + ++   C++G + DA M F  ++    + +V  Y+ +IDGY K  +++ A  +Y+
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 122 EMCENNISPNIVSYSILIDGLCK-------RGLMEE--------------ALYAFHCALD 160
            + +  I+P+IV+++ LI G CK       R L+E                L   +C   
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 161 N----HLL----------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
           N    H L          P VVTY ++I+G CK  +  E++QL + M   G+ PD +  +
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 207 TL 208
           T+
Sbjct: 576 TI 577



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A   F  L    L PD+  YN +I GY  L  ++EAV+L+++L    + P+ +TF  
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FCK  ++ +A  +   +   G + + VTY+ L++ Y +  N+    ++  EM   +
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P +V+Y+++I GLCK+  +EE++          L PD +TY  +I+ +CKA    +A 
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L D ML + + P      T A YN+   G
Sbjct: 592 ELLDDMLIHNLEP------TPATYNVLIDG 615



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 121/230 (52%), Gaps = 35/230 (15%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   ++ A++L+ +L D+ + P I+T+N++I G+C   ++ EA +L E +    L+P++
Sbjct: 442 VKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501

Query: 63  ITFTILIDAFCKEG-----------------------------------RMDDATMMFSK 87
           +T+T L++A+C+EG                                   +++++  +   
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  KG   + +TY+ +I  + K+++M+ AF++ ++M  +N+ P   +Y++LIDGLC+ G 
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +E+A        D ++    V Y  +I+ +C  G    A++++  M+  G
Sbjct: 622 VEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ +++L   +  +GL PD ITYNTII  +C    + +A +L + +    L+P 
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPT 605

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LID  C+ G ++DA  +   + ++      V Y+ +I  +    + + A  V+ 
Sbjct: 606 PATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFH 665

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E     +I  YS +I+ LCKR L+ EA Y F   L + + PD   + +++  + +AG
Sbjct: 666 QMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAG 725

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                 +L   M++ G++ D
Sbjct: 726 HVHSVFELLAVMIKFGLLHD 745



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 1/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H D    ++  + D G      T + I+ G C  +R  +AV    +    +  P+ ++F 
Sbjct: 130 HTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFN 189

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++  +CK G  D A   F  ML+ G   +  +Y+ LI G   + +M+ A ++  +M + 
Sbjct: 190 TIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQ 249

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTE 185
            + P++V+Y I+  G    GLM  A       L D  L PD+VTY +LI G+C+ G   E
Sbjct: 250 GLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEE 309

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A++L   +L +G   + +L S L
Sbjct: 310 ALRLRRDLLSSGFQLNVILYSVL 332



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E +++   +L  ++  + +EP ++TY  +I G C   +L+E+VQL E +    L P+ I
Sbjct: 513 EEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI 572

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I  FCK   M  A  +   ML    +    TY+ LIDG  +  +++ A  V   +
Sbjct: 573 TYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSL 632

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + NI+   V+Y+ +I   C +G  + A+  FH  ++      +  Y+ +I   CK    
Sbjct: 633 QDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLI 692

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA   +  ML +G+ PD
Sbjct: 693 NEAKYYFCIMLSDGVSPD 710



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 18/170 (10%)

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA-------------- 116
              ++ R  D  ++  +ML++   + +V  +  +    K QN++ +              
Sbjct: 72  VLARKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHT 131

Query: 117 ---FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
              +DVY ++ ++    +  + SI++DGLC +    +A+            P VV++  +
Sbjct: 132 DIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTI 191

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  YCK G    A   +  ML+ GI+PD    + L  + L  +GS E  +
Sbjct: 192 MSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILI-HGLIVAGSMEEAL 240


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA ++F +ML+KG   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A       +   L PD  TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG K +  TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G  P
Sbjct: 396 DVWTGSKLLKEMQRDGYKP 414



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 101/191 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A  +++EM +  + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M+  G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 202 GLLLSTLADYN 212
               +TL D N
Sbjct: 311 KFTYTTLIDGN 321



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 94/192 (48%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           T   L  DI  ++ +I  Y     L +A++ +      + +    T   +++   K    
Sbjct: 58  TKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYF 117

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
                 + + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L
Sbjct: 118 KLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           ++G  K G + E     +    + + PDV TY++LI G CK  +  +A  L+D ML  G+
Sbjct: 178 MNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGL 237

Query: 199 MPDGLLLSTLAD 210
           +P+G+  +TL D
Sbjct: 238 VPNGVTFTTLID 249



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL+PD  TY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYKPSVVT 418


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 121/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA ++F +ML+KG   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A       +   L PD  TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG K +  TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G  P
Sbjct: 396 DVWXGSKLLKEMQRDGYKP 414



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 101/191 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A  +++EM +  + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M+  G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 202 GLLLSTLADYN 212
               +TL D N
Sbjct: 311 KFTYTTLIDGN 321



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 92/185 (49%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + E     +    + + PDV TY++LI G CK  +  +A  L+D ML  G++P+G+  
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL+PD  TY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++     + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYKPSVVT 418


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++  +G  PD  TY+ +I   C   ++++A  LF+++  V + P+  T+TI
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A  +F +M   G    VVTY+ LI  Y K++ +  A D++  M +  
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL----------------YAFHCALDNHLLPDVVTYA 171
             PN V+Y  L+DGLCK G + +A                 + F C   + L P+VVTY 
Sbjct: 558 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 617

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +   A +L D+ML +G  P+ ++   L D
Sbjct: 618 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 90/154 (58%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+++TY  ++ G C  +++D A +L + +     +PN I +  LID FCK G++D A 
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 668

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F +M + G   +V TY+ LID  FK   +  A  V  +M +++ +PN+V+Y+ +IDGL
Sbjct: 669 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 728

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           C+ G  E+AL       +    P+VVTY  LI G
Sbjct: 729 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ----- 57
           +K   +  A  +F ++ D G  P+ +TY  ++ G C    + +A +++ KL         
Sbjct: 538 LKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 597

Query: 58  -----------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
                      L PN +T+  L+D  CK  ++D A  +   ML  G + N + Y  LIDG
Sbjct: 598 DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 657

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           + K+  + SA +V+ +M +    P++ +Y+ LID + K G ++ A+      L +   P+
Sbjct: 658 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 717

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           VVTY  +I G C+ G   +A++L   M   G  P+ +  + L D   QS
Sbjct: 718 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   G  P ++TY  +I  Y    ++ +A  +F ++     +PN +T+  
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 567

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKA----------------NVVTYSCLIDGYFKSQ 111
           L+D  CK G +  A  +++K++     A                NVVTY  L+DG  K+ 
Sbjct: 568 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 627

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
            +  A ++ + M  +   PN + Y  LIDG CK G ++ A   F        LP V TY 
Sbjct: 628 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 687

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI    K GR   AM++   ML++   P+ +  + + D
Sbjct: 688 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 726



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 80/141 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L   +   G EP+ I Y+ +I G+C   ++D A ++F ++T     P+
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID   K+GR+D A  + S+ML+     NVVTY+ +IDG  +    + A  +  
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 742

Query: 122 EMCENNISPNIVSYSILIDGL 142
            M E   SPN+V+Y+ LIDGL
Sbjct: 743 LMEEKGCSPNVVTYTALIDGL 763



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 97/187 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K++G++       + +         C + + D+A QL +++      P++ T++ 
Sbjct: 403 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 462

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A ++F +M   G   +V TY+ LID + K+  ++ A  ++EEM    
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP +V+Y+ LI    K   + +A   FH  +D    P+ VTY  L+ G CKAG  ++A 
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582

Query: 188 QLYDSML 194
           ++Y  ++
Sbjct: 583 EVYAKLI 589



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 47/243 (19%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICG------------------------- 36
           L++  + D A+    ++      P+++TY T++ G                         
Sbjct: 286 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 345

Query: 37  ----------YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR------MDD 80
                     YC+      A +L  ++T     P  + + I I + C + +      +D 
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 405

Query: 81  ATMMFSKMLEKG---PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           A  ++ +ML       K NV  ++  + G  K      AF + +EM      P+  +YS 
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSK 462

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +I  LC    +E+A   F       + PDV TY ILI  +CKAG   +A  L++ M   G
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522

Query: 198 IMP 200
             P
Sbjct: 523 CSP 525



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +    +I G    +  DEA+    ++ C    PN +T+  L+  F K+ ++     + 
Sbjct: 275 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 334

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + M+ +G   N   ++ L+  Y   ++   A+ +   M      P  V Y+I I  +C +
Sbjct: 335 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 394

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  L++ A   +   L  + + + V  A   R  C  G+  +A QL   M+R G +
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454

Query: 200 PD 201
           PD
Sbjct: 455 PD 456



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 7/204 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +L++ C      + AL+  G+L D G  P  +TYN ++    S  ++D   ++ ++++  
Sbjct: 179 VLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES 238

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
               +  T      A CKEGR  DA  M  +   +  K + V  + +I G  ++     A
Sbjct: 239 GFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEA 295

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
                 M  N+  PN+V+Y  L+ G  K+  +       +  +     P+   +  L+  
Sbjct: 296 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHS 355

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           YC       A +L + M   G  P
Sbjct: 356 YCNEKDYAYAYKLLNRMTTCGCPP 379



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 3/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++   C     +EA++   +L     +P+ +T+  L+      G++D    +  +M E
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE 237

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   +  T  C      K      A D+ E     +   + V  + +I GL +    +E
Sbjct: 238 SGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDE 294

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+   H    N  +P+VVTY  L+ G+ K  +     ++ + M+  G  P+  L ++L
Sbjct: 295 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1164

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 117/190 (61%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PD+I+Y+T+I GYC    LD+  +L EK+    LKPNS T+  +I   C+  ++ +
Sbjct: 698 KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAE 757

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A   FS+M+ +G   + + Y+ L+DG+ K  ++++A   + EM   +I+P++++Y+ +I 
Sbjct: 758 AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 817

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G M EA   FH  L   L PD++T+  L+ GYCKAG   +A ++++ M++ G  P
Sbjct: 818 GFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP 877

Query: 201 DGLLLSTLAD 210
           + +  +TL D
Sbjct: 878 NVVTYTTLID 887



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 121/210 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L + C L  A + F ++  +G+ PD I Y T++ G+C    +  A + F ++    + P
Sbjct: 748 LLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITP 807

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I  FC+ G M +A  +F +ML +G + +++T++ L++GY K+ ++K AF V+
Sbjct: 808 DVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVH 867

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +   SPN+V+Y+ LIDGLCK G ++ A    H      L P++ TY  ++ G CK+
Sbjct: 868 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA++L       G+  D +  +TL D
Sbjct: 928 GNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 113/209 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  +++ A+KL G+    GL  D +TY T++  YC    +D+A ++  ++    L+P 
Sbjct: 924  LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPT 983

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +TF +L++ FC  G ++D   + + ML KG   N  T++CL+  Y    N+K+A  +Y+
Sbjct: 984  IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +MC   + P+  +Y  L+ G C    M+EA + F           V TY++LI+G+ K  
Sbjct: 1044 DMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA +++D M R+G+  D  +    +D
Sbjct: 1104 KFVEAREIFDQMRRDGLAADKEIFDFFSD 1132



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 109/199 (54%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A KLF ++  RGLEPDIIT+  ++ GYC    + +A ++   +      PN +T+T LID
Sbjct: 828  AGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLID 887

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              CKEG +D A  +  +M + G + N+ TY+ +++G  KS N++ A  +  E     ++ 
Sbjct: 888  GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 947

Query: 131  NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + V+Y+ L+D  CK G M++A       L   L P +VT+ +L+ G+C  G   +  +L 
Sbjct: 948  DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007

Query: 191  DSMLRNGIMPDGLLLSTLA 209
            + ML  GI P+    + L 
Sbjct: 1008 NWMLAKGIAPNATTFNCLV 1026



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 103/199 (51%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K  H+  A ++   +   G  P+++TY T+I G C    LD A +L  ++  + L+PN  
Sbjct: 856  KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  +++  CK G +++A  +  +    G  A+ VTY+ L+D Y KS  M  A ++  EM
Sbjct: 916  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                + P IV++++L++G C  G++E+     +  L   + P+  T+  L++ YC     
Sbjct: 976  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNL 1035

Query: 184  TEAMQLYDSMLRNGIMPDG 202
              A  +Y  M   G+ PDG
Sbjct: 1036 KAATAIYKDMCSRGVEPDG 1054



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDA-ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+C+  A A+ +F +  + G+  ++ +YN +I   C L R++EA  L   +      P
Sbjct: 643 LSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP 702

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I+++ +I+ +C+ G +D    +  KM +KG K N  TY  +I    +   +  A + +
Sbjct: 703 DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF 762

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    I P+ + Y+ L+DG CKRG +  A   F+      + PDV+TY  +I G+C+ 
Sbjct: 763 SEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 822

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA +L+  ML  G+ PD +  + L +
Sbjct: 823 GDMVEAGKLFHEMLCRGLEPDIITFTELMN 852



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +L AA  ++  +  RG+EPD  TY  ++ G+C+   + EA  LF+++       +  T++
Sbjct: 1034 NLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYS 1093

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +LI  F K  +  +A  +F +M   G  A+   +    D  +K +   +  D  +E+ EN
Sbjct: 1094 VLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1153


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  A ++FGQ+   G  PD I YNT+I G        EA+++ + +      P 
Sbjct: 235 LLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+++ CK G ++ A  +F  M   G + N V Y+ LI G+ KS  MK A  +++
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++++++++IDGLCK G  E+A  +F   +     P+VVTY  +I+G  K G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R   A ++   M+ +G  PD +    L D
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLD 443



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H   ALK+   +  +   P  +TY  ++   C    L+ A +LF  +     +PN
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPN 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+ +T LI  F K GRM +A  +F +M+E G + +V+T++ +IDG  KS N + A   +E
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN+V+Y+ +I GL K G +  A       + +   PD VTY  L+ G+CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 182 RPTEAMQLYD--------------SMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  EA QL D              S L NG+   G +  TL D   QS  + E
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAE 502



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 2/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++ A  L   L   G  PD +TY  +  G C +  +D AV++ E+ +      + +
Sbjct: 555 RENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L    C +G++D A  +F +M+ +G   +   Y C+I+G  K + ++ A   ++EM
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEM 674

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGR 182
                 P + +Y+ L+  LC  G ++EA + F   L    L+  V+ Y  LI G+CKA +
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALK 734

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A++L++ M+  G +P  +  ++L D  L  SG  E
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFD-GLVRSGKTE 771



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+ E +      +  ++   G+ P+  ++N +I  +    R D+AV  FE +   + KP
Sbjct: 128 LLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP 187

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDV 119
           +  TF IL+D  CK G  + A  +F +M+  G    +   ++ ++    K++ +K A +V
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + +M +    P+ ++Y+ +IDGL K G  +EAL      L    +P  VTY IL+   CK
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           AG    A +L+  M  +G  P+ ++ ++L     +S   +E C
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  LF ++ + G  PD+IT+  +I G C     ++A + FE++     KPN +
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I    K GR+ +A  +   M+  G   + VTY CL+DG+ K   +  A  + +E+
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEAL---YAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + + SPN+  YS L++GLC  G +E+ L   +    A    L P +    I+  G CK 
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV--GLCKT 519

Query: 181 GRPTEAMQLYDSMLRNGIMPDG 202
           GR  EA +++  M+  G  PD 
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDA 541



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+K+  + + RG   D++ Y  +  G C   ++D AV LF+++      P+
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  +I+   K  +++DA   F +M+ KG K  V TY+ L+     + N+  AF  +E
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707

Query: 122 EM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M     +  +++ Y  LI G CK   ++ AL  F   +    +P  VT A L  G  ++
Sbjct: 708 SMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  +A +L   M   G  P     + + D
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 1/201 (0%)

Query: 9   DAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + A ++F ++   G + PD   +  ++       R+ EA ++F ++      P++I +  
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G   +A  +   ML K      VTY  L++   K+  ++ A +++  M  + 
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V Y+ LI G  K G M+EA   F   ++    PDV+T+ ++I G CK+G   +A 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + ++ M+R G  P+ +  +T+
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTI 406



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC--KEGRMDDATMMFSKML 89
           +II G C   RLDEA ++F+++     KP++ T+ ILI+  C  +E R++ A  +   + 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           + G   + VTY+ L  G  K   +  A  + EE      + ++V+Y+ L  GLC +G ++
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            A+  F   +     PD   Y  +I G  K  +  +A + +D M+  G  P
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKP 681



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-LTCVQLKP 60
           LIK   L+ A K F ++  +G +P + TY  ++   C    +DEA   FE  L   +L  
Sbjct: 658 LIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVG 717

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  LI  FCK  ++D A  +F  M+ +G     VT + L DG  +S   + A ++ 
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777

Query: 121 EEMCENNISPNIVSYSILIDGLCK 144
           +EM      P+  +++ ++DGL K
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRK 801



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%)

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           + G + +V TY+CL++     +N    + ++EEM +  I+PN  S++ILI    +    +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +A+  F         PD+ T+ IL+   CKAG   +A +++  M+  G +P    L T
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 6   CH---LDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           CH   +D A   F  +  RG L   ++ Y+ +I G+C   ++D A++LFE +      P 
Sbjct: 694 CHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPT 753

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T   L D   + G+ + A  +  +M   G   +  T++ ++DG  KS        + +
Sbjct: 754 AVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813

Query: 122 E 122
           E
Sbjct: 814 E 814


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  A ++FGQ+   G  PD I YNT+I G        EA+++ + +      P 
Sbjct: 235 LLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+++ CK G ++ A  +F  M   G + N V Y+ LI G+ KS  MK A  +++
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++++++++IDGLCK G  E+A  +F   +     P+VVTY  +I+G  K G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R   A ++   M+ +G  PD +    L D
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLD 443



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H   ALK+   +  +   P  +TY  ++   C    L+ A +LF  +     +PN
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPN 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+ +T LI  F K GRM +A  +F +M+E G + +V+T++ +IDG  KS N + A   +E
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN+V+Y+ +I GL K G +  A       + +   PD VTY  L+ G+CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  EA QL D + +    P+  L S+L    L   GS E+ +
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVK-GLCDGGSVENTL 490



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 2/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++ A  L   L   G  PD +TY  +  G C +  +D AV++ E+ +      + +
Sbjct: 555 RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L    C +G++D A  +F +M+ +G   +   Y C+I+G  K + ++ A   ++EM
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEM 674

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGR 182
                 P + +Y+ L+  LC  G ++EA + F   L    L+  V+ Y  LI G+CKA +
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALK 734

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A++L++ M+  G +P  +  ++L D  L  SG  E
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFD-GLVRSGKTE 771



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+ E +      +  ++   G+ P+  ++N +I  +    R D+AV  FE +   + KP
Sbjct: 128 LLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP 187

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDV 119
           +  TF IL+D  CK G  + A  +F +M+  G    +   ++ ++    K++ +K A +V
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + +M +    P+ ++Y+ +IDGL K G  +EAL      L    +P  VTY IL+   CK
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           AG    A +L+  M  +G  P+ ++ ++L     +S   +E C
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+K+  + + RG   D++ Y  +  G C   ++D AV LF+++      P+
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  +I+   K  +++DA   F +M+ KG K  V TY+ L+     + N+  AF  +E
Sbjct: 648 AAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707

Query: 122 EM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M     +  +++ Y  LI G CK   ++ AL  F   +    +P  VT A L  G  ++
Sbjct: 708 GMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  +A +L   M   G  P     + + D
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 1/201 (0%)

Query: 9   DAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + A ++F ++   G + PD   +  ++       R+ EA ++F ++      P++I +  
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G   +A  +   ML K      VTY  L++   K+  ++ A +++  M  + 
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V Y+ LI G  K G M+EA   F   ++    PDV+T+ ++I G CK+G   +A 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + ++ M+R G  P+ +  +T+
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTI 406



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 7/212 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + + A K F ++   G +P+++TY TII G   + R+  A ++ + +      P+
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF-DVY 120
           S+T+  L+D FCK GR+D+A  +  ++ +     N+  YS L+ G     ++++   D++
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLF 494

Query: 121 EE--MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           E+      N+ P +   SI++ GLCK G ++EA   F   +     PD  TY ILI G C
Sbjct: 495 EQSKAAAENLDPGLCC-SIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552

Query: 179 KA--GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++   R   A  L   +   G +PD +  + L
Sbjct: 553 RSRENRVERAFALLHDLEMVGYLPDAVTYTPL 584



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 38/229 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++   +   G  PD +TY  ++ G+C L RLDEA QL ++L      PN   ++ L+ 
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478

Query: 71  AFC------------------------------------KEGRMDDATMMFSKMLEKGPK 94
             C                                    K GR+D+A  +F +M+ +G K
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 95  ANVVTYSCLIDGYFKSQ--NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            +  TY+ LI+G  +S+   ++ AF +  ++      P+ V+Y+ L  GLCK G ++ A+
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                A       DVV Y  L  G C  G+   A+ L+  M+R G  PD
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-LTCVQLKP 60
           LIK   L+ A K F ++  +G +P + TY  ++   C    +DEA   FE  L   +L  
Sbjct: 658 LIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  LI  FCK  ++D A  +F  M+ +G     VT + L DG  +S   + A ++ 
Sbjct: 718 SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777

Query: 121 EEMCENNISPNIVSYSILIDGLCK 144
           +EM      P+  +++ ++DGL K
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRK 801



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%)

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           + G + +V TY+CL++     +N    + ++EEM +  I+PN  S++ILI    +    +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +A+  F         PD+ T+ IL+   CKAG   +A +++  M+  G +P    L T
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 6   CH---LDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           CH   +D A   F  +  RG L   ++ Y+ +I G+C   ++D A++LFE +      P 
Sbjct: 694 CHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPT 753

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T   L D   + G+ + A  +  +M   G   +  T++ ++DG  KS        + +
Sbjct: 754 AVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813

Query: 122 E 122
           E
Sbjct: 814 E 814


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 114/198 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  K   LD A +LF  +TDRG  PDI TYN +I G C  NR+D+A QL E++T     P
Sbjct: 251 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPP 310

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  ++   CK  ++D+A  ++  +   G   +VVT S LIDG  KS+ +  A  + 
Sbjct: 311 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 370

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM  N  +P++V+Y+ILI G CK   ++++L  F   LD   +P V+TY+I+I   CK+
Sbjct: 371 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS 430

Query: 181 GRPTEAMQLYDSMLRNGI 198
            R  +   L  +ML  G+
Sbjct: 431 ARVRDGCMLLKTMLERGV 448



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +   + + G  P+++TYNT+I G+C L  +DEAV LF ++      P+
Sbjct: 112 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 171

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILID +CK+ R  D   +  +M++ G + N +TY+ L+D   KS     AF++ +
Sbjct: 172 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 231

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +  P+  +++++ID  CK G ++ A   F    D   LPD+ TY I+I G C+A 
Sbjct: 232 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A QL + M   G  PD
Sbjct: 292 RIDDARQLLERMTEAGCPPD 311



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 1/191 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD ITY+T+I G+C      +A +L +++    + P++  +  +I   C  GR+D A + 
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           +  M ++    +V+TY+ L+D   KS  +  A  + E+M E   +PN+V+Y+ LI+G CK
Sbjct: 91  YRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G M+EA+  F+  L+N   PDV TY ILI GYCK  RP +  +L   M++ G  P+ + 
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 205 LSTLADYNLQS 215
            +TL D  ++S
Sbjct: 210 YNTLMDSLVKS 220



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  RG+ P    YNTII G C   R+D A+  +  +      P+ IT+TIL+D
Sbjct: 52  AYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVD 110

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK  R+ DA+++   M+E G   NVVTY+ LI+G+ K  NM  A  ++ +M EN+ SP
Sbjct: 111 ALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 170

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ILIDG CK+   ++        +     P+ +TY  L+    K+G+  +A  L 
Sbjct: 171 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 230

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             MLR    P     + + D
Sbjct: 231 QMMLRRDCKPSHFTFNLMID 250



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 116/222 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  L   +  R  +P   T+N +I  +C + +LD A +LF+ +T     P+
Sbjct: 217 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 276

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   C+  R+DDA  +  +M E G   +VVTY+ ++ G  K+  +  A++VYE
Sbjct: 277 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 336

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +       ++V+ S LIDGLCK   +++A         N   PDVV Y ILI G+CKA 
Sbjct: 337 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 396

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  +++  +  ML  G +P  +  S + D   +S+  ++ C+
Sbjct: 397 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCM 438


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   AL +  ++   GL P +ITY ++I   C    ++ A++  +++    L PN  
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D F ++G M++A  +  +M + G   +VVTY+ LI+G+  +  M+ A  V E+M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +SP++VSYS ++ G C+   ++EAL      ++  + PD +TY+ LI+G+C+  R 
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  LY+ MLR G+ PD    + L +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALIN 528



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 120/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ +++ A ++  ++ D G  P ++TYN +I G+C   ++++A+ + E +    L P+ +
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ ++  FC+   +D+A  +  +M+EKG K + +TYS LI G+ + +  K A D+YEEM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+  +Y+ LI+  C  G +E+AL   +  ++  +LPDVVTY++LI G  K  R 
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L   +     +P  +   TL +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 15/207 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++  ++ ++G++PD ITY+++I G+C   R  EA  L+E++  V L P+  T+T 
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-----YEE 122
           LI+A+C EG ++ A  + ++M+EKG   +VVTYS LI+G  K    + A  +     YEE
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585

Query: 123 MCENNIS--------PNIVSYSI--LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
              ++++         NI   S+  LI G C +G+M EA   F   L  +  PD   Y I
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           +I G+C+AG   +A  LY  M+++G +
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFL 672



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 119/221 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +     +  ++  RG   D +TYNT+I GYC      +A+ +  ++    L P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+T LI + CK G M+ A     +M  +G   N  TY+ L+DG+ +   M  A+ V  
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N  SP++V+Y+ LI+G C  G ME+A+       +  L PDVV+Y+ ++ G+C++ 
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
              EA+++   M+  GI PD +  S+L     +   ++E C
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 119/217 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A++   Q+  RGL P+  TY T++ G+     ++EA ++  ++      P+ +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  C  G+M+DA  +   M EKG   +VV+YS ++ G+ +S ++  A  V  EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+ ++YS LI G C++   +EA   +   L   L PD  TY  LI  YC  G  
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A+QL++ M+  G++PD +  S L +   + S ++E
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCVQLKPNSITFT 66
           +D AL +       G  P +++YN ++       R +  A  +F+++   Q+ PN  T+ 
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI  FC  G +D A  +F KM  KG   NVVTY+ LIDGY K + +   F +   M   
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN++SY+++I+GLC+ G M+E  +            D VTY  LI+GYCK G   +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + ++  MLR+G+ P  +  ++L
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSL 351



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D   KL   +  +GLEP++I+YN +I G C   R+ E   +  ++       + +T+  
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +CKEG    A +M ++ML  G   +V+TY+ LI    K+ NM  A +  ++M    
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  +Y+ L+DG  ++G M EA        DN   P VVTY  LI G+C  G+  +A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            + + M   G+ PD +  ST+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTV 456



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 105/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++ +  + P++ TYN +I G+C    +D A+ LF+K+      PN +T+  LID
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK  ++DD   +   M  KG + N+++Y+ +I+G  +   MK    V  EM     S 
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ LI G CK G   +AL      L + L P V+TY  LI   CKAG    AM+  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G+ P+    +TL D
Sbjct: 369 DQMRVRGLCPNERTYTTLVD 388



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 15/214 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L+ AL+L  ++ ++G+ PD++TY+ +I G    +R  EA +L  KL   +  P+ +T
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592

Query: 65  FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           +  LI+                FC +G M +A  +F  ML K  K +   Y+ +I G+ +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           + +++ A+ +Y+EM ++    + V+   L+  L K G + E        L +  L +   
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
             +L+    + G     + +   M ++G +P+G+
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 58/124 (46%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +  +  +PD   YN +I G+C    + +A  L++++       +++T   L+ 
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  KEG++++   +   +L     +       L++   +  NM    DV  EM ++   P
Sbjct: 684 ALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743

Query: 131 NIVS 134
           N +S
Sbjct: 744 NGIS 747


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  LFG++  RGL P ++++NT+I GYC    LD+  +L   +   ++ P+
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKEG++DDA  +F +M ++G   N VT++ LI+G+  +       ++Y+
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQ 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P++++Y+ LI+GLCK G + EA           L PD  TY +LI G CK G
Sbjct: 355 QMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A+++   M++ GI  D +  + L
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTAL 441



 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 12/216 (5%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  ++++ Q+  +G++PD+ITYNT+I G C +  L EA +L  ++T   LKP+  T+T+L
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CKEG ++ A  +  +M+++G + + V ++ LI G+ +   +  A     EM E  I
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 129 SPNIVSYSILIDGLCKRGLMEEA---LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            P+  +Y+++I G CK+G ++     L    C  D H+ P VVTY +L+ G CK G+   
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC--DGHV-PGVVTYNVLLNGLCKQGQMKN 523

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           A  L D+ML  G++PD +       YN+   G  +H
Sbjct: 524 ANMLLDAMLNLGVVPDDI------TYNILLEGHCKH 553



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KLF ++ DRGL P+ +T+ T+I G+C   R D  +++++++    +KP+
Sbjct: 305 LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPD 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+  CK G + +A  +  +M ++G K +  TY+ LIDG  K  +++SA ++ +
Sbjct: 365 VITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRK 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I  + V+++ LI G C+ G + EA       L+  + PD  TY ++I G+CK G
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  +G +P
Sbjct: 485 DVKTGFKLLKEMQCDGHVP 503



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 35  CGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           CGY       LN    A   +E++      P+   F +L+   CKE ++++A ++F ++ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           ++G +  VV+++ LI+GY KS N+   F +   M EN + P++ +YS+LI+GLCK G ++
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLD 312

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A   F    D  L+P+ VT+  LI G+C  GR    M++Y  MLR G+ PD +  +TL 
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLI 372

Query: 210 D 210
           +
Sbjct: 373 N 373



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   + ++ D G  PD+  +N ++   C  ++++EA  LF ++    L+P  ++F  LI+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK G +D    +   M+E     +V TYS LI+G  K   +  A  ++ EMC+  + P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++ LI+G C  G  +  +  +   L   + PDV+TY  LI G CK G   EA +L 
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M + G+ PD    + L D
Sbjct: 389 IEMTQRGLKPDKFTYTMLID 408



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 83/147 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L++AL++  ++   G+E D + +  +I G+C   ++ EA +   ++    +KP+  
Sbjct: 412 KEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++I  FCK+G +     +  +M   G    VVTY+ L++G  K   MK+A  + + M
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEE 150
               + P+ ++Y+IL++G CK G  E+
Sbjct: 532 LNLGVVPDDITYNILLEGHCKHGNRED 558



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 2/138 (1%)

Query: 74  KEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           ++G+ + A+ +F+ +LE +G   + + +S L++ Y  S     A   +  + ++N+    
Sbjct: 132 RKGK-NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF 190

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            S   L D L K  L   A   +   LD    PDV  + +L+   CK  +  EA  L+  
Sbjct: 191 HSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 193 MLRNGIMPDGLLLSTLAD 210
           + + G+ P  +  +TL +
Sbjct: 251 IGKRGLRPTVVSFNTLIN 268


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A K+F ++   GL PD ++YNT++ GYC      EA+ +F ++T   + P+ +
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI   CK G ++ A  +  +M E+G + N VT++ LIDG+ K   +  A      M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P++V Y+ LI+G C  G M+EA    H      L PDVVTY+ +I  YCK    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L   ML  G++PD +  S+L
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSL 476



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             +   +D A +L G + + GL+P+++T+N+++ G C   ++++A ++F+++    L P+
Sbjct: 235 FFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L+  +CK G   +A  +F++M +KG   +VVT++ LI    K+ N++ A  +  
Sbjct: 295 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVR 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  +  N V+++ LIDG CK+G +++AL A        + P VV Y  LI GYC  G
Sbjct: 355 QMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA +L   M   G+ PD +  ST+
Sbjct: 415 RMDEARELLHEMEAKGLKPDVVTYSTI 441



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 126/220 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K  +L+ A+ L  Q+ +RGL+ + +T+  +I G+C    LD+A+     +   ++KP
Sbjct: 339 VMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  LI+ +C  GRMD+A  +  +M  KG K +VVTYS +I  Y K+ +  SAF++ 
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E  + P+ ++YS LI  LC    + +A   F   +   L PD  TY  LI G+CK 
Sbjct: 459 QQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 518

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           G    A+ L+D M++ G++PD +  S L +   +S+ + E
Sbjct: 519 GNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 558



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + + +  L +A + F  +   G+ P++ TYN ++   C      EA+ +   +      P
Sbjct: 164 LALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGP 223

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+  L+ AF + G +D A  +   M E G K N+VT++ +++G  K+  M+ A  V+
Sbjct: 224 NVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 283

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    ++P+ VSY+ L+ G CK G   EAL  F       ++PDVVT+  LI   CKA
Sbjct: 284 DEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 343

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G    A+ L   M   G+  + +  + L D
Sbjct: 344 GNLERAVTLVRQMRERGLQMNEVTFTALID 373



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 104/186 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL     +    ++P ++ YN +I GYC + R+DEA +L  ++    LKP+ +
Sbjct: 377 KKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 436

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +I A+CK      A  +  +MLEKG   + +TYS LI      + +  A  +++ M
Sbjct: 437 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+  +Y+ LIDG CK G +E AL      +   +LPDVVTY++LI G  K+ R 
Sbjct: 497 IKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 556

Query: 184 TEAMQL 189
            EA QL
Sbjct: 557 MEAQQL 562



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 21/216 (9%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C   +A +L  Q+ ++G+ PD ITY+++I   C   RL +A  LF+ +  + L+P+  
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA----FDV 119
           T+T LID  CKEG ++ A  +  KM++ G   +VVTYS LI+G  KS     A    F +
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566

Query: 120 YEEMCENNISPN--------------IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           Y    E+ I  N              + S   L+ G C +GLM EA   +   LD +   
Sbjct: 567 YH---EDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL 623

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           D   Y++LI G+C+AG   +A+  +  ML+ G  P+
Sbjct: 624 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 15/212 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++++AL L  ++   G+ PD++TY+ +I G     R  EA QL  KL      P + 
Sbjct: 517 KEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANT 576

Query: 64  TFTIL---------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            +  L               +  FC +G M++A  ++  ML++    +   YS LI G+ 
Sbjct: 577 KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHC 636

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           ++ N+  A   +++M +   +PN  S   LI GL + G++ EA       L+   L D  
Sbjct: 637 RAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAE 696

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
               LI      G     + +   M ++G++P
Sbjct: 697 ASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 1/161 (0%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ + +  ++ A   +  +  A   F  ML  G   NV TY+ L+       + K A  +
Sbjct: 154 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M      PN+V+Y+ L+    + G ++ A        +  L P++VT+  ++ G CK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           AG+  +A +++D M+R G+ PDG+  +TL     ++  S E
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHE 313



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 55/124 (44%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K++  + DR    D   Y+ +I G+C    + +A+   +++      PNS +   
Sbjct: 606 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTIS 665

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    + G + +A  +  ++L     A+      LID      N+ +  DV   M ++ 
Sbjct: 666 LIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 725

Query: 128 ISPN 131
           + P+
Sbjct: 726 LLPS 729


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A ++  ++  +G  PD  TY  +I   C   R+D+A  LF+++  V + P+  T+TI
Sbjct: 433 FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A   F +M   G   NVVTY+ L+  Y KS+ +  A D++  M  + 
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA--------------FHCALDNHLLPDVVTYA 171
             PN ++YS LIDGLCK G +++A  +YA              F     + + P+VVTY 
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA + ++A  L D+ML  G  P+ ++   L D
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 1/186 (0%)

Query: 16  GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
           G+ TD  + P+++TY  ++ G C   ++ +A  L + +     +PN I +  L+D FCK 
Sbjct: 598 GKDTDT-ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKV 656

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           G +D A  +F +M + G   +V TY+ LID  FK   +  A  V  +M +++ +PN+V+Y
Sbjct: 657 GEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTY 716

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           + ++DGLCK G  E+AL            P+VVTY  LI G  KAG+    ++L+  M  
Sbjct: 717 TAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKT 776

Query: 196 NGIMPD 201
            G  P+
Sbjct: 777 KGCAPN 782



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 16/220 (7%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF ++   G+ PD+ TY  +I  +C    +++A   F+++      PN +T+T
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-- 124
            L+ A+ K  ++  A  +F +M+      N +TYS LIDG  K+  ++ A +VY ++   
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGT 586

Query: 125 --------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
                          + ISPN+V+Y  L++GLCK   + +A       L     P+ + Y
Sbjct: 587 SDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVY 646

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L+ G+CK G    A +++  M + G +P     ++L D
Sbjct: 647 DALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLID 686



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 97/180 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L   +   G EP+ I Y+ ++ G+C +  +D A ++F ++T     P+
Sbjct: 618 LCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS 677

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID   K+GR+D A  + S+ML+     NVVTY+ ++DG  K+   + A ++  
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLS 737

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +   SPN+V+Y+ LIDGL K G ++  L  F         P+ VTY ILI   C AG
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797



 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 16/224 (7%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ----- 57
           +K   L  A  +F ++      P+ ITY+ +I G C    + +A +++ KL         
Sbjct: 533 LKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIES 592

Query: 58  -----------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
                      + PN +T+  L++  CK  ++ DA  +   ML  G + N + Y  L+DG
Sbjct: 593 DFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDG 652

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           + K   + SA +V+  M +    P++ +Y+ LID + K G ++ A+      L +   P+
Sbjct: 653 FCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPN 712

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           VVTY  ++ G CK G   +A+ L   M + G  P+ +  + L D
Sbjct: 713 VVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALID 756



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL------DEAVQLFEKL---TCVQLKPN 61
           A KLF ++   G  P  + YN  I   C    L      D A +++E++   +CV  K N
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKIN 419

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  F       C  G+ + A  +  +M+ KG   +  TY+ +I    +++ +  AF +++
Sbjct: 420 TANFA---RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQ 476

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++P++ +Y+ILID  CK GL+E+A   F         P+VVTY  L+  Y K+ 
Sbjct: 477 EMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSK 536

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +  +A  ++  M+ +   P+ +  S L D   ++   Q+ C
Sbjct: 537 QLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKAC 577



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 88/157 (56%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C + + ++A Q+ +++      P++ T+T +I   C+  R+D A ++F +M + G   +V
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TY+ LID + K+  ++ A   ++EM     SPN+V+Y+ L+    K   + +A   FH 
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            + +   P+ +TY+ LI G CKAG   +A ++Y  ++
Sbjct: 548 MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI 584



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 36/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K+  LD A+K+  Q+      P+++TY  ++ G C     ++A+ L   +      PN
Sbjct: 688 MFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPN 747

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID---------------- 105
            +T+T LID   K G++D    +F +M  KG   N VTY  LI+                
Sbjct: 748 VVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLD 807

Query: 106 ------------GYFK-----SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                       GY       S+   ++  + EEM  ++ +P    Y +LID   K G +
Sbjct: 808 EMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRL 867

Query: 149 EEALYAFHCALDNHLLPDVVT---YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           E AL      ++     ++ +   +  LI+  C + +  EA+ LY  M R GI+PD
Sbjct: 868 ETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPD 923



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 40/239 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL L   +  +G  P+++TY  +I G     ++D  ++LF ++      PN
Sbjct: 723 LCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPN 782

Query: 62  SITFTILIDAFCKEGRM----------------------DDATMMFSK-------MLEK- 91
            +T+ ILI+  C  G +                            FSK       +LE+ 
Sbjct: 783 YVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEM 842

Query: 92  -----GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS---YSILIDGLC 143
                 P A V  Y  LID + K+  +++A ++++EM E + S N+ S   ++ LI  LC
Sbjct: 843 ESHDTAPIAPV--YGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALC 900

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
               +EEA+  +       ++PD+  +  L++G  +  +  EA+QL   + + G+  +G
Sbjct: 901 LSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWEG 959



 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 51/237 (21%)

Query: 25  PDIITYNTIICG-----------------------------------YCSLNRLDEAVQL 49
           P+++TY T++ G                                   YC+      A +L
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGR--------MDDATMMFSKMLEKG---PKANVV 98
           F ++      P  + + I I + C  GR        +D A  ++ +ML       K N  
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSIC--GREELPNPELLDLAEKVYEEMLVASCVLNKINTA 421

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            ++  + G  K    + AF + +EM      P+  +Y+ +I  LC+   +++A   F   
Sbjct: 422 NFARCLCGVGK---FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEM 478

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
               + PDV TY ILI  +CKAG   +A   +D M   G  P+ +  + L    L+S
Sbjct: 479 KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKS 535



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 7/204 (3%)

Query: 1   MLIKECHLDA----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +L++ C L      AL+  G+L D G  P  +TYN ++    S  +++ A ++ ++++  
Sbjct: 174 VLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSAS 233

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
               +  T      A CKEGR  DA  +  +   +  K + V  + +I G  ++     A
Sbjct: 234 GFCMDRSTVGSFAQALCKEGRWGDALDLLER---EDFKLDTVLCTQMISGLMEASLFNEA 290

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
                 M  N+  PN+V+Y  L+ G  K+  +       +  +     P    +  L+  
Sbjct: 291 MSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHT 350

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           YC A     A +L++ M   G  P
Sbjct: 351 YCNAEDYAYAYKLFNRMNTCGCPP 374



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 9/207 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     AL L   L     + D +    +I G    +  +EA+    ++ C    PN
Sbjct: 249 LCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPN 305

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+  F K+ ++     + + M+ +G   +   ++ L+  Y  +++   A+ ++ 
Sbjct: 306 VVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFN 365

Query: 122 EMCENNISPNIVSYSILIDGLCKR------GLMEEALYAFHCALDNHLLPDVVTYAILIR 175
            M      P  V Y+I I  +C R       L++ A   +   L    + + +  A   R
Sbjct: 366 RMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFAR 425

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDG 202
             C  G+  +A Q+   M+R G +PD 
Sbjct: 426 CLCGVGKFEKAFQIVKEMMRKGFVPDA 452


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 118/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+ L  ++  +G   D++TYNTI+ G C    L EA +LF ++T   L P+S T TI
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G + +A  +F KM EK  + +VVTY+ L+DG+ K  ++ +A +++ +M    
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P  +SYSIL++ LC +G + EA   +   +  ++ P V+    +I+GYC++G  ++  
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
              + M+  G +PD +  +TL
Sbjct: 606 SFLEKMISEGFVPDCISYNTL 626



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++       Q+ ++G+ PDI+TYNT+I  Y S   ++EA +L   +      P 
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK G+ + A  +F++ML  G   +  TY  L+    K  ++     V+ 
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++ P++V +S ++    + G +++AL  F+   +  L+PD V Y ILI+GYC+ G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + AM L + ML+ G   D +  +T+
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTI 451



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 107/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A ++F ++   GL PD  TY +++   C    + E  ++F  +    + P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++  F + G +D A M F+ + E G   + V Y+ LI GY +   +  A ++  
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +   + ++V+Y+ ++ GLCKR ++ EA   F+   +  L PD  T  ILI G+CK G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               AM+L+  M    I  D +  +TL D
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLD 523



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 104/196 (53%), Gaps = 2/196 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +++  +  + + P  I+Y+ ++   CS   L EA ++++++    +KP  +    
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C+ G   D      KM+ +G   + ++Y+ LI G+ + +NM  AF + ++M E  
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650

Query: 128 --ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P++ +Y+ ++ G C++  M+EA       ++  + PD  TY  +I G+      TE
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710

Query: 186 AMQLYDSMLRNGIMPD 201
           A +++D ML+ G  PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 110/198 (55%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F  +  R + PD++ +++++  +     LD+A+  F  +    L P+++ +TILI  +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C++G +  A  + ++ML++G   +VVTY+ ++ G  K + +  A  ++ EM E  + P+ 
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            + +ILIDG CK G ++ A+  F    +  +  DVVTY  L+ G+ K G    A +++  
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M+   I+P  +  S L +
Sbjct: 541 MVSKEILPTPISYSILVN 558



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 111/208 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +  +LD AL  F  + + GL PD + Y  +I GYC    +  A+ L  ++       
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  ++   CK   + +A  +F++M E+    +  T + LIDG+ K  N+++A +++
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E  I  ++V+Y+ L+DG  K G ++ A   +   +   +LP  ++Y+IL+   C  
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA +++D M+   I P  ++ +++
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSM 591



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +L   +  +G  P + TYNT+I G C   + + A ++F ++    L P+S T+  
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CK+G + +   +FS M  +    ++V +S ++  + +S N+  A   +  + E  
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y+ILI G C++G++  A+   +  L      DVVTY  ++ G CK     EA 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L++ M    + PD   L+ L D
Sbjct: 466 KLFNEMTERALFPDSYTLTILID 488



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KLF ++T+R L PD  T   +I G+C L  L  A++LF+K+   +++ +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D F K G +D A  +++ M+ K      ++YS L++      ++  AF V++
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   NI P ++  + +I G C+ G   +        +    +PD ++Y  LI G+ +  
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634

Query: 182 RPTEAMQLYDSM--LRNGIMPD 201
             ++A  L   M   + G++PD
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPD 656



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 102/206 (49%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   L  A + F  L  +G    I   N +I     +  ++ A  ++++++   +  N 
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+++A CK+G+M+      S++ EKG   ++VTY+ LI  Y     M+ AF++   
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     SP + +Y+ +I+GLCK G  E A   F   L + L PD  TY  L+   CK G 
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             E  +++  M    ++PD +  S++
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSM 381



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 69/140 (49%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   F +LI  + +  ++ +A   F+ +  KG   ++   + LI    +   ++ A+ VY
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +E+  + +  N+ + +I+++ LCK G ME+         +  + PD+VTY  LI  Y   
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G   EA +L ++M   G  P
Sbjct: 284 GLMEEAFELMNAMPGKGFSP 303


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 109/186 (58%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TY T+I G   + RL EAV LF ++    +KP+  TF IL+D  CKEG M  A  +
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + M+++G  +N+VTY+ L+DGYF  +    A  V+  M    ++P++ SYSI+I+GLCK
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
             +++EA+  F       + P+ VTY  LI G  K GR ++A  L + M   G   D + 
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416

Query: 205 LSTLAD 210
            S+L D
Sbjct: 417 YSSLLD 422



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 113/201 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +F  +  RG+ PD+ +Y+ +I G C    +DEAV LF+++    + PN++T+  L
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID   K GR+ DA  + ++M  +G  A+V+TYS L+D   K+  +  A  +  ++ +  I
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PNI +Y+IL+DGLCK G +++A   +   L      DV  Y +++ G CK G   EA+ 
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505

Query: 189 LYDSMLRNGIMPDGLLLSTLA 209
           L   M  NG +PD +   TL 
Sbjct: 506 LVSKMEDNGCIPDAVTYETLV 526



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 107/196 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  +G++ +I+TYN+++ GY  + + ++A  +F  +    + P+
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 343

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +++I+I+  CK   +D+A  +F +M  K    N VTY+ LIDG  K   +  A+D+  
Sbjct: 344 VQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVN 403

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       ++++YS L+D LCK   +++A+       D  + P++ TY IL+ G CK G
Sbjct: 404 EMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNG 463

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A  +Y  +L  G
Sbjct: 464 RLKDAQAVYQDLLIKG 479



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A+    Q+  + ++PD+ T+N +I  +C L  L+ A  +  K+  +   P+
Sbjct: 74  LVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPD 133

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T T LI   C  G++ +A      ++ KG   + V+Y  LI+G  K+   ++A  V  
Sbjct: 134 TVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLR 193

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++    + PN+V Y+ +ID LCK  L+  A       +   + PDVVTY  LI G    G
Sbjct: 194 KIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVG 253

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA+ L++ ML   I PD    + L D
Sbjct: 254 RLKEAVGLFNQMLLKNIKPDVYTFNILVD 282



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL     +  +G   D ++Y T+I G C       A+Q+  K+  + ++PN + +  +ID
Sbjct: 153 ALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIID 212

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+  +  A+ + S+M+ K    +VVTY+ LI G      +K A  ++ +M   NI P
Sbjct: 213 SLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKP 272

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +++IL+DGLCK G M++A       +   +  ++VTY  L+ GY    +  +A  ++
Sbjct: 273 DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVF 332

Query: 191 DSMLRNGIMPD 201
           ++M R G+ PD
Sbjct: 333 NTMARRGVTPD 343


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 106/188 (56%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G+ PD+ITY +II GYC L  +  A +LF+++    +KPN  TF +LID F K G M  
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A +M+ KML  G   +VVT++ LIDGY +   +     ++EEM   N+SPN+ +Y++LI+
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK   + EA         + ++P    Y  +I G+CKAG+  EA  +   M      P
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458

Query: 201 DGLLLSTL 208
           D +  + L
Sbjct: 459 DKITFTIL 466



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 1/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITF 65
            +D A + F  + + G  PDI++YNT+I G+C +N + +   L ++   ++ + P+ IT+
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I  +CK G M  A+ +F +M+  G K N  T++ LIDG+ K  NM+SA  +YE+M  
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P++V+++ LIDG C+ G + + L  +      +L P+V TYA+LI   CK  R  E
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A      +  + ++P   + + + D
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVID 433



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 115/202 (56%), Gaps = 1/202 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML+K+  +D A+ LF +  +    PD+ ++N +I G C +  +D+A + F+ +      P
Sbjct: 188 MLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFP 247

Query: 61  NSITFTILIDAFCKEGRMDDA-TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           + +++  LI+ FC+   +     ++   ML KG   +V+TY+ +I GY K  +MK+A ++
Sbjct: 248 DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASEL 307

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM  + I PN  ++++LIDG  K G M  A+  +   L    LPDVVT+  LI GYC+
Sbjct: 308 FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCR 367

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G   + ++L++ M    + P+
Sbjct: 368 EGEVNQGLKLWEEMKVRNLSPN 389



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 109/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA +LF ++   G++P+  T+N +I G+  +  +  A+ ++EK+  +   P+ +TFT 
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +C+EG ++    ++ +M  +    NV TY+ LI+   K   ++ A +    +  + 
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P    Y+ +IDG CK G ++EA +      +    PD +T+ ILI G C  GR  EA+
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             +  M+    +PD + +++L
Sbjct: 481 STFYKMIEINCVPDEITINSL 501



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 106/192 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++ +A+ ++ ++   G  PD++T+ ++I GYC    +++ ++L+E++    L PN  
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI+A CKE R+ +A      +           Y+ +IDG+ K+  +  A  +  EM
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEM 451

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P+ ++++ILI G C +G M EA+  F+  ++ + +PD +T   LI    KAG P
Sbjct: 452 QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511

Query: 184 TEAMQLYDSMLR 195
            EA Q+  + L+
Sbjct: 512 NEASQIKQAALQ 523



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A     ++   G++     YN ++      N +DEAV LF +       P+  +F I
Sbjct: 160 LDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNI 219

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY-EEMCEN 126
           LI   C+ G +D A   F  M   G   ++V+Y+ LI+G+ +   +    D+  E+M   
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++++Y+ +I G CK G M+ A   F   + + + P+  T+ +LI G+ K G    A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M +Y+ ML  G +PD +  ++L D
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLID 363



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D+A  +F  +   G+ PD      ++  Y  + +LD A     ++ C  +K +   +  L
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNL 185

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++   K+  +D+A ++F + LE     +V +++ LI G  +   +  AF+ ++ M     
Sbjct: 186 LNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGC 245

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-----PDVVTYAILIRGYCKAGRP 183
            P+IVSY+ LI+G C+   + +     H  L   +L     PDV+TY  +I GYCK G  
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKG----HDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM 301

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L+D M+ +GI P+    + L D
Sbjct: 302 KAASELFDEMVSSGIKPNDFTFNVLID 328



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A      L    + P    YN +I G+C   ++DEA  +  ++   + +P+
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
            ITFTILI   C +GRM +A   F KM+E     + +T + LI    K+
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  +  ++ ++   PD IT+  +I G C   R+ EA+  F K+  +   P+ I
Sbjct: 437 KAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEI 496

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK 91
           T   LI    K G  ++A+ +    L+K
Sbjct: 497 TINSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 36.6 bits (83), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y +L+  LCK GL + A   F C   + +LPD     +L+  Y + G+   A    + +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 194 LRNGI 198
              GI
Sbjct: 171 HCYGI 175


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 106/188 (56%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G+ PD+ITY +II GYC L  +  A +LF+++    +KPN  TF +LID F K G M  
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A +M+ KML  G   +VVT++ LIDGY +   +     ++EEM   N+SPN+ +Y++LI+
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LCK   + EA         + ++P    Y  +I G+CKAG+  EA  +   M      P
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458

Query: 201 DGLLLSTL 208
           D +  + L
Sbjct: 459 DKITFTIL 466



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 1/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITF 65
            +D A + F  + + G  PDI++YNT+I G+C +N + +   L ++   ++ + P+ IT+
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I  +CK G M  A+ +F +M+  G K N  T++ LIDG+ K  NM+SA  +YE+M  
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P++V+++ LIDG C+ G + + L  +      +L P+V TYA+LI   CK  R  E
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A      +  + ++P   + + + D
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVID 433



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 115/202 (56%), Gaps = 1/202 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML+K+  +D A+ LF +  +    PD+ ++N +I G C +  +D+A + F+ +      P
Sbjct: 188 MLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFP 247

Query: 61  NSITFTILIDAFCKEGRMDDA-TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           + +++  LI+ FC+   +     ++   ML KG   +V+TY+ +I GY K  +MK+A ++
Sbjct: 248 DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASEL 307

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM  + I PN  ++++LIDG  K G M  A+  +   L    LPDVVT+  LI GYC+
Sbjct: 308 FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCR 367

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G   + ++L++ M    + P+
Sbjct: 368 EGEVNQGLKLWEEMKVRNLSPN 389



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 109/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA +LF ++   G++P+  T+N +I G+  +  +  A+ ++EK+  +   P+ +TFT 
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +C+EG ++    ++ +M  +    NV TY+ LI+   K   ++ A +    +  + 
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P    Y+ +IDG CK G ++EA +      +    PD +T+ ILI G C  GR  EA+
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             +  M+    +PD + +++L
Sbjct: 481 STFYKMIEINCVPDEITINSL 501



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 106/192 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++ +A+ ++ ++   G  PD++T+ ++I GYC    +++ ++L+E++    L PN  
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI+A CKE R+ +A      +           Y+ +IDG+ K+  +  A  +  EM
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEM 451

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P+ ++++ILI G C +G M EA+  F+  ++ + +PD +T   LI    KAG P
Sbjct: 452 QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511

Query: 184 TEAMQLYDSMLR 195
            EA Q+  + L+
Sbjct: 512 NEASQIKQAALQ 523



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A     ++   G++     YN ++      N +DEAV LF +       P+  +F I
Sbjct: 160 LDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNI 219

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY-EEMCEN 126
           LI   C+ G +D A   F  M   G   ++V+Y+ LI+G+ +   +    D+  E+M   
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK 279

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++++Y+ +I G CK G M+ A   F   + + + P+  T+ +LI G+ K G    A
Sbjct: 280 GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA 339

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M +Y+ ML  G +PD +  ++L D
Sbjct: 340 MVMYEKMLLLGCLPDVVTFTSLID 363



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D+A  +F  +   G+ PD      ++  Y  + +LD A     ++ C  +K +   +  L
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNL 185

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++   K+  +D+A ++F + LE     +V +++ LI G  +   +  AF+ ++ M     
Sbjct: 186 LNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGC 245

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-----PDVVTYAILIRGYCKAGRP 183
            P+IVSY+ LI+G C+   + +     H  L   +L     PDV+TY  +I GYCK G  
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKG----HDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM 301

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L+D M+ +GI P+    + L D
Sbjct: 302 KAASELFDEMVSSGIKPNDFTFNVLID 328



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A      L    + P    YN +I G+C   ++DEA  +  ++   + +P+
Sbjct: 400 LCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
            ITFTILI   C +GRM +A   F KM+E     + +T + LI    K+
Sbjct: 460 KITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 508



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  +  ++ ++   PD IT+  +I G C   R+ EA+  F K+  +   P+ I
Sbjct: 437 KAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEI 496

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK 91
           T   LI    K G  ++A+ +    L+K
Sbjct: 497 TINSLISCLLKAGMPNEASQIKQAALQK 524



 Score = 36.6 bits (83), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y +L+  LCK GL + A   F C   + +LPD     +L+  Y + G+   A    + +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 194 LRNGI 198
              GI
Sbjct: 171 HCYGI 175


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 122/205 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT+I GY  L  LDE  +L   +     +P+  
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ILI+  CKEG++D+A  +F++ML+ G   N VT++ LI G+ K++ +  A ++Y++M
Sbjct: 208 TYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +SP++++Y+ LI GLCK+G +++        + N L PD ++Y  LI G CK G  
Sbjct: 268 LSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A++L + M++  I  D +  + L
Sbjct: 328 EIALELRNKMIQESIRLDDVAYTAL 352



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 110/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G +PD+ TY+ +I G C   +LDEA +LF ++    L PN 
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LI   CK  ++D A  ++ +ML +G   +++TY+ LI G  K   +K   D+ +E
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N + P+ +SY+ LIDG CK G +E AL   +  +   +  D V Y  LI   C+ GR
Sbjct: 302 MIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
            ++A ++   ML  G+ PD
Sbjct: 362 ASDAEKMLREMLSVGLKPD 380



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 110/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A +LF ++ D GL P+ +T+ T+I G+C   ++D A+++++++    L P+
Sbjct: 216 LCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +     +  +M+  G K + ++Y+ LIDG  K  +++ A ++  
Sbjct: 276 LITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRN 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +I  + V+Y+ LI  LC+ G   +A       L   L PD  TY ++I  +CK  
Sbjct: 336 KMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKR 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A +L   M R+G +P
Sbjct: 396 DSKTASKLLREMQRDGPLP 414



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  LI+ + 
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D+   + S M   G + +V TYS LI+G  K   +  A +++ EM +N + PN V
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LI G CK   ++ A+  +   L   L PD++TY  LI G CK G   +   L D M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302

Query: 194 LRNGIMPDGLLLSTLAD 210
           + NG+ PD +  +TL D
Sbjct: 303 IMNGLKPDKISYTTLID 319



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L     L  ++   GL+PD I+Y T+I G C    L+ A++L  K+    ++ +
Sbjct: 286 LCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K ++ K+A  +  
Sbjct: 346 DVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLR 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMQRDGPLPGVVT 418



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 41/221 (18%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           +I   ++I    S    D A  +FE +  T    + +   F+ L+ A+ + G + DA   
Sbjct: 29  LIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMIAYLESGFVRDAVQC 88

Query: 85  FSKMLEKGPKANVVTYSC--LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           F   L K  K  V   +C  +++   + +  K  +D Y+E+ E     ++  ++IL+   
Sbjct: 89  FR--LTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRF 146

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY------------------------- 177
           CK G M  A   F       L P VV++  LI GY                         
Sbjct: 147 CKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDV 206

Query: 178 ----------CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                     CK G+  EA +L++ ML NG++P+G+  +TL
Sbjct: 207 YTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTL 247


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 120/200 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++T +G+  D++TY+T+I G+C + +L EA+ L  ++    + P+  T+TIL+D
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  KEG++ +A  + + ML+   K +V TY+ L++GY     +K A  V+  M    ++P
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ILI+G CK  +++EAL  F      +++PD VTY+ L+ G CK+GR +    L 
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G   D +  ++L D
Sbjct: 646 DEMRDRGQPADVITYNSLID 665



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 114/197 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A  +F  ++  G+ PD+ TY  +I G+C    +DEA+ LF+++    + P+++T++
Sbjct: 567 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYS 626

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK GR+     +  +M ++G  A+V+TY+ LIDG  K+ ++  A  ++ +M + 
Sbjct: 627 SLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQ 686

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN  +++IL+DGLCK G +++A   F   L      DV  Y ++I G+CK G   EA
Sbjct: 687 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEA 746

Query: 187 MQLYDSMLRNGIMPDGL 203
           + +   M  NG +P+ +
Sbjct: 747 LTMLSKMEENGCIPNAV 763



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 113/194 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +    ++PD+ TYNT++ GY  +  + +A  +F  ++ + + P+  
Sbjct: 529 KEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVH 588

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+ FCK   +D+A  +F +M +K    + VTYS L+DG  KS  +   +D+ +EM
Sbjct: 589 TYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM 648

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +     ++++Y+ LIDGLCK G +++A+  F+   D  + P+  T+ IL+ G CK GR 
Sbjct: 649 RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 708

Query: 184 TEAMQLYDSMLRNG 197
            +A +++  +L  G
Sbjct: 709 KDAQEVFQDLLTKG 722



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 116/200 (58%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++T +G+  +++TY+T+I G+C + +L EA+ L   +    + PN  T+ IL+D
Sbjct: 152 AYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVD 211

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG++ +A  + + ML+   K+NV+TYS L+DGYF    +K A  V+  M    ++P
Sbjct: 212 ALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 271

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ SY+I+I+G CK   +++AL  F   + +   P ++ +  ++  + K    + A+ L 
Sbjct: 272 DVHSYNIMINGFCKIKRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLS 330

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             +   GI PD   L+ L +
Sbjct: 331 HRLELKGIQPDLFTLNILIN 350



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 35/239 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L  +G + + ++Y T+I G C +     A++L  K+     KPN   ++
Sbjct: 392 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 451

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  A+VVTYS LI G+     +K A  +  EM   
Sbjct: 452 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511

Query: 127 NISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL------- 164
            I+P++ +Y+IL+D L K G ++EA               ++ ++  ++ +LL       
Sbjct: 512 TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKA 571

Query: 165 -------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                        PDV TY ILI G+CK+    EA+ L+  M +  ++PD +  S+L D
Sbjct: 572 QHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 107/196 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL LF ++  + + PD +TY++++ G C   R+     L +++       + I
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID  CK G +D A  +F+KM ++G + N  T++ L+DG  K   +K A +V++++
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                  ++  Y+++I G CK+GL+EEAL       +N  +P+ VT+ I+I    K    
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEN 778

Query: 184 TEAMQLYDSMLRNGIM 199
            +A +L   M+  G++
Sbjct: 779 DKAEKLLRQMIARGLL 794



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL    +L  +G + + ++Y T+I G C +     A++   K+     KPN   + 
Sbjct: 78  QVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYN 137

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +IDA CK   + +A  +FS+M  KG  ANVVTYS LI G+     +K A  +   M   
Sbjct: 138 TIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLK 197

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+ +Y+IL+D LCK G ++EA       L   +  +V+TY+ L+ GY       +A
Sbjct: 198 TINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKA 257

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             ++++M   G+ PD      +  YN+  +G
Sbjct: 258 QHVFNAMSLMGVTPD------VHSYNIMING 282



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 103/201 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            +L +  ++  RG  PD +T NT+I G C   ++ EA+   +KL     + N +++  LI
Sbjct: 46  VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +  C+ G    A     K+  +  K NV  Y+ +ID   K Q +  A+ ++ EM    IS
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N+V+YS LI G C  G ++EAL   +  +   + P+V TY IL+   CK G+  EA  +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              ML+  +  + +  STL D
Sbjct: 226 LAVMLKACVKSNVITYSTLMD 246



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 103/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L  +L  +G++PD+ T N +I  +C + ++     +  K+      P+++T  
Sbjct: 322 HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLN 381

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C +G++  A     K+L +G + N V+Y+ LI+G  K  + + A  +  ++   
Sbjct: 382 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 441

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+  YS +ID LCK  L+ EA   F       +  DVVTY+ LI G+C  G+  EA
Sbjct: 442 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L + M+   I PD    + L D
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVD 525



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH+        +  ++  RG  P  +T NT+I G C   ++ +A+   +KL     + N 
Sbjct: 353 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 412

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  LI+  CK G    A  +  K+  +  K NV  YS +ID   K Q +  A+ ++ E
Sbjct: 413 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    IS ++V+YS LI G C  G ++EA+   +  +   + PDV TY IL+    K G+
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGK 532

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  +   ML+  + PD    +TL +
Sbjct: 533 VKEAKSVLAVMLKACVKPDVFTYNTLMN 560



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 83/144 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +     L  ++ DRG   D+ITYN++I G C    LD+A+ LF K+    ++PN
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TFTIL+D  CK GR+ DA  +F  +L KG   +V  Y+ +I G+ K   ++ A  +  
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M EN   PN V++ I+I+ L K+
Sbjct: 752 KMEENGCIPNAVTFDIIINALFKK 775



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 101/191 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA+K   ++  R  +P++  YNTII   C    + EA  LF ++T   +  N +T++ LI
Sbjct: 116 AAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLI 175

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G++ +A  + + M+ K    NV TY+ L+D   K   +K A  V   M +  + 
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N+++YS L+DG      +++A + F+      + PDV +Y I+I G+CK  R  +A+ L
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295

Query: 190 YDSMLRNGIMP 200
           +  M+ +   P
Sbjct: 296 FKEMILSRFPP 306



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A  +F  ++  G+ PD+ +YN +I G+C + R+D+A+ LF+++   +  P  I F 
Sbjct: 253 EVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFN 311

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++D+F K      A  +  ++  KG + ++ T + LI+ +     +   F V  ++ + 
Sbjct: 312 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR 371

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+ + LI GLC +G +++AL+     L      + V+YA LI G CK G    A
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L   +      P+  + ST+ D
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIID 455



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 105/210 (50%), Gaps = 3/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +    ++ ++ITY+T++ GY  +  + +A  +F  ++ + + P+
Sbjct: 213 LCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 272

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             ++ I+I+ FCK  R+D A  +F +M L + P   ++ ++ ++D + K ++  +A  + 
Sbjct: 273 VHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP--IIQFNKILDSFAKMKHYSTAVSLS 330

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             +    I P++ + +ILI+  C  G +          L     P  VT   LI+G C  
Sbjct: 331 HRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLK 390

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  +A+  +D +L  G   + +  +TL +
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLIN 420



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 1/201 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   +  + + P++ TYN ++   C   ++ EA  +   +    +K N IT++ 
Sbjct: 184 LKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYST 243

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D +     +  A  +F+ M   G   +V +Y+ +I+G+ K + +  A ++++EM  + 
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR 303

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P I+ ++ ++D   K      A+   H      + PD+ T  ILI  +C  G+ T   
Sbjct: 304 FPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGF 362

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   +L+ G  P  + L+TL
Sbjct: 363 SVLAKILKRGYPPSTVTLNTL 383



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ LF ++ D+G+ P+  T+  ++ G C   RL +A ++F+ L       +
Sbjct: 667 LCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD 726

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ++I   CK+G +++A  M SKM E G   N VT+  +I+  FK      A  +  
Sbjct: 727 VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLR 786

Query: 122 EM 123
           +M
Sbjct: 787 QM 788



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F  L  +G   D+  YN +I G+C    L+EA+ +  K+      PN
Sbjct: 702 LCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPN 761

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++TF I+I+A  K+   D A  +  +M+ +G
Sbjct: 762 AVTFDIIINALFKKDENDKAEKLLRQMIARG 792


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A ++  ++ DRG+ PD +T+N+I+ G C   + + A  L   +     +P+
Sbjct: 20  LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   CK+  +D A  +  + +  G   +VVTYS L DG  K   +  AF++ +
Sbjct: 80  CCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N  +PN+V+Y+ LIDGLCK    E+A       + +  +PDVVTY I++ G CK G
Sbjct: 140 EMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEG 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A+++ + ML+ G  P  +  + L
Sbjct: 200 RLDKALKMVEGMLKRGCTPSVITYTAL 226



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 115/219 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  L   + +R   P   TYNT+I G C    +D A  L ++       P+
Sbjct: 55  LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPD 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++IL D  CK GR+D+A  +  +M   G   N+VTY+ LIDG  K+   + A+++ E
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  +   P++V+Y+I++DGLCK G +++AL      L     P V+TY  L+ G C+ G
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  EA  ++  M+      D L   +L +   +SS ++E
Sbjct: 235 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKE 273



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 112/193 (58%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + +R + PD+ TYN +I G C  ++ D+A ++  ++    + P+++TF  ++D  CK G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            + A  + + M E+  + +  TY+ LI G  K QN+  A  + +E   +   P++V+YSI
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L DGLCKRG ++EA         N   P++VTY  LI G CKA +  +A +L ++++ +G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 198 IMPDGLLLSTLAD 210
            +PD +  + + D
Sbjct: 181 FVPDVVTYTIIVD 193



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 32/251 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L  +++  G  P+++TYNT+I G C  ++ ++A +L E L      P+
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI++D  CKEGR+D A  M   ML++G   +V+TY+ L++G  ++  +  A  +++
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244

Query: 122 EMCENNIS--------------------------------PNIVSYSILIDGLCKRGLME 149
           EM   + +                                P I  Y+ L+DG CK G ++
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD 304

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           E    F        +P++ TY I++ G CK G+  EA    +SM   G +PD +  + + 
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364

Query: 210 DYNLQSSGSQE 220
           D   ++S  +E
Sbjct: 365 DGLFKASKPKE 375



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 105/192 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++D A  L  +    G  PD++TY+ +  G C   R+DEA +L ++++     PN
Sbjct: 90  LCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPN 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK  + + A  +   ++  G   +VVTY+ ++DG  K   +  A  + E
Sbjct: 150 LVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +   +P++++Y+ L++GLC+ G ++EA + F   +      D + Y  L+ GYCK+ 
Sbjct: 210 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 269

Query: 182 RPTEAMQLYDSM 193
           R  EA ++ D +
Sbjct: 270 RTKEAQKVVDGI 281



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 32/239 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------ 55
           L KE  LD ALK+   +  RG  P +ITY  ++ G C   R+DEA  +F+++        
Sbjct: 195 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 254

Query: 56  --------------------------VQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
                                     ++  P    +  L+D +CKEGR+D+   +F  M 
Sbjct: 255 ALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA 314

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +G   N+ TY+ ++DG  K   +  AF   E M      P++VSY+I+IDGL K    +
Sbjct: 315 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 374

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EA       +   + PD VTY  L+  +CK  R  +A+ +  +M++ G+ PD +  +TL
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 433



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A      +   G  PD+++YN II G    ++  EA Q+ +++    + P+
Sbjct: 332 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+  FCKE R DDA  +   M++ G   + VTY+ LI G  ++  +  A+++  
Sbjct: 392 AVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMH 451

Query: 122 EMCENN-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM  N  +     +Y+ +ID LCK G +++AL        + +  + VTY I I   CK 
Sbjct: 452 EMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 511

Query: 181 GRPTEAMQLYDSM 193
           GR  EA  L   M
Sbjct: 512 GRLDEASSLLSEM 524



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 92/164 (56%)

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++ P+  T+ ILID  CK  + D A+ M  +M+++G   + VT++ ++DG  K+   + A
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +   M E N  P+  +Y+ LI GLCK+  ++ A       + +  +PDVVTY+IL  G
Sbjct: 65  HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            CK GR  EA +L   M  NG  P+ +  +TL D   ++S +++
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEK 168



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 4/193 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  AL L   +T  G+E + +TYN  I   C   RLDEA  L  ++  ++   +
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---D 529

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +++T +I   CK  ++D A+ +  +M+  KG      T++ LID + K++ +  A  + 
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M +   SP++++Y+++I  LCK   +++A   F       ++   V+Y +LI G C  
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 649

Query: 181 GRPTEAMQLYDSM 193
           GR  EA+Q+ + M
Sbjct: 650 GRGKEALQVLEEM 662



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 40/242 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL---TCV---- 56
           KE   D A+ +   +   G++PD +TYNT+I G    NRL +A +L  ++    CV    
Sbjct: 404 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 463

Query: 57  -----------------------------QLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                                         ++ N++T+ I ID  CKEGR+D+A+ + S+
Sbjct: 464 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 523

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNISPNIVSYSILIDGLCKRG 146
           M       + V+Y+ +I G  K++ +  A  +  EM     +     ++++LID   K  
Sbjct: 524 M---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 580

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++EAL      +     P V+TY ++I   CK  +  +A +L+D M   GI+   +  +
Sbjct: 581 RLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 640

Query: 207 TL 208
            L
Sbjct: 641 VL 642



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 1/151 (0%)

Query: 2   LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   LD A KL  ++   +GL     T+N +I  +    RLDEA+ L E +      P
Sbjct: 540 LCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSP 599

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+ ++I   CK  ++D A  +F +M  +G  A+ V+Y+ LI G       K A  V 
Sbjct: 600 SVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 659

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EEM  ++   + +    L   L  +G  EEA
Sbjct: 660 EEMASSDCEIDDLKCRKLYLALRGQGRGEEA 690



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 42/84 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +LF ++  RG+    ++Y  +I G C   R  EA+Q+ E++     + + +    
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676

Query: 68  LIDAFCKEGRMDDATMMFSKMLEK 91
           L  A   +GR ++A  +  +M  K
Sbjct: 677 LYLALRGQGRGEEAAELLRRMTTK 700


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 118/202 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+ +  Q+ + G++PD++ Y TII   C    +D A+ LF ++    ++P+ + +T
Sbjct: 156 RIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYT 215

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C  GR  DA ++   M+++  K +V+T++ LID + K   +  A ++Y EM + 
Sbjct: 216 SLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQM 275

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +I+PNI +Y+ LI+GLC  G ++EA   F+        PDVV Y  LI G+CK  +  +A
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDA 335

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M+++  M + G+  + +  +TL
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTL 357



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D AL LF Q+ + G+ PD++ Y +++ G C+  R  +A  L   +   ++KP+
Sbjct: 186 LCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD 245

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LIDAF KEG++ DA  ++++M++     N+ TY+ LI+G      +  A  ++ 
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ LI+G CK   +E+A+  F+      L  + +TY  LI+G+   G
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVG 365

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P  A +++  M+  G+ P+
Sbjct: 366 KPNVAQEVFGHMVSRGVPPN 385



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 3/195 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A +L+ ++    + P+I TY ++I G C   RLDEA Q+F  +      P+
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI+ FCK  +++DA  +F +M +KG   N +TY+ LI G+        A +V+ 
Sbjct: 316 VVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFG 375

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL---LPDVVTYAILIRGYC 178
            M    + PNI +Y++L+  LC  G + +AL  F       +    P++ TY +L+ G C
Sbjct: 376 HMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLC 435

Query: 179 KAGRPTEAMQLYDSM 193
             G+  +A+ ++  M
Sbjct: 436 YNGKLEKALMVFGDM 450



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 110/196 (56%), Gaps = 4/196 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA L L G +  R ++PD+IT+N +I  +    +L +A +L+ ++  + + PN  T+T L
Sbjct: 229 DADLLLRGMM-KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C EGR+D+A  MF  M  KG   +VV Y+ LI+G+ K + ++ A  ++ EM +  +
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL 347

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           + N ++Y+ LI G    G    A   F   +   + P++ TY +L+   C  G+  +A+ 
Sbjct: 348 TGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALM 407

Query: 189 LYDSMLR---NGIMPD 201
           +++ M +   +G+ P+
Sbjct: 408 IFEDMQKREIDGVPPN 423



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD A ++F  +  +G  PD++ Y ++I G+C   ++++A+++F +++   L  N+IT
Sbjct: 294 EGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTIT 353

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T LI  F   G+ + A  +F  M+ +G   N+ TY+ L+     +  +  A  ++E+M 
Sbjct: 354 YTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ 413

Query: 125 E---NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +   + + PNI +Y++L+ GLC  G +E+AL  F       +   ++TY I+I+G CKAG
Sbjct: 414 KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAG 473

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A+ L+ S+   G+ P+ +  +T+
Sbjct: 474 KVKDALNLFCSLPSKGVKPNVVTYTTM 500



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 108/203 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L   L   G+  D+ T N ++  +C  ++   A     KL  +  +P+  TFT 
Sbjct: 87  FDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTS 146

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC   R+++A  M ++M+E G K +VV Y+ +ID   K+ ++ +A  ++ +M    
Sbjct: 147 LINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYG 206

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++V Y+ L++GLC  G   +A       +   + PDV+T+  LI  + K G+  +A 
Sbjct: 207 IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAK 266

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +LY+ M++  I P+    ++L +
Sbjct: 267 ELYNEMIQMSIAPNIFTYTSLIN 289



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + AL LF  + +    P II +  ++     + + D  + L + L  + +  +  T  
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++ FC+  +   A+    K+++ G + ++ T++ LI+G+     ++ A  +  +M E 
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++V Y+ +ID LCK G ++ AL  F+   +  + PDVV Y  L+ G C +GR  +A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M++  I PD +  + L D
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALID 254



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 86/151 (56%), Gaps = 3/151 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL---KPNSITF 65
           + A ++FG +  RG+ P+I TYN ++   C   ++++A+ +FE +   ++    PN  T+
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +L+   C  G+++ A M+F  M ++     ++TY+ +I G  K+  +K A +++  +  
Sbjct: 428 NVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPS 487

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
             + PN+V+Y+ +I GL + GLM EA   F 
Sbjct: 488 KGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 8   LDAALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           ++ AL +F  +  R   G+ P+I TYN ++ G C   +L++A+ +F  +    +    IT
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIIT 461

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +TI+I   CK G++ DA  +F  +  KG K NVVTY+ +I G F+   M  A  ++ +M 
Sbjct: 462 YTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521

Query: 125 ENNIS 129
           E+ +S
Sbjct: 522 EDGVS 526


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 122/205 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT+I GY  L  LDE  +L   +     +P+  
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ILI+  CKEG++D+A  +F++ML+ G   N VT++ LI G+ K++ +  A ++Y++M
Sbjct: 208 TYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +SP++++Y+ LI GLCK+G +++        + N L PD ++Y  LI G CK G  
Sbjct: 268 LSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A++L + M++  I  D +  + L
Sbjct: 328 EIALELRNKMIQESIRLDDVAYTAL 352



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 109/199 (54%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G +PD+ TY+ +I G C   +LDEA +LF ++    L PN 
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LI   CK  ++D A  ++ +ML +G   +++TY+ LI G  K   +K   D+ +E
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N + P+ +SY+ LIDG CK G +E AL   +  +   +  D V Y  LI   C+ GR
Sbjct: 302 MIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 AGDAEKMLREMLSVGLKPD 380



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 110/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A +LF ++ D GL P+ +T+ T+I G+C   ++D A+++++++    L P+
Sbjct: 216 LCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +     +  +M+  G K + ++Y+ LIDG  K  +++ A ++  
Sbjct: 276 LITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRN 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +I  + V+Y+ LI  LC+ G   +A       L   L PD  TY ++I  +CK  
Sbjct: 336 KMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKR 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A +L   M R+G +P
Sbjct: 396 DSKTASKLLREMQRDGPVP 414



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  LI+ + 
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D+   + S M   G + +V TYS LI+G  K   +  A +++ EM +N + PN V
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LI G CK   ++ A+  +   L   L PD++TY  LI G CK G   +   L D M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302

Query: 194 LRNGIMPDGLLLSTLAD 210
           + NG+ PD +  +TL D
Sbjct: 303 IMNGLKPDKISYTTLID 319



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L     L  ++   GL+PD I+Y T+I G C    L+ A++L  K+    ++ +
Sbjct: 286 LCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K ++ K+A  +  
Sbjct: 346 DVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLR 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMQRDGPVPGVVT 418



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 45/223 (20%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT----FTILIDAFCKEGRMDDAT 82
           +I   ++I    S    D A  +FE +  ++ K   I+    F+ L+ A+ + G + DA 
Sbjct: 29  LIEAKSLIQVVVSRKGKDSASDVFEAI--LETKGTQISDFYVFSGLMIAYLESGFVRDAV 86

Query: 83  MMFSKMLEKGPKANVVTYSC--LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
             F   L K  K  V   +C  +++   + +  K  +D Y+E+ E     ++  ++IL+ 
Sbjct: 87  QCFR--LTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQ 144

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY----------------------- 177
             CK G M  A   F       L P VV++  LI GY                       
Sbjct: 145 RFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQP 204

Query: 178 ------------CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                       CK G+  EA +L++ ML NG++P+G+  +TL
Sbjct: 205 DVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTL 247


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  LFG++  RGL P ++++NT+I GYC    LD+  +L   +   ++ P+
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKEG++DDA  +F +M ++G   N VT++ LI+G+  +       ++Y+
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQ 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P++++Y+ LI+GLCK G + EA           L PD  TY +LI G CK G
Sbjct: 355 QMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A+++   M++ GI  D +  + L
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTAL 441



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 6/210 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  ++++ Q+  +G++PD+ITYNT+I G C +  L EA +L  ++T   LKP+  T+T+L
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CKEG ++ A  +  +M+++G + + V ++ LI G+ +   +  A     EM E  I
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 129 SPNIVSYSILIDGLCKRGLMEEA---LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            P+  +Y+++I G CK+G ++     L    C  D H+ P VVTY +L+ G CK G+   
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC--DGHV-PGVVTYNVLLNGLCKQGQMKN 523

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           A  L D+ML  G++PD +  + L +  LQ+
Sbjct: 524 ANMLLDAMLNLGVVPDDITYNILLERTLQA 553



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KLF ++ DRGL P+ +T+ T+I G+C   R D  +++++++    +KP+
Sbjct: 305 LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPD 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+  CK G + +A  +  +M ++G K +  TY+ LIDG  K  +++SA ++ +
Sbjct: 365 VITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRK 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I  + V+++ LI G C+ G + EA       L+  + PD  TY ++I G+CK G
Sbjct: 425 EMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  +G +P
Sbjct: 485 DVKTGFKLLKEMQCDGHVP 503



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 35  CGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           CGY       LN    A   +E++      P+   F +L+   CKE ++++A ++F ++ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           ++G +  VV+++ LI+GY KS N+   F +   M EN + P++ +YS+LI+GLCK G ++
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLD 312

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A   F    D  L+P+ VT+  LI G+C  GR    M++Y  MLR G+ PD +  +TL 
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLI 372

Query: 210 D 210
           +
Sbjct: 373 N 373



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   + ++ D G  PD+  +N ++   C  ++++EA  LF ++    L+P  ++F  LI+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK G +D    +   M+E     +V TYS LI+G  K   +  A  ++ EMC+  + P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++ LI+G C  G  +  +  +   L   + PDV+TY  LI G CK G   EA +L 
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M + G+ PD    + L D
Sbjct: 389 IEMTQRGLKPDKFTYTMLID 408



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 77/137 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L++AL++  ++   G+E D + +  +I G+C   ++ EA +   ++    +KP+  
Sbjct: 412 KEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++I  FCK+G +     +  +M   G    VVTY+ L++G  K   MK+A  + + M
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531

Query: 124 CENNISPNIVSYSILID 140
               + P+ ++Y+IL++
Sbjct: 532 LNLGVVPDDITYNILLE 548



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 2/138 (1%)

Query: 74  KEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           ++G+ + A+ +F+ +LE +G   + + +S L++ Y  S     A   +  + ++N+    
Sbjct: 132 RKGK-NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF 190

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            S   L D L K  L   A   +   LD    PDV  + +L+   CK  +  EA  L+  
Sbjct: 191 HSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 193 MLRNGIMPDGLLLSTLAD 210
           + + G+ P  +  +TL +
Sbjct: 251 IGKRGLRPTVVSFNTLIN 268


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 116/210 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +F ++  +G+ P+I+TYN++I G C L        L  ++   ++ P+
Sbjct: 160 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T   ++DA CKEG + +A  +   M+ +G + NVVTY+ L+DG+     +  A  V++
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFD 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +   N++SY+ LI+G CK   +++A+Y F       L P+ VTY  LI G C  G
Sbjct: 280 TMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVG 339

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +   TL+DY
Sbjct: 340 RLQDAISLFHEMVARGQIPDLVTYRTLSDY 369



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  H    L L  Q+   G+ PD+ T   +I   C LNR+D A     K+  +  +P+
Sbjct: 55  IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TFT LI   C EG++ +A  +F KM+ +G + NVVTY  LI+G  K + +  AF+++ 
Sbjct: 115 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFS 174

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ISPNIV+Y+ LI GLCK    +      +  +D+ ++PDV T   ++   CK G
Sbjct: 175 EMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEG 234

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  + D M+  G+ P+ +  + L D
Sbjct: 235 MVAEAHDVVDMMIHRGVEPNVVTYNALMD 263



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 121/210 (57%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +    ++I+YNT+I GYC +  +D+A+ LFE+++  +L PN++T+  
Sbjct: 271 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 330

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F +M+ +G   ++VTY  L D   K++++  A  + + +  +N
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 390

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+I  Y+ ++DG+C+ G +E+A   F       L P+V TY I+I G CK G   EA 
Sbjct: 391 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 450

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L+  M +NG  P+         YNL + G
Sbjct: 451 KLFSEMNKNGCSPND------CTYNLITRG 474



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 106/195 (54%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  +G+ PDI TYN++I   C+L        L  ++   ++ PN + F+ ++DA CKEG
Sbjct: 663 KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +  A  +   M+++G + +VVTY+ L+DG+     M  A  V++ M      PN+ SY+
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ILI+G C+   M++A+          L+ D VTY  LI G C  GR   A+ L+  M+ +
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842

Query: 197 GIMPDGLLLSTLADY 211
           G +PD +    L DY
Sbjct: 843 GQIPDLVTYRILLDY 857



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 110/195 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +G  P++ +YN +I GYC + R+D+A+ L E+++   L  +++T+  
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+  A  +F +M+  G   ++VTY  L+D   K+ ++  A  + + +  +N
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I+ Y+I IDG+C+ G +E A   F       L PDV TY I+I G CK G   EA 
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 938

Query: 188 QLYDSMLRNGIMPDG 202
           +L+  M  N I  + 
Sbjct: 939 KLFRKMDENDIWSNS 953



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  RG+EPD++TY  ++ G+C  + +DEAV++F+ +      PN
Sbjct: 718 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 777

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +C+  RMD A  +  +M  +G  A+ VTY+ LI G      ++ A  ++ 
Sbjct: 778 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 837

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++V+Y IL+D LCK   + EA+        ++L  D++ Y I I G C+AG
Sbjct: 838 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 897

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L+ ++   G+ PD
Sbjct: 898 ELEAARDLFSNLSSKGLQPD 917



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C       L  ++ D  + PD+ T NT++   C    + EA  + + +    ++PN
Sbjct: 195 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  C    +D A  +F  M+ K   ANV++Y+ LI+GY K Q++  A  ++E
Sbjct: 255 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PN V+Y+ LI GLC  G +++A+  FH  +    +PD+VTY  L    CK  
Sbjct: 315 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 374

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +AM L  ++  +   PD  + +T+ D
Sbjct: 375 HLDKAMALLKAIEGSNWDPDIQIYTTILD 403



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL   D A     ++   G +PD  T+ T+I G C   ++ EA+ LF+K+     +PN 
Sbjct: 91  CHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNV 150

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LI+  CK+ ++ +A  +FS+M+ KG   N+VTY+ LI G  K    K    +  E
Sbjct: 151 VTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 210

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M ++ I P++ + + ++D LCK G++ EA       +   + P+VVTY  L+ G+C    
Sbjct: 211 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 270

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A++++D+M+    + + +  +TL +
Sbjct: 271 VDVAVKVFDTMVHKDCVANVISYNTLIN 298



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 23/239 (9%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ PD+ T N +I  +C L RL  A  +  KL  +  +P+ +T+ 
Sbjct: 596 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYG 655

Query: 67  ILIDAFCK---EGRMDD-------------------ATMMFSKMLEKGPKANVVTYSCLI 104
            L++  CK   +G   D                    T + ++M+      NVV +S ++
Sbjct: 656 TLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 715

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           D   K   +  A DV + M +  + P++V+Y+ L+DG C R  M+EA+  F   +    +
Sbjct: 716 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 775

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           P+V +Y ILI GYC+  R  +AM L + M   G++ D +  +TL  + L   G  +H I
Sbjct: 776 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI-HGLCHVGRLQHAI 833



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++  +   P  + +N ++            + L  ++    + P+  T  I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ C   R+D A    +K+L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK   + EA   F   +   + P++VTY  LI G CK        
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + M+ + IMPD   L+T+ D
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVD 228



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 22/216 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P  + +  ++     +      + L  ++    + P+  T  I
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LI++FC   R+  A  + +K+L+ G + +VVTY  L++G  K      + D++       
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIH 681

Query: 121 ---------------EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
                           EM  + I PN+V +S ++D LCK G++  A       +   + P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           DVVTY  L+ G+C      EA++++D+M+  G +P+
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 777



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ L   +     +PDI  Y TI+ G C    L++A  LF  L+   L+PN
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   CK+G + +A+ +FS+M + G   N  TY+ +  G+ ++       ++ E
Sbjct: 430 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 489

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L+  L   GL
Sbjct: 490 EMLARGFSVDVSTTTLLVGMLSDDGL 515



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           ++NT        N LDEA+  F ++   Q  P+++ F  L+ +  K         +  +M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G   +V T + +I+       +  AF    ++ +    P+  +++ LI GLC  G +
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            EAL+ F   +     P+VVTY  LI G CK  + TEA  ++  M+  GI P+
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPN 184



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 13/171 (7%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            N LD+A+  F ++  +   P+++ FT L+ +  K         + ++M   G   +V T
Sbjct: 559 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 618

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
            + LI+ +   + +  AF V  ++ +    P++V+Y  L++GLCK              +
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MI 665

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              + PD+ TY  LI   C          L + M+ + IMP+ ++ ST+ D
Sbjct: 666 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 716



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 3/132 (2%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A+ LF ++   G  PD++TY  ++   C  + L EA+ L + +    L  + 
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 883

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + + I ID  C+ G ++ A  +FS +  KG + +V TY+ +I G  K   +  A  ++ +
Sbjct: 884 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 943

Query: 123 MCENNISPNIVS 134
           M EN+I  N  S
Sbjct: 944 MDENDIWSNSTS 955



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL  A+ L   +    L+ DI+ YN  I G C    L+ A  LF  L+   L+P+
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
             T+ I+I   CK G +D+A  +F KM E    +N
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +C  + A +L GQ+ ++GL P++ITYN +I GYC    +++AV + E +   +L PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  LI  +CK   +  A  + +KMLE+    +VVTY+ LIDG  +S N  SA+ +  
Sbjct: 428 TRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P+  +Y+ +ID LCK   +EEA   F       + P+VV Y  LI GYCKAG
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  + + ML    +P+ L  + L
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNAL 573



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 119/216 (55%), Gaps = 1/216 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ LF ++ D    P + TY  +I   C   R  EA+ L +++    +KPN  T+T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID+ C + + + A  +  +MLEKG   NV+TY+ LI+GY K   ++ A DV E M   
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SPN  +Y+ LI G CK  +  +A+   +  L+  +LPDVVTY  LI G C++G    A
Sbjct: 423 KLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            +L   M   G++PD    +++ D   +S   +E C
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 107/202 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + D+A +L   + DRGL PD  TY ++I   C   R++EA  LF+ L    + PN + +T
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CK G++D+A +M  KML K    N +T++ LI G      +K A  + E+M + 
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P + + +ILI  L K G  + A   F   L +   PD  TY   I+ YC+ GR  +A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             +   M  NG+ PD    S+L
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSL 678



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A K+F ++  +G   + + Y  +I G C   R+DEA+ LF K+   +  P   T+T+
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI + C   R  +A  +  +M E G K N+ TY+ LID        + A ++  +M E  
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+++Y+ LI+G CKRG++E+A+          L P+  TY  LI+GYCK+    +AM
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            + + ML   ++PD +  ++L D   +S
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRS 475



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 105/195 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A +   ++ + GL+PD  TY ++I GYC    LD A ++F ++     + N + +T
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C   R+D+A  +F KM +      V TY+ LI     S+    A ++ +EM E 
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PNI +Y++LID LC +   E+A       L+  L+P+V+TY  LI GYCK G   +A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412

Query: 187 MQLYDSMLRNGIMPD 201
           + + + M    + P+
Sbjct: 413 VDVVELMESRKLSPN 427



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A+ +  ++ +R + PD++TYN++I G C     D A +L   +    L P+  T+T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK  R+++A  +F  + +KG   NVV Y+ LIDGY K+  +  A  + E+M   
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN ++++ LI GLC  G ++EA       +   L P V T  ILI    K G    A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
              +  ML +G  PD    +T 
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTF 643



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 101/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF  L  +G+ P+++ Y  +I GYC   ++DEA  + EK+      PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+TF  LI   C +G++ +AT++  KM++ G +  V T + LI    K  +   A+  ++
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +   P+  +Y+  I   C+ G + +A        +N + PD+ TY+ LI+GY   G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A  +   M   G  P
Sbjct: 687 QTNFAFDVLKRMRDTGCEP 705



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 97/181 (53%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YNT++        +DE  Q++ ++   ++ PN  T+  +++ +CK G +++A    SK++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           E G   +  TY+ LI GY + +++ SAF V+ EM       N V+Y+ LI GLC    ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA+  F    D+   P V TY +LI+  C + R +EA+ L   M   GI P+    + L 
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 210 D 210
           D
Sbjct: 366 D 366



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 19/220 (8%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  L  ++   GL+P + T   +I         D A   F+++     KP++ T+T 
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I  +C+EGR+ DA  M +KM E G   ++ TYS LI GY        AFDV + M +  
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702

Query: 128 ISPNIVSYSILIDG---------------LCKRGLMEE---ALYAFHCALDNHLLPDVVT 169
             P+  ++  LI                 LC    M E    +      +++ + P+  +
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRN-GIMPDGLLLSTL 208
           Y  LI G C+ G    A +++D M RN GI P  L+ + L
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D A   F Q+   G +PD  TY T I  YC   RL +A  +  K+    + P+
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID-----GYFKSQ----- 111
             T++ LI  +   G+ + A  +  +M + G + +  T+  LI       Y K +     
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731

Query: 112 -----NM---KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNH 162
                NM    +  ++ E+M E++++PN  SY  LI G+C+ G +  A   F H   +  
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           + P  + +  L+   CK  +  EA ++ D M+  G +P
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITF 65
             D  ++L  ++ +  + P+  +Y  +I G C +  L  A ++F+ +   + + P+ + F
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             L+   CK  + ++A  +   M+  G    + +   LI G +K    +    V++ + +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
                + +++ I+IDG+ K+GL+E     F+    N       TY++LI G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 19/206 (9%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTII------------------CGYCSLNRLDEAVQLFEK 52
           A  +  ++ D G EP   T+ ++I                  C   ++   D  V+L EK
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQ 111
           +    + PN+ ++  LI   C+ G +  A  +F  M   +G   + + ++ L+    K +
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
               A  V ++M      P + S  +LI GL K+G  E     F   L      D + + 
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNG 197
           I+I G  K G      +L++ M +NG
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNG 896


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 116/210 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +F ++  +G+ P+I+TYN++I G C L        L  ++   ++ P+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T   ++DA CKEG + +A  +   M+ +G + NVVTY+ L+DG+     +  A  V++
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFD 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +   N++SY+ LI+G CK   +++A+Y F       L P+ VTY  LI G C  G
Sbjct: 340 TMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVG 399

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +   TL+DY
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDY 429



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 121/210 (57%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +    ++I+YNT+I GYC +  +D+A+ LFE+++  +L PN++T+  
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F +M+ +G   ++VTY  L D   K++++  A  + + +  +N
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+I  Y+ ++DG+C+ G +E+A   F       L P+V TY I+I G CK G   EA 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L+  M +NG  P+         YNL + G
Sbjct: 511 KLFSEMNKNGCSPND------CTYNLITRG 534



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  H    L L  Q+   G+ PD+ T   +I   C LNR+D A     K+  +  +P+
Sbjct: 80  IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TFT LI   C EG++ +A  +F KM+ +G + NVVTY  LI+G  K  N  +A  +  
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N  PN+V +S LID LCK   + EA   F   +   + P++VTY  LI G CK  
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  L + M+ + IMPD   L+T+ D
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 114/206 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G +P+++TY T+I G C +     A++L   +     +PN + 
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LID+ CK+ ++ +A  +FS+M+ KG   N+VTY+ LI G  K    K    +  EM 
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I P++ + + ++D LCK G++ EA       +   + P+VVTY  L+ G+C      
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A++++D+M+    + + +  +TL +
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLIN 358



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C       L  ++ D  + PD+ T NT++   C    + EA  + + +    ++PN
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  C    +D A  +F  M+ K   ANV++Y+ LI+GY K Q++  A  ++E
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PN V+Y+ LI GLC  G +++A+  FH  +    +PD+VTY  L    CK  
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 434

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +AM L  ++  +   PD  + +T+ D
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILD 463



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 92/194 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++  +   P  + +N ++            + L  ++    + P+  T  I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ C   R+D A    +K+L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  P+VV ++ LI   CK  + TEA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 188 QLYDSMLRNGIMPD 201
            ++  M+  GI P+
Sbjct: 231 NIFSEMITKGISPN 244



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ L   +     +PDI  Y TI+ G C    L++A  LF  L+   L+PN
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   CK+G + +A+ +FS+M + G   N  TY+ +  G+ ++       ++ E
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 549

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L+  L   GL
Sbjct: 550 EMLARGFSVDVSTTTLLVGMLSDDGL 575



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           ++NT        N LDEA+  F ++   Q  P+++ F  L+ +  K         +  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G   +V T + +I+       +  AF    ++ +    P+  +++ LI GLC  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EAL+ F   +     P+VVTY  LI G CK G  + A++L  SM +    P+ ++ STL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 209 AD 210
            D
Sbjct: 217 ID 218


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 129/223 (57%), Gaps = 4/223 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K   +  AL LFG++ D G+   + ++N ++ G CS  ++  A ++F+ ++ +   PN
Sbjct: 147 FFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPN 204

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I++TI+ID  CK  ++D A  +F +M++K    +VVTY  LIDG  K + +K A+D++E
Sbjct: 205 LISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE 264

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKA 180
           E       P +V+Y+ +IDGLCK G +E AL  +     + HL PD+ TY+ LI G   +
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            R  +A +LY+ ML  G  PD +  +TL D  L  SG ++  +
Sbjct: 325 NRGEKAYELYEEMLDTGCSPDVVTYNTLLD-GLCKSGCEDKAM 366



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 121/209 (57%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ LF Q+ D+ + PD++TY  +I G     R+ EA  LFE+       P 
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 274

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+  +ID  CK GR+++A  ++  M+ E   K ++ TYS LI+G   S   + A+++Y
Sbjct: 275 VVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELY 334

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCK 179
           EEM +   SP++V+Y+ L+DGLCK G  ++A+  F    + N   P+V+TY +LI  +CK
Sbjct: 335 EEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCK 394

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             R  +A++L   M    ++PD +  +T+
Sbjct: 395 VDRLGDAVKLAKEMEGRSLLPDAVTFTTV 423



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 108/194 (55%), Gaps = 2/194 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFTI 67
           + A +L+ ++ D G  PD++TYNT++ G C     D+A+++F K+    +  PN IT+T+
Sbjct: 328 EKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTV 387

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK  R+ DA  +  +M  +    + VT++ +I    K   +  A +++E + +  
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT- 446

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V ++ ++ G CK   +++A       LD+   P + TY  L+ G+C+ GR ++A+
Sbjct: 447 CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506

Query: 188 QLYDSMLRNGIMPD 201
            +Y  M+  G  P+
Sbjct: 507 IMYHEMIEMGFPPE 520



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 41/236 (17%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ +L L+G +    L PD++    +I      N   E  Q   K +  +   N  T   
Sbjct: 56  IEKSLGLYGDI----LVPDLV--GKVIHRIPDPNTAWEVFQWAGKQS--KFTHNRFTCNN 107

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  + K  R++DA + F   ++   + + V+Y+ L++G+FK+ ++K A  ++ EM ++ 
Sbjct: 108 LLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG 167

Query: 128 I---------------------------------SPNIVSYSILIDGLCKRGLMEEALYA 154
           I                                 SPN++SY+I+IDGLCK   +++A+  
Sbjct: 168 IAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITL 227

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           F   +D  + PDVVTY  LI G  K  R  EA  L++     G  P  +  +T+ D
Sbjct: 228 FKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMID 283



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 5/126 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLKPNSIT 64
            L  A+KL  ++  R L PD +T+ T+I   C  +R+DEA +LFE +  TC   KP+S+ 
Sbjct: 397 RLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTC---KPDSVL 453

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F  ++  +CK  R+DDA  +  +ML+ G    + TY+ L+ G+ ++     A  +Y EM 
Sbjct: 454 FNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMI 513

Query: 125 ENNISP 130
           E    P
Sbjct: 514 EMGFPP 519



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF  +  +  +PD + +NT++ GYC + R+D+A +L +++      P 
Sbjct: 427 LCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T L+  FC+ GR  DA +M+ +M+E G
Sbjct: 486 LATYTALVTGFCRTGRYSDALIMYHEMIEMG 516


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 115/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK  +LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G  P
Sbjct: 396 DVWTGSKLLKEMQRDGYAP 414



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 74/133 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +  +P++V+
Sbjct: 406 EMQRDGYAPSVVT 418


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 6/211 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  RG +PD+ +Y+ +I GYC + R+DEA QLF ++    L PN++++T LI 
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFC+ G++ +A  +F  M   G   ++ TYS L++G+ K   +  AF ++  M    + P
Sbjct: 415 AFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ILID +CK G +  A   F     + L PDV  Y  +I G CK G   EA++ +
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
             M  +G  P+         YN+   G  +H
Sbjct: 535 RKMEEDGCPPNEF------SYNVIIRGFLQH 559



 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 116/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ AL +F  +  +G+ P +++Y ++I G CS +R  EA  +  ++T + + P+
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LID FCKEG + +A  +   M E G + NV+TY+ L+ GY     +  A  +++
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ SYSILI+G C    ++EA   F+  +   L P+ V+Y  LI  +C+ G
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLG 420

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA +L+  M  NG +PD
Sbjct: 421 KLREARELFKDMHTNGYLPD 440



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 124/207 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  A  +   +T+ G+EP++ITYN+++ GY     + EA +LF+ +     KP+  
Sbjct: 313 KEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF 372

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ILI+ +C   R+D+A  +F++M+ +G   N V+Y+ LI  + +   ++ A +++++M
Sbjct: 373 SYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDM 432

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N   P++ +YS+L++G CK+G + +A   F      +L P++V Y ILI   CK+G  
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L+  +  +G+ PD  + +T+ +
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIIN 519



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 1/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D    +  ++   GL+P IIT+ T+I G C      +A++LF+ +     +P+  T+T
Sbjct: 141 HVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYT 200

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +  KM E G + +VVTYS LID   K + +  A D++  M   
Sbjct: 201 TIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAK 260

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP +VSY+ LI GLC     +EA    +     +++PD+VT+++LI  +CK G   EA
Sbjct: 261 GISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEA 320

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD-YNLQ 214
             +  +M   G+ P+ +  ++L   Y+LQ
Sbjct: 321 QGVLKTMTEMGVEPNVITYNSLMHGYSLQ 349



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      AL+LF  +  RG +PD+ TY TII G C +     A  L +K+  V  +P+
Sbjct: 171 LCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID+ CK+  +++A  +FS M  KG    VV+Y+ LI G       K A  +  
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLN 290

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   NI P+IV++S+LID  CK G + EA        +  + P+V+TY  L+ GY    
Sbjct: 291 EMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQM 350

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA +L+D M+  G  PD    S L +
Sbjct: 351 EVVEARKLFDVMITRGCKPDVFSYSILIN 379



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 106/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + DA + L  Q+   GL P+  T N +I  +C +  +D    +  K+  + L+P  ITFT
Sbjct: 106 YYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFT 165

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G    A  +F  M+ +G + +V TY+ +I+G  K     +A  + ++M E 
Sbjct: 166 TLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV 225

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+YS LID LCK  L+ EAL  F       + P VV+Y  LI+G C   R  EA
Sbjct: 226 GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEA 285

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             + + M    IMPD +  S L D
Sbjct: 286 SAMLNEMTSLNIMPDIVTFSLLID 309



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L  A +LF  +    L+P+++ Y  +I   C    L+ A +LF +L    L+P+  
Sbjct: 453 KQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQ 512

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +I+  CKEG +D+A   F KM E G   N  +Y+ +I G+ + ++   A  +  EM
Sbjct: 513 IYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 572



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A KLF +L   GL+PD+  Y TII G C    LDEA++ F K+      PN  
Sbjct: 488 KSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEF 547

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++ ++I  F +      A  +  +M +KG
Sbjct: 548 SYNVIIRGFLQHKDESRAVQLIGEMRDKG 576


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 117/198 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ +++ AL+ F  ++D+ L PDI+TYNT+I G C    L +A +L++ +   ++ PN +
Sbjct: 416 RDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ILID+ C++G++D+A     +M+ KG   N++TY+ +I GY +S N+        +M
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P++++Y+ LI G  K G M EA        + ++ PD VTY ++I G+   G  
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNM 595

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  +Y  M   GI PD
Sbjct: 596 QEADWVYKKMGARGIEPD 613



 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A +L  ++ +RG+ PD+ T+ T+I GYC    +++A+Q F+ ++  +L+P+
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  C++G +  A  ++  M  +    N VTYS LID + +   + +AF   +
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I PNI++Y+ +I G C+ G + +          + ++PD++TY  LI GY K G
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEG 558

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  EA  L   M    + PD +       YN+  SG   H
Sbjct: 559 KMHEAFNLLKIMENENVQPDAVT------YNMIISGFSVH 592



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 118/198 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  ++   G  PD++TYNT++ G C   RL +A +L  ++    + P+  TFT LI 
Sbjct: 353 ALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIH 412

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C++G ++ A   F  + ++  + ++VTY+ LIDG  +  ++  A +++++M    I P
Sbjct: 413 GYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFP 472

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+YSILID  C++G ++ A       ++  ++P+++TY  +I+GYC++G  ++  Q  
Sbjct: 473 NHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFL 532

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M  + +MPD +  +TL
Sbjct: 533 PKMRHDKVMPDLITYNTL 550



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 12/207 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++AA+ L   +  +G++P ++TYN+++ G     R D+A ++F  +    + P+  +F +
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM 269

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC+ G +++A   + +M  +    +VV++SCLI  + +   M  A +   EM E  
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL------YAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           + P+ V Y+++I G C+ GLM EAL       AF C      LPDVVTY  L+ G CK  
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGC------LPDVVTYNTLLNGLCKER 383

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R ++A +L + M   G+ PD    +TL
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTL 410



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 114/201 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +   +D A +   ++ + GL PD + Y  +I G+C    + EA+++ +++      P
Sbjct: 308 LFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L++  CKE R+ DA  + ++M E+G   ++ T++ LI GY +  N++ A   +
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + + +  + P+IV+Y+ LIDG+C++G + +A   +       + P+ VTY+ILI  +C+ 
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+   A    D M+  GI+P+
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPN 508



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L+ AL+ + ++  R + PD+++++ +I  +     +D A +   ++    L P+ +
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T++I  FC+ G M +A  +  +M+  G   +VVTY+ L++G  K + +  A ++  EM
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P++ +++ LI G C+ G +E+AL  F    D  L PD+VTY  LI G C+ G  
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A +L+D M    I P+ +  S L D
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILID 482



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++    D A ++F  +   G+ PD+ ++N +I G+C    L+EA++ ++++   ++ P+
Sbjct: 239 LLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F+ LI  F + G MD A     +M E G   + V Y+ +I G+ ++  M  A  V +
Sbjct: 299 VVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRD 358

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P++V+Y+ L++GLCK   + +A    +   +  + PD+ T+  LI GYC+ G
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+Q +D++    + PD +  +TL D
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLID 447



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 105/195 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +  ++  R + PD++T+N ++        ++ A+ L + +    +KP  +T+  ++    
Sbjct: 181 VISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLL 240

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR D A  +F  M   G   +V +++ LI G+ ++  ++ A   Y+EM    ++P++V
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           S+S LI    +RG M+ A        +  L+PD V Y ++I G+C+AG   EA+++ D M
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360

Query: 194 LRNGIMPDGLLLSTL 208
           +  G +PD +  +TL
Sbjct: 361 VAFGCLPDVVTYNTL 375



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 95/183 (51%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           E +  T N ++  YC   +  E   +  ++    + P+ +T  +++DA  + G ++ A  
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +   M+ KG K  +VTY+ ++ G  ++     A +V+  M    ++P++ S+++LI G C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G +EEAL  +       + PDVV+++ LI  + + G    A +    M   G+MPDG+
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 204 LLS 206
           + +
Sbjct: 336 IYT 338



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 82/148 (55%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T  I++ ++CK  +  +   + S+M ++    +VVT++ ++D  F++ ++++A  + 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    I P +V+Y+ ++ GL + G  ++A   F       + PDV ++ +LI G+C+A
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA++ Y  M    + PD +  S L
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCL 305



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 58/114 (50%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           +L    + N  T + ++  Y K+        V  EM +  + P++V++++++D   + G 
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +E A+      +   + P +VTY  +++G  + GR  +A +++ +M   G+ PD
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL+L   +  RG  P+++T+N+II G C  +R  EA Q+  ++    L P+ +
Sbjct: 305 KASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKV 364

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI   CK G  + A+ +F +M+ K  + +V+T+  LIDG  K+  +++A D+ + M
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM 424

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+V+Y++L+ GLCK G +EE        + +  +P+ +TY  L+   C+A R 
Sbjct: 425 GNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            +A+QL   +   G  PD +  + L D  L  SG  E  I
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVD-GLWKSGKTEQAI 523



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 6/223 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L A ++LF +L  RG  PD++TYNT+I   C    L+EA +L   ++     PN
Sbjct: 91  LCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPN 150

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
            +T+++LI+  CK GR+D+A  +  +M  K      N++TY+  +DG  K      A ++
Sbjct: 151 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 210

Query: 120 YEEMCENN--ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
              + + +  +SP+ V++S LIDGLCK G  +EA      A     +P+VVTY  L+ G 
Sbjct: 211 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIA--GGYVPNVVTYNALVNGL 268

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           CKA +   A  + +SM+  G+ PD +  S L D   ++S   E
Sbjct: 269 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 311



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  +   + D+G+ PD+ITY+ ++  +C  +R+DEA++L   +      PN
Sbjct: 268 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +ID  CK  R  +A  +  ++  +    + VT++ LI G  K+ N + A  ++E
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFE 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+ P+++++  LIDGLCK G +E A        +  + P+VVTY +L+ G CK+G
Sbjct: 388 EMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  E  +  + M+ +G +P+ +   +L
Sbjct: 448 RIEEPCEFLEEMVSSGCVPESMTYGSL 474



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 7/205 (3%)

Query: 11  ALKLF-GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AL++F G++   G+ P I+TYNTII G C  N L   ++LFE+L      P+ +T+  LI
Sbjct: 64  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLI 123

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN--N 127
           D+ CK G +++A  +   M  +G   NVVTYS LI+G  K   +  A ++ +EM     +
Sbjct: 124 DSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 183

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILIRGYCKAGRPTE 185
           + PNI++Y+  +DGLCK+ +  EA        D  L   PD VT++ LI G CK G+  E
Sbjct: 184 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A    D M+  G +P+ +  + L +
Sbjct: 244 ACN--DDMIAGGYVPNVVTYNALVN 266



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 112/201 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P+++TYN ++ G C  ++++ A  + E +    + P+ IT+++L+DAFCK  R+D+A
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M  +G   NVVT++ +IDG  KS     AF +  ++    + P+ V+++ILI G
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G  E+A   F   +  ++ PDV+T+  LI G CKAG+   A  + D M   G+ P+
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432

Query: 202 GLLLSTLADYNLQSSGSQEHC 222
            +  + L     +S   +E C
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPC 453



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 41/246 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------- 54
           L K   L+ A +L G ++ RG  P+++TY+ +I G C + R+DEA +L +++T       
Sbjct: 126 LCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 185

Query: 55  --------------------------------CVQLKPNSITFTILIDAFCKEGRMDDAT 82
                                            +++ P+++TF+ LID  CK G+ D+A 
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 245

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
                M+  G   NVVTY+ L++G  K+  M+ A  + E M +  ++P++++YS+L+D  
Sbjct: 246 N--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK   ++EAL   H        P+VVT+  +I G CK+ R  EA Q+   +    ++PD 
Sbjct: 304 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK 363

Query: 203 LLLSTL 208
           +  + L
Sbjct: 364 VTFNIL 369



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 101/196 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++  Q+ +R L PD +T+N +I G C     ++A  LFE++    ++P+ +TF  LID
Sbjct: 347 AFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALID 406

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+++ A  +   M   G   NVVTY+ L+ G  KS  ++   +  EEM  +   P
Sbjct: 407 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVP 466

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             ++Y  L+  LC+    ++AL            PD VTY IL+ G  K+G+  +A+ + 
Sbjct: 467 ESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 526

Query: 191 DSMLRNGIMPDGLLLS 206
           + M+  G  PD    +
Sbjct: 527 EEMVGKGHQPDSFTFA 542



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 84/168 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++AA  +   + + G+ P+++TYN ++ G C   R++E  +  E++      P 
Sbjct: 408 LCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+  L+ A C+  R DDA  + SK+   G   + VTY+ L+DG +KS   + A  V E
Sbjct: 468 SMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 527

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           EM      P+  +++    GL + G +   +      L   +LPD  T
Sbjct: 528 EMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 69/139 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++   +   ++   G  P+ +TY +++   C  +R D+A+QL  KL      P+
Sbjct: 443 LCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ IL+D   K G+ + A  +  +M+ KG + +  T++    G  +S N+    ++  
Sbjct: 503 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562

Query: 122 EMCENNISPNIVSYSILID 140
            +    + P+  + S ++D
Sbjct: 563 VVLAKGMLPDATTCSSILD 581



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           S ++  Y+I++  LC+ G    AL  F   +  + + P +VTY  +I G CK+      M
Sbjct: 42  SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L++ +++ G  PD +  +TL D
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLID 124


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 116/210 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +F ++  +G+ P+I+TYN++I G C L        L  ++   ++ P+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T   ++DA CKEG + +A  +   M+ +G + NVVTY+ L+DG+     +  A  V++
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFD 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   +   N++SY+ LI+G CK   +++A+Y F       L P+ VTY  LI G C  G
Sbjct: 340 TMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVG 399

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +   TL+DY
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDY 429



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 121/210 (57%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +    ++I+YNT+I GYC +  +D+A+ LFE+++  +L PN++T+  
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F +M+ +G   ++VTY  L D   K++++  A  + + +  +N
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+I  Y+ ++DG+C+ G +E+A   F       L P+V TY I+I G CK G   EA 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L+  M +NG  P+         YNL + G
Sbjct: 511 KLFSEMNKNGCSPND------CTYNLITRG 534



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  H    L L  Q+   G+ PD+ T   +I   C LNR+D A     K+  +  +P+
Sbjct: 80  IAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPD 139

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TFT LI   C EG++ +A  +F KM+ +G + NVVTY  LI+G  K  N  +A  +  
Sbjct: 140 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 199

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N  PN+V +S LID LCK   + EA   F   +   + P++VTY  LI G CK  
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  L + M+ + IMPD   L+T+ D
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 114/206 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G +P+++TY T+I G C +     A++L   +     +PN + 
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LID+ CK+ ++ +A  +FS+M+ KG   N+VTY+ LI G  K    K    +  EM 
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I P++ + + ++D LCK G++ EA       +   + P+VVTY  L+ G+C      
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A++++D+M+    + + +  +TL +
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLIN 358



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C       L  ++ D  + PD+ T NT++   C    + EA  + + +    ++PN
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  C    +D A  +F  M+ K   ANV++Y+ LI+GY K Q++  A  ++E
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PN V+Y+ LI GLC  G +++A+  FH  +    +PD+VTY  L    CK  
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 434

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +AM L  ++  +   PD  + +T+ D
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILD 463



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 92/194 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++  +   P  + +N ++            + L  ++    + P+  T  I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ C   R+D A    +K+L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  P+VV ++ LI   CK  + TEA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 188 QLYDSMLRNGIMPD 201
            ++  M+  GI P+
Sbjct: 231 NIFSEMITKGISPN 244



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HLD A+ L   +     +PDI  Y TI+ G C    L++A  LF  L+   L+PN
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   CK+G + +A+ +FS+M + G   N  TY+ +  G+ ++       ++ E
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 549

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L+  L   GL
Sbjct: 550 EMLARGFSVDVSTTTLLVGMLSDDGL 575



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           ++NT        N LDEA+  F ++   Q  P+++ F  L+ +  K         +  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G   +V T + +I+       +  AF    ++ +    P+  +++ LI GLC  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EAL+ F   +     P+VVTY  LI G CK G  + A++L  SM +    P+ ++ STL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 209 AD 210
            D
Sbjct: 217 ID 218


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A  L G +   G+ PD+ TY   I G C   R+ +A+++FE++    L PN++
Sbjct: 289 KASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTV 348

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
             T LIDA CKEG +     +  +M  +G KA++V Y+ L++G+ + ++MK+A D+ EEM
Sbjct: 349 VLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM 408

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ + P+ V+Y+ LIDG CK G ++ A+       D  +  D VTY  LI G  KAGR 
Sbjct: 409 RKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRS 468

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A ++   M+  G+ PD    + + D
Sbjct: 469 VDAERILCEMMEAGLQPDNTTYTMVID 495



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + A L+L  ++  RG++ D++ YN ++ G+C +  +  A  + E++    LKP+ +
Sbjct: 359 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 418

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG +D A  M  +M ++G   + VTY+ LI G  K+     A  +  EM
Sbjct: 419 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEM 478

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+++ID  CK G ++          +    P +VTY +++ G+C  G+ 
Sbjct: 479 MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQM 538

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L ++ML  G+ P+ +  + L D
Sbjct: 539 KNADMLLNAMLNIGVCPNDITYNILLD 565



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 119/215 (55%), Gaps = 4/215 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA  +  ++   GL+PD +TY T+I G C    LD A+++ ++++   +  + +T+T 
Sbjct: 398 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 457

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K GR  DA  +  +M+E G + +  TY+ +ID + K+ ++K+ F   +EM    
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 517

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P IV+Y+++++G C  G M+ A    +  L+  + P+ +TY IL+ G+CK G+  +  
Sbjct: 518 KNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 577

Query: 188 QLYDSMLRNGIMPD-GLLLSTLADYNLQSSGSQEH 221
           +L  +    G++ D G+  S + ++  + S    H
Sbjct: 578 ELKSA---KGMVSDFGVYTSLINEFVKKKSAKSYH 609



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   +  L D G+ P+   +N ++       +L  A  +F+++    ++P  +TF  L+ 
Sbjct: 226 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 285

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +++A  +   M + G   +V TY   I G  K+  ++ A +++EEMCE  ++P
Sbjct: 286 GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNP 345

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V  + LID  CK G +   L          +  D+V Y  L+ G+C+      A  + 
Sbjct: 346 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 405

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M ++G+ PD +  +TL D
Sbjct: 406 EEMRKDGLKPDKVTYTTLID 425



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 83/147 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+++  +++D G+  D +TY  +I G     R  +A ++  ++    L+P++ 
Sbjct: 429 KEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNT 488

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++IDAFCK G +        +M  KG    +VTY+ +++G+     MK+A  +   M
Sbjct: 489 TYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAM 548

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEE 150
               + PN ++Y+IL+DG CK G + +
Sbjct: 549 LNIGVCPNDITYNILLDGHCKHGKVRD 575



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)

Query: 40  LNRLD---EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           +NRL    EA   +  L    + P +  F +L+    + G++  A  +F +ML +G +  
Sbjct: 217 MNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPT 276

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           VVT++ L+ G  K+ ++ +A  +   M +  I+P++ +Y   I GLCK G +++A+  F 
Sbjct: 277 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 336

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              +  L P+ V    LI  +CK G  T  ++L   M   G+  D
Sbjct: 337 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKAD 381


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 137 KEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 196

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LIDG+ KS  +  A ++Y++M
Sbjct: 197 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQM 256

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++SP++++Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKITYTTLIDGCCK 312

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 313 EGDLETAFEHRKRMIQENIRLDDVAYTAL 341



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 171 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNG 230

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 231 VTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 290

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 350

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 351 YLDAEKVLREMLSAGLKPD 369



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 205 LCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPD 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 265 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRK 324

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 325 RMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKG 384

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                 +L   M R+G +P      ++  YN+  +G
Sbjct: 385 DVWTGSKLLKEMQRDGHVP------SVVTYNVLMNG 414



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 101/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F  +T   L+P+ ++F  L++ + + G +D+ 
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S M   G + +V TYS LI+G  K   M  A ++++EM +  + PN V+++ LIDG
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 300 KITYTTLID 308



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 77/132 (58%)

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + ++LE G  A++  ++ L+  + K  +++ A  V+  + +  + P++VS++ L++G  +
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G ++E          + + PDV TY++LI G CK  +  +A +L+D ML  G++P+G+ 
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232

Query: 205 LSTLADYNLQSS 216
            +TL D + +S 
Sbjct: 233 FTTLIDGHCKSG 244


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + KE  ++AA  LF ++  RGL PD +TYN++I GY  + RLD+ V  FE++  +  +P+
Sbjct: 143 MWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+ FCK G++      + +M + G K NVV+YS L+D + K   M+ A   Y 
Sbjct: 203 VITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYV 262

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      PN  +Y+ L+D  CK G + +A    +  L+  +  +VVTY  LI G C A 
Sbjct: 263 DMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAE 322

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           R  EA +L+  M+  G++P+      LA YN
Sbjct: 323 RMKEAEKLFGKMVTAGVIPN------LASYN 347



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 109/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  +  F ++     EPD+ITYN++I  +C   +L + ++ + ++    LKPN ++++ 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DAFCKE  M  A   +  M   G   N  TY+ L+D   K  N+  AF +  EM E  
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N+V+Y+ LIDGLC    M+EA   F   +   ++P++ +Y  LI G+ KA     A+
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + +   GI PD LL  T 
Sbjct: 364 ELLNELKGRGIQPDLLLYGTF 384



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 116/217 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L   L+ + ++   GL+P++++Y+T++  +C  + + +A++ +  +  V   PN  
Sbjct: 215 KSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEF 274

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+DA CK G + DA  + ++MLE G + NVVTY+ LIDG   ++ MK A  ++ +M
Sbjct: 275 TYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+ SY+ LI G  K   M+ AL   +      + PD++ Y   I G C   + 
Sbjct: 335 VTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKI 394

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             A  + + M  NGI  + L+ +TL D   +S    E
Sbjct: 395 EAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTE 431



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A KLFG++   G+ P++ +YN +I G+     +D A++L  +L    ++P+ + +  
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I   C   +++ A ++ ++M E G KAN + Y+ L+D YFKS N      + EEM E +
Sbjct: 384 FIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD 443

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               +V++ +LIDGLCK  L+ +A+ Y    + D  L P+   Y  +I G CK  +   A
Sbjct: 444 HEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAA 503

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
             L++ M + G++PD    ++L D NL+
Sbjct: 504 TTLFEQMAQEGLVPDRTAYTSLMDGNLK 531



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K  ++D AL+L  +L  RG++PD++ Y T I G C L +++ A  +  ++    +K N
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKAN 412

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +T L+DA+ K G   +   +  +M E   +  VVT+  LIDG  K++ +  A D + 
Sbjct: 413 TLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFG 472

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M  +  + PN   Y+ +IDGLCK   ++ A   F       L+PD   Y  L+ G  K 
Sbjct: 473 RMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQ 532

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA+ L D M   G+  D L  ++L
Sbjct: 533 GNMLEALALRDKMAEIGMKLDLLAYTSL 560



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 99/190 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+K +  +   G  P+  TY +++   C +  L +A +L  ++  V ++ N +
Sbjct: 250 KEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVV 309

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  C   RM +A  +F KM+  G   N+ +Y+ LI G+ K++NM  A ++  E+
Sbjct: 310 TYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 369

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+++ Y   I GLC    +E A    +   +N +  + + Y  L+  Y K+G P
Sbjct: 370 KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNP 429

Query: 184 TEAMQLYDSM 193
           TE + L + M
Sbjct: 430 TEGLHLLEEM 439



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 105/205 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A + F ++    + P   + N ++  +  L + D   + F+ +     KP   T+ I
Sbjct: 79  LEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNI 138

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   KEG ++ A  +F +M  +G   + VTY+ +IDGY K   +      +EEM   +
Sbjct: 139 MIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y+ LI+  CK G + + L  +     + L P+VV+Y+ L+  +CK     +A+
Sbjct: 199 CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAI 258

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYN 212
           + Y  M R G +P+    ++L D N
Sbjct: 259 KFYVDMRRVGHVPNEFTYTSLVDAN 283



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 98/186 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +      L  L+EA Q F K+   ++ P + +   L+  F K G+ D     
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+  G K  V TY+ +ID  +K  ++++A  ++EEM    + P+ V+Y+ +IDG  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +++ +Y F         PDV+TY  LI  +CK+G+  + ++ Y  M ++G+ P+ + 
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 205 LSTLAD 210
            STL D
Sbjct: 241 YSTLVD 246



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 99/190 (52%), Gaps = 1/190 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTILI 69
            L L  ++ +   E  ++T+  +I G C    + +A+  F +++    L+PN+  +T +I
Sbjct: 432 GLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMI 491

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  CKE ++  AT +F +M ++G   +   Y+ L+DG  K  NM  A  + ++M E  + 
Sbjct: 492 DGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMK 551

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++++Y+ L+ G  +   +++A       +   +LPD V    +++ + + G   EA+ L
Sbjct: 552 LDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGL 611

Query: 190 YDSMLRNGIM 199
              ++++ ++
Sbjct: 612 QSYLMKHQLL 621


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 123/203 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A   F Q+   G++PD+++Y  +I GYC   ++DE+++L  ++  + L+P+
Sbjct: 410 LCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPD 469

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T++ L++ +CK GR+DDA  ++ +M  K  K N +TY+ ++ G F +  + +A + Y 
Sbjct: 470 NVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYM 529

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ ++ I   I +Y+I++ GLC+   ++EAL  F          +V T+ I+I G  K G
Sbjct: 530 KIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVG 589

Query: 182 RPTEAMQLYDSMLRNGIMPDGLL 204
           R  +A  L+ ++L +G++PD ++
Sbjct: 590 RIGDAKSLFSAILPSGLVPDAII 612



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 51/260 (19%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN----------------RLDE 45
           L KE  +D A  LF ++  +G  P+I+TYN++I G C                   +L+E
Sbjct: 149 LFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEE 208

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           AV+L +K++   L+P+ +T+++LID +CK GR  +A  +F  M+ +G   +  TY  L+ 
Sbjct: 209 AVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLH 268

Query: 106 G-----------------------------------YFKSQNMKSAFDVYEEMCENNISP 130
           G                                   Y K++ +  A   + EM +   SP
Sbjct: 269 GYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSP 328

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ +ID LCK G +E+A+  F   +   L PD++T+  LI G C  G   +  +L 
Sbjct: 329 NVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLS 388

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+  GI P+ + L+T+ D
Sbjct: 389 FEMINRGIHPNAIFLNTIMD 408



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 105/196 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+  F ++  +G  P+++TY T+I   C   R+++AV  F ++    L P+ ITFT 
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  G       +  +M+ +G   N +  + ++D   K   +  A D ++++    
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++VSY+ILIDG C  G M+E++      +   L PD VTY+ L+ GYCK GR  +A+
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490

Query: 188 QLYDSMLRNGIMPDGL 203
            LY  M    + P+ +
Sbjct: 491 ALYREMFSKDVKPNAI 506



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 109/198 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+   GL PDIIT+ ++I G C++    +  +L  ++    + P
Sbjct: 339 ILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHP 398

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I    ++D+ CKEGR+ +A   F +++  G K +VV+Y+ LIDGY     M  +  + 
Sbjct: 399 NAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLL 458

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+YS L++G CK G +++AL  +       + P+ +TY I++ G   A
Sbjct: 459 GRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHA 518

Query: 181 GRPTEAMQLYDSMLRNGI 198
           GR   A + Y  ++ +GI
Sbjct: 519 GRVVAAREFYMKIVDSGI 536



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 96/180 (53%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            +N +I  Y     LD+A+  F ++      PN +T+T +ID  CK GR++DA   FS+M
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + +G   +++T++ LI G       K    +  EM    I PN +  + ++D LCK G +
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F   +   + PDVV+Y ILI GYC  G+  E+++L   M+  G+ PD +  S L
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 109/190 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ++KL G++   GL PD +TY+ ++ GYC   R+D+A+ L+ ++    +KPN+IT+ I
Sbjct: 451 MDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNI 510

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++      GR+  A   + K+++ G +  + TY+ ++ G  ++  +  A  +++ +    
Sbjct: 511 ILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKE 570

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               + +++I+I GL K G + +A   F   L + L+PD + Y ++I+ + + G   E+ 
Sbjct: 571 FQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESD 630

Query: 188 QLYDSMLRNG 197
           +L+ SM +NG
Sbjct: 631 ELFLSMEKNG 640



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 36/237 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIIC----GYCSLNRLDEA---VQLFEKLTCV---Q 57
           L+ AL LF +L  R     +  +N ++     G  S ++   A   V LF  +  V   +
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSK--------MLEKGPK--ANVVTYSCLIDGY 107
           L  ++ TF ILI  FC  G +D A    S+        M + G     NV++Y+ +I+G 
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK----------------RGLMEEA 151
           FK   +  A+ ++ EM      PNIV+Y+ +IDGLCK                +G +EEA
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +          L PDVVTY++LI  YCK GR TEA  ++DSM+R G  PD     TL
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTL 266



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA + + ++ D G++  I TYN ++ G C  + +DEA+++F+ L   + +    TF I+I
Sbjct: 523 AAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMI 582

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
               K GR+ DA  +FS +L  G   + + Y  +I  + +   ++ + +++  M +N  +
Sbjct: 583 VGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCT 642

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            N  + + ++  L ++G +  A
Sbjct: 643 ANSRTLNAIVRKLLEKGDVRRA 664



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 4/180 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLKPN 61
           K   +D AL L+ ++  + ++P+ ITYN I+ G     R+  A + + K+  + +QL  N
Sbjct: 482 KNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGIN 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I++   C+   +D+A  MF  +  K  +  V T++ +I G  K   +  A  ++ 
Sbjct: 542 --TYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFS 599

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  + + P+ + Y ++I    + GL+EE+   F     N    +  T   ++R   + G
Sbjct: 600 AILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKG 659


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 111/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  LF  L ++   PD  TY+++I G  +   +DEA  L + +    L PN
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK G++  A  +F+K+  KG   N +TY+ LID Y K      AF + +
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  I P +++YSILI GLC +G MEEA+      ++N++ P+ +TY  LI GY K+G
Sbjct: 830 KMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              E  +LYD M   G++P
Sbjct: 890 NMEEISKLYDEMHIRGLLP 908



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++  ++ D G+  ++  YNT+I G C L R++E  ++ +++  V ++P+  ++ 
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +C+EG M  A  M   M+  G  A  +TY+ L+ G+     +  A  ++  M + 
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++PN +S S L+DGL K G  E+AL  +   L   L  +V+T+  +I G CK GR  EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L D M      PD L   TL D
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFD 542



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 2/214 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITFTILI 69
           A ++   L  +GL P+++TY  ++ GYC   R++EA ++ +++     +  + + + ++I
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMI 331

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + +C+ GRMDDAT + ++M + G   N+  Y+ +I+G  K   M+    V +EM +  + 
Sbjct: 332 NGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMR 391

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  SY+ LIDG C+ G M +A       + N L    +TY  L++G+C      +A++L
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRL 451

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  ML+ G+ P+ +  STL D  L  +G  E  +
Sbjct: 452 WFLMLKRGVAPNEISCSTLLD-GLFKAGKTEQAL 484



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL L+ +   RGL  ++IT+NT+I G C + R+ EA +L +++  ++  P+
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+  L D +CK G++  AT + +KM   G   +V  ++  I G+F ++      D++ 
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +SPN+V+Y  LI G CK G + EA   +   ++N + P+V   + L+  + K G
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  +   ++   ++P G  +ST+
Sbjct: 654 KVDEANLVLQKLVNIDMIP-GCSISTI 679



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 102/193 (52%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + +N II G C   R+ +A  LFE L   +  P++ T++ LI      G +D+A  +   
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ML  G   N++TY+ LI G  KS  +  A +++ ++    ISPN ++Y+ LID  CK G 
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
             EA       ++  + P V+TY+ILI G C  G   EA++L D M+ N + P+ +   T
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880

Query: 208 LADYNLQSSGSQE 220
           L    ++S   +E
Sbjct: 881 LIHGYIKSGNMEE 893



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++   K+  ++ D G+ PD  +YNT+I GYC    + +A ++   +    L   
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+  FC    +DDA  ++  ML++G   N ++ S L+DG FK+   + A ++++
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E     ++ N+++++ +I+GLCK G M EA        +    PD +TY  L  GYCK G
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A  L + M   G  P
Sbjct: 549 QLGTATHLMNKMEHLGFAP 567



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++GQ+   G+ PD  T   +   YC   R+ +AV+  E++  + L+ N + +  ++D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNIS 129
            +C  G  +DA  +   +  KG   NVVTY+ L+ GY K   M+ A  V +EM E  +I 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            + V+Y ++I+G C+RG M++A    +   D  +  ++  Y  +I G CK GR  E  ++
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              M   G+ PD    +TL D
Sbjct: 382 LQEMEDVGMRPDKYSYNTLID 402



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +  A ++   +   GL    +TYNT++ G+CSL+ +D+A++L+  +    + PN I
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           + + L+D   K G+ + A  ++ + L +G   NV+T++ +I+G  K   M  A ++ + M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALY----------------------------AF 155
            E    P+ ++Y  L DG CK G +  A +                             +
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 156 HCALDNH-------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           H   D H       L P++VTY  LI G+CK G   EA  LY  M+ NG+ P+  + S L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 27/246 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN-- 61
           KE +L  A  L+ ++ + G+ P++   + ++  +    ++DEA  + +KL  + + P   
Sbjct: 616 KEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCS 675

Query: 62  ------------------------SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
                                   ++ + ++I   CK GR+ DA  +F  +  K    + 
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TYS LI G   S ++  AF + + M    ++PNI++Y+ LI GLCK G +  A+  F+ 
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                + P+ +TY  LI  YCK G+ TEA +L   M+  GI P  +  S L  Y L + G
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI-YGLCTQG 854

Query: 218 SQEHCI 223
             E  I
Sbjct: 855 YMEEAI 860



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 27/243 (11%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A  L  ++   G  P +  +N+ I G+    +  +   +  +++   L PN +T+ 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +CKEG + +A  ++ +M+  G   NV   S L+  ++K   +  A  V +++   
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 127 NISPNI--------------------------VSYSILIDGLCKRGLMEEALYAFHCALD 160
           ++ P                            V ++++I GLCK G + +A   F    +
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN 728

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              LPD  TY+ LI G   +G   EA  L D ML  G+ P+ +  ++L  Y L  SG   
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI-YGLCKSGKLS 787

Query: 221 HCI 223
             +
Sbjct: 788 RAV 790



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 2/189 (1%)

Query: 11  ALKLFGQLTD--RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           A  LF  L +  R      ++++ ++  +    +L  A+ +F+ +  V  +P+  +   L
Sbjct: 130 AEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRL 189

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++   + G    A M++ +M   G   +  T + +   Y +   +  A +  EEM    +
Sbjct: 190 LNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGL 249

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             N+V+Y  ++D  C  G  E+A           L P+VVTY +L++GYCK GR  EA +
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 189 LYDSMLRNG 197
           +   M   G
Sbjct: 310 VVKEMKETG 318



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 36/61 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  + +++ A+KL  Q+ +  ++P+ ITY T+I GY     ++E  +L++++    L P 
Sbjct: 850 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909

Query: 62  S 62
           +
Sbjct: 910 N 910


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 116/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL LF Q+T +G++PD+ TYN +I G C+ +R  EA  L   +    + P+
Sbjct: 233 LCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ++   F K G +  A  +FS M+  G + +VVTY+ +I  +     MK A +V++
Sbjct: 293 VQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFD 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNIV+Y+ LI G C+   M +A+Y     ++N L P+VVT++ LI G CKAG
Sbjct: 353 LMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAG 412

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P  A +L+  M ++G +P+
Sbjct: 413 KPVAAKELFLVMHKHGQLPN 432



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 104/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H  AAL    ++ ++    D+  Y+ ++ G C    + EA+ LF ++T   ++P+
Sbjct: 198 LCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPD 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C   R  +A  + + M+ KG   +V T++ +   +FK+  +  A  ++ 
Sbjct: 258 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFS 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I  ++V+Y+ +I   C    M++A+  F   +    LP++VTY  LI G+C+  
Sbjct: 318 FMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETK 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +AM     M+ NG+ P+ +  STL
Sbjct: 378 NMNKAMYFLGEMVNNGLDPNVVTWSTL 404



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 6/212 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQ 57
           ++ K  H   A+ L   ++  G++P + T N +I   C   RL  AV  F  L     + 
Sbjct: 92  IVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLC---RLSHAVFGFSVLGLMFKIG 148

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           ++P+ +TF  +++  C EG +  A      + + G +++  T   + +G  K  +  +A 
Sbjct: 149 VEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAAL 208

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
              ++M E N + ++ +YS ++DGLCK G++ EAL  F       + PD+ TY  LI G 
Sbjct: 209 SYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGL 268

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           C   R  EA  L  +M+R GIMPD    + +A
Sbjct: 269 CNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 300



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K   +  A  +F  +   G+E D++TY +II  +C LN++ +A+++F+ +      PN
Sbjct: 303 FFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPN 362

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI  +C+   M+ A     +M+  G   NVVT+S LI G  K+    +A +++ 
Sbjct: 363 IVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFL 422

Query: 122 EMCENNISPNIVSYSILIDGL-----------------------------------CKRG 146
            M ++   PN+ + +I++DGL                                   C  G
Sbjct: 423 VMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSG 482

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            + +AL  F       +  DVVTY I+I+G CK G   +A  L   M  NG  P+
Sbjct: 483 KLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPN 537



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  H      + G +   G+EP I+T+NTI+ G C    + +A++  + L  +  + +
Sbjct: 128 LCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESD 187

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T   + +  CK G    A     KM EK    +V  YS ++DG  K   +  A +++ 
Sbjct: 188 SYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFS 247

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I P++ +Y+ LI GLC     +EA       +   ++PDV T+ ++   + K G
Sbjct: 248 QMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTG 307

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             + A  ++  M+  GI  D
Sbjct: 308 MISRAKSIFSFMVHMGIEHD 327



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 36/219 (16%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A+   G++ + GL+P+++T++T+I G C   +   A +LF  +      PN  T  
Sbjct: 378 NMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCA 437

Query: 67  ILIDAF-----------------------------------CKEGRMDDATMMFSKMLEK 91
           I++D                                     C  G+++DA  +FS +  K
Sbjct: 438 IILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSK 497

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K +VVTY+ +I G  K   +  A D+  +M EN   PN  +Y++ + GL +R  + ++
Sbjct: 498 GVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKS 557

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
                   D     D  T   LI  Y  A +   A++++
Sbjct: 558 TKYLMFMKDKGFQADATTTKFLIN-YFSANKENRALEVF 595


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 126/210 (60%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ KE  +  A  +   +T+ G+EPD+ TYNT++ GYC    + EA ++FE +      P
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  +F+IL++ +CK  R+D+A  +F +M  +G   + V+Y+ LI G  +++    A +++
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M  N   PN+V+YSIL+D L K+G +++A+  F    ++ L PD+VTY I+I G CK 
Sbjct: 430 KDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKY 489

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  +A +L+  +   G+ P+  + +   D
Sbjct: 490 GKFKDARELFAELSVKGLQPNNWVCTPTID 519



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A+ +F ++   G+ P ++TY ++I G  +L R  EA  L  ++    + P+
Sbjct: 241 LCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F++LID  CKEG + +A ++   M E G + +V TY+ L++GY     +  A  V+E
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFE 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ S+SIL++G CK   ++EA   F       L+PD V+Y  LI G C+A 
Sbjct: 361 VMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQAR 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP EA +L+  M  NG  P+ +  S L D
Sbjct: 421 RPLEAEELFKDMHSNGYPPNLVTYSILLD 449



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 111/206 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A++LF  +  RG +P++ +Y+ II G C + +  E ++L E +  V  +P+ + 
Sbjct: 174 EGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVI 233

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++D  CK+  +++A  +F KM   G    VVTY+ LI G       K AF +  EM 
Sbjct: 234 YNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMK 293

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             NI P++V++S+LID +CK G + EA        +  + PDV TY  L+ GYC      
Sbjct: 294 GGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVV 353

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA ++++ M+  G MPD    S L +
Sbjct: 354 EARKVFEVMISKGRMPDVFSFSILVN 379



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 106/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            +KL   +   G EPD++ YNTI+   C    ++EAV +F K+    + P  +T+T LI 
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
                GR  +A  + ++M       ++V +S LID   K   +  A  + + M E  + P
Sbjct: 275 GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP 334

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ L++G C R  + EA   F   +    +PDV +++IL+ GYCKA R  EA QL+
Sbjct: 335 DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLF 394

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M   G++PD +  +TL
Sbjct: 395 DEMTHRGLIPDTVSYNTL 412



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  H    + L  Q+   G+  D+++   +I  +C L  +D    +  K+  + L+PN
Sbjct: 101 LVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPN 160

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF+ LI+ FC EG++  A  +F  M+ +G K NV +YS +I G  +         + E
Sbjct: 161 VITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLE 220

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V Y+ ++D LCK  L+ EA++ F       +LP VVTY  LI G    G
Sbjct: 221 HMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLG 280

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L + M    IMPD +  S L D
Sbjct: 281 RWKEAFGLLNEMKGGNIMPDLVAFSVLID 309



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 89/153 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +LF ++T RGL PD ++YNT+I G C   R  EA +LF+ +      PN +
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLV 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++IL+D   K+G +D A  +F  M   G K ++VTY+ +IDG  K    K A +++ E+
Sbjct: 443 TYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
               + PN    +  IDG+CK GL++EA  AF 
Sbjct: 503 SVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFR 535



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 86/172 (50%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           +   +++A+  F  +      P+ + F  L  A  +         +  +M   G   +V+
Sbjct: 68  TFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVL 127

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           + + LI+ + +  ++   F V  ++ +  + PN++++S LI+G C  G +  A+  F   
Sbjct: 128 SLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVM 187

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +     P+V +Y+I+I+G C+ G+ TE ++L + M   G  PD ++ +T+ D
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVD 239



 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +LD A+ LF  + + GL+PD++TYN +I G C   +  +A +LF +L+   L+PN
Sbjct: 451 LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM 88
           +   T  ID  CK G +D+A   F +M
Sbjct: 511 NWVCTPTIDGVCKGGLLDEAHKAFRQM 537


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A++    M++  I  D +  + L
Sbjct: 326 DLETALEYRKRMIKENIRLDDVAYTAL 352



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+  A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E AL      +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+  A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++A +  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGYVP 414



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 101/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +  A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 74/133 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A++  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 120/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  AL +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 152 KEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 211

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LIDG+ K+  +  A +VY++M
Sbjct: 212 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM 271

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A           L PD ++Y  LI G CK G  
Sbjct: 272 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDL 331

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 332 ETAFEHRKRMIQENIRLDDVAYTAL 356



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 186 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNG 245

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 246 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 305

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ +SY+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 306 MRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 365

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 366 SIDAEKMLREMLSVGLRPD 384



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 220 LCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + ++Y+ LIDG  K  ++++AF+  +
Sbjct: 280 LITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRK 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 340 RMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKG 399

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                 +L   M R+G +P      ++  YN+  +G
Sbjct: 400 DVWTGSKLLKEMQRDGHVP------SVVTYNVLMNG 429



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A+ +F+ +T   L+P+
Sbjct: 115 LMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPS 174

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 175 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 234

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 235 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKG 294

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 295 DLKQAQDLIDEMRMKGLKPDKISYTTLID 323



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  Y+E+ 
Sbjct: 73  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEIL 132

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----------NHLL---------- 164
           E     ++  ++IL+   CK G +  AL  F               N L+          
Sbjct: 133 ECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 192

Query: 165 ---------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  +A +L+D ML  G++P+G+  +TL 
Sbjct: 193 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 252

Query: 210 D 210
           D
Sbjct: 253 D 253


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 123/220 (55%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  +  ++ + G  PD ++YN II   C  NR+ EA +L ++    +  P 
Sbjct: 270 LCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPG 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVY 120
               T+L+D  CK  R+++A ++  +MLE G +A +VVTYS +IDG  K+  +  A+ V 
Sbjct: 330 VPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVL 389

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M      P++V+Y+ +ID  CK G ++EA   F    +     DVV Y ILIRGYC+A
Sbjct: 390 QKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRA 449

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +  EA+ + + M   GI P+ + LST+ D   + S  +E
Sbjct: 450 AKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEE 489



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 2/193 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F Q+ D  ++PD   Y  +I   C +N+LD A   FE++      P+ +T+T+L
Sbjct: 104 DKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVL 163

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + +  K  + +    +F +ML KG    +VTY+ +++GY K+  +  A  +   +     
Sbjct: 164 VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP+   YS LIDGLCK    +EA   F  A  +  + DV+ Y   I G CKAG+  EA  
Sbjct: 224 SPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKA 281

Query: 189 LYDSMLRNGIMPD 201
           ++  M+  G  PD
Sbjct: 282 VHVKMIEAGCAPD 294



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 2/196 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C  +   ++F ++  +G  P+++TY T++ GYC   R+D+A+ L  +L      P+
Sbjct: 167 LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPS 226

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++ LID  CK  R D+A  +F   +  G   +V+ Y+  I G  K+  +  A  V+ 
Sbjct: 227 GSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHV 284

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E   +P+ VSY+++I  LCK   + EA      A++   +P V    +L+ G CK+ 
Sbjct: 285 KMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSR 344

Query: 182 RPTEAMQLYDSMLRNG 197
           R  EA  + + ML  G
Sbjct: 345 RVEEACVILERMLETG 360



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 81/127 (63%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P ++TY+ +I G C  +RLD+A  + +K+      P+ +T+T +IDAFCK GR+D+A  +
Sbjct: 364 PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL 423

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M E+G   +VV Y+ LI GY ++  +  A  + EEM    I PN+VS S ++DGLCK
Sbjct: 424 FQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCK 483

Query: 145 RGLMEEA 151
              +EEA
Sbjct: 484 ESRVEEA 490



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 1/205 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           CH +A  ++F         PD  TY T+I G+C   ++ +AV L  ++    + P  +TF
Sbjct: 32  CHREA-YRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTF 90

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             LI   C+    D A  +F +M++   K +   Y+ +I    K   +  A   +E M +
Sbjct: 91  GSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQ 150

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +   P+ V+Y++L+  L K    E+    F   L     P++VTYA ++ GYCKAGR  +
Sbjct: 151 SGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQ 210

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+ L   +   G  P G L STL D
Sbjct: 211 ALSLMRRLKGTGRSPSGSLYSTLID 235



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 1/193 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-LTCVQLKP 60
           L K+  +  A +L  Q  +R   P +     ++ G C   R++EA  + E+ L      P
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T++ +ID  CK  R+DDA ++  KM   G   +VVTY+ +ID + K   +  A +++
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M E   + ++V+Y+ILI G C+   ++EA+          + P+VV+ + ++ G CK 
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484

Query: 181 GRPTEAMQLYDSM 193
            R  EA  L + M
Sbjct: 485 SRVEEARLLMEKM 497



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T   L++ F  +G   +A  +F   L    + +  TY  LI G+ K++ +  A ++ 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    I+P IV++  LI  LC+    ++AL  FH  +D  + PD   Y ++I   CK 
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +   A   ++ M+++G +PD +  + L
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVL 163


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 11/211 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  RG+ P  ITY+++I G+C  NRLD A  +F  +      P+
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPD 360

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LI  +C+  R+DD   +  +M E G  AN +TY+ LI G+ +  ++ +A D+ +
Sbjct: 361 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 420

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC----ALD-------NHLLPDVVTY 170
           EM  + + PN+V+ + L+DGLC  G +++AL  F       +D       N + PDV TY
Sbjct: 421 EMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTY 480

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            ILI G    G+  EA +LY+ M   GI+PD
Sbjct: 481 NILISGLINEGKFLEAEELYEEMPHRGIVPD 511



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 11/210 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL  FG++T  G  P ++T++T++ G C  +R+ EA+ LF ++     KPN +TFT 
Sbjct: 129 LPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTT 184

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-N 126
           L++  C+EGR+ +A  +  +MLE G + N +TY  ++DG  K  +  SA ++  +M E +
Sbjct: 185 LMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 244

Query: 127 NISPNIVSYSI-----LIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKA 180
           +I PN+V + +     +I+G C  G   EA       L+   + PDVVTY  LI  + K 
Sbjct: 245 HIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKE 304

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  EA +LYD ML  GI+P  +  S++ D
Sbjct: 305 GKFFEAEELYDEMLPRGIIPSTITYSSMID 334



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 46/251 (18%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LDAA  +F  +  +G  PDIIT+NT+I GYC   R+D+ ++L  ++T   L  N+I
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD----- 118
           T+T LI  FC+ G ++ A  +  +M+  G   NVVT + L+DG   +  +K A +     
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457

Query: 119 -----------------------------------------VYEEMCENNISPNIVSYSI 137
                                                    +YEEM    I P+ ++Y+ 
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +I GLCK+  ++EA   F         P+VVT+  LI GYCKAGR  + ++L+  M R G
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577

Query: 198 IMPDGLLLSTL 208
           I+ + +   TL
Sbjct: 578 IVANAITYITL 588



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITYN++I G C  +RLDEA Q+F+ +      PN
Sbjct: 487 LINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPN 546

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LI+ +CK GR+DD   +F +M  +G  AN +TY  LI G+ K  N+  A D+++
Sbjct: 547 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQ 606

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  ++ A+
Sbjct: 607 EMMASGVYPDTITIRNMLTGLWSKEELKRAV 637



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 42/251 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTI---------------------------- 33
           L +E  +  A+ L  ++ + GL+P+ ITY TI                            
Sbjct: 189 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKP 248

Query: 34  -------------ICGYCSLNRLDEAVQLF-EKLTCVQLKPNSITFTILIDAFCKEGRMD 79
                        I G+CS  R  EA QL  E L   ++ P+ +T+  LI+AF KEG+  
Sbjct: 249 NVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFF 308

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A  ++ +ML +G   + +TYS +IDG+ K   + +A  ++  M     SP+I++++ LI
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            G C+   +++ +   H   +  L+ + +TY  LI G+C+ G    A  L   M+ +G+ 
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 200 PDGLLLSTLAD 210
           P+ +  +TL D
Sbjct: 429 PNVVTCNTLLD 439



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 113/212 (53%), Gaps = 11/212 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--------- 58
           L+AA  L  ++   G+ P+++T NT++ G C   +L +A+++F+ +   ++         
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471

Query: 59  --KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
             +P+  T+ ILI     EG+  +A  ++ +M  +G   + +TY+ +I G  K   +  A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +++ M   + SPN+V+++ LI+G CK G +++ L  F       ++ + +TY  LI G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + K G    A+ ++  M+ +G+ PD + +  +
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNM 623



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 87/155 (56%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +I G  +  +  EA +L+E++    + P++IT+  +I   CK+ R+D+A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    NVVT++ LI+GY K+  +    +++ EM    I  N ++Y  LI G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K G +  AL  F   + + + PD +T   ++ G
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTG 626



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LFG +      P +I +  ++     + RLD  + L  K+   ++  N+ +FTI
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  FC   ++  A   F K+ + G    VVT+S L+ G      +  A D++ +MC+  
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-- 176

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      L++ L P+ +TY  ++ G CK G    A+
Sbjct: 177 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 188 QLYDSM 193
            L   M
Sbjct: 235 NLLRKM 240



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 4/175 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ I F  L+    + GR+D    +  KM  +    
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           N  +++ L+  +     +  A   + ++ +    P +V++S L+ GLC    + EAL  F
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        P+VVT+  L+ G C+ GR  EA+ L D ML +G+ P+ +   T+ D
Sbjct: 172 H----QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   P+++T+ T+I GYC   R+D+ ++LF ++    +  N
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++ G +  + +K A  + E
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLE 641

Query: 122 EM 123
           ++
Sbjct: 642 DL 643


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 112/193 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+      + L   L +RG   +   Y+T+I G     + +EA+ L++K+     +PN
Sbjct: 338 LVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPN 397

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LID  C+EG++D+A  +  +M+ KG   N  TYS LI G+FK+ N + A  V++
Sbjct: 398 IVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK 457

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +NN  PN + YS+LI GLC+ G + EA+  +   L   L PDVV Y+ +I G C AG
Sbjct: 458 EMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 517

Query: 182 RPTEAMQLYDSML 194
                ++L++ ML
Sbjct: 518 SVEVGLKLFNEML 530



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KL   +  +G  P+ +TYNTII G C   +LD+AV L +++   +  PN
Sbjct: 268 LCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K+GR  D   + S + E+G  AN   YS LI G FK +  + A  +++
Sbjct: 328 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    PNIV YS LIDGLC+ G ++EA       ++    P+  TY+ LI+G+ K G
Sbjct: 388 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A++++  M +N  +P+ +  S L
Sbjct: 448 NSQKAIRVWKEMAKNNCVPNEICYSVL 474



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++F ++  +  EPD+ TY T++ G C  +R+DEAV L +++      P+S+TF +
Sbjct: 204 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 263

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  CK+G M   T +   M  KG   N VTY+ +I+G      +  A  + + M  + 
Sbjct: 264 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 323

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V+Y  LI+GL K+G   + ++      +     +   Y+ LI G  K  +  EAM
Sbjct: 324 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 383

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  M+  G  P+ ++ S L D
Sbjct: 384 GLWKKMVEKGCQPNIVVYSALID 406



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 116/222 (52%), Gaps = 2/222 (0%)

Query: 1   MLIKECHLDAALKLF--GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           ++I+E     AL+ +  G      + P+++++N +I   C L  +D A+++F ++   + 
Sbjct: 160 VIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKC 219

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  T+  L+D  CKE R+D+A ++  +M  +G   + VT++ LI+G  K  +M     
Sbjct: 220 EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 279

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + + M      PN V+Y+ +I+GLC +G +++A+      + +  +P+ VTY  LI G  
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           K GR  + + L  S+   G   +    STL     +   S+E
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 381



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 110/196 (56%), Gaps = 3/196 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD A ++  ++ ++G  P+  TY+++I G+       +A+++++++      PN
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +++LI   C++G++ +A MM++ ML +G + +VV YS +I G   + +++    ++ 
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 527

Query: 122 EMC--ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC- 178
           EM   E++  P++V+Y+IL+  LCK+  +  A+   +  LD    PD++T  I +     
Sbjct: 528 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 587

Query: 179 KAGRPTEAMQLYDSML 194
           K   P +  +  D ++
Sbjct: 588 KLNPPQDGREFLDELV 603



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T+ ++I  Y +        Q+F+++   +       F ++  A+ K    + A  +F +M
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 89  LEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC----ENNISPNIVSYSILIDGLC 143
           +++   +  V +++ +++   +      A + YE  C    + NISPN++S++++I  +C
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE--CGVGGKTNISPNVLSFNLVIKAMC 199

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K GL++ A+  F         PDV TY  L+ G CK  R  EA+ L D M   G  P  +
Sbjct: 200 KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV 259

Query: 204 LLSTLAD 210
             + L +
Sbjct: 260 TFNVLIN 266



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 23/166 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LK 59
           L ++  L  A+ ++  +  RGL PD++ Y+++I G C+   ++  ++LF ++ C +   +
Sbjct: 478 LCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ 537

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG------------- 106
           P+ +T+ IL+ A CK+  +  A  + + ML++G   +++T +  ++              
Sbjct: 538 PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGRE 597

Query: 107 --------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                     K Q +  A  + E M +  + PN  ++  +I  LCK
Sbjct: 598 FLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643



 Score = 43.5 bits (101), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K    TF  LI+ +   G       +F +M  +        +  +   Y K+   + A +
Sbjct: 77  KSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIE 136

Query: 119 VYEEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIR 175
           ++  M  E      + S++ +++ + + GL   AL  + C +    ++ P+V+++ ++I+
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 196

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             CK G    A++++  M      PD     TL D
Sbjct: 197 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMD 231


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 122/214 (57%), Gaps = 6/214 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D   K+F  +  +GL+PD+ +Y+  I GYC + ++DEA++LF++++   + PN++T+  
Sbjct: 161 IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNT 220

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C+  R  DA ++F KM   G   +++ YS L+DG+ K  N+     +++EM    
Sbjct: 221 LIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRL 280

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V Y+I+I+G+C+   +++A       +   L PDV TY  L+ G C+ G   EA+
Sbjct: 281 VKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEAL 340

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +L+  M  +G MP          YN+   G  +H
Sbjct: 341 RLFRKMEEDGCMPGS------CSYNVLLQGCLQH 368



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 106/195 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D    +FG+   RG +PD++ + T+I G C + + + A  L +++  V   P+ +T  
Sbjct: 90  HVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCN 149

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  +C +G++D    +F  M+ KG K +V +YS  I+GY K + +  A ++++EM   
Sbjct: 150 SLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHR 209

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN V+Y+ LI  LC+     +A   F       L PD++ Y+ L+ G+CK G   E 
Sbjct: 210 GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEM 269

Query: 187 MQLYDSMLRNGIMPD 201
           + L+  M R  + PD
Sbjct: 270 LVLFQEMQRRLVKPD 284



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 111/189 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PD++T N+++ GYCS  ++D+  ++F  +    LKP+  +++I I+ +CK  ++D+A
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M  +G   N VTY+ LI    ++   + A  ++ +MC   +SP+I++YS L+DG
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK+G ++E L  F       + PD+V Y I+I G C++ +  +A ++   ++  G+ PD
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319

Query: 202 GLLLSTLAD 210
               + L D
Sbjct: 320 VHTYTALVD 328



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 116/204 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++LF +++ RG+ P+ +TYNT+I   C   R  +A  LF K+    L P+ + ++ 
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYST 255

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCK+G +D+  ++F +M  +  K ++V Y+ +I+G  +S+ +K A +V   +    
Sbjct: 256 LLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEG 315

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+ L+DGLC+ G + EAL  F    ++  +P   +Y +L++G  +    +  +
Sbjct: 316 LKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVV 375

Query: 188 QLYDSMLRNGIMPDGLLLSTLADY 211
           QL   M   G   D +  + L D+
Sbjct: 376 QLIHEMADRGFYADAVTRTFLKDF 399



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 113/202 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD AL  F ++ DR  +P II +N ++     + + +  V LF+++    +K N  T +
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+ FC    +D    +F K L++G K +VV ++ LIDG  +    + A  + +EM   
Sbjct: 80  ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+ + L+ G C +G +++    FH  +   L PDV +Y+I I GYCK  +  EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M+L+D M   G++P+ +  +TL
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTL 221



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 105/202 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +  + LF ++  RG++ ++ T + +I  +C L+ +D    +F K      KP+ + FT L
Sbjct: 57  ETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTL 116

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  C+ G+ + A  +  +M   G   +VVT + L+ GY     +     ++  M    +
Sbjct: 117 IDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGL 176

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ SYSI I+G CK   ++EA+  F       ++P+ VTY  LI+  C+A RP +A  
Sbjct: 177 KPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQV 236

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L+  M   G+ PD L  STL D
Sbjct: 237 LFRKMCACGLSPDILAYSTLLD 258



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +LD  L LF ++  R ++PD++ Y  II G C   ++ +A ++  +L    LKP+  
Sbjct: 262 KQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVH 321

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D  C+EG + +A  +F KM E G      +Y+ L+ G  +  +  +   +  EM
Sbjct: 322 TYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEM 381

Query: 124 CENNISPNIVSYSILIDGL 142
            +     + V+ + L D L
Sbjct: 382 ADRGFYADAVTRTFLKDFL 400


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  AL L  ++ + G +PD +TY TI+ G C L     A+ +  K+   Q+K N
Sbjct: 20  LCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKAN 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ ++D  CK+G    A  +F++M EKG   NV+TY+C+IDGY        A  +  
Sbjct: 80  VVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLR 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E NI P++V++S LI+   K G +  A   +   L  ++ P  +TY+ +I G+CK  
Sbjct: 140 DMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHS 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A  ++D M+  G  PD + L+TL D
Sbjct: 200 RLEDAKHMFDLMVSKGCSPDIITLNTLID 228



 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 120/202 (59%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  LF ++   G+ PDI+T NT++ G C   +L++A+++F+     ++  ++ T  
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN 305

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I+  CK  ++D+A  +F+ +   G + +VVTY+ LI  + K  N   A D+Y EM   
Sbjct: 306 IIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK 365

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+ V+Y+ ++DG CK+  +EEA       +     PDVVT++ LI+GYCKAGR  + 
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDG 425

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           ++L+  M + G++ D +  + L
Sbjct: 426 LELFSEMCQRGLVADTITYNAL 447



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 109/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL++F       ++ D  T N II G C  N++DEA  LF  L    ++ + +T+ I
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F KEG    A  ++ +ML KG   + VTY+ ++DG+ K   ++ A  + + M    
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++V++S LI G CK G +++ L  F       L+ D +TY  LI G+CK G    A 
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +++ M+ +G+ PD +   ++
Sbjct: 462 DIFEEMVSSGVCPDTITFRSM 482



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 46/237 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++ ++G+ P+++TYN +I GYCS  +  +A QL   +    + P+ +TF+ LI+
Sbjct: 99  AQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALIN 158

Query: 71  AFCKEG-----------------------------------RMDDATMMFSKMLEKGPKA 95
           AF KEG                                   R++DA  MF  M+ KG   
Sbjct: 159 AFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSP 218

Query: 96  NVVTYSCLIDGYFKSQ-----------NMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           +++T + LIDG  +++           N+  A D+++EM  N +SP+IV+ + L+ GLC+
Sbjct: 219 DIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCE 278

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G +E+AL  F     + +  D  T  I+I G CK  +  EA  L++S+  NG+  D
Sbjct: 279 NGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETD 335



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 107/193 (55%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G   +++T+ T++ G C   R+ +A+ L +++     +P+++T+  +++  CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              A  M  KM E   KANVV YS ++D   K  N   A +++ EM E  I PN+++Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +IDG C  G   +A       ++ ++ PDVVT++ LI  + K G+ + A +LY  MLR  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 198 IMPDGLLLSTLAD 210
           I P  +  S++ D
Sbjct: 181 IFPTTITYSSMID 193



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 95/152 (62%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +KE +   A  ++ ++  +G+ P  +TYN+++ G+C  NRL+EA Q+ + +      P
Sbjct: 345 VFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSP 404

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF+ LI  +CK GR+DD   +FS+M ++G  A+ +TY+ LI G+ K  ++  A D++
Sbjct: 405 DVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIF 464

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EEM  + + P+ +++  ++ GLC +  +++ L
Sbjct: 465 EEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 102/189 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  LF  L   G+E D++TYN +I  +        A  ++ ++ C  + P+++T+  
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D FCK+ R+++A  M   M+ +G   +VVT+S LI GY K+  +    +++ EMC+  
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  + ++Y+ LI G CK G +  A   F   + + + PD +T+  ++ G C      + +
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496

Query: 188 QLYDSMLRN 196
            + + + ++
Sbjct: 497 TMLEDLQKS 505



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 46/246 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   + +R ++PD++T++ +I  +    ++  A +L+ ++    + P +IT++ +ID
Sbjct: 134 AEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMID 193

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ-----------NMKSAFDV 119
            FCK  R++DA  MF  M+ KG   +++T + LIDG  +++           N+  A D+
Sbjct: 194 GFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDL 253

Query: 120 YEEMCENNISPNIVSYS-----------------------------------ILIDGLCK 144
           ++EM  N +SP+IV+ +                                   I+I+G+CK
Sbjct: 254 FQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCK 313

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              ++EA   F+    N +  DVVTY ILI  + K G    A  +Y  ML  GI+P  + 
Sbjct: 314 GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVT 373

Query: 205 LSTLAD 210
            +++ D
Sbjct: 374 YNSMVD 379



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 66/120 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A ++   +   G  PD++T++T+I GYC   R+D+ ++LF ++    L  ++I
Sbjct: 383 KQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTI 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FCK G ++ A  +F +M+  G   + +T+  ++ G      ++    + E++
Sbjct: 443 TYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 117/208 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A + F ++   G+ P++  Y  +I G+C    + EA  +F  +   ++  +  
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 601

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI    + G+M +A  +FS++ EKG   N  TY+ LI G  K  N+  A  + EEM
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C   I+P+IV+Y+ILIDGLCK G +E A   F       L P+ VTYA ++ GYCK+  P
Sbjct: 662 CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 721

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           T A QL + ML  G+ PD  + + + ++
Sbjct: 722 TAAFQLLEEMLLRGVPPDAFIYNVILNF 749



 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A  +F +L ++GL P+  TYN++I G C    +D+A QL E++    + P+
Sbjct: 610 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILID  CK G ++ A  +F  +  +G   N VTY+ ++DGY KS+N  +AF + E
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+   Y+++++  CK    E+AL  F   L+       V++  LI GYCK+G
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSG 788

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +  EA  L + M+    +P+ +  ++L D+N ++ 
Sbjct: 789 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAG 823



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 114/198 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++  ++ ++G  P+++TYN II G C    LDEA++L   +    L P+  T+ ILI+
Sbjct: 234 AKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC E R  +A +M  +M++ G K   +TY+ LIDG+ +  +++ AF + +EM    I  
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 353

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N++ ++ L++G+CK G ME+AL      ++  + PD  TY++LI G+C+      A +L 
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 413

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M +  + P  L  S +
Sbjct: 414 DEMKKRKLAPTVLTYSVI 431



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ +  +  ++ ++G+ PD+  YN++I G+C   R++EA     ++   +L+PN+ 
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   ID + K G M+ A   F++ML  G   NV  Y+ LI+G+ K  N+  AF V+  +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  ++ +YS+LI GL + G M EA   F    +  LLP+  TY  LI G CK G  
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A QL + M   GI PD +  + L D
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILID 678



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++L   + D+GL PD+ TY+ +I G+C   R  EA  +  ++  V LKP  IT+  
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325

Query: 68  LIDAF-----------------------------------CKEGRMDDATMMFSKMLEKG 92
           LID F                                   CK G+M+ A  +  +M+EKG
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            + +  TYS LI+G+ + QNM  AF++ +EM +  ++P +++YS++I+GLC+ G ++   
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 + N L P+ V Y  L+  + K GR  E+  + + M   GI+PD
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 494



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF  +  RGL P+ +TY  ++ GYC       A QL E++    + P+
Sbjct: 680 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  + ++++  CKE + + A  +F +MLEKG  A+ V+++ LI+GY KS  ++ A  + E
Sbjct: 740 AFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLE 798

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    PN V+Y+ LID  CK G+M EA   +    + +++P   TY  L+ GY   G
Sbjct: 799 EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 858

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             +E   L++ M+  GI PD +    + D   +     E C
Sbjct: 859 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 105/195 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A +L  ++  R L P ++TY+ II G C    L     +  ++    LKPN++ +T
Sbjct: 405 NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 464

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+ A  KEGR++++ M+  +M E+G   +V  Y+ LI G+ K++ M+ A     EM E 
Sbjct: 465 TLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER 524

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN  +Y   IDG  K G ME A   F+  L   +LP+V  Y  LI G+CK G  TEA
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584

Query: 187 MQLYDSMLRNGIMPD 201
             ++  +L   ++ D
Sbjct: 585 FSVFRFILSRRVLQD 599



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L     +  ++   GL+P+ + Y T++  +    R++E+  + E++    + P+   + 
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FCK  RM++A     +MLE+  + N  TY   IDGY K+  M+ A   + EM   
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+  Y+ LI+G CK G + EA   F   L   +L DV TY++LI G  + G+  EA
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             ++  +   G++P+    ++L
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSL 641



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 106/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL++  ++ ++G+EPD  TY+ +I G+C    +  A +L +++   +L P  +
Sbjct: 367 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 426

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++++I+  C+ G +     +  +M+  G K N V Y+ L+  + K   ++ +  + E M
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++  Y+ LI G CK   MEEA       L+  L P+  TY   I GY KAG  
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A + ++ ML  G++P+
Sbjct: 547 EIADRYFNEMLSCGVLPN 564



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 11/199 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE   + AL LF ++ ++G     +++NT+I GYC   +L EA  L E++   Q  PN +
Sbjct: 752 KEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CK G M +A  ++ +M E+       TY+ L+ GY    NM     ++EEM
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-----DVVTYAILIRGYC 178
               I P+ ++Y ++ID  C+ G + EA     C L + +L       V  Y  LI+  C
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEA-----CKLKDEILVKGMPMSVAAYDALIQALC 925

Query: 179 KAGRPTEAMQLYDSMLRNG 197
           K     E ++L + +  +G
Sbjct: 926 KKEEFFEVLKLLNEIGESG 944



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 2/191 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L  ++  RG+ PD   YN I+   C   + ++A+ LF+++       ++++F  LI
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLI 781

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + +CK G++ +A  +  +M+EK    N VTY+ LID   K+  M  A  ++ EM E N+ 
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   +Y+ L+ G    G M E    F   +   + PD +TY ++I  YC+ G   EA +L
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 901

Query: 190 YDSMLRNGIMP 200
            D +L  G MP
Sbjct: 902 KDEILVKG-MP 911



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 97/186 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ + ++ ++  Y  +  L EAV +F      + +P+ ++   L+    K  +++    +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M       +V TY+ +I  + K  N+K A  V  EM E   SPN+V+Y+++I GLC+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
             L++EA+      +D  L+PD+ TY ILI G+C   R  EA  +   M+  G+ P+ + 
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 205 LSTLAD 210
            + L D
Sbjct: 323 YNALID 328



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 100/186 (53%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
             P +++ N+++      N+++   ++F+ +   ++ P+  T+T +I A CK G + DA 
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  +M EKG   N+VTY+ +I G  +++ +  A ++   M +  + P++ +Y ILI+G 
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C      EA       +D  L P+ +TY  LI G+ + G   +A ++ D M+  GI  + 
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355

Query: 203 LLLSTL 208
           ++ +TL
Sbjct: 356 IIWNTL 361



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 84/173 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A +L+ ++ +R + P   TY +++ GY ++  + E   LFE++    ++P+ +
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ++IDA+C+EG + +A  +  ++L KG   +V  Y  LI    K +       +  E+
Sbjct: 881 TYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            E+     + + S++  G    G M+EA       +    + +  +   L+ G
Sbjct: 941 GESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 35/145 (24%)

Query: 14   LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            LF ++  +G+EPD +TY  +I  YC    + EA +L +++    +  +   +  LI A C
Sbjct: 866  LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925

Query: 74   KE-----------------------------------GRMDDATMMFSKMLEKGPKANVV 98
            K+                                   G MD+A  +   M++ G  +N  
Sbjct: 926  KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 985

Query: 99   TYSCLIDGYFKSQNMKSAFDVYEEM 123
            +   L+DG     N + + ++ ++M
Sbjct: 986  SLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 114/197 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA+++F  +  RGL P+ + Y+ +I G C   ++D A+++  ++      P+
Sbjct: 315 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 374

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+ ILID  CK G ++ A   F +MLE G K +V TY+ L+ G+ K+ N  +A  V++
Sbjct: 375 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFD 434

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  ++ SPN+V+Y  LI GLCKR  + +A   F    +    PD   Y+ L+ G CK+G
Sbjct: 435 DMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494

Query: 182 RPTEAMQLYDSMLRNGI 198
           +      L+D M R+G+
Sbjct: 495 KLEGGCMLFDEMERSGV 511



 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A  ++  +T +G  PD++T +T+I G C   R+  AV++F+ +    L PN
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LI   CK  +MD A  M ++M +     + +TY+ LIDG  KS ++++A   ++
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++ +Y+IL+ G CK G  + A   F     +H  P+VVTY  LI G CK  
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + T+A   +  M   G  PD  + S+L D  L  SG  E
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVD-GLCKSGKLE 497



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A KLF ++  RGL  D + Y  +I G     ++ +A  +++ +T     P+
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + +ID  CK GR+  A  +F  M  +G   N V YS LI G  K++ M  A ++  
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +   +P+ ++Y+ILIDGLCK G +E A   F   L+    PDV TY IL+ G+CKAG
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  ++D M  +   P+ +   TL
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTL 451



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 1/220 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K   +  A+ L  ++T  G  P I TYN ++ G C + RL+EA+ L  K+      P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T LID   KE R  +A  +F +M  +G   + V Y+ LI G  ++  +  A  VY
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M      P++V+ S +IDGLCK G +  A+  F       L P+ V Y+ LI G CKA
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +   A+++   M +    PD +  + L D  L  SG  E
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILID-GLCKSGDVE 392



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA+  F   T  G   DI TY  I+       ++ +AV L EK+T     P 
Sbjct: 140 LCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L++  CK GR+++A  +  K+++ G   +VVTY+ LIDG  K +    A+ +++
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  + V Y+ LI GL + G + +A   +        +PDVVT + +I G CKAG
Sbjct: 260 EMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 319

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R   A++++ SM   G+ P+ ++ S L
Sbjct: 320 RIGAAVRIFKSMEARGLAPNEVVYSAL 346



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 99/191 (51%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           D G+ P + T+N ++ G C   ++  A+  FE  T      +  T+T ++D   K  ++ 
Sbjct: 123 DYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ 182

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           DA  +  K+   G    + TY+ L++G  K   ++ A D+  ++ +N  +P++V+Y+ LI
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGL K     EA   F       L+ D V Y  LIRG  +AG+  +A  +Y +M   G +
Sbjct: 243 DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 302

Query: 200 PDGLLLSTLAD 210
           PD + LST+ D
Sbjct: 303 PDVVTLSTMID 313



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 1/192 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTILIDAFCKEGRMDDATM 83
           PD+ T+N +I GYC     +EA  +  ++     + P+  T  +++   CK G++  A  
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
            F      G   ++ TY+ ++D   K++ ++ A  + E++  N  +P I +Y+ L++GLC
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G +EEA+      +DN   PDVVTY  LI G  K  R  EA +L+  M   G++ D +
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271

Query: 204 LLSTLADYNLQS 215
             + L    LQ+
Sbjct: 272 CYTALIRGLLQA 283



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 2/181 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++AA   F ++ + G +PD+ TYN ++ G+C     D A  +F+ ++     PN
Sbjct: 385 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPN 444

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK  ++  A++ F  M E+G   +   YS L+DG  KS  ++    +++
Sbjct: 445 VVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 504

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + ++ N  + + LI  LCK   ++EA+  F+ A+    +P    Y  +I    K+ 
Sbjct: 505 EMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFN-AIRKEGMPHPYAYNSIISTLIKSA 562

Query: 182 R 182
           +
Sbjct: 563 K 563



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 38/221 (17%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--KPNSITFTILIDAFCKEGRMDDATMMF 85
           I+ + ++  +  L   D A +LF+ L+  +   + +  T   L+D F +  R  +A  + 
Sbjct: 23  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 82

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLCK 144
              L      +V T++ LI GY  ++  + AF V  EM E+  ++P++ ++++++ GLCK
Sbjct: 83  KNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCK 142

Query: 145 RGLMEEALYAFH------CALDNHL-----------------------------LPDVVT 169
            G +  A+  F       C +D H                               P + T
Sbjct: 143 SGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIAT 202

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           Y  L+ G CK GR  EA+ L   ++ NG  PD +  ++L D
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 243



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G + +V T + L+D + +++  + A ++ +        P++ ++++LI G C     EEA
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 152 LYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                   +++ + P + T+ +++ G CK+G+   AM  +++   NG   D    + + D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 211 Y 211
           +
Sbjct: 174 W 174


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKP 60
           L K  ++  A  +  ++  +GL+P++ T+ ++I G C +   + A +LF KL      KP
Sbjct: 261 LCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKP 320

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T++I  +CKEG++  A M+  +M+E+G   N  TY+ LIDG+ +  +   AF++ 
Sbjct: 321 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELM 380

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M      PNI +Y+ +I G CK+G +++A      A    L PD VTY +LI  +CK 
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQ 440

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G  T A+ L++ M  N   PD
Sbjct: 441 GHITYALDLFNQMAENSCHPD 461



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 4/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  H   A + F  +   G+ PD  ++  ++ G C   R +EA  L   +       +
Sbjct: 159 LRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLD 215

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T T+++ AFC++GR  D   +F +M+E G   NVV Y+  +DG  K   +K AF V E
Sbjct: 216 SATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLE 275

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKA 180
           EM    + PN+ +++ LIDGLCK G  E A   F      +   P+V TY ++I GYCK 
Sbjct: 276 EMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE 335

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+   A  L   M+  G+ P+    +TL D
Sbjct: 336 GKLARAEMLLGRMVEQGLAPNTNTYTTLID 365



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A  L G++ ++GL P+  TY T+I G+C     D A +L  K+      PN  
Sbjct: 334 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIY 393

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I  FCK+G++  A  +      +G   + VTY+ LI  + K  ++  A D++ +M
Sbjct: 394 TYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQM 453

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN+  P+I +Y+ +I   C++  ME++   F   L   L+P   TY  +I GYC+ G+ 
Sbjct: 454 AENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKS 513

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTL 208
           T A+++++ M+++G +PD    G L+S L
Sbjct: 514 TSALKVFERMVQHGCLPDPITYGALISGL 542



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 1/196 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LFG++ + G  P+++ Y   + G C    + +A  + E++    LKPN  T T LID  C
Sbjct: 238 LFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 74  KEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           K G  + A  +F K+++    K NV TY+ +I GY K   +  A  +   M E  ++PN 
Sbjct: 298 KIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y+ LIDG C+ G  + A    +       LP++ TY  +I G+CK G+  +A ++   
Sbjct: 358 NTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRM 417

Query: 193 MLRNGIMPDGLLLSTL 208
               G+ PD +  + L
Sbjct: 418 ATSQGLCPDKVTYTML 433



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 107/202 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++   G  P+I TYN II G+C   ++ +A ++    T   L P+ +T+T+
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTM 432

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK+G +  A  +F++M E     ++ TY+ +I  Y + + M+ +  ++++     
Sbjct: 433 LITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P   +Y+ +I G C+ G    AL  F   + +  LPD +TY  LI G CK  R  EA 
Sbjct: 493 LVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEAR 552

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L+++ML   ++P  +   TLA
Sbjct: 553 ALFETMLDKHMVPCDVTCVTLA 574



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 1/199 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E   + A  L   +   G   D  T   ++  +C   R  +   LF ++  +   PN +
Sbjct: 193 QEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVV 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T  +D  CK G +  A  +  +M+ KG K NV T++ LIDG  K    + AF ++ ++
Sbjct: 253 NYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKL 312

Query: 124 CE-NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            + ++  PN+ +Y+++I G CK G +  A       ++  L P+  TY  LI G+C+ G 
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGS 372

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              A +L + M   G +P+
Sbjct: 373 FDRAFELMNKMKLEGFLPN 391


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 117/207 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A + F  +   G+ P+ + Y  +I G+C +    EA+  F+ +    L P+  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ +I +  K G+  +A  +F K L+ G   +V  Y+ LI G+ K  +++ A  +Y+EM
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I+PNIV Y+ LI+GLCK G + +A   F    +  L+PDVVTY+ +I GYCK+G  
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           TEA +L+D M+  GI PDG +   L D
Sbjct: 748 TEAFKLFDEMISKGISPDGYIYCILID 774



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 113/209 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++   + ++GL PD  TY  ++ G+C   R  EA  +FE +    L PN  T+T 
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F KEG +++A  +  +M+ +G K NVVTY+ +I G  K+  M  A  ++ EM    
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y++LIDG  K   M +A           L P   TY++LI G C +    +A 
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           ++ D M+RNG+ P+  +  TL    +Q S
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQES 500



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A+ +F +    G+ PD+  YN++I G+C    +++A QL++++    + PN
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  LI+  CK G +  A  +F ++ EK    +VVTYS +IDGY KS N+  AF +++
Sbjct: 696 IVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD 755

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ISP+   Y ILIDG  K G +E+AL  FH A     +  +  +  LI  +CK G
Sbjct: 756 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHG 814

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +L+D M+   + P+ +  + L D
Sbjct: 815 KVIEARELFDDMVDKKLTPNIVTYTILID 843



 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 118/205 (57%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A +L+ ++   G+ P+I+ YNT+I G C L  + +A +LF+++    L P+ +
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVV 732

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +ID +CK G + +A  +F +M+ KG   +   Y  LIDG  K  N++ A  ++ E 
Sbjct: 733 TYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA 792

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + ++  ++ +++ LID  CK G + EA   F   +D  L P++VTY ILI  Y KA   
Sbjct: 793 QQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMM 851

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA QL+  M    I+P+ L  ++L
Sbjct: 852 EEAEQLFLDMETRNIIPNTLTYTSL 876



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 109/208 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E   + A++L   +   G+ PD+  YN +I G C   +++EA  L   +    +KPN+
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+   I+ + K G +  A   F  ML  G   N V Y+ LI G+    N   A   ++ 
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+I +YS +I  L K G  +EA+  F   L   ++PDV  Y  LI G+CK G 
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A QLYD ML NGI P+ ++ +TL +
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLIN 704



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A ++  Q+   G++P++  Y T+I  Y   +R + A++L + +    + P+ 
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  LI   C+  ++++A M+   M EKG K N  TY   I+ Y KS  ++ A   +++
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  + I PN V Y+ILI G C  G   EAL  F C L+  L+PD+  Y+ +I    K G+
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EAM ++   L+ G++PD  L ++L
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSL 667



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 100/185 (54%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P++ TYN  I G C    +DEA+++ + +    L P+  T+T+L+D FCK+ R  +A +
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F  M   G   N  TY+ LIDG+ K  N++ A  + +EM    +  N+V+Y+ +I G+ 
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G M +A+  F+  L   L PD  TY +LI GY K+    +A +L   M    + P   
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 204 LLSTL 208
             S L
Sbjct: 453 TYSVL 457



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 1/221 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +    K++G + +  + PD+ TY  +I  +C +  + +   +  ++   + KPN
Sbjct: 217 LLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPN 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I   C+ G +D+A  +   M+EKG   +  TY+ L+DG+ K +  K A  ++E
Sbjct: 276 LFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFE 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + ++PN  +Y+ LIDG  K G +EEAL      +   L  +VVTY  +I G  KAG
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
              +AM L++ ML  G+ PD    + L D  L+S    + C
Sbjct: 396 EMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKAC 436



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +LF ++ ++ L PD++TY+TII GYC    L EA +LF+++    + P+
Sbjct: 706 LCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ILID   KEG ++ A  +F +  +K    ++  ++ LID + K   +  A ++++
Sbjct: 766 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFD 824

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++PNIV+Y+ILID   K  +MEEA   F      +++P+ +TY  L+  Y + G
Sbjct: 825 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 884

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              + + L+  M   GI  D +    +A
Sbjct: 885 NRFKMISLFKDMEARGIACDAIAYGVMA 912



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 105/201 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE +++ AL++  ++  RGL+ +++TYN +I G      + +A+ LF ++    L+P+
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPD 415

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+ +LID + K   M  A  + ++M  +    +  TYS LI G   S +++ A +V +
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  N + PN+  Y  LI    +    E A+      + N +LPD+  Y  LI G C+A 
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           +  EA  L   M   GI P+ 
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNA 556



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K   +  A+ LF ++   GLEPD  TYN +I GY   + + +A +L  ++   +L P+
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI   C    +  A  +  +M+  G K NV  Y  LI  Y +    + A ++ +
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA------------------------LYA--- 154
            M  N + P++  Y+ LI GLC+   +EEA                        LY+   
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570

Query: 155 --------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                   F   L + ++P+ V Y ILI+G+C  G   EA+  +  ML  G++PD
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 97/190 (51%), Gaps = 1/190 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L+ AL LF +   + +   +  +N++I  +C   ++ EA +LF+ +   +L PN +
Sbjct: 778 KEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 836

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILIDA+ K   M++A  +F  M  +    N +TY+ L+  Y +  N      ++++M
Sbjct: 837 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 896

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I+ + ++Y ++    CK G   EAL   + +L   +  +   +  LI   CK  + 
Sbjct: 897 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 956

Query: 184 TEAMQLYDSM 193
           +  ++L   M
Sbjct: 957 STVLELLSEM 966



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 51/243 (20%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP-----------------NSITFTILIDA 71
           +Y+ +    C+   + +A  + EKL   +  P                 N   F I ID 
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP- 130
           F   G +++A+ +F   + +G    ++  + L+    K+  M   + VY  M E  I P 
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 131 ---------------------------------NIVSYSILIDGLCKRGLMEEALYAFHC 157
                                            N+ +Y+  I GLC+ G ++EAL     
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKL 301

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            ++  L PD  TY +L+ G+CK  R  EA  +++SM  +G+ P+    + L D  ++   
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 218 SQE 220
            +E
Sbjct: 362 IEE 364



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 35/176 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT---- 66
           A +LF  + D+ L P+I+TY  +I  Y     ++EA QLF  +    + PN++T+T    
Sbjct: 819 ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 878

Query: 67  -------------------------------ILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                                          ++  A+CKEG+  +A  + +K L +G K 
Sbjct: 879 SYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKL 938

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               +  LI    K + + +  ++  EM +  +S +  + + L+ G  K G  +EA
Sbjct: 939 EDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 994



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 49/108 (45%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           + LF  +  RG+  D I Y  +   YC   +  EA++L  K     +K     F  LI  
Sbjct: 890 ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFH 949

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            CKE ++     + S+M ++    +  T + L+ G++KS N   A  V
Sbjct: 950 LCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKV 997


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGYVP 414



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +J+   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 3/204 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  ++ ++  +G+ PD++TY T+I G+C + ++ EA  L  ++    + P+  TF++
Sbjct: 214 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSV 273

Query: 68  LIDAFCKEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           LIDA  KEG+   +D+A  +F +M  K    ++VTY+ LIDG  K+ +++ A  + +EM 
Sbjct: 274 LIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMK 333

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ I P++ SY+IL+DGLCK G +E A   F   L      +V  Y ++I G CKAG   
Sbjct: 334 EHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFG 393

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EAM L   M   G MP+ +   T+
Sbjct: 394 EAMDLKSKMEGKGCMPNAITFRTI 417



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 3/206 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +   L    Q+  +G + D ++Y T+I G C         +L  KL    +KP+ + +  
Sbjct: 144 IKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNT 203

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I++ CK   + DA  ++S+M+ KG   +VVTY+ LI G+     MK AF +  EM   N
Sbjct: 204 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN 263

Query: 128 ISPNIVSYSILIDGLCKRG---LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           I+P++ ++S+LID L K G   +++EA+  F      +++PD+VTY  LI G CK     
Sbjct: 264 INPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 323

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A+ L   M  +GI PD    + L D
Sbjct: 324 RAIALLKEMKEHGIQPDVYSYTILLD 349



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 100/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K       + LF Q    G+ PD+ T + +I  +C    +  A  +F  +      P+
Sbjct: 68  LVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPD 127

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT   LI   C  G +        +++ +G + + V+Y  LI+G  K+   K+   +  
Sbjct: 128 AITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLR 187

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  +++ P++V Y+ +I+ LCK  L+ +A   +   +   + PDVVTY  LI G+C  G
Sbjct: 188 KLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMG 247

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L + M    I PD    S L D
Sbjct: 248 KMKEAFSLLNEMKLKNINPDVYTFSVLID 276



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 81/142 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ LF ++  + + PDI+TYN++I G C  + L+ A+ L +++    ++P+  
Sbjct: 283 KKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVY 342

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++TIL+D  CK GR++ A   F  +L KG   NV  Y+ +I+G  K+     A D+  +M
Sbjct: 343 SYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKM 402

Query: 124 CENNISPNIVSYSILIDGLCKR 145
                 PN +++  +I  L ++
Sbjct: 403 EGKGCMPNAITFRTIICALSEK 424



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 2/185 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    +N I+       R    + LF++     + P+  T +ILI+ FC +  +  A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+ +L++G   + +T + LI G      +K     ++++       + VSY  LI+GLCK
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 145 RGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G   +A+      L+ H + PDVV Y  +I   CK     +A  +Y  M+  GI PD +
Sbjct: 176 AG-ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234

Query: 204 LLSTL 208
             +TL
Sbjct: 235 TYTTL 239



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 76/166 (45%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
            AV  F  +  ++  P +  F  ++ +  K  R      +F +    G   ++ T S LI
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 100

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           + +    ++  AF V+  + +    P+ ++ + LI GLC RG +++ LY     +     
Sbjct: 101 NCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            D V+Y  LI G CKAG      +L   +  + + PD ++ +T+ +
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIIN 206



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A+ L  ++ + G++PD+ +Y  ++ G C   RL+ A + F+ L       N
Sbjct: 316 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLN 375

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ++I+  CK G   +A  + SKM  KG   N +T+  +I    +      A  +  
Sbjct: 376 VWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILR 435

Query: 122 EM 123
           EM
Sbjct: 436 EM 437



 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A + F  L  +G   ++  YN +I G C      EA+ L  K+      PN
Sbjct: 351 LCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPN 410

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +ITF  +I A  ++   D A  +  +M+ +G
Sbjct: 411 AITFRTIICALSEKDENDKAEKILREMIARG 441


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 114/200 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A    G +   G++P+I+TYNTI+ GYCS  R++ A  +   +   +++P
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S T+  LI   CK+GR+++A+ +F +M++KG + + V Y+ LIDG+    N+  A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  ISP + +Y+ LI  L      +EA        +  + PD +TY ILI GYC+ 
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
               +A  L+D ML +GI P
Sbjct: 410 ANAKKAFLLHDEMLASGIKP 429



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A K+F ++  +GL P  + YNT+I G+C+   LD A    +++    + P   
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI A   E R D+A  M  ++ EKG   + +TY+ LI+GY +  N K AF +++EM
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF---------------------HCALDN- 161
             + I P   +Y+ L+  L K+  M+EA   F                     HC+  N 
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482

Query: 162 -------------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                         + PD VT+  +++G+C+ G+  EA +L+D M R GI PD +  +TL
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 10/215 (4%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C      D A + F  + ++G+ P I T N+++  +  LNR + A  L+ ++  ++
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           +K +  TF I+I+  CKEG++  A      M   G K N+VTY+ ++ GY  S  +++A 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +   M    I P+  +Y  LI G+CK+G +EEA   F   +   L P  V Y  LI G+
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           C  G    A    D ML+ GI P      T++ YN
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISP------TMSTYN 365



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++AA  +   +  + +EPD  TY ++I G C   RL+EA ++FE++    L+P+++ + 
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID FC +G +D A+    +ML+KG    + TY+ LI   F  Q    A  + +E+ E 
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP+ ++Y+ILI+G C+    ++A       L + + P   TY  L+    K  R  EA
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L+  +   G++PD ++ + L D
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALID 474



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E   D A  +  ++ ++G+ PD ITYN +I GYC      +A  L +++    +KP 
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L+    K+ RM +A  +F K+  +G   + + ++ LIDG+  + N+K AF++ +
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P+ V+++ ++ G C+ G +EEA   F       + PD +++  LI GY + G
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A ++ + ML  G  P  L  + L
Sbjct: 551 DIKDAFRVRNEMLDTGFNPTVLTYNAL 577



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 103/185 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+  +  A  LF ++T  G+ PD I +N +I G+CS + +  A +L + +  +++ P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  ++   C+EG++++A  +F +M  +G K + ++++ LI GY +  ++K AF V 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +   +P +++Y+ L+ GLCK    + A       +   + PD  TY  LI G  K 
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619

Query: 181 GRPTE 185
             P E
Sbjct: 620 NIPDE 624



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +SI F  LI + C   R D+A   F  M EKG    + T + L+  + K    ++A+ +Y
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    I  ++ +++I+I+ LCK G +++A         + + P++VTY  ++ GYC +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GR   A  +  +M R  I PD     +L
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSL 297


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   AL +  ++   GL P +ITY ++I   C    ++ A +  +++    L PN  
Sbjct: 322 KEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNER 381

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D F ++G M++A  +  +M++ G   +VVTY+ LI+G+  +  M  A  V E+M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++P++VSYS ++ G C+   ++EAL      +   + PD +TY+ LI+G+C+  R 
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L+D MLR G+ PD    + L +
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALIN 528



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 115/206 (55%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  RG   D +TYNT+I GYC      +A+ +  ++    L P+ IT+T LI + CK G
Sbjct: 300 EMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAG 359

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            M+ AT    +M  +G   N  TY+ L+DG+ +   M  A+ V +EM +N  SP++V+Y+
Sbjct: 360 NMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYN 419

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI+G C  G M +A+       +  L PDVV+Y+ ++ G+C++    EA+++   M+  
Sbjct: 420 ALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK 479

Query: 197 GIMPDGLLLSTLADYNLQSSGSQEHC 222
           GI PD +  S+L     +   ++E C
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEAC 505



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 1/204 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCVQLKPNSIT 64
           C +D AL +       G  P +++YN ++       R +  A  +F+++   Q+ PN  T
Sbjct: 148 CLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFT 207

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + ILI  FC  G +D A   F +M +KG   NVVTY+ LIDGY K + +   F++   M 
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA 267

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              + PN++SY+++I+GLC+ G M+E  +            D VTY  LI+GYCK G   
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +A+ ++  MLR+G+ P  +  ++L
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSL 351



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 117/207 (56%), Gaps = 15/207 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++  ++  +G++PD ITY+++I G+C   R  EA  LF+++  V L P+  T+T 
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-----YEE 122
           LI+A+C EG +  A  + ++M+EKG   +VVTYS LI+G  K    + A  +     YEE
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEE 585

Query: 123 MCENNIS--------PNIVSYSI--LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
              ++++         NI   S+  LI G C +G+M EA   F   L+ +  PD   Y +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNV 645

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           +I G+C+ G   +A  LY  M+++G +
Sbjct: 646 MIHGHCRGGDIRKAYSLYKEMVKSGFL 672



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ +++ A ++  ++ D G  P ++TYN +I G+C   ++ +A+ + E +    L P+ +
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ ++  FC+   +D+A  +  KM+ KG K + +TYS LI G+ + +  K A D+++EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEM 511

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+  +Y+ LI+  C  G +++A+   +  ++  +LPDVVTY++LI G  K  R 
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L   +     +P  +   TL +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A +   Q+  RGL P+  TY T++ G+     ++EA ++ +++      P+ +
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  C  G+M DA  +   M EKG   +VV+YS ++ G+ +S ++  A  V  +M
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+ ++YS LI G C++   +EA   F   L   L PD  TY  LI  YC  G  
Sbjct: 477 VAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDL 536

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A+QL++ M+  G++PD +  S L +
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLIN 563



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 104/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++    + P++ TYN +I G+C    LD A++ F+++      PN +T+  LID
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK  ++DD   +   M  KG + N+++Y+ +I+G  +   MK    V  EM +   S 
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ LI G CK G   +AL      L + L P V+TY  LI   CKAG    A +  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G+ P+    +TL D
Sbjct: 369 DQMRVRGLCPNERTYTTLVD 388



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 15/213 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L  A++L  ++ ++G+ PD++TY+ +I G     R  EA +L  KL   +  P+ +T
Sbjct: 533 EGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVT 592

Query: 65  FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           +  LI+                FC +G M +A  +F  MLEK  K +   Y+ +I G+ +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
             +++ A+ +Y+EM ++    + V+   L+  L K G + E        L +  L +   
Sbjct: 653 GGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQ 712

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
             +L+    + G     + +   M ++G +P+G
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL +FG+++ +G +PDI T+N++I G C ++ +++A+ L+  +    +  N
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+TF  LI AF + G + +A  + + ML +G   + +TY+ LI    K+  ++    ++E
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++P+I++ +ILI+G C  G +  AL      +     PD+VTY  LI G CK G
Sbjct: 582 EMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA+ L++ +   GI PD +  +TL
Sbjct: 642 RIQEALNLFEKLQAEGIQPDSITYNTL 668



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 113/199 (56%), Gaps = 7/199 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D ALKL  ++   G  PD+ T+NT+I G+C LNR+ E  +L +++      PN
Sbjct: 255 LSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPN 314

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ--NMKSAFDV 119
            +T+  L+   CK  R+D+A  + SK+    P  NVV ++ L++G+ ++   N  +AF V
Sbjct: 315 DMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFNTLVNGFVRNGRLNEATAF-V 369

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y++M  N   P++ ++S L++GLCK+GL   AL   +        P++ TY ILI G+CK
Sbjct: 370 YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCK 429

Query: 180 AGRPTEAMQLYDSMLRNGI 198
            G+  EA  +   ML  G 
Sbjct: 430 KGQLEEAGLILREMLTKGF 448



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 104/189 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +A   ++ ++ + G  PD+ T++T++ G C       A++L   +     KPN  T+TIL
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID FCK+G++++A ++  +ML KG   N V Y+ LI    K   +  A D++ EM     
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+I +++ LI GLC+   ME+AL  +   +   ++ + VT+  LI  + + G   EA++
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543

Query: 189 LYDSMLRNG 197
           L + ML  G
Sbjct: 544 LVNDMLFRG 552



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 5/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKP 60
           L K C +D A  L  ++      P+++ +NT++ G+    RL+EA   +++K+      P
Sbjct: 325 LCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  TF+ L++  CK+G    A  + + M  KG K N+ TY+ LIDG+ K   ++ A  + 
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM     S N V Y+ LI  LCK G + EAL  F         PD+ T+  LI G C+ 
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
               +A+ LY  M+  G++ + +  +TL    L+    QE
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQE 540



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 106/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+    +AL+L   +  +G +P++ TY  +I G+C   +L+EA  +  ++       N
Sbjct: 392 LCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLN 451

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LI A CK G++ +A  MF +M  KG K ++ T++ LI G  +   M+ A  +Y 
Sbjct: 452 TVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYR 511

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +  N V+++ LI    +RG ++EAL   +  L      D +TY  LI+  CK G
Sbjct: 512 DMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG 571

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              + + L++ M+R G+ P
Sbjct: 572 AVEKGLGLFEEMIRKGLTP 590



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A  +  ++  +G   + + YN +I   C   ++ EA+ +F +++    KP+  
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI   C+   M+DA  ++  M+ +G  AN VT++ LI  + +   ++ A  +  +M
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                  + ++Y+ LI  LCK G +E+ L  F   +   L P ++T  ILI G+C AG+ 
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A++    M+  G  PD
Sbjct: 609 HNALEFMRDMIHRGFSPD 626



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 99/178 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   +  ALKL   +  RG   D ITYN +I   C    +++ + LFE++    L P+
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT  ILI+ FC  G++ +A      M+ +G   ++VTY+ LI+G  K   ++ A +++E
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++    I P+ ++Y+ LI  LC+ G  ++A +  +  ++N  +P+ VT+ IL+  + K
Sbjct: 652 KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 5/202 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A  +F  +  +G+ P+  T+  ++   C +N +D A  L   +T     PNS+ +  LI
Sbjct: 193 VASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLI 252

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K  R+D+A  +  +M   G   +V T++ +I G+ +   +     + + M     +
Sbjct: 253 DALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFT 312

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ- 188
           PN ++Y  L+ GLCK   ++EA       L     P+VV +  L+ G+ + GR  EA   
Sbjct: 313 PNDMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAF 368

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           +YD M+ NG +PD    STL +
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVN 390



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 63/113 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+    +  RG  PDI+TYN++I G C   R+ EA+ LFEKL    ++P+SIT+  LI 
Sbjct: 611 ALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLIC 670

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
             C+EG  DDA  +  + +E G   N VT++ L+  + K  N +     Y + 
Sbjct: 671 WLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQF 723



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  ++ +++D          A+ +F  ML KG   N  T+  ++        + +A  
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +  +M ++   PN + Y  LID L KR  ++EAL            PDV T+  +I G+C
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           +  R  E  +L D M+  G  P+
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPN 314


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A K+F ++   GL PD ++YNT++ GYC      EA+ +F ++T   + P+ +
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI   CK G ++ A  +  +M E+G + N VT++ LIDG+ K   +  A      M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P++V Y+ LI+G C  G M+EA    H      L PDVVTY+ +I  YCK    
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L   ML  G++PD +  S+L
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSL 436



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 119/201 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L G + D GL+P+++T+N+++ G C   ++++A ++F+++    L P+ +++  
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNT 260

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  +CK G   +A  +F++M +KG   +VVT++ LI    K+ N++ A  +  +M E  
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N V+++ LIDG CK+G +++AL A        + P VV Y  LI GYC  GR  EA 
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L   M   G+ PD +  ST+
Sbjct: 381 ELLHEMEAKGLKPDVVTYSTI 401



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 127/220 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K  +L+ A+ L  Q+ +RGL+ + +T+  +I G+C    LD+A+     +   ++KP
Sbjct: 299 VMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKP 358

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  LI+ +C  GRMD+A  +  +M  KG K +VVTYS +I  Y K+ +  SAF++ 
Sbjct: 359 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 418

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E  + P+ ++YS LI  LC+   + +A   F   +   L PD  TY  LI G+CK 
Sbjct: 419 QQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 478

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           G    A+ L+D M++ G++PD +  S L +   +S+ + E
Sbjct: 479 GNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 108/210 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + + +  L +A + F  +   G+ P++ TYN +I   C      EA+ +   +      P
Sbjct: 124 LALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGP 183

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+  L+ AF + G +D A  +   ML+ G K N+VT++ +++G  K+  M+ A  V+
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    ++P+ VSY+ L+ G CK G   EAL  F       ++PDVVT+  LI   CKA
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G    A+ L   M   G+  + +  + L D
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALID 333



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 105/186 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL     +    ++P ++ YN +I GYC + R+DEA +L  ++    LKP+ +
Sbjct: 337 KKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 396

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +I A+CK      A  +  +MLEKG   + +TYS LI    + + +  A  +++ M
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+  +Y+ LIDG CK G +E AL      +   +LPDVVTY++LI G  K+ R 
Sbjct: 457 IKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516

Query: 184 TEAMQL 189
            EA QL
Sbjct: 517 MEAQQL 522



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 15/213 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C   +A +L  Q+ ++G+ PD ITY+++I   C   RL +A  LF+ +  + L+P+  
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA----FDV 119
           T+T LID  CKEG ++ A  +  KM++ G   +VVTYS LI+G  KS     A    F +
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526

Query: 120 Y-EEMCENNI----------SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           Y EE    N              + S   L+ G C +GLM EA   +   LD +   D  
Sbjct: 527 YHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGS 586

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            Y++LI G+C+AG   +A+  +  ML+ G  P+
Sbjct: 587 VYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPN 619



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 1/161 (0%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ + +  ++ A   +  +  A   F  ML  G   NV TY+ LI       + K A  +
Sbjct: 114 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M      PN+V+Y+ L+    + G ++ A       LD  L P++VT+  ++ G CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           AG+  +A +++D M+R G+ PDG+  +TL     ++  S E
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHE 273



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 15/212 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++ AL L  ++   G+ PD++TY+ +I G     R  EA QL  KL   +  P + 
Sbjct: 477 KEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANT 536

Query: 64  TFTIL---------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            +  L               +  FC +G M++A  ++  ML++    +   YS LI G+ 
Sbjct: 537 KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHC 596

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           ++ N+  A   +++M +   +PN  S   LI GL + G++ EA       L+   L D  
Sbjct: 597 RAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAE 656

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
               LI      G     + +   M ++G++P
Sbjct: 657 ASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score = 42.7 bits (99), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 55/124 (44%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K++  + DR    D   Y+ +I G+C    + +A+   +++      PNS +   
Sbjct: 566 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTIS 625

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    + G + +A  +  ++L     A+      LID      N+ +  DV   M ++ 
Sbjct: 626 LIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 685

Query: 128 ISPN 131
           + P+
Sbjct: 686 LLPS 689


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A  +F +L ++GL P+  TYN++I G C    +D+A QL E++    + P+
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILID  CK G ++ A  +F  +  +G   N VTY+ ++DGY KS+N  +AF + E
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+   Y+++++  CK    E+AL  F   L+       V++  LI GYCK+G
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSG 779

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +  EA  L + M+    +P+ +  ++L D+N ++ 
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAG 814



 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 117/208 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A + F ++   G+ P++  Y  +I G+C    + EA  +F  +   ++  +  
Sbjct: 533 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 592

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI    + G+M +A  +FS++ EKG   N  TY+ LI G  K  N+  A  + EEM
Sbjct: 593 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 652

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C   I+P+IV+Y+ILIDGLCK G +E A   F       L P+ VTYA ++ GYCK+  P
Sbjct: 653 CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 712

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           T A QL + ML  G+ PD  + + + ++
Sbjct: 713 TAAFQLLEEMLLRGVPPDAFIYNVILNF 740



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ +  +  ++ ++G+ PD+  YN++I G+C   R++EA     ++   +L+PN+ 
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   ID + K G M+ A   F++ML  G   NV  Y+ LI+G+ K  N+  AF V+  +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  ++ +YS+LI GL + G M EA   F    +  LLP+  TY  LI G CK G  
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A QL + M   GI PD +  + L D
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILID 669



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++L   + D+GL PD+ TY+ +I G+C   R  EA  +  ++  V LKP  IT+  
Sbjct: 257 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 316

Query: 68  LIDAF-----------------------------------CKEGRMDDATMMFSKMLEKG 92
           LID F                                   CK G+M+ A  +  +M+EKG
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            + +  TYS LI+G+ + QNM  AF++ +EM +  ++P +++YS++I+GLC+ G ++   
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 + N L P+ V Y  L+  + K GR  E+  + + M   GI+PD
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF  +  RGL P+ +TY  ++ GYC       A QL E++    + P+
Sbjct: 671 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  + ++++  CKE + + A  +F +MLEKG  A+ V+++ LI+GY KS  ++ A  + E
Sbjct: 731 AFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLE 789

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    PN V+Y+ LID  CK G+M EA   +    + +++P   TY  L+ GY   G
Sbjct: 790 EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 849

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             +E   L++ M+  GI PD +    + D   +     E C
Sbjct: 850 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 105/195 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A +L  ++  R L P ++TY+ II G C    L     +  ++    LKPN++ +T
Sbjct: 396 NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 455

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+ A  KEGR++++ M+  +M E+G   +V  Y+ LI G+ K++ M+ A     EM E 
Sbjct: 456 TLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER 515

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN  +Y   IDG  K G ME A   F+  L   +LP+V  Y  LI G+CK G  TEA
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 575

Query: 187 MQLYDSMLRNGIMPD 201
             ++  +L   ++ D
Sbjct: 576 FSVFRFILSRRVLQD 590



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 17/224 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-----------------LD 44
           L+K   ++   K+F  +    + PD+ TY  +I  +C +                   LD
Sbjct: 199 LLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLD 258

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           EA++L   +    L P+  T+ ILI+ FC E R  +A +M  +M++ G K   +TY+ LI
Sbjct: 259 EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 318

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           DG+ +  +++ AF + +EM    I  N++ ++ L++G+CK G ME+AL      ++  + 
Sbjct: 319 DGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 378

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           PD  TY++LI G+C+      A +L D M +  + P  L  S +
Sbjct: 379 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 422



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L     +  ++   GL+P+ + Y T++  +    R++E+  + E++    + P+   + 
Sbjct: 431 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 490

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FCK  RM++A     +MLE+  + N  TY   IDGY K+  M+ A   + EM   
Sbjct: 491 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 550

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+  Y+ LI+G CK G + EA   F   L   +L DV TY++LI G  + G+  EA
Sbjct: 551 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 610

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             ++  +   G++P+    ++L
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSL 632



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 17/228 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE   + AL LF ++ ++G     +++NT+I GYC   +L EA  L E++   Q  PN +
Sbjct: 743 KEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 801

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CK G M +A  ++ +M E+       TY+ L+ GY    NM     ++EEM
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD-----------VVTYAI 172
               I P+ ++Y ++ID  C+ G + EA     C L + +L             + T ++
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEA-----CKLKDEILVKGMPMKSGFRLGLPTCSV 916

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + RG+  AG   EA ++  SM++ G + +   L  L D N   + S++
Sbjct: 917 IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSED 964



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 106/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL++  ++ ++G+EPD  TY+ +I G+C    +  A +L +++   +L P  +
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++++I+  C+ G +     +  +M+  G K N V Y+ L+  + K   ++ +  + E M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++  Y+ LI G CK   MEEA       L+  L P+  TY   I GY KAG  
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A + ++ ML  G++P+
Sbjct: 538 EIADRYFNEMLSCGVLPN 555



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 100/205 (48%), Gaps = 17/205 (8%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
             P +++ N+++      N+++   ++F+ +   ++ P+  T+T +I A CK G + DA 
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244

Query: 83  MMF-----------------SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +                    M++KG   ++ TY  LI+G+   +  + A  +  EM +
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P  ++Y+ LIDG  ++G +E+A       +   +  +++ +  L+ G CKAG+  +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++   M+  G+ PD    S L +
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIE 389



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 21/170 (12%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMF--SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           PNS+ F +L+D++ K G + +A  +F   K  E  P  ++++ + L+    K   ++  +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRP--SLLSCNSLLGDLLKGNKVELFW 209

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRG-----------------LMEEALYAFHCALD 160
            V++ MC + + P++ +Y+ +I   CK G                 L++EA+      +D
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVD 269

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L+PD+ TY ILI G+C   R  EA  +   M+  G+ P+ +  + L D
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 319



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ + ++ ++  Y  +  L EAV +F      + +P+ ++   L+    K  +++    +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-----------------NN 127
           F  M       +V TY+ +I  + K  N+K A  V  EM E                   
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y ILI+G C      EA       +D  L P+ +TY  LI G+ + G   +A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++ D M+  GI  + ++ +TL
Sbjct: 332 RIKDEMVACGIEANLIIWNTL 352



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 41/158 (25%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A +L+ ++ +R + P   TY +++ GY ++  + E   LFE++    ++P+ +T+ +
Sbjct: 816 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 875

Query: 68  LIDAFCKEG-----------------------------------------RMDDATMMFS 86
           +IDA+C+EG                                          MD+A  +  
Sbjct: 876 MIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLR 935

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            M++ G  +N  +   L+DG     N + + ++ ++M 
Sbjct: 936 SMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 114/200 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A    G +   G++P+I+TYNTI+ GYCS  R++ A  +   +   +++P
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S T+  LI   CK+GR+++A+ +F +M++KG + + V Y+ LIDG+    N+  A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  ISP + +Y+ LI  L      +EA        +  + PD +TY ILI GYC+ 
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
               +A  L+D ML +GI P
Sbjct: 410 ANAKKAFLLHDEMLASGIKP 429



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A K+F ++  +GL P  + YNT+I G+C+   LD A    +++    + P   
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI A   E R D+A  M  ++ EKG   + +TY+ LI+GY +  N K AF +++EM
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNH------ 162
             + I P   +Y+ L+  L K+  M+EA               +  F+  +D H      
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482

Query: 163 --------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                         + PD VT+  +++G+C+ G+  EA +L+D M R GI PD +  +TL
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 10/215 (4%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C      D A + F  + ++G+ P I T N+++  +  LNR + A  L+ ++  ++
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           +K +  TF I+I+  CKEG++  A      M   G K N+VTY+ ++ GY  S  +++A 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +   M    I P+  +Y  LI G+CK+G +EEA   F   +   L P  V Y  LI G+
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           C  G    A    D ML+ GI P      T++ YN
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISP------TMSTYN 365



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E   D A  +  ++ ++G+ PD ITYN +I GYC      +A  L +++    +KP 
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L+    K+ RM +A  +F K+  +G   +V+ ++ LIDG+  + N+K AF++ +
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P+ V+++ ++ G C+ G +EEA   F       + PD +++  LI GY + G
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A ++ + ML  G  P  L  + L
Sbjct: 551 DIKDAFRVRNEMLDTGFNPTVLTYNAL 577



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 104/185 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+  +  A  LF ++T  G+ PD+I +N +I G+CS + +  A +L + +  +++ P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  ++   C+EG++++A  +F +M  +G K + ++++ LI GY +  ++K AF V 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +   +P +++Y+ L+ GLCK    + A       +   + PD  TY  LI G  K 
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619

Query: 181 GRPTE 185
             P E
Sbjct: 620 NIPDE 624



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +SI F  LI + C   R D+A   F  M EKG    + T + L+  + K    ++A+ +Y
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    I  ++ +++I+I+ LCK G +++A         + + P++VTY  ++ GYC +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GR   A  +  +M R  I PD     +L
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSL 297


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A +L  ++  RG+ PD +TY ++I G+C  N+LD+A  + + +      PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+ +CK   +DD   +F KM  +G  A+ VTY+ LI G+ +   ++ A ++++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+IVSY IL+DGLC  G  E+AL  F     + +  D+  Y I+I G C A 
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A  L+ S+   G+ PD
Sbjct: 507 KVDDAWDLFCSLPLKGVKPD 526



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A  LF ++  +G + DII Y T+I G+C   R D+  +L   +   ++ P+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ LID F KEG++ +A  +  +M+++G   + VTY+ LIDG+ K   +  A  + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNI +++ILI+G CK  L+++ L  F       ++ D VTY  LI+G+C+ G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A +L+  M+   + PD
Sbjct: 437 KLEVAKELFQEMVSRRVRPD 456



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 109/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A    G++   G EPD +T++T+I G C   R+ EA++L +++  +  KP  IT  
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C  G++ DA ++  +M+E G + N VTY  ++    KS     A ++  +M E 
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I  + V YSI+IDGLCK G ++ A   F+         D++ Y  LIRG+C AGR  + 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   M++  I PD +  S L D
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALID 325



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 110/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L  ++ +R ++ D + Y+ II G C    LD A  LF ++     K + I +T LI 
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  GR DD   +   M+++    +VV +S LID + K   ++ A ++++EM +  ISP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ LIDG CK   +++A +     +     P++ T+ ILI GYCKA    + ++L+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G++ D +  +TL
Sbjct: 411 RKMSLRGVVADTVTYNTL 428



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 118/206 (57%), Gaps = 4/206 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  L+LF +++ RG+  D +TYNT+I G+C L +L+ A +LF+++   +++P+ +++ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  C  G  + A  +F K+ +   + ++  Y+ +I G   +  +  A+D++  +    
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+I+I GLCK+G + EA   F    ++   P+  TY ILIR +   G  T++ 
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582

Query: 188 QLYDSMLRNGIMPDG----LLLSTLA 209
           +L + + R G   D       LSTLA
Sbjct: 583 KLIEEIKRCGFSVDASTLRFALSTLA 608



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 110/206 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+L  ++ + G +P +IT N ++ G C   ++ +AV L +++     +PN +T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++   CK G+   A  +  KM E+  K + V YS +IDG  K  ++ +AF+++ EM 
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                 +I+ Y+ LI G C  G  ++        +   + PDVV ++ LI  + K G+  
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +L+  M++ GI PD +  ++L D
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLID 360



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L L  Q+  +G+  ++ T + +I   C   +L  A     K+  +  +P+++TF+ L
Sbjct: 89  DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C EGR+ +A  +  +M+E G K  ++T + L++G   +  +  A  + + M E   
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN V+Y  ++  +CK G    A+       +  +  D V Y+I+I G CK G    A  
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L++ M   G   D ++ +TL
Sbjct: 269 LFNEMEIKGFKADIIIYTTL 288



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 24/224 (10%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL++F ++    +E DI  YN II G C+ +++D+A  LF  L    +KP+  T+ I+
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE------ 122
           I   CK+G + +A ++F KM E G   N  TY+ LI  +    +   +  + EE      
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593

Query: 123 ----------------MCENNISPNIVSYSILIDGLC--KRGLMEEALYAFHCALDNHLL 164
                           M +    P++ +++ L+   C  +   + +A   F         
Sbjct: 594 SVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYK 653

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           P+VVTY  +I+G       ++   + D M   G  P+ +  ST 
Sbjct: 654 PNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTF 697



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 26/212 (12%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF  L  +G++PD+ TYN +I G C    L EA  LF K+      PN  T+ 
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 67  ILIDAFCKEG-----------------RMDDATMMFS-----KMLEKGPKANVVTYSCLI 104
           ILI A   EG                  +D +T+ F+     +ML+ G + +V T++ L+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626

Query: 105 DGYFKSQNMKSAFD---VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
             +   +N  S +D   +++ M      PN+V+Y+ +I GL    ++ +         + 
Sbjct: 627 RPFCLEEN-ASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFER 685

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
              P+ VT +  I G CK      A+ L   M
Sbjct: 686 GCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 98/202 (48%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF ++T     P +I ++ +        + D  + L +++    +  N  T +I+
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C+  ++  A     K+++ G + + VT+S LI+G      +  A ++ + M E   
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P +++ + L++GLC  G + +A+      ++    P+ VTY  +++  CK+G+   AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M    I  D +  S + D
Sbjct: 234 LLRKMEERKIKLDAVKYSIIID 255



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 24/175 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTII---------------------CGY-CS 39
           L K+  L  A  LF ++ + G  P+  TYN +I                     CG+   
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE--GRMDDATMMFSKMLEKGPKANV 97
            + L  A+    ++     +P+  TFT L+  FC E    + DA  +F  M   G K NV
Sbjct: 597 ASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNV 656

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           VTY+ +I G      +     V ++M E    PN V+ S  I GLCK+ L   A+
Sbjct: 657 VTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAI 711



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 2/122 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD--EAVQLFEKLTCVQLKPNSITF 65
           L  AL    ++   G EPD+ T+ T++  +C        +A  LF+ +  +  KPN +T+
Sbjct: 600 LRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTY 659

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +I        +     +  +M E+G + N VT S  I G  K     SA  +  +M  
Sbjct: 660 NTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEN 719

Query: 126 NN 127
           +N
Sbjct: 720 DN 721


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 1/218 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +D A+ LF ++ D    P + TY  +I   C   R  EA+ L +++    +KPN  T
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T+LID+ C + +++ A  +  +MLEKG   NV+TY+ LI+GY K   ++ A DV E M 
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             N+ PN  +Y+ LI G CKR +  +A+   +  L+  +LPDVVTY  LI G C++G   
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L   M   G++PD    +++ D   +S   +E C
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 116/208 (55%), Gaps = 1/208 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A K+F ++  +G   + + Y  +I G C   R+DEA+ LF K+      P   T+T+
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C   R  +A  +  +M EKG K N+ TY+ LID       ++ A ++  +M E  
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+++Y+ LI+G CKRG++E+AL         +L P+  TY  LI+GYCK     +AM
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAM 447

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            + + ML   ++PD +  ++L D   +S
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRS 475



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 108/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + D+A +L   + DRGL PD  TY ++I   C   R++EA  LF+ L    + PN + +T
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYT 536

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CK G++++A +M  KML K    N +T++ LI G      +K A  + E+M + 
Sbjct: 537 ALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKI 596

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++ P + + +ILI  L K G  + A   F   L +   PD  TY   I+ YC+ GR  +A
Sbjct: 597 DLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDA 656

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             +   M  NG+ PD    S+L
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSL 678



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 36/234 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +C L+ A +L GQ+ ++GL P++ITYN +I GYC    +++A+ + E +    L+PN
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPN 427

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---- 117
           + T+  LI  +CK   +  A  + +KMLE+    +VVTY+ LIDG  +S N  SA+    
Sbjct: 428 TRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 118 -------------------------------DVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                          D+++ + + ++ PN+V Y+ LIDG CK G
Sbjct: 487 LMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAG 546

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            + EA       L  + LP+ +T+  LI G C  G+  EA  L + M++  + P
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 107/195 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A +    + + GL+PD  TY ++I GYC    LD A ++F+++     + N + +T
Sbjct: 233 NVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYT 292

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C E R+D+A  +F KM +      V TY+ LI     S+    A ++ +EM E 
Sbjct: 293 HLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEK 352

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PNI +Y++LID LC +  +E+A       L+  L+P+V+TY  LI GYCK G   +A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412

Query: 187 MQLYDSMLRNGIMPD 201
           + + + M    + P+
Sbjct: 413 LDVVELMESRNLRPN 427



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A+ +  ++ +R + PD++TYN++I G C     D A +L   +    L P+  T+T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYT 501

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID+ CK  R+++A  +F  + +K    NVV Y+ LIDGY K+  +  A  + E+M   
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN ++++ LI GLC  G ++EA       +   L P V T  ILI    K G    A
Sbjct: 562 NCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHA 621

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            + +  ML +G  PD    +T 
Sbjct: 622 YRRFQQMLSSGTKPDAHTYTTF 643



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 100/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF  L  + + P+++ Y  +I GYC   +++EA  + EK+      PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+TF  LI   C +G++ +AT++  KM++   +  V T + LI    K  +   A+  ++
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +   P+  +Y+  I   C+ G +++A        +N + PD+ TY+ LI+GY   G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R   A  +   M   G  P
Sbjct: 687 RTNSAFVVLKRMHDTGCEP 705



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 97/181 (53%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YNT++        +DE  Q++ ++   ++ PN  T+  +++ +CK G +++A    S ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           E G   +  TY+ LI GY + +++ SAF V++EM       N V+Y+ LI GLC    ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA+  F    D+   P V TY +LI+  C + R +EA+ L   M   GI P+    + L 
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 210 D 210
           D
Sbjct: 366 D 366



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E HL     +  ++  +   P+ +T+N +I G C+  +L EA  L EK+  + L+P  
Sbjct: 548 VNEAHL-----MLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T TILI    K+G  D A   F +ML  G K +  TY+  I  Y +   ++ A D+  +
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR------- 175
           M EN +SP++ +YS LI G    G    A        D    P   T+  LI+       
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 176 GYCKAGRPTE-----------AMQLYDSMLRNGIMPDG 202
           G  K G P              ++L + M+ +G+ P+ 
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNA 760



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D A + F Q+   G +PD  TY T I  YC   RL +A  +  K+    + P+
Sbjct: 612 LLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPD 671

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA----- 116
             T++ LI  +   GR + A ++  +M + G + +  T+  LI    + +  K       
Sbjct: 672 LFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPG 731

Query: 117 ---------FDVY----EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNH 162
                    FD+     E+M E+ ++PN  SY  L+ G+C+ G +  A   F H      
Sbjct: 732 VCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEG 791

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           + P  + +  L+   CK  +  EA ++ D M+  G +P
Sbjct: 792 ISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLP 829



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFT 66
            D  ++L  ++ + G+ P+  +Y  ++ G C +  L  A ++F+ +   + + P+ + F 
Sbjct: 741 FDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFN 800

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   CK  + ++A  +   M+  G    + +   LI   +K    +    V++ + + 
Sbjct: 801 ALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQC 860

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
               + +++ I+IDG+ K+GL+E     F+    N       TY++LI G
Sbjct: 861 GYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 72/136 (52%), Gaps = 1/136 (0%)

Query: 7   HLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           +L  A K+F  +  + G+ P  + +N ++   C L + +EA ++ + + CV   P   + 
Sbjct: 775 NLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESC 834

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            ILI    K+G  +  T +F  +L+ G   + + +  +IDG  K   +++ ++++  M +
Sbjct: 835 KILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894

Query: 126 NNISPNIVSYSILIDG 141
           N  + +  +YS+LI+G
Sbjct: 895 NGCTFSSQTYSLLIEG 910



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 54/248 (21%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A  +  ++ + G+ PD+ TY+++I GY  L R + A  + +++     +P+  
Sbjct: 649 REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQH 708

Query: 64  TFTILIDAFC--KEGRM----------------DDATMMFSKMLEKGPKANVVTYSCLID 105
           TF  LI      K G++                D    +  KM+E G   N  +Y  L+ 
Sbjct: 709 TFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLML 768

Query: 106 GYFKSQNMKSAFDVYEEMCENN-ISPN--------------------------------- 131
           G  +  N++ A  V++ M +   ISP+                                 
Sbjct: 769 GICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHL 828

Query: 132 --IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
             + S  ILI  L K+G  E     F   L      D + + I+I G  K G      +L
Sbjct: 829 PQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYEL 888

Query: 190 YDSMLRNG 197
           ++ M +NG
Sbjct: 889 FNVMEKNG 896


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++   GL     TYN +ICGYC    L EA+ L+E++    + P 
Sbjct: 282 LSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPT 341

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +   ++  FCKEG+M DA    S ML+K    ++++Y+ LI G+ +  N+  AF + +
Sbjct: 342 VASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLD 401

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+   N+S NIV+Y+ LIDGLC+ G +E AL      ++  + PDVVTY +L+ G CK G
Sbjct: 402 ELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLG 461

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A + +D ML  G+ PD
Sbjct: 462 NMLMAKEFFDEMLHVGLAPD 481



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 5/210 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL  ++  +G  PD+ITYN  + G C L  L+EA +L +K+      P+ +T+T  + 
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + G + +   +F  ML +G    VVTY+ LI  +  +  +  A   + EM E  + P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y++LI+G CK   M++A   F    +  + P+  TY ILI   C  G+  EA++LY
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680

Query: 191 DSMLRNGIMPD----GLLLSTL-ADYNLQS 215
             ML   I PD    G LL  L  DY +Q+
Sbjct: 681 AQMLGKRIRPDSCTHGALLKKLDKDYKVQA 710



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 114/217 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A +    +  + L PDII+YNT+I G+C L  + EA  L ++L    L  N +
Sbjct: 354 KEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIV 413

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID  C+ G ++ A  +   M+ +G   +VVTY+ L++G  K  NM  A + ++EM
Sbjct: 414 TYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM 473

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P+  +Y+  I G  K G   +A       L     PDV+TY + + G CK G  
Sbjct: 474 LHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNL 533

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA +L   M+R+G +PD +  ++    ++++   +E
Sbjct: 534 EEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLRE 570



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  AL L+ ++  RG+ P + ++NTI+ G+C   ++ +A Q    +    L P+ I
Sbjct: 319 KKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDII 378

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  LI  FC+ G + +A ++  ++  +    N+VTY+ LIDG  +  ++++A  + E+M
Sbjct: 379 SYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDM 438

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y++L++G CK G M  A   F   L   L PD   Y   I G  K G  
Sbjct: 439 INRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDT 498

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L + ML  G  PD
Sbjct: 499 AKAFKLQEEMLTKGFPPD 516



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL+++  + + G+ P + TYNT++  +C    +  A+ L  K+      P+ +TF +
Sbjct: 218 LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+   K+G +  A  +  +M + G + +  TY+ LI GY K   +  A  ++EEM    
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP + S++ ++ G CK G M +A       L  +L+PD+++Y  LI G+C+ G   EA 
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L D +    +  + +  +TL D
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLID 420



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 116/248 (46%), Gaps = 35/248 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS----- 62
           L+ ALKL   + +RG+ PD++TY  ++ G C L  +  A + F+++  V L P+      
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487

Query: 63  ------------------------------ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
                                         IT+ + ++  CK G +++A  +  KM+  G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              + VTY+  +  + ++ +++   +++ +M     +P +V+Y++LI      G ++ A+
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAM 607

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
             F    +  ++P+V+TY +LI G+CK  +  +A + +  M   GI P+    + L + N
Sbjct: 608 AYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINEN 667

Query: 213 LQSSGSQE 220
                 QE
Sbjct: 668 CNMGKWQE 675



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 105/197 (53%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L +F ++      PD+   N I+      N L +A++++  +    ++P   T+  ++ +
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           FCK G +  A  +  KM E+G   + VT++ LI+G  K   ++ A  + +EM +  +  +
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +Y+ LI G CK+GL+ EAL  +   +   + P V ++  ++ G+CK G+ ++A Q   
Sbjct: 307 PYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLS 366

Query: 192 SMLRNGIMPDGLLLSTL 208
            ML+  +MPD +  +TL
Sbjct: 367 DMLKKNLMPDIISYNTL 383


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 122/216 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  ALK+  ++  RG   D++TYNT + G C      +A  LF ++    + P+  TFT 
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +CK+G MD A  +F  M+    K + VTY+ LIDG+ K+  M  A +++++M   +
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+ +SY  +++G C  GL+ EAL      L+  + P++VT   LI+GYC++G   +A 
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +    M+ NGI+PD    +TL D  L+ +  ++  I
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 1   MLIKECHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +L++ C  D    A ++F +++ RG+ PD+++++++I        L +A+  F ++    
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+++ +TILID FC+ G + DA  M  +ML +G   +VVTY+  ++G  K +    A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ EM E  + P+  +++ LI G CK G M++AL  F   +  +L PD VTY  LI G+
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CKAG    A +L+D M+R  I+PD +   T+
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578



 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 125/252 (49%), Gaps = 36/252 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   DA + LF ++ +RG+ PD  T+ T+I GYC    +D+A+ LFE +    LKP+ +
Sbjct: 480 KKMFADADM-LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538

Query: 64  TFTILIDAFCKEGRMDDATMMF-----------------------------------SKM 88
           T+  LID FCK G M  A  ++                                    +M
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           LEKG + N+VT + LI GY +S +M  A++   +M  N I P+  SY+ LIDG  K   +
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANL 658

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A    +      L  +++TY +++ G+C  G+  EA Q+   M+  GI PDG   S+L
Sbjct: 659 EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718

Query: 209 ADYNLQSSGSQE 220
            + ++     +E
Sbjct: 719 INGHVSQDNMKE 730



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 116/208 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +  HL  AL  F ++   G+ PD + Y  +I G+C    L +A+++ +++       
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+   ++  CK+    DA M+F++M+E+G   +  T++ LI GY K  NM  A +++
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M   N+ P+ V+Y+ LIDG CK G M  A   +   +   ++PD ++Y  ++ G+C +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA+ L D ML  GI P+ +  +TL
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTL 613



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 114/202 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  +  ++   GL P+  TYNT++   C  + + EA ++F++++   + P+ ++F+ L
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I    + G +  A M F +M   G   + V Y+ LIDG+ ++  +  A  + +EM     
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++V+Y+  ++GLCK+ +  +A   F+  ++  ++PD  T+  LIRGYCK G   +A+ 
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L+++M+R  + PD +  +TL D
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLID 545



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   +  +     +  +G+  DI+TYNT+I  YC    ++EA QL    +   ++P 
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++   CK G+ D A  +  +ML+ G   N  TY+ L+    +  N+  A ++++
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFD 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++VS+S LI  L + G + +AL  F     + ++PD V Y ILI G+C+ G
Sbjct: 387 EMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNG 446

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A+++ D ML  G   D +  +T 
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYNTF 473



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +D A +++G++   G+E ++ T N ++   C   + +  +     +    +  +
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+A+C+EG +++A  + +    +G +  ++TY+ ++ G  K      A DV  
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++PN  +Y+ L+  +C+R  + EA   F       +LPD+V+++ LI    + G
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+  +  M R+GI+PD ++ + L D
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILID 440



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 97/194 (50%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  L  +G+   I   N ++ G      +D A +++ ++    ++ N  T  I+++A CK
Sbjct: 210 FQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK 269

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           + + ++     S M  KG  A++VTY+ LI+ Y +   ++ AF +        + P +++
Sbjct: 270 DRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLT 329

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ ++ GLCK G  + A       L   L P+  TY  L+   C+     EA +++D M 
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389

Query: 195 RNGIMPDGLLLSTL 208
           R G++PD +  S+L
Sbjct: 390 RRGVLPDLVSFSSL 403



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)

Query: 47  VQLFEKL--TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           V++ E L  TC       + + +L+  + +  ++ + +  F  +  KG   ++   + L+
Sbjct: 170 VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLL 229

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  ++  +  A+++Y E+    I  N+ + +I+++ LCK    E  ++         + 
Sbjct: 230 GGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVF 289

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            D+VTY  LI  YC+ G   EA QL +S    G+ P GLL
Sbjct: 290 ADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEP-GLL 328



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE +L+ A  L  ++  RGL+ +IITYN I+ G+C+  ++ EA Q+  K+  + + P+ 
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            T++ LI+    +  M +A     +ML++G
Sbjct: 713 ATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 112/193 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+      + L   L +RG   +   Y+T+I G     + +EA+ L++K+     +PN
Sbjct: 322 LVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPN 381

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LID  C+EG++D+A  +  +M+ KG   N  TYS LI G+FK+ N + A  V++
Sbjct: 382 IVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWK 441

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +NN  PN + YS+LI GLC+ G + EA+  +   L   L PDVV Y+ +I G C AG
Sbjct: 442 EMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 501

Query: 182 RPTEAMQLYDSML 194
                ++L++ ML
Sbjct: 502 SVEVGLKLFNEML 514



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KL   +  +G  P+ +TYNTII G C   +LD+AV L +++   +  PN
Sbjct: 252 LCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 311

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K+GR  D   + S + E+G  AN   YS LI G FK +  + A  +++
Sbjct: 312 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 371

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    PNIV YS LIDGLC+ G ++EA       ++    P+  TY+ LI+G+ K G
Sbjct: 372 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 431

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A++++  M +N  +P+ +  S L
Sbjct: 432 NSQKAIRVWKEMAKNNCVPNEICYSVL 458



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++F ++  +  EPD+ TY T++ G C  +R+DEAV L +++      P+S+TF +
Sbjct: 188 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 247

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  CK+G M   T +   M  KG   N VTY+ +I+G      +  A  + + M  + 
Sbjct: 248 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 307

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V+Y  LI+GL K+G   + ++      +     +   Y+ LI G  K  +  EAM
Sbjct: 308 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 367

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  M+  G  P+ ++ S L D
Sbjct: 368 GLWKKMVEKGCQPNIVVYSALID 390



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 116/222 (52%), Gaps = 2/222 (0%)

Query: 1   MLIKECHLDAALKLF--GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           ++I+E     AL+ +  G      + P+++++N +I   C L  +D A+++F ++   + 
Sbjct: 144 VIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKC 203

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  T+  L+D  CKE R+D+A ++  +M  +G   + VT++ LI+G  K  +M     
Sbjct: 204 EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 263

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + + M      PN V+Y+ +I+GLC +G +++A+      + +  +P+ VTY  LI G  
Sbjct: 264 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 323

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           K GR  + + L  S+   G   +    STL     +   S+E
Sbjct: 324 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 110/196 (56%), Gaps = 3/196 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD A ++  ++ ++G  P+  TY+++I G+       +A+++++++      PN
Sbjct: 392 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 451

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +++LI   C++G++ +A MM++ ML +G + +VV YS +I G   + +++    ++ 
Sbjct: 452 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFN 511

Query: 122 EMC--ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC- 178
           EM   E++  P++V+Y+IL+  LCK+  +  A+   +  LD    PD++T  I +     
Sbjct: 512 EMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALRE 571

Query: 179 KAGRPTEAMQLYDSML 194
           K   P +  +  D ++
Sbjct: 572 KLNPPQDGREFLDELV 587



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T+ ++I  Y +        Q+F+++   +       F ++  A+ K    + A  +F +M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 89  LEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC----ENNISPNIVSYSILIDGLC 143
           +++   +  V +++ +++   +      A + YE  C    + NISPN++S++++I  +C
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE--CGVGGKTNISPNVLSFNLVIKAMC 183

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K GL++ A+  F         PDV TY  L+ G CK  R  EA+ L D M   G  P  +
Sbjct: 184 KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV 243

Query: 204 LLSTLAD 210
             + L +
Sbjct: 244 TFNVLIN 250



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 23/166 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LK 59
           L ++  L  A+ ++  +  RGL PD++ Y+++I G C+   ++  ++LF ++ C +   +
Sbjct: 462 LCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQ 521

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG------------- 106
           P+ +T+ IL+ A CK+  +  A  + + ML++G   +++T +  ++              
Sbjct: 522 PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGRE 581

Query: 107 --------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                     K Q +  A  + E M +  + PN  ++  +I  LCK
Sbjct: 582 FLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K    TF  LI+ +   G       +F +M  +        +  +   Y K+   + A +
Sbjct: 61  KSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIE 120

Query: 119 VYEEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIR 175
           ++  M  E      + S++ +++ + + GL   AL  + C +    ++ P+V+++ ++I+
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 180

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             CK G    A++++  M      PD     TL D
Sbjct: 181 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMD 215


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  L  A +L  ++  RG+ PD +TY ++I G+C  N+LD+A  + + +      PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+ +CK   +DD   +F KM  +G  A+ VTY+ LI G+ +   ++ A ++++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+IVSY IL+DGLC  G  E+AL  F     + +  D+  Y I+I G C A 
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A  L+ S+   G+ PD
Sbjct: 507 KVDDAWDLFCSLPLKGVKPD 526



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A  LF ++  +G + DII Y T+I G+C   R D+  +L   +   ++ P+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ LID F KEG++ +A  +  +M+++G   + VTY+ LIDG+ K   +  A  + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNI +++ILI+G CK  L+++ L  F       ++ D VTY  LI+G+C+ G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A +L+  M+   + PD
Sbjct: 437 KLEVAKELFQEMVSRRVRPD 456



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 109/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A    G++   G EPD +T++T+I G C   R+ EA++L +++  +  KP  IT  
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C  G++ DA ++  +M+E G + N VTY  ++    KS     A ++  +M E 
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I  + V YSI+IDGLCK G ++ A   F+         D++ Y  LIRG+C AGR  + 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   M++  I PD +  S L D
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALID 325



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 110/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L  ++ +R ++ D + Y+ II G C    LD A  LF ++     K + I +T LI 
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  GR DD   +   M+++    +VV +S LID + K   ++ A ++++EM +  ISP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ LIDG CK   +++A +     +     P++ T+ ILI GYCKA    + ++L+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G++ D +  +TL
Sbjct: 411 RKMSLRGVVADTVTYNTL 428



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 122/213 (57%), Gaps = 4/213 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  L+LF +++ RG+  D +TYNT+I G+C L +L+ A +LF+++   +++P+ +++ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  C  G  + A  +F K+ +   + ++  Y+ +I G   +  +  A+D++  +    
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+I+I GLCK+G + EA   F    ++   P+  TY ILIR +   G  T++ 
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582

Query: 188 QLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
           +L + + R G   D     +++  L+D  L+ S
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKS 615



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 110/206 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+L  ++ + G +P +IT N ++ G C   ++ +AV L +++     +PN +T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++   CK G+   A  +  KM E+  K + V YS +IDG  K  ++ +AF+++ EM 
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                 +I+ Y+ LI G C  G  ++        +   + PDVV ++ LI  + K G+  
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA +L+  M++ GI PD +  ++L D
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLID 360



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L L  Q+  +G+  ++ T + +I   C   +L  A     K+  +  +P+++TF+ L
Sbjct: 89  DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C EGR+ +A  +  +M+E G K  ++T + L++G   +  +  A  + + M E   
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN V+Y  ++  +CK G    A+       +  +  D V Y+I+I G CK G    A  
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L++ M   G   D ++ +TL
Sbjct: 269 LFNEMEIKGFKADIIIYTTL 288



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 98/202 (48%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF ++T     P +I ++ +        + D  + L +++    +  N  T +I+
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C+  ++  A     K+++ G + + VT+S LI+G      +  A ++ + M E   
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P +++ + L++GLC  G + +A+      ++    P+ VTY  +++  CK+G+   AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   M    I  D +  S + D
Sbjct: 234 LLRKMEERKIKLDAVKYSIIID 255



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF  L  +G++PD+ TYN +I G C    L EA  LF K+      PN  T+ 
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           ILI A   EG    +  +  ++   G   +  T   ++D     +  KS  D+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 115/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G +PD+ TY+ +I G C  +++DEA +LF+++    L PN 
Sbjct: 182 IKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK G++D A  ++ ++L +G   +++TY+ LI G+ K  ++K   D+ +E
Sbjct: 242 VTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       ++ ++  D V Y  LI G CK GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 SVDAEKMLREMLSVGLKPD 380



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL+P ++++NT++ GY  +  LDE  +L   +     +P+  
Sbjct: 148 KEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD+A  +F +MLEKG   N VT++ LIDG+ K+  +  A ++Y+++
Sbjct: 208 TYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQI 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +SP++++Y+ LI G CK+G +++            L PD +TY  LI G CK G  
Sbjct: 268 LSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M+   I  D ++ + L
Sbjct: 328 ETAFEYRKKMIEENIRLDDVVYTAL 352



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ ++GL P+ +T+ T+I G+C   +LD A+++++++    L P+
Sbjct: 216 LCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI  FCK+G +     +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E NI  + V Y+ LI GLCK G   +A       L   L PD  TY I++  +CK G
Sbjct: 336 KMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVNTGSKLLKEMQRDGHVP 414



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   LKP+
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + K G +D+   + + M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 171 VVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G+CK G
Sbjct: 231 EMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +   L D M   G+ PD +  +TL D
Sbjct: 291 DLKQTRDLIDEMSMKGLKPDKITYTTLID 319



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 72/131 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L     L  +++ +GL+PD ITY T+I G C    L+ A +  +K+    ++ + +
Sbjct: 288 KKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDV 347

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI   CKEGR  DA  M  +ML  G K +  TY+ +++ + K+ ++ +   + +EM
Sbjct: 348 VYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEM 407

Query: 124 CENNISPNIVS 134
             +   P++V+
Sbjct: 408 QRDGHVPSVVT 418



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   F    E        T   ++D   K +  K  +  Y+E+ 
Sbjct: 69  FSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGL---------------MEEALYAFHCALDNHL------ 163
           E     ++  ++IL+   CK G                ++ ++ +F+  ++ ++      
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILD 188

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  EA +L+D ML  G++P+G+  +TL 
Sbjct: 189 EGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 122/216 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  ALK+  ++  RG   D++TYNT + G C      +A  LF ++    + P+  TFT 
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +CK+G MD A  +F  M+    K + VTY+ LIDG+ K+  M  A +++++M   +
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+ +SY  +++G C  GL+ EAL      L+  + P++VT   LI+GYC++G   +A 
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +    M+ NGI+PD    +TL D  L+ +  ++  I
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 1   MLIKECHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +L++ C  D    A ++F +++ RG+ PD+++++++I        L +A+  F ++    
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+++ +TILID FC+ G + DA  M  +ML +G   +VVTY+  ++G  K +    A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ EM E  + P+  +++ LI G CK G M++AL  F   +  +L PD VTY  LI G+
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CKAG    A +L+D M+R  I+PD +   T+
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 125/252 (49%), Gaps = 36/252 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   DA + LF ++ +RG+ PD  T+ T+I GYC    +D+A+ LFE +    LKP+ +
Sbjct: 480 KKMFADADM-LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538

Query: 64  TFTILIDAFCKEGRMDDATMMF-----------------------------------SKM 88
           T+  LID FCK G M  A  ++                                    +M
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           LEKG + N+VT + LI GY +S +M  A++   +M  N I P+  SY+ LIDG  K   +
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANL 658

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A    +      L  +++TY +++ G+C  G+  EA Q+   M+  GI PDG   S+L
Sbjct: 659 EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718

Query: 209 ADYNLQSSGSQE 220
            + ++     +E
Sbjct: 719 INGHVSQDNMKE 730



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 116/208 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +  HL  AL  F ++   G+ PD + Y  +I G+C    L +A+++ +++       
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+   ++  CK+    DA M+F++M+E+G   +  T++ LI GY K  NM  A +++
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M   N+ P+ V+Y+ LIDG CK G M  A   +   +   ++PD ++Y  ++ G+C +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA+ L D ML  GI P+ +  +TL
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTL 613



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 114/202 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  +  ++   GL P+  TYNT++   C  + + EA ++F++++   + P+ ++F+ L
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I    + G +  A M F +M   G   + V Y+ LIDG+ ++  +  A  + +EM     
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++V+Y+  ++GLCK+ +  +A   F+  ++  ++PD  T+  LIRGYCK G   +A+ 
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L+++M+R  + PD +  +TL D
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLID 545



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   +  +     +  +G+  DI+TYNT+I  YC    ++EA QL    +   ++P 
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++   CK G+ D A  +  +ML+ G   N  TY+ L+    +  N+  A ++++
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFD 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++VS+S LI  L + G + +AL  F     + ++PD V Y ILI G+C+ G
Sbjct: 387 EMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNG 446

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A+++ D ML  G   D +  +T 
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYNTF 473



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +D A +++G++   G+E ++ T N ++   C   + +  +     +    +  +
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFAD 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+A+C+EG +++A  + +    +G +  ++TY+ ++ G  K      A DV  
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++PN  +Y+ L+  +C+R  + EA   F       +LPD+V+++ LI    + G
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNG 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+  +  M R+GI+PD ++ + L D
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILID 440



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 97/194 (50%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  L  +G+   I   N ++ G      +D A +++ ++    ++ N  T  I+++A CK
Sbjct: 210 FQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK 269

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           + + ++     S M  KG  A++VTY+ LI+ Y +   ++ AF +        + P +++
Sbjct: 270 DRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLT 329

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ ++ GLCK G  + A       L   L P+  TY  L+   C+     EA +++D M 
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389

Query: 195 RNGIMPDGLLLSTL 208
           R G++PD +  S+L
Sbjct: 390 RRGVLPDLVSFSSL 403



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)

Query: 47  VQLFEKL--TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           V++ E L  TC       + + +L+  + +  ++ + +  F  +  KG   ++   + L+
Sbjct: 170 VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLL 229

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  ++  +  A+++Y E+    I  N+ + +I+++ LCK    E  ++         + 
Sbjct: 230 GGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVF 289

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            D+VTY  LI  YC+ G   EA QL +S    G+ P GLL
Sbjct: 290 ADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEP-GLL 328



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE +L+ A  L  ++  RGL+ +IITYN I+ G+C+  ++ EA Q+  K+  + + P+ 
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            T++ LI+    +  M +A     +ML++G
Sbjct: 713 ATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 135 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 194

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 255 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDL 314

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 315 DSAFEHRKRMIQENIRLDEVAYTAL 339



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKE 293

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 294 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 353

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 354 KMLREMLNVGLKPD 367



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 203 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 262

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  K  K + +TY+ LIDG  K  ++ SAF+  +
Sbjct: 263 LITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRK 322

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L+  L PD  TY ++I  +CK G
Sbjct: 323 RMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKG 382

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 383 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 412



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 98  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 158 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 217

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 218 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 277

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M    + PD +  +TL D
Sbjct: 278 DLKQAHHLIDEMSMKELKPDKITYTTLID 306



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 55  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 114

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 115 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 174

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L  +ML +G+ PD    S L
Sbjct: 175 DEGFRLKSAMLASGVQPDVYTYSVL 199


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 110/191 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+ G +  +G  P ++ +N +I G+C    LD A +L E +      PN  TFTI
Sbjct: 165 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 224

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK  R+ +A  +  KM+  G   NVVTYS +I+G  K   +  A+++++ M   N
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ILIDGLCK   +EEA   +H   +    PD++TY  LI G CK+ +  EA 
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344

Query: 188 QLYDSMLRNGI 198
           QL+ ++  +G+
Sbjct: 345 QLFQTIPESGV 355



 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 114/195 (58%), Gaps = 1/195 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A KL   + ++G  P++ T+  +I G C  NR+ EA QL EK+      PN +T++ 
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK+G++DDA  +F  M  +    NVVT++ LIDG  K++ ++ A  +Y  M E  
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL-LPDVVTYAILIRGYCKAGRPTEA 186
            +P+I++Y+ LIDGLCK   ++EA   F    ++ +   + VTY+ L  GY   GR  +A
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379

Query: 187 MQLYDSMLRNGIMPD 201
            +++  ++  G  PD
Sbjct: 380 CRIFSMLVDKGFSPD 394



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 116/245 (47%), Gaps = 36/245 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---------- 51
           L K    D A  +  ++  RG  PD +T++T+I G C     ++A ++ E          
Sbjct: 88  LCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS 147

Query: 52  -------------KLTCVQLK-------------PNSITFTILIDAFCKEGRMDDATMMF 85
                        K   V+L              P  + F ++I+ FCK   +D A  + 
Sbjct: 148 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 207

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M+EKG   NV T++ LI G  K+  +  A  + E+M     SPN+V+YS +I+GLCK+
Sbjct: 208 EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQ 267

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +++A   F      +  P+VVT+ ILI G CKA R  EA QLY  M   G  PD +  
Sbjct: 268 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 327

Query: 206 STLAD 210
           ++L D
Sbjct: 328 NSLID 332



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L  ++   G  P+++TY+T+I G C   ++D+A +LF+ +      PN
Sbjct: 229 LCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 288

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  ILID  CK  R+++A  ++ +M E G   +++TY+ LIDG  KS  +  AF +++
Sbjct: 289 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348

Query: 122 EMCENNIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + E+ +S  N V+YS L  G    G M +A   F   +D    PD+ TY  LI  YCK 
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 408

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            R  E ++L + M   G  P
Sbjct: 409 SRAVEVVELVEEMASKGFPP 428



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 37/237 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++L  ++   G E + + + T++ G C   R+ EA++ F  +      P+ +T+T 
Sbjct: 25  LDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTA 83

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A CK G+ D+A  M  +M+ +G   + VT+S LIDG  K  + + AF V E++ +  
Sbjct: 84  LVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 143

Query: 128 I------------------------------------SPNIVSYSILIDGLCKRGLMEEA 151
           +                                    +P ++ ++++I+G CK   ++ A
Sbjct: 144 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 203

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                  ++   +P+V T+ ILI G CKA R  EA QL + M+  G  P+ +  ST+
Sbjct: 204 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 3/198 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL---TCVQLKPNSI 63
           H + A++LF  +  RG   D + YN ++ G    ++ ++A+ + E++      +  P+S 
Sbjct: 445 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSS 504

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
               L+++ C+ GR DDA  +  KM E+G  A V +Y+ L+ G  + Q    A  V+E M
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                +P I + +++I  LC    +++A             PD+ T   LI GYCK+GR 
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 624

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A +L + M   G+ P+
Sbjct: 625 DLARKLLEEMTEAGLEPN 642



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 4/200 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEP-DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +D A +LF  + + G+   + +TY+T+  GY +L R+ +A ++F  L      P
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+T LI  +CK  R  +   +  +M  KG    V T S ++ G F+  + + A  ++
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRGY 177
           + M     + + + Y+++++G+ +     +AL      +D       P       L+   
Sbjct: 454 DSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESL 513

Query: 178 CKAGRPTEAMQLYDSMLRNG 197
           C+ GR  +A QL   M   G
Sbjct: 514 CQVGRTDDAKQLLHKMSERG 533



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 2/126 (1%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           N  TY  LI G+  + ++  A  + EEM  N    N V ++ L+ GLC  G + EAL  F
Sbjct: 8   NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
             A+     PDV+TY  L+   CKAG+  EA  +   M+  G  PD +  STL D  L  
Sbjct: 68  R-AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID-GLCK 125

Query: 216 SGSQEH 221
            GS+E 
Sbjct: 126 FGSEEQ 131



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +L  ++++RG    + +YN ++ G   L R DEA Q+FE +      P   T  ++
Sbjct: 520 DDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 579

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C   ++DDA  +  +M + G   ++ T + LI GY KS     A  + EEM E  +
Sbjct: 580 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 639

Query: 129 SPNIVSYSIL 138
            PN  ++ +L
Sbjct: 640 EPNDTTHDLL 649



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 38/229 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  L D+G  PD+ TY ++I  YC  +R  E V+L E++      P   T + ++ 
Sbjct: 379 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 438

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE-------- 122
              +    + A  +F  M  +G   + + Y+ +++G  ++     A  V E+        
Sbjct: 439 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRK 498

Query: 123 ------------------------------MCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                                         M E   +  + SY+ L+ GL +    +EA 
Sbjct: 499 FNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEAT 558

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             F   +     P++ T  ++I   C A +  +A +L   M + G  PD
Sbjct: 559 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 607



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L     +D A +L  +++  G  PDI T NT+I GYC   R D A +L E++T   L+PN
Sbjct: 583 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 642

Query: 62  SITFTIL 68
             T  +L
Sbjct: 643 DTTHDLL 649


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 117/198 (59%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+  ++  RG+ PD + Y T+I G+C L     A +LF ++   ++ P+SI F+ LI   
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
              G++ +A  +F++M++KG + + VTY+ LIDGY K   MK AF ++ +M +  ++PN+
Sbjct: 261 SGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y+ L DGLCK G ++ A    H      L  ++ TY  ++ G CKAG   +A++L + 
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   G+ PD +  +TL D
Sbjct: 381 MKEAGLHPDTITYTTLMD 398



 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 117/213 (54%), Gaps = 9/213 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF ++  +G EPD +TY  +I GYC L  + +A  L  ++  + L PN +T+T L D
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G +D A  +  +M  KG + N+ TY+ +++G  K+ N+  A  + EEM E  + P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ L+D   K G M +A       LD  L P VVT+ +L+ G C +G+  +  +L 
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL 448

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             ML  GIMP+       A YN   S  +++CI
Sbjct: 449 KWMLEKGIMPNA------ATYN---SIMKQYCI 472



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 112/202 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            AA KLF ++  R + PD I ++ +ICG     ++ EA +LF ++     +P+ +T+T L
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID +CK G M  A  + ++M++ G   NVVTY+ L DG  KS  + +A ++  EMC   +
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             NI +Y+ +++GLCK G + +A+       +  L PD +TY  L+  Y K G   +A +
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L   ML  G+ P  +  + L +
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMN 433



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E H      L  ++  +G  PD+++Y TII GYC +  L + VQL +++    LKPN 
Sbjct: 126 IREAH-----HLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNL 180

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T++ +I   CK G++ +   +  +M+++G   + V Y+ LIDG+ K  N ++A+ ++ E
Sbjct: 181 YTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE 240

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P+ +++S LI GL   G + EA   F+  +     PD VTY  LI GYCK G 
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A  L++ M++ G+ P+ +  + LAD
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALAD 328



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 111/215 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A+KL  ++ + GL PD ITY T++  Y     + +A +L  ++    L+P 
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT 424

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L++  C  G+++D   +   MLEKG   N  TY+ ++  Y    NM+ + ++Y 
Sbjct: 425 VVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYR 484

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            MC   + P+  +Y+ILI G CK   M+EA +     ++        +Y  LI+G+ K  
Sbjct: 485 GMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRK 544

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +  EA QL++ M R G++    + +   D N +  
Sbjct: 545 KLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEG 579



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 107/193 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++  +GL+ +I TYNTI+ G C    + +AV+L E++    L P+
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T L+DA+ K G M  A  +  +ML++G +  VVT++ L++G   S  ++    + +
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I PN  +Y+ ++   C R  M  +   +       ++PD  TY ILI+G+CKA 
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509

Query: 182 RPTEAMQLYDSML 194
              EA  L+  M+
Sbjct: 510 NMKEAWFLHKEMV 522



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 100/203 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   LK+F +    G+  +  +YN ++     L ++ EA  L  ++      P+ +++T 
Sbjct: 91  LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID +C  G +     +  +M  KG K N+ TYS +I    KS  +     V  EM +  
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y+ LIDG CK G  + A   F       ++PD + ++ LI G   +G+  EA 
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L++ M++ G  PD +  + L D
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALID 293



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 1/209 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNT-IICGYCSLNRLDEAVQLFEKLTCVQLK 59
           +L++   L+ A K F +L + G+     + N  + C     + L   +++F +   + + 
Sbjct: 48  VLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVC 107

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            N+ ++ IL+++  + G++ +A  +  +M  KG   +VV+Y+ +IDGY     ++    +
Sbjct: 108 WNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQL 167

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +EM    + PN+ +YS +I  LCK G + E        +   + PD V Y  LI G+CK
Sbjct: 168 VKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCK 227

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +L+  M    I+PD +  S L
Sbjct: 228 LGNTQAAYKLFSEMEAREIVPDSIAFSAL 256



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 93/184 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ DRGL+P ++T+N ++ G C   +L++  +L + +    + PN+ T+  ++ 
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C    M  +T ++  M  +G   +  TY+ LI G+ K++NMK A+ +++EM E   + 
Sbjct: 469 QYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL 528

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              SY+ LI G  KR  + EA   F       L+     Y + +    + G     ++L 
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELC 588

Query: 191 DSML 194
           D  +
Sbjct: 589 DEAI 592



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 75/145 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   +L   + ++G+ P+  TYN+I+  YC  N +  + +++  +    + P+S T+ I
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK   M +A  +  +M+EK       +Y+ LI G+FK + +  A  ++EEM    
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL 152
           +  +   Y++ +D   + G ME  L
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTL 585


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 114/210 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A  LF ++  +G+ P+I+T N+++   C+L        L  ++   ++ PN
Sbjct: 224 LCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I+ T ++DA CKEG +  A  +   M + G + +VVTY+ LIDG+     M  A  V++
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     +PN+ SY+ LI+G CK   M++A+Y F       L+P+ VTY  LI G C  G
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVG 403

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+  G +PD +    L DY
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDY 433



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 122/209 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +G  P++ +YNT+I GYC + R+D+A+ LFE++   +L PN++T+  
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F +M+  G   ++VTY  L+D   K+ ++  A  + + +  +N
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I  Y+I+IDG+C+ G +E+A   F       L P+V TY I+  G CK G   EA 
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +L+  M  N    DG   +T+    L+++
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNN 543



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +   G+EPD++TY  +I G+C  + +DEAV++F+ +      PN
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++  LI+ +CK  RMD A  +F +M  +    N VTY+ LI G      ++ A  ++ 
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFR 413

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P++V+Y IL+D LCK   +++A+        ++L PD+  Y I+I G C+AG
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +A  L+ ++   G+ P+      +  YN+ + G
Sbjct: 474 ELEDARDLFSNLSSKGLKPN------VWTYNIMTHG 503



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H  AA++L   +     +PD++ Y T+I   C   +  +A  LF ++    + PN
Sbjct: 189 LCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPN 248

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   L+ A C  G       + ++M++     N ++ + ++D   K   +  A DV +
Sbjct: 249 IVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVD 308

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++ + P++V+Y+ LIDG C R  M+EA+  F   +     P+V +Y  LI GYCK  
Sbjct: 309 MMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIE 368

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM L++ M R  ++P+ +  +TL
Sbjct: 369 RMDKAMYLFEEMCRQKLIPNTVTYNTL 395



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 104/204 (50%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G +PD++ Y T+I G C       A++L   +     +P+ + 
Sbjct: 157 EGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVV 216

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI + CK+ +   A  +FS+M+ KG   N+VT + L+         K    +  EM 
Sbjct: 217 YGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV 276

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I PN +S + ++D LCK G++ +A         + + PDVVTY  LI G+C      
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD 336

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++D M+  G  P+    +TL
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTL 360



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL+    A  +  ++   G +PD  ++ T+I G C   ++ EA+ LF+K+     +P+ 
Sbjct: 120 CHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDV 179

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +  LI+  CK G    A  +   M +   + +VV Y  LI    K +    AF+++ E
Sbjct: 180 VIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSE 239

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISPNIV+ + L+  LC  G  +      +  +D+ ++P+ ++   ++   CK G 
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A  + D M ++G+ PD +  + L D
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALID 327



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 105/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
             L L  ++   G+  ++ T N +I  +C LNR++ A  +  K+  +  +P++ +FT LI
Sbjct: 92  TVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLI 151

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C EG++ +A  +F KM+ +G + +VV Y+ LI+G  K+ +  +A  +   M + N  
Sbjct: 152 KGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQ 211

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V Y  LI  LCK     +A   F   +   + P++VT   L+   C  G       L
Sbjct: 212 PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+ + IMP+ + L+T+ D
Sbjct: 272 LNEMVDSKIMPNAISLTTVVD 292



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 1/214 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P I+ +  I+     + R    + L  K+    +  N  T  +
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R++ A  + +K+L+ G + +  +++ LI G      +  A  ++++M    
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V Y+ LI+GLCK G    A+         +  PDVV Y  LI   CK  + T+A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            L+  M+  GI P+ +  ++L  Y L + G  +H
Sbjct: 235 NLFSEMITKGISPNIVTCNSLV-YALCNLGEWKH 267



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 75/146 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K CHLD A+ L   +    L+PDI  Y  +I G C    L++A  LF  L+   LKPN
Sbjct: 434 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+    CK G +D+AT +F +M E    A+  TY+ +  G+ ++     A  + E
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L+  L   GL
Sbjct: 554 EMLARGFSCDVSTTTLLVGMLSDDGL 579



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 85/179 (47%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +N     Y   N LD+A+  F ++  +   P+ + F  ++ +  K  R      +  KM 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
             G   NV T + LI+ +     +  AF V  ++ +    P+  S++ LI GLC  G + 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EAL+ F   +     PDVV YA LI G CK G  + A++L  SM +    PD ++  TL
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTL 220


>gi|255574125|ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532604|gb|EEF34390.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 621

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 4/191 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ + G  P+  T+NT I GYC LN +D+A+ LF  ++   +KPN +T  IL+ A C
Sbjct: 182 LIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALC 241

Query: 74  KEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           K G ++DA  +  ++L+   KA  N++T + L+DG  K+ +M  A  ++  M +NN   +
Sbjct: 242 KRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMD 301

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHC-ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            V+Y++LI G C    M+ A Y++ C  L   LLPD+ TY  LI G CKAG+  EA  ++
Sbjct: 302 SVAYNVLIHGFCLTRNMKLA-YSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIH 360

Query: 191 DSMLRNGIMPD 201
           D MLR G+ PD
Sbjct: 361 DVMLRMGVAPD 371



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 4/183 (2%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RGL PDI TYNT+I G C   +L EA  + + +  + + P+ I++ I+I   C  G +  
Sbjct: 331 RGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLK 390

Query: 81  ATMMFSKMLEKG--PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           A      MLEK   P+A+V  ++ +IDG+ +  +  +AF + ++M    + PN+ +Y+ L
Sbjct: 391 ANEHLHCMLEKSMVPEAHV--WNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNAL 448

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I    K G + +A       L + L PDV+TY +LI   C AGR + A+QLY  MLR+G 
Sbjct: 449 IHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGH 508

Query: 199 MPD 201
            PD
Sbjct: 509 EPD 511



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 37/232 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLKPNSIT 64
           ++D AL LF  ++D G++P+ +T N ++   C    L++A +L  +L     + + N IT
Sbjct: 210 NVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKARVNLIT 269

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD------ 118
            TIL+D   K G M  A  ++  M +     + V Y+ LI G+  ++NMK A+       
Sbjct: 270 STILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDML 329

Query: 119 -----------------------------VYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                                        +++ M    ++P+ +SY I+I GLC RG + 
Sbjct: 330 KRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVL 389

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +A    HC L+  ++P+   + ++I G+ + G    A  + D ML  G++P+
Sbjct: 390 KANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPN 441



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 2/193 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  R ++     + +++   C   +L  A+ L  KL      P+ +T   L++  C  G 
Sbjct: 116 LAGRSVDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGD 175

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +  A  +  +MLE GP  N  T++  I GY    N+  A  ++  M ++ + PN V+ +I
Sbjct: 176 LQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNI 235

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDV--VTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           L+  LCKRGL+E+A       LD++    V  +T  IL+ G  K G   +A+ ++ +M +
Sbjct: 236 LVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQ 295

Query: 196 NGIMPDGLLLSTL 208
           N  + D +  + L
Sbjct: 296 NNTLMDSVAYNVL 308



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 78/158 (49%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + ++ + P+   +N II G+        A  + +++    + PN  T+  LI A  K G 
Sbjct: 398 MLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGN 457

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           + DA  +   ML  G   +V+TY+ LI     +  +  A  +Y EM  +   P+I++Y+ 
Sbjct: 458 IVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTE 517

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           LI GLC RG M+EA   F    +  L  D V + +LI+
Sbjct: 518 LIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPFQLLIK 555



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 68/129 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +  Q+   G+ P++ TYN +I        + +A  L + + C  L P+ IT+ +LI 
Sbjct: 426 AFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIG 485

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR+  A  ++ +ML  G + +++TY+ LI G     NMK A +++ ++    ++ 
Sbjct: 486 TACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTV 545

Query: 131 NIVSYSILI 139
           + V + +LI
Sbjct: 546 DHVPFQLLI 554



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
            GL PD+ITYN +I   C+  R+  AVQL+ ++     +P+ IT+T LI   C  G M +
Sbjct: 471 HGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKE 530

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           A  +F+K+   G   + V +  LI   F
Sbjct: 531 AKELFAKLQNTGLTVDHVPFQLLIKNTF 558


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 128/255 (50%), Gaps = 36/255 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +T RGLEPDI TY T++ G+C   R+ E+ +LF+ +  + +KP+
Sbjct: 289 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPD 348

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID  C  G+MD+AT + + M+  G K ++VTY  LI+GY +   M  A  +++
Sbjct: 349 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 408

Query: 122 EMCENNISPNIVSYSILID-----------------------------------GLCKRG 146
           EM  + +SPNI++Y+I++                                    GLCK  
Sbjct: 409 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 468

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
           L +EAL  F       L  +  T+ I+I    K GR  EA  L+ +   NG++PD    S
Sbjct: 469 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 528

Query: 207 TLADYNLQSSGSQEH 221
            +A+ NL   GS E 
Sbjct: 529 LMAE-NLIEQGSLEE 542



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 113/194 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++   +   G+ PD +TYN+I+ GYCS  +  EA+   +K+    ++PN +T++ 
Sbjct: 225 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 284

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CK GR  +A  +F  M ++G + ++ TY  L+ G+ K   +  +  +++ M    
Sbjct: 285 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIG 344

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I++Y+ LIDG C  G M+EA       +   + PD+VTY  LI GYC+  R  +A+
Sbjct: 345 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 404

Query: 188 QLYDSMLRNGIMPD 201
            L+  M+ +G+ P+
Sbjct: 405 ALFKEMVSSGVSPN 418



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 11/213 (5%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITF 65
           DA   +  ++T+ G  PD+ +YN ++ G C  NR  EA++L   +   +     P+ +++
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 66  TILIDAFCKEG--------RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             +++ F KEG         MD A  + + M++ G   + +TY+ ++ GY  S   K A 
Sbjct: 205 NTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 264

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
              ++M  + + PN+V+YS L++ LCK G   EA   F       L PD+ TY  L++G+
Sbjct: 265 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGH 324

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK GR  E+ +L+D M+R G+ PD +  +TL D
Sbjct: 325 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 357



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 107/187 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+    ++   G+EP+++TY++++   C   R  EA ++F+ +T   L+P+  T+  L+ 
Sbjct: 263 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 322

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEGR+ ++  +F  M+  G K +++TY+ LIDG   +  M  A  +   M    + P
Sbjct: 323 GHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 382

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+Y  LI+G C+   M++AL  F   + + + P+++TY I+++G     R   A +LY
Sbjct: 383 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 442

Query: 191 DSMLRNG 197
            S+ ++G
Sbjct: 443 VSITKSG 449



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 4/209 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PDI+TY T+I GYC ++R+D+A+ LF+++    + PN IT+ I
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++       R   A  ++  + + G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +     +++I+I  L K G M+EA  L+A H A  N L+PDV TY+++     + G   E
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA--NGLVPDVRTYSLMAENLIEQGSLEE 542

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
              L+ SM  NG   D  +L+++    LQ
Sbjct: 543 LDDLFLSMEENGCSADSRMLNSIVRKLLQ 571



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 11/209 (5%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGY--------CSLNRLDEAVQLFEKLTCVQLK 59
           AL+L   + D    G  PD+++YNT++ G+         +   +D+A+++   +    + 
Sbjct: 182 ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVM 241

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ +T+  ++  +C  G+  +A     KM   G + NVVTYS L++   K+     A  +
Sbjct: 242 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 301

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++ M +  + P+I +Y  L+ G CK G + E+   F   +   + PD++TY  LI G C 
Sbjct: 302 FDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 361

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           AG+  EA +L  SM+  G+ PD +   TL
Sbjct: 362 AGKMDEATKLLASMVSVGVKPDIVTYGTL 390



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 12/210 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNS 62
           +   LD      G +  +G   D IT+  ++ G C+  R  +A+ +   ++T +   P+ 
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDV 163

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFK--------SQ 111
            ++  L+   C E R  +A  +   M +    G   +VV+Y+ +++G+FK        +Q
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQ 223

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
            M  A +V   M +N + P+ ++Y+ ++ G C  G  +EA+        + + P+VVTY+
Sbjct: 224 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 283

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            L+   CK GR TEA +++DSM + G+ PD
Sbjct: 284 SLMNYLCKNGRSTEARKIFDSMTKRGLEPD 313



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 15/226 (6%)

Query: 10  AALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           AA+  + ++   G   + P + TY  +I   C   RLD        +     + ++ITFT
Sbjct: 72  AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFT 131

Query: 67  ILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            L+   C + R  DA  ++  +M E G   +V +Y+ L+ G       + A ++   M +
Sbjct: 132 PLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMAD 191

Query: 126 NN---ISPNIVSYSILIDGLCKRGL--------MEEALYAFHCALDNHLLPDVVTYAILI 174
           +      P++VSY+ +++G  K G+        M++A+   +  + N ++PD +TY  ++
Sbjct: 192 DRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 251

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            GYC +G+P EA+     M  +G+ P+ +  S+L +Y  ++  S E
Sbjct: 252 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 297



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T  G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 437 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 496

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GRMD+A  +F+     G   +V TYS + +   +  +++   D++  M EN  S
Sbjct: 497 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 556

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            +    + ++  L +RG +  A
Sbjct: 557 ADSRMLNSIVRKLLQRGDITRA 578


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 128/214 (59%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++ AL L  ++T  G+EP+IIT++T+I GYC++  +  A+ L+ ++T   + P+ +
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LIDA  KE  M +A  ++S MLE G   N  T++CL+DG++K   +  A D Y+E 
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +     N V ++ LI+GLC+ G +  A   F       + PD+ +Y  +++G+ +  R 
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           T+ M L   M++ GI+P+ L+   LA +  Q++G
Sbjct: 601 TDTMMLQCDMIKTGILPNLLVNQLLARF-YQANG 633



 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  ++ A K+F  +   G+ P++ TY+ +I GYC    + +A  L++++   +L PN
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  L+D FCK   +  A  +F  M++ G   N+  Y+CLI G+ KS NM  A  +  
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+SP++ +Y+ILI+GLC    + EA   F    +  + P   TY  LI GYCK  
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+ L   M  +G+ P+ +  STL D
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLID 452



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A  LF  +   G++P++  YN +I G+C    + EAV L  ++  + L P+  
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+  C E ++ +A  +F KM  +    +  TY+ LI GY K  NM+ A D+  EM
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PNI+++S LIDG C    ++ A+  +       ++PDVVTY  LI  + K    
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA++LY  ML  GI P+    + L D
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVD 522



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 106/181 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++    L PD+ TY  +I G C  +++ EA +LF+K+   ++ P+S T+  LI 
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CKE  M+ A  + S+M   G + N++T+S LIDGY   +++K+A  +Y EM    I P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ LID   K   M+EAL  +   L+  + P+  T+A L+ G+ K GR + A+  Y
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537

Query: 191 D 191
            
Sbjct: 538 Q 538



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 5/209 (2%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++T  G++P++  Y   I   C  N+++EA ++FE +    + PN  T++ +ID +
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK G +  A  ++ ++L      NVV +  L+DG+ K++ + +A  ++  M +  + PN+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
             Y+ LI G CK G M EA+         +L PDV TY ILI G C   +  EA +L+  
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399

Query: 193 MLRNGIMPDGLLLSTL-----ADYNLQSS 216
           M    I P     ++L      +YN++ +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQA 428



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 4/199 (2%)

Query: 13  KLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           +LF  L D +  +  I  ++ +I  +  +   +EA+ +  ++ C    P+S     +++ 
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNG 173

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             +  R D   + +  M+ +G   +V  Y  L    FK         + +EM    I PN
Sbjct: 174 LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPN 233

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +  Y+I I  LC+   MEEA   F     + +LP++ TY+ +I GYCK G   +A  LY 
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            +L   ++P+ ++  TL D
Sbjct: 294 EILVAELLPNVVVFGTLVD 312



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD     +I+ G     R D     ++ +    L P+   + +L     K+G       +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M   G K NV  Y+  I    +   M+ A  ++E M ++ + PN+ +YS +IDG CK
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G + +A   +   L   LLP+VV +  L+ G+CKA     A  L+  M++ G+ P+
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+ A K+  Q+   G+ P++ITYNT+I G+C + +L +A+ L   L    L P+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+  FC++G    A  M  +M E+G K + VTY+ LID + +S NM+ A  +  
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P++ +YS+LI G C +G M EA   F   ++ +  P+ V Y  +I GYCK G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A++L   M    + P+
Sbjct: 493 SSYRALKLLKEMEEKELAPN 512



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 120/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A ++F ++ +RG+  +I+TYNT+I G C   +L+EA ++ +++    + PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID FC  G++  A  +   +  +G   ++VTY+ L+ G+ +  +   A  + +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I P+ V+Y+ILID   +   ME+A+       +  L+PDV TY++LI G+C  G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA +L+ SM+     P+ ++ +T+
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTM 484



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 10/221 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LIK C     ++ +  L  +LT+ G  P+++ Y T+I G C    +++A  LF ++  +
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L  N  T+T+LI+   K G       M+ KM E G   N+ TY+C+++   K    K A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V++EM E  +S NIV+Y+ LI GLC+   + EA         + + P+++TY  LI G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +C  G+  +A+ L   +   G+ P      +L  YN+  SG
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSP------SLVTYNILVSG 382



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 104/202 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   L  RGL P ++TYN ++ G+C       A ++ +++    +KP+ +T+TI
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F +   M+ A  +   M E G   +V TYS LI G+     M  A  +++ M E N
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V Y+ +I G CK G    AL       +  L P+V +Y  +I   CK  +  EA 
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
           +L + M+ +GI P   +LS ++
Sbjct: 534 RLVEKMIDSGIDPSTSILSLIS 555



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 106/185 (57%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D+ ++  +I G C    ++++  L  +LT     PN + +T LID  CK+G ++ A  +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M + G  AN  TY+ LI+G FK+   K  F++YE+M E+ + PN+ +Y+ +++ LCK 
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G  ++A   F    +  +  ++VTY  LI G C+  +  EA ++ D M  +GI P+ +  
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 206 STLAD 210
           +TL D
Sbjct: 342 NTLID 346



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 94/167 (56%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A K+  ++ +RG++P  +TY  +I  +   + +++A+QL   +  + L P+  T+++LI
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC +G+M++A+ +F  M+EK  + N V Y+ +I GY K  +   A  + +EM E  ++
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           PN+ SY  +I+ LCK    +EA       +D+ + P     +++ R 
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 73/132 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A++L   + + GL PD+ TY+ +I G+C   +++EA +LF+ +     +PN + + 
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  +CKEG    A  +  +M EK    NV +Y  +I+   K +  K A  + E+M ++
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542

Query: 127 NISPNIVSYSIL 138
            I P+    S++
Sbjct: 543 GIDPSTSILSLI 554


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 113/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A     ++ + G  PD +TYNT+I GYC    + EA +  +++    +K +S+
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++   C+E ++++A  + S   ++G   + V+Y  LI GYFK  N+  A  +++EM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+ V+Y+ +I GLC+ G  E+A+   +  L++ LLPD  TY  ++ GYC+ G  
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q ++ M+ N   PD
Sbjct: 575 EKAFQFHNKMVENSFKPD 592



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ A KL  ++ +  L PD+++YNT+I G    +++ EA +L E+++   +KPN
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T  I++  +CKEG+MDDA+   +KM E G   + VTY+ LI+GY K+ NM  AF   +
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+  + V+ + ++  LC+   +EEA      A       D V+Y  LI GY K G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A++L+D M    I+P
Sbjct: 503 NVDRALKLWDEMKEKEIIP 521



 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L   +  RGL P+  TYN ++ GYC +  L EA  + E +T   L P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LI+  C EGR+++A  +  +M       +VV+Y+ LI+G  +   +  AF + E
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + PN V+++I++   CK G M++A        ++   PD VTY  LI GYCKAG
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA +  D M R  +  D + L+T+
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTI 459



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 2/198 (1%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F      G+ P++ T+N +I GYC  N+  +AV+    +      P+++T+  ++DA CK
Sbjct: 196 FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCK 255

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           +GR+ DA  +   M  +G   N  TY+ L+ GY K   +K A +V E M +NN+ P++ +
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           Y++LI+GLC  G +EEA +     ++N  LLPDVV+Y  LI G  +  + +EA +L + M
Sbjct: 316 YNMLINGLCNEGRIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+ P+ +  + +  +
Sbjct: 375 SEKGVKPNAVTHNIMVKW 392



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+ A KL      RG   D ++Y T+I GY     +D A++L++++   ++ P+
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +I   C+ G+ + A    +++LE G   +  TY+ ++ GY +  +++ AF  + 
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M EN+  P++ + +IL+ GLC  G++E+AL  F+  +      D VTY  LI   CK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A  L   M    + PD
Sbjct: 643 RLDDAFNLLSEMEEKELGPD 662



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 3/213 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTII---CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           A ++F ++    L P+++T NT++     Y S + +  + + F     + + PN  TF I
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C E +  DA    + M +     + VTY+ ++D   K   +  A D+  +M    
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  +Y+IL+ G CK G ++EA         N+LLPDV TY +LI G C  GR  EA 
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +L D M    ++PD +  +TL +  L+ S   E
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 101/202 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K+ ++D ALKL+ ++ ++ + P  +TYN II G C   + ++A+    +L    L P+ 
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  ++  +C+EG ++ A    +KM+E   K +V T + L+ G      ++ A  ++  
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
                 + + V+Y+ LI  LCK G +++A        +  L PD  TY  +I     +GR
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678

Query: 183 PTEAMQLYDSMLRNGIMPDGLL 204
             EA +    ML  G +P  +L
Sbjct: 679 IREAEEFMSKMLEKGXLPXQVL 700



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 23/216 (10%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A+    +L + GL PD  TYNTI+ GYC    +++A Q   K+     KP+  T  IL
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C EG ++ A  +F+  + KG   + VTY+ LI    K   +  AF++  EM E  +
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD---------------------- 166
            P+  +Y+ +I  L   G + EA       L+   LP                       
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDS 719

Query: 167 -VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             V Y+  I+  C  G+  +AM+++    + GI  D
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVD 755



 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 23/164 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L+ ALKLF     +G   D +TYNT+I   C   RLD+A  L  ++   +L P+  T
Sbjct: 606 EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG-----------------------PKANVVTYS 101
           +  +I A    GR+ +A    SKMLEKG                         ++ V YS
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYS 725

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             I         K A  ++ E  +  I+ +  +Y  L+DGL KR
Sbjct: 726 EWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 122/200 (61%), Gaps = 4/200 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA++L   +  V LKPN++
Sbjct: 255 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 314

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 315 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 374

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
            E+     + +Y+I++ GLCK  L ++AL  F   C +D  L  +  T+ I+I    K G
Sbjct: 375 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL--EARTFNIMIDALLKVG 432

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L+ +   NG++P+
Sbjct: 433 RNDEAKDLFVAFSSNGLVPN 452



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 15/208 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITF 65
           DA   +  ++T+ G  P++ +YN ++ G C  NR  EA++L   +   +     P+ +++
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD------- 118
           T +I+ F KEG  D A   + +ML++G   +VVTYS +I    K Q M   +        
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRV 259

Query: 119 -----VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
                +++ M    + P+I++YS LIDG C  G M+EA+      +   L P+ VTY+ L
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 319

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           I GYCK  R  +A+ L+  M  +G+ PD
Sbjct: 320 INGYCKISRMEDALVLFKEMESSGVSPD 347



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 16/221 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNS 62
           +   LD      G +  +G   + IT+  ++ G C+  R  +A+ +   ++T +   PN 
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            ++  L++  C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  
Sbjct: 159 FSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 120 YEEMCENNISPNIVSYSILIDGL------------CKRGLMEEALYAFHCALDNHLLPDV 167
           Y EM +  I P++V+YS +I  L            CK G + E+   F   +   + PD+
Sbjct: 219 YHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDI 278

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +TY+ LI GYC AG+  EAM+L   M+  G+ P+ +  STL
Sbjct: 279 ITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 319



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 23/196 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             KE   D A   + ++ DRG+ PD++TY++II   C    +D              KP 
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMD--------------KPW 251

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S          CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  +  
Sbjct: 252 S---------HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLS 302

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN V+YS LI+G CK   ME+AL  F     + + PD++TY I+++G  +  
Sbjct: 303 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 362

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A +LY  +  +G
Sbjct: 363 RTAAAKELYVRITESG 378



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 19/220 (8%)

Query: 10  AALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           AA+  + ++   G   + PD+ TY  +I   C   RLD        +     +  +ITFT
Sbjct: 67  AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFT 126

Query: 67  ILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            L+   C + R  DA  ++  +M E G   NV +Y+ L++G       + A ++   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMAD 186

Query: 126 N---NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG------ 176
           +      P++VSY+ +I+G  K G  ++A   +H  LD  +LPDVVTY+ +I        
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQA 246

Query: 177 ------YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 +CK GR  E+ +L+D M+R G+ PD +  STL D
Sbjct: 247 MDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 286



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL   +   GL+P+ +TY+T+I GYC ++R+++A+ LF+++    + P+ IT+ I
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 353

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++ ++ E G +  + TY+ ++ G  K++    A  +++ +C  +
Sbjct: 354 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 413

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+ID L K G  +EA   F     N L+P+  TY ++       G   E  
Sbjct: 414 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 473

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           QL+ SM  NG   D  +L+ +    LQ
Sbjct: 474 QLFLSMEDNGCTVDSGMLNFIVRELLQ 500



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 7/179 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL LF ++   G+ PDIITYN I+ G     R   A +L+ ++T    +    
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I++   CK    DDA  MF  +     K    T++ +ID   K      A D++   
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 444

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF------HCALDNHLLPDVVTYAILIRG 176
             N + PN  +Y ++ + +  +GL+EE    F       C +D+ +L + +   +L RG
Sbjct: 445 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGML-NFIVRELLQRG 502



 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 6/115 (5%)

Query: 79  DDATMMFSKMLEKGPKANVVTYS-CLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVS 134
           +DA  +F ++L +G  A++   +  L D      +  +A   Y  M     + ++P++ +
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           Y ILI   C+ G ++    A    +      + +T+  L++G C   R ++AM +
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 3/219 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE + + AL+L  ++  R + P ++ Y+T+I G+   +    AV LF ++  V +  N
Sbjct: 611 LCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFN 670

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TIL+  F    +M +A  +F +M E+G   + ++Y+ LI G+  ++ MK A+ ++E
Sbjct: 671 IATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFE 730

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     SPN+++Y+ +IDG CK   ++ A + F     + ++PDVVTY +LI  Y K G
Sbjct: 731 EMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHG 790

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              +A +LYD M   G++PD +  + L    L++   QE
Sbjct: 791 YFDQAHKLYDVMKDKGVLPDDITHNVLG---LKAGTVQE 826



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 35/235 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G++   G +P ++TY+T I G C +  ++ A+ L   L       NS +F  +I 
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G + +A  +  +M   G   +V +YS LI+ +    ++    D+ EEM  + I P
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKP 459

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFH------CALD------------------------ 160
           +IVSY+ LI GLCK+ +++ A+  FH      C  D                        
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLL 519

Query: 161 -----NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                N L+P   +   LIRGY K G   +A++++++MLR+GI PD +  + + D
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILD 574



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 103/205 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +   AL L     + G   +  +YN II   C     + A++L  ++    + P+ + ++
Sbjct: 581 YFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYS 640

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F K+     A  +F++M++ G   N+ TY+ L+  +  S  M  A+ +++EM E 
Sbjct: 641 TLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKER 700

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  + +SY+ LI G C    M++A   F         P+V+TY  +I G+CK+ R   A
Sbjct: 701 GLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLA 760

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADY 211
             ++D M R+ ++PD +  + L D+
Sbjct: 761 TWVFDKMNRDSVIPDVVTYTVLIDW 785



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 4/205 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL +F      GLEPDI T N ++      NR++   ++FE+L      PN  T+TI
Sbjct: 263 LENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTI 322

Query: 68  LIDAFCK----EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ +C     +  M  A ++  K+   G K  VVTYS  I G  K  N+++A  +   +
Sbjct: 323 MMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNL 382

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N   N  S++ +I G CKRG + EAL        + +LPDV +Y+ILI  +C  G  
Sbjct: 383 HYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDV 442

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            + + L + M  + I P  +  ++L
Sbjct: 443 MKCLDLMEEMEHSQIKPSIVSYTSL 467



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 97/188 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  ++   G+ PD+ +Y+ +I  +C    + + + L E++   Q+KP+ +++T LI 
Sbjct: 410 ALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIH 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+  + +A  +F  +     K +   Y  LIDG+    +M SA  + EEM  N + P
Sbjct: 470 GLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVP 529

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              S   LI G  K GL ++AL  F+  L + + PD +    ++ G C+AG   EA+ L 
Sbjct: 530 TAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLL 589

Query: 191 DSMLRNGI 198
           +    +G 
Sbjct: 590 EDFQEHGF 597



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 99/197 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A+ +F  +     + D   Y T+I G+C    +D A++L E++ C +L P 
Sbjct: 471 LCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPT 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +   LI  + K G  D A  +F+ ML  G   + +  + ++DG  ++   K A  + E
Sbjct: 531 AFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLE 590

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  E+  + N  SY+ +I  LCK G  E AL      L  ++LP VV Y+ LI G+ K  
Sbjct: 591 DFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQS 650

Query: 182 RPTEAMQLYDSMLRNGI 198
               A+ L+  M++ GI
Sbjct: 651 NFKRAVNLFTRMVKVGI 667



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD----EAVQLFEKLTCVQ 57
           L++   ++   ++F +L DRG  P+I TY  ++  YCS    D    +A  +  K+    
Sbjct: 292 LVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSG 351

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
            KP  +T++  I   CK G ++ A M+   +       N  +++ +I G+ K   +  A 
Sbjct: 352 EKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEAL 411

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            V EEM  + I P++ SYSILI+  C +G + + L        + + P +V+Y  LI G 
Sbjct: 412 QVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGL 471

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK      A+ ++ S+  +    D  +  TL D
Sbjct: 472 CKKNMLQNAVDIFHSIGASSCKYDSTVYETLID 504



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 18/203 (8%)

Query: 11  ALKLFGQLTD--RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
             +LF    D  + +E   + ++ +I  + S + L+ A+ +F     V L+P+  T   L
Sbjct: 229 TFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFL 288

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK----SQNMKSAFDVYEEMC 124
           +    +  R++    +F ++ ++GP  N+ TY+ +++ Y         M+ A  +  ++ 
Sbjct: 289 LKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIY 348

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILIRGYC 178
            +   P +V+YS  I GLCK G +E A      L+  +  L++H   DV      I G+C
Sbjct: 349 RSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV------IYGFC 402

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           K G   EA+Q+ + M  +GI+PD
Sbjct: 403 KRGEVFEALQVLEEMKSSGILPD 425



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 97/201 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+A+KL  ++    L P   +  ++I GY  L   D+A+++F  +    + P++I    
Sbjct: 512 MDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNY 571

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D  C+ G   +A  +     E G   N  +Y+ +I    K    + A ++   M + N
Sbjct: 572 ILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN 631

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS LI G  K+   + A+  F   +   +  ++ TY IL+  +  + +  EA 
Sbjct: 632 VLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAY 691

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++  M   G+  D +  +TL
Sbjct: 692 GIFKEMKERGLCLDQISYTTL 712


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 117/207 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ AL +F  +  +G+ PDI TYN++I G C+ ++  EA  L  ++  + + P+ +
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF +L+D  CKEG++ +A  +   M E G + +VVTYS L+ GY     +  A  +++ M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++ SY+ILI+G CK   ++EA   F+  +   L P+ V+Y  LI G C+ G  
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L+ +M  NG +P+    S L D
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLD 456



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 110/195 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +LF ++  +GL P+ ++YNT+I G C L  L EA  LF+ +      PN  T++
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D FCK+G    A  +F  M     K N+V Y+ LID   KS N++ A  ++ E+   
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN   Y+ +I+GLCK GL++EAL AF    ++   PD ++Y ++IRG+      + A
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572

Query: 187 MQLYDSMLRNGIMPD 201
           +QL   M   G + D
Sbjct: 573 VQLIGEMRDKGFIAD 587



 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 122/207 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +T+ G+EPD++TY++++ GY   + + EA +LF+ +     KP+  
Sbjct: 320 KEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVF 379

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ +CK  R+D+A  +F++M+ +G   N V+Y+ LI G  +  +++ A ++++ M
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM 439

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N   PN+ +YSIL+DG CK+G   +A   F      +  P++V Y ILI   CK+G  
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A +L+  +   G+ P+  + +T+ +
Sbjct: 500 RDARKLFSELFVKGLQPNAQIYTTIIN 526



 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  +G +PD+ +YN +I GYC + R+DEA QLF ++    L PN++++  LI 
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ G + +A  +F  M   G   N+ TYS L+DG+ K      AF ++  M      P
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ILID +CK G + +A   F       L P+   Y  +I G CK G   EA++ +
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 191 DSMLRNGIMPD 201
            +M  +G  PD
Sbjct: 542 RNMEEDGCPPD 552



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 117/210 (55%), Gaps = 1/210 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  +  ++   GL+P I+T+ T+I   C + +  +A++LF+ +     +P+  T+T
Sbjct: 148 RVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYT 207

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A  +  KM E G + NVVTYS +ID + K + +  A D++  M   
Sbjct: 208 TIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK 267

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ISP+I +Y+ LI GLC     +EA    +     +++PD+VT+ +L+   CK G+ +EA
Sbjct: 268 GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEA 327

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA-DYNLQS 215
             +  +M   G+ PD +  S+L   Y+L+S
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSLRS 357



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 106/191 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF  +  RG  PD+ TY TII G C +     A  L +K+     +PN +T++ +ID
Sbjct: 187 AMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           +  K+ R+++A  +FS M  KG   ++ TY+ LI G       K A  +  EM   NI P
Sbjct: 247 SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV++++L+D +CK G + EA        +  + PDVVTY+ L+ GY       EA +L+
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 191 DSMLRNGIMPD 201
           D+M+  G  PD
Sbjct: 367 DAMITKGCKPD 377



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + D  + L  Q+   GL P+I T + +I  +  L R+D A  +  K+  + L+P  +TFT
Sbjct: 113 YYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFT 172

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G+   A  +F  M+ +G + +V TY+ +I+G  K     +A  + ++M E 
Sbjct: 173 TLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA 232

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+YS +ID   K   + EAL  F       + PD+ TY  LI+G C   +  EA
Sbjct: 233 GCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEA 292

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M    IMPD +  + L D
Sbjct: 293 SALLNEMRSLNIMPDIVTFNVLVD 316



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKAN 96
           CS   +D+A+  F  +   +  P  I FT L+ A  K G+  D  +  +K +E  G   N
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           + T S LI+ +   Q +  AF V  ++ +  + P IV+++ LI+ LCK G   +A+  F 
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +     PDV TY  +I G CK G    A  L   M   G  P+ +  ST+ D
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 63/120 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +   A +LF  +     +P+++ YN +I   C    L +A +LF +L    L+PN+ 
Sbjct: 460 KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQ 519

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +I+  CKEG +D+A   F  M E G   + ++Y+ +I G+   ++   A  +  EM
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A KLF +L  +GL+P+   Y TII G C    LDEA++ F  +      P+ I
Sbjct: 495 KSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEI 554

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           ++ ++I  F        A  +  +M +KG  A+V T
Sbjct: 555 SYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++DEA +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK G++D A  ++ +ML +G   + +TY+ LI G  K  ++  A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V+Y  LI G CK GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 SVDAEKMLREMLSVGLKPD 380



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD+A  +F +ML++G   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP+ ++Y+ LI GLCK+G + +A           L PD +TY  LI G CK G  
Sbjct: 268 LSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 ETAFEYRKRMIKENIRLDDVSYTAL 352



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A KLF ++ DRGL P+ +T+ T+I G+C   +LD A+++++++      P+
Sbjct: 216 LCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 XITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + VSY+ LI GLCK G   +A       L   L PD  TY I++  +CK G
Sbjct: 336 RMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVKMGSKLLKEMQRDGHVP 414



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I EC   A+L  F  L DR               +C    +  A  +F+ +T   L+P+ 
Sbjct: 127 ILECRYPASLYFFNILMDR---------------FCKEGEIRLAQSVFDGITKWGLRPSV 171

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           ++F  L++ + K G +D+   + S M   G + +V TYS LI+G  K   M  A  +++E
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDE 231

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  + PN V+++ LIDG CK G ++ A+  +   L     PD +TY  LI G CK G 
Sbjct: 232 MLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGD 291

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A  L D M   G+ PD +  +TL D
Sbjct: 292 LXQAKDLXDEMSMKGLKPDKITYTTLID 319



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T LI   CKEGR  DA  M  +ML  G K +  TY+ ++  + K+ ++K    + +
Sbjct: 346 DVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +++
Sbjct: 406 EMQRDGHVPCVIT 418



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   F    E        T   +++   K +  K  +  Y+E+ 
Sbjct: 69  FSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHL------ 163
           E     ++  ++IL+D  CK G +  A               + +F+  ++ ++      
Sbjct: 129 ECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLD 188

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  EA +L+D ML  G++P+G+  +TL 
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 119/210 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L + C L  A + F ++  +G+ PD + Y T+I G+C    +  A + F ++    + P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I  FC+ G M +A  +F +M  KG + + VT++ LI+GY K+ +MK AF V+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +   SPN+V+Y+ LIDGLCK G ++ A    H      L P++ TY  ++ G CK+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA++L       G+  D +  +TL D
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE H    L L  +L  +G  PD+I+Y+T++ GYC    LD+  +L E +    LKPNS
Sbjct: 262 IKEAH---HLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  +I   C+  ++ +A   FS+M+ +G   + V Y+ LIDG+ K  ++++A   + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   +I+P++++Y+ +I G C+ G M EA   FH      L PD VT+  LI GYCKAG 
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A ++++ M++ G  P+ +  +TL D
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLID 464



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +++ A+KL G+    GL  D +TY T++  YC    +D+A ++ +++    L+P 
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L++ FC  G ++D   + + ML KG   N  T++ L+  Y    N+K+A  +Y+
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +MC   + P+  +Y  L+ G CK   M+EA + F           V TY++LI+G+ K  
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +++D M R G+  D  +    +D
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFDFFSD 709



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 109/199 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF ++  +GLEPD +T+  +I GYC    + +A ++   +      PN +T+T LID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEG +D A  +  +M + G + N+ TY+ +++G  KS N++ A  +  E     ++ 
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+D  CK G M++A       L   L P +VT+ +L+ G+C  G   +  +L 
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584

Query: 191 DSMLRNGIMPDGLLLSTLA 209
           + ML  GI P+    ++L 
Sbjct: 585 NWMLAKGIAPNATTFNSLV 603



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 110/217 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  H+  A ++   +   G  P+++TY T+I G C    LD A +L  ++  + L+PN  
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK G +++A  +  +    G  A+ VTY+ L+D Y KS  M  A ++ +EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P IV++++L++G C  G++E+     +  L   + P+  T+  L++ YC     
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             A  +Y  M   G+ PDG     L   + ++   +E
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDA-ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+C+  A A+ +F +  + G+  ++ +YN +I   C L R+ EA  L   +      P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I+++ +++ +C+ G +D    +   M  KG K N   Y  +I    +   +  A + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    I P+ V Y+ LIDG CKRG +  A   F+      + PDV+TY  +I G+C+ 
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA +L+  M   G+ PD +  + L
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTEL 427



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE-GRM 78
           D G +P +  ++           L EA ++FEK+    L  +  +  + +    K+  + 
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
             A ++F +  E G   NV +Y+ +I    +   +K A  +   M     +P+++SYS +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           ++G C+ G +++            L P+   Y  +I   C+  +  EA + +  M+R GI
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347

Query: 199 MPDGLLLSTLAD 210
           +PD ++ +TL D
Sbjct: 348 LPDTVVYTTLID 359



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 59/120 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L AA  ++  +  RG+ PD  TY  ++ G+C    + EA  LF+++       +  T++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI  F K  +  +A  +F +M  +G  A+   +    D  +K +   +  D  +E+ EN
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +LF  +  +GLEPD I+Y T+I GYC   ++ EA+ L+ ++  V   PN  T+  
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+    ++G++ DA  +F  M   G  AN   Y   +DG  K+  +  A +++ E+   N
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              NI +YS LIDGLCK G +E A   F       L PDVVTY I+I G+CK G+   A 
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L++ M  NG  PD +  +TL
Sbjct: 538 ILFEKMEENGCTPDIIAYNTL 558



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 6/215 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H      L+ ++   GL PD+ T + +    C++NR+ EA+     +      PN
Sbjct: 101 LAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPN 160

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI   C E R+ +AT +F +M + G   N VTY  LI G  ++ N+  A  +++
Sbjct: 161 VVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHK 220

Query: 122 EMCEN------NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           EM  +      N  P +++YSI+IDGLCK G  +EA   F       ++PDV++Y+ LI 
Sbjct: 221 EMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIH 280

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+C AG+  ++  L+D M+  G+ PD +  S L D
Sbjct: 281 GFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLID 315



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 6/208 (2%)

Query: 7   HLDAALKLFGQLTDRGLE------PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +++ ALKL  ++ +   +      P +ITY+ II G C + R DEA +LFE++    + P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I+++ LI  FC  G+ D +  +F +M+++G + ++VT+S LID   K   +  A  + 
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M +  I PN+++Y+ LIDG C  G +  A   F       L PD ++Y  LI GYCK 
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  EAM LY+ ML+ G  P+     TL
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTL 418



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 121/202 (59%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +LF ++  +G+ PD+I+Y+T+I G+C   + D++  LF+++    ++P+ +TF++L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CKEG++ +A  +   M+++G   N++TY+ LIDG+    ++ SA +++  M    +
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ +SY+ LI+G CK   ++EA+  ++  L     P+V TY  L++G  + G+  +A +
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L+  M   G+  +  +     D
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLD 455



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  AL     +  RG  P+++TY T+I G C  +R+ EA +LF ++  +   PN++T+ 
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYG 200

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP------KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            LI   C+ G ++ A  +  +ML          K  V+TYS +IDG  K      A +++
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM    + P+++SYS LI G C  G  +++ + F   +D  + PD+VT+++LI   CK 
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+ TEA +L + M++ GI+P+ +  ++L D
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLID 350



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQL 58
           E  +  A +LF ++   G  P+ +TY T+I G C    ++ A++L +++        V  
Sbjct: 174 EHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNC 233

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           KP  IT++I+ID  CK GR D+A  +F +M  +G   +V++YS LI G+  +     +  
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKH 293

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +++EM +  + P++V++S+LID LCK G + EA       +   ++P+++TY  LI G+C
Sbjct: 294 LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             G    A +L+ SM   G+ PD +  +TL +
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLIN 385



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 98/178 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  A KLFG +   G+  +   Y   + G C  + L EA++LF +L     K N
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLN 481

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++ LID  CK G+++ A  +F K+ ++G + +VVTY+ +I G+ K   + +A  ++E
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFE 541

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +M EN  +P+I++Y+ L+ G C+   +EE +   H  +   + P+  +  I++   CK
Sbjct: 542 KMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A +LF +L+  GL+PD++TYN +I G+C + ++D A  LFEK+      P+
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            I +  L+  FC+  ++++   +  KM++K    N  + + ++D   K +  K   D+
Sbjct: 552 IIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 2/138 (1%)

Query: 73  CKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           CK G +    A   F  M+   P   + +++ L+ G  K  +    F +Y EM    +SP
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ + SIL + LC    + EAL A    L    +P+VVTY  LI+G C   R +EA +L+
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G  P+ +   TL
Sbjct: 185 LRMQKLGCTPNAVTYGTL 202



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 76/225 (33%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I ++N ++ G   +N   +   L+ ++    L P+  T +IL +  C   R+ +A   
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + +L +G                                     PN+V+Y+ LI GLC 
Sbjct: 149 MAGILRRG-----------------------------------YIPNVVTYTTLIKGLCM 173

Query: 145 RGLMEEALYAF----------------------------HCALDNH-------------L 163
              + EA   F                            + AL  H              
Sbjct: 174 EHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNC 233

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            P V+TY+I+I G CK GR  EA +L++ M   G++PD +  STL
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTL 278


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 113/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A     ++ + G  PD +TYNT+I GYC    + EA +  +++    +K +S+
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++   C+E ++++A  + S   ++G   + V+Y  LI GYFK  N+  A  +++EM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+ V+Y+ +I GLC+ G  E+A+   +  L++ LLPD  TY  ++ GYC+ G  
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q ++ M+ N   PD
Sbjct: 575 EKAFQFHNKMVENSFKPD 592



 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ A KL  ++ +  L PD+++YNT+I G    +++ EA +L E+++   +KPN
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T  I++  +CKEG+MDDA+   +KM E G   + VTY+ LI+GY K+ NM  AF   +
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+  + V+ + ++  LC+   +EEA      A       D V+Y  LI GY K G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A++L+D M    I+P
Sbjct: 503 NVDRALKLWDEMKEKEIIP 521



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L   +  RGL P+  TYN ++ GYC +  L EA  + E +T   L P+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LI+  C EGR+++A  +  +M       +VV+Y+ LI+G  +   +  AF + E
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + PN V+++I++   CK G M++A        ++   PD VTY  LI GYCKAG
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA +  D M R  +  D + L+T+
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTI 459



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F      G+ P++ T+N +I GYC  N+  +AV+    +      P+++T+  ++D  CK
Sbjct: 196 FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCK 255

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           +GR+ DA  +   M  +G   N  TY+ L+ GY K   +K A +V E M +NN+ P++ +
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           Y++LI+GLC  G +EEA +     ++N  LLPDVV+Y  LI G  +  + +EA +L + M
Sbjct: 316 YNMLINGLCNEGRIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+ P+ +  + +  +
Sbjct: 375 SEKGVKPNAVTHNIMVKW 392



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+ A KL      RG   D ++Y T+I GY     +D A++L++++   ++ P+
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +I   C+ G+ + A    +++LE G   +  TY+ ++ GY +  +++ AF  + 
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M EN+  P++ + +IL+ GLC  G++E+AL  F+  +      D VTY  LI   CK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A  L   M    + PD
Sbjct: 643 RLDDAFNLLSEMEEKELGPD 662



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 102/202 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K+ ++D ALKL+ ++ ++ + P  +TYN II G C   + ++A+    +L    L P+ 
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  ++  +C+EG ++ A    +KM+E   K +V T + L+ G      ++ A  ++  
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
                 + + V+Y+ LI  LCK G +++A        +  L PD  TY  +I     +GR
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678

Query: 183 PTEAMQLYDSMLRNGIMPDGLL 204
             EA +    ML  G +PD +L
Sbjct: 679 IREAEEFMSKMLEKGNLPDQVL 700



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 3/213 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTII---CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           A ++F ++    L P+++T NT++     Y S + +  + + F     + + PN  TF I
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C E +  DA    + M +     + VTY+ ++D   K   +  A D+  +M    
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG 273

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  +Y+IL+ G CK G ++EA         N+LLPDV TY +LI G C  GR  EA 
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +L D M    ++PD +  +TL +  L+ S   E
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 23/216 (10%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A+    +L + GL PD  TYNTI+ GYC    +++A Q   K+     KP+  T  IL
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C EG ++ A  +F+  + KG   + VTY+ LI    K   +  AF++  EM E  +
Sbjct: 600 LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD---------------------- 166
            P+  +Y+ +I  L   G + EA       L+   LPD                      
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDS 719

Query: 167 -VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             V Y+  I+  C  G+  +AM+++    + GI  D
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVD 755



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 23/164 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L+ ALKLF     +G   D +TYNT+I   C   RLD+A  L  ++   +L P+  T
Sbjct: 606 EGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG-----------------------PKANVVTYS 101
           +  +I A    GR+ +A    SKMLEKG                         ++ V YS
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYS 725

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             I         K A  ++ E  +  I+ +  +Y  L+DGL KR
Sbjct: 726 EWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E   + A K+  Q+    + P++ITYNT+I G+CS+ +L +A+ L   L    L P+
Sbjct: 313 LCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPS 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +L+  FC++G    A  M  +M E+G K + VTY+ LID + +S NM++A  +  
Sbjct: 373 LVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRS 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P++ +YS+LI G C +G M EA   F   ++  L P+ V Y  +I GYCK G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEG 492

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A++L+  M    + P+
Sbjct: 493 SSYRALRLFRDMEEKELAPN 512



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A K+F ++ +RG+  +I+TYNT+I G C   + +EA ++ +++    + PN
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPN 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID FC  G++  A  +   +  +G   ++VTY+ L+ G+ +  +   A  + +
Sbjct: 338 LITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVK 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I P+ V+Y+ILID   +   ME A+       +  L+PDV TY++LI G+C  G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKG 457

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA +L+ SM+   + P+ ++ +T+
Sbjct: 458 QMNEASRLFKSMVEKMLEPNEVIYNTM 484



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 102/193 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   L  RGL P ++TYN ++ G+C       A ++ +++    +KP+ +T+TI
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F +   M+ A  + S M E G   +V TYS LI G+     M  A  +++ M E  
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM 473

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ +I G CK G    AL  F    +  L P+V +Y+ LIR  CK  +  EA 
Sbjct: 474 LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAE 533

Query: 188 QLYDSMLRNGIMP 200
            L + M+ +GI P
Sbjct: 534 DLVEKMIDSGIDP 546



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 106/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A  LF ++   GL  +  TY  +I G        +  +++EK+    + PN  
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK+GR  DA  +F +M E+G   N+VTY+ LI G  +      A  V ++M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I+PN+++Y+ LIDG C  G + +AL          L P +VTY +L+ G+C+ G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A ++   M   GI P  +  + L D
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILID 416



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 10/221 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C     ++ +  L  +L + G  P+++ Y T+I G C    +++A  LF ++   
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L  N  T+T+LI    K G       M+ KM E G   N+ TY+C+++   K    K A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V++EM E  +S NIV+Y+ LI GLC+     EA           + P+++TY  LI G
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDG 347

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +C  G+  +A+ L   +   G+ P      +L  YN+  SG
Sbjct: 348 FCSVGKLGKALSLCRDLKSRGLSP------SLVTYNVLVSG 382



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 102/185 (55%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D+ ++  +I G C    ++++  L  +L      PN + +T LID  CK+G ++ A  +F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M + G  AN  TY+ LI G FK+   K  F++YE+M E+ + PN+ +Y+ +++ LCK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G  ++A   F    +  +  ++VTY  LI G C+  +  EA ++ D M    I P+ +  
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 206 STLAD 210
           +TL D
Sbjct: 342 NTLID 346



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 73/125 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A++L   + + GL PD+ TY+ +I G+C   +++EA +LF+ +    L+PN + + 
Sbjct: 423 NMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  +CKEG    A  +F  M EK    NV +YS LI    K + +K A D+ E+M ++
Sbjct: 483 TMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDS 542

Query: 127 NISPN 131
            I P+
Sbjct: 543 GIDPS 547


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL +F ++  +G+ PD+ TY+ ++ G C+ ++ +EA  LF ++  + + P+
Sbjct: 234 LCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD 293

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF IL+D  CKEG + +A  +   M+EKG + N  TY+ L++GY     +  A  V++
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFD 353

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN+VSY+ILI+G CK   ++EA   F       L+P+   Y  LI G C+AG
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAG 413

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +L+  M   G  PD +  + L D
Sbjct: 414 RHCEARELFKDMQAQGCSPDLVTCTILLD 442



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ F ++   G +P++ TYNTII G+C + +   AV L +K+     +P+ + +  +ID
Sbjct: 173 AMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIID 232

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+  + +A  +FS++  KG + +V TYS L+ G   S   + A  ++ EM   NI P
Sbjct: 233 GLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMP 292

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+++IL+D LCK G++ EA       ++  + P+  TY  L+ GYC   +  EA  ++
Sbjct: 293 DVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVF 352

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           D+M+  G MP+      +  YN+  +G
Sbjct: 353 DAMITKGCMPN------VVSYNILING 373



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 110/195 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  + G++   G EPD +T++++I G C  ++   A++ F+++     +PN  T+ 
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  FCK G+   A  +  KM + G + ++V Y+ +IDG  K + +  A D++ E+   
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK 253

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++ +YSIL+ GLC     EEA   F+  +  +++PDVVT+ IL+   CK G  +EA
Sbjct: 254 GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313

Query: 187 MQLYDSMLRNGIMPD 201
             +   M+  G+ P+
Sbjct: 314 QGIIKIMIEKGVEPN 328



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 107/181 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  +   + ++G+EP+  TYN+++ GYC  N++ EA  +F+ +      PN
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++ ILI+ +CK  R+D+A  +F +M  +G   N   Y+ LI G  ++     A ++++
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M     SP++V+ +IL+D LCK G ++ AL  F    D+ L P++VTY ILIR   K+G
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483

Query: 182 R 182
           +
Sbjct: 484 K 484



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  H    L L  ++    +E D+  +N +I  +  L R+D A  +  K+  +  +P+
Sbjct: 94  LVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPD 153

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF+ LI+  C E +   A   F +M+  G + N+ TY+ +I G+ K      A  + +
Sbjct: 154 AVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLK 213

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+IV Y+ +IDGLCK  L+ EAL  F       + PDV TY+IL+ G C + 
Sbjct: 214 KMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSD 273

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L++ M+   IMPD +  + L D
Sbjct: 274 QKEEASALFNEMMSLNIMPDVVTFNILVD 302



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 39/68 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  +  +G  PD++T   ++   C L  LD A++LF  +    LKPN +T+ ILI 
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477

Query: 71  AFCKEGRM 78
           A  K G++
Sbjct: 478 AMYKSGKI 485


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 123/220 (55%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A +L   +   G  PDII+YN +I G+C + + DEA +L + +  V LKPN
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+  +C++GR+DDA  +F +ML  G    VVTY+ ++ G FK++    A ++Y 
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    +I +Y+I+++GL K   ++EAL  F       L  D++T+ I+I    K G
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDG 673

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           R  +AM L+ ++  NG++PD      +A+ NL   GS E 
Sbjct: 674 RKEDAMNLFATISANGLVPDVTTYRLIAE-NLIEEGSLEE 712



 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 112/200 (56%), Gaps = 3/200 (1%)

Query: 5   ECHLDAALKLFGQLTD---RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           E   + AL+L   + D   R   P++++YNT+I G+ +  ++D+A  LF  +T   + PN
Sbjct: 179 ENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPN 238

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI+ID  CK   +D A  +F +M++KG + N+VTY+CLI GY      K    + +
Sbjct: 239 VVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLK 298

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + P+  +Y +L+D LCK+G   EA   F   +   + PDV  Y I++ GY   G
Sbjct: 299 EMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKG 358

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             +E     D M+ NGI P+
Sbjct: 359 ALSEMHSFLDLMVGNGISPN 378



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 112/202 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +F Q+ D+G+ P+I+TY  +I GY S+ +  E V++ ++++   L+P+  T+ +
Sbjct: 255 VDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGL 314

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK+G+  +A  +F  M+ KG K +V  Y  ++ GY     +       + M  N 
Sbjct: 315 LLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG 374

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISPN   ++I+     K+ ++ EA+  F+      L P+VV YA LI   CK GR  +A 
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAE 434

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
             ++ M+  G+ P+ ++ ++L 
Sbjct: 435 LKFNQMINEGVAPNIVVFTSLV 456



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 39/205 (19%)

Query: 36  GYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK 94
           G C   R+ EA+  L  +++ +   PN +++  L+  FC E R ++A  +   M +   +
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 95  A---NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +   N+V+Y+ +I+G+F    +  A++++ +M +  I PN+V+Y+I+IDGLCK  +++ A
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGY---------------------------------- 177
              F   +D  + P++VTY  LI GY                                  
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 178 -CKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G+ TEA +L+DSM+R GI PD
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPD 343



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 109/201 (54%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL   +   GL+P+  TYNT++ GYC   R+D+A  +F+++    + P  +T+  +
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +    K  R  +A  ++  M+  G + ++ TY+ +++G  K+  +  A  +++ +C  ++
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             +I++++I+I  L K G  E+A+  F     N L+PDV TY ++     + G   E   
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDG 715

Query: 189 LYDSMLRNGIMPDGLLLSTLA 209
           ++  M ++G  P+ L+L+ L 
Sbjct: 716 MFSEMEKSGCAPNSLMLNFLV 736



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 104/189 (55%), Gaps = 1/189 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK F Q+ + G+ P+I+ + +++ G C++++ ++A +LF ++    + PN + F  +
Sbjct: 432 DAELK-FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C EGR+  A  +   M   G + ++++Y+ LI G+        A  + + M    +
Sbjct: 491 MCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGL 550

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN  +Y+ L+ G C+ G +++A   F   L N + P VVTY  ++ G  K  R +EA +
Sbjct: 551 KPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE 610

Query: 189 LYDSMLRNG 197
           LY +M+ +G
Sbjct: 611 LYLNMITSG 619



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 100/200 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A KLF  +  +G++PD+  Y  I+ GY +   L E     + +    + PN
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F I+  AF K+  + +A  +F+KM ++G   NVV Y+ LID   K   +  A   + 
Sbjct: 379 HYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PNIV ++ L+ GLC     E+A   F   ++  + P+VV +  ++   C  G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A +L D M R G  PD
Sbjct: 499 RVMKAQRLIDLMERVGTRPD 518



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 90/179 (50%), Gaps = 7/179 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D A  +F ++   G+ P ++TYNTI+ G     R  EA +L+  +     + +  
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+++   K   +D+A  MF  +  K  + +++T++ +I    K    + A +++  +
Sbjct: 626 TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH------CALDNHLLPDVVTYAILIRG 176
             N + P++ +Y ++ + L + G +EE    F       CA  N L+ + +   +L+RG
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCA-PNSLMLNFLVRRLLLRG 743



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 77/150 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A +L+  +   G +  I TYN I+ G    N +DEA+++F+ L    L+ +
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVD 658

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF I+I A  K+GR +DA  +F+ +   G   +V TY  + +   +  +++    ++ 
Sbjct: 659 IITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFS 718

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM ++  +PN +  + L+  L  RG +  A
Sbjct: 719 EMEKSGCAPNSLMLNFLVRRLLLRGDISRA 748



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 67/132 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALK+F  L  + L+ DIIT+N +I       R ++A+ LF  ++   L P+  T+ +
Sbjct: 640 VDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRL 699

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   MFS+M + G   N +  + L+       ++  A     ++ E N
Sbjct: 700 IAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKN 759

Query: 128 ISPNIVSYSILI 139
            S    + S+LI
Sbjct: 760 FSLEASTTSMLI 771



 Score = 43.5 bits (101), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 49/116 (42%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   + A+ LF  ++  GL PD+ TY  I         L+E   +F ++      PN
Sbjct: 669 LLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPN 728

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           S+    L+      G +  A    SK+ EK       T S LI  + + ++   + 
Sbjct: 729 SLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSL 784


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
           thaliana]
          Length = 1184

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 119/210 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L + C L  A + F ++  +G+ PD + Y T+I G+C    +  A + F ++    + P
Sbjct: 768 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 827

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I  FC+ G M +A  +F +M  KG + + VT++ LI+GY K+ +MK AF V+
Sbjct: 828 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +   SPN+V+Y+ LIDGLCK G ++ A    H      L P++ TY  ++ G CK+
Sbjct: 888 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA++L       G+  D +  +TL D
Sbjct: 948 GNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977



 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE H    L L  +L  +G  PD+I+Y+T++ GYC    LD+  +L E +    LKPNS
Sbjct: 705 IKEAH---HLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 759

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  +I   C+  ++ +A   FS+M+ +G   + V Y+ LIDG+ K  ++++A   + E
Sbjct: 760 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 819

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   +I+P++++Y+ +I G C+ G M EA   FH      L PD VT+  LI GYCKAG 
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A ++++ M++ G  P+ +  +TL D
Sbjct: 880 MKDAFRVHNHMIQAGCSPNVVTYTTLID 907



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 113/209 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  +++ A+KL G+    GL  D +TY T++  YC    +D+A ++ +++    L+P 
Sbjct: 944  LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 1003

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +TF +L++ FC  G ++D   + + ML KG   N  T++ L+  Y    N+K+A  +Y+
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +MC   + P+  +Y  L+ G CK   M+EA + F           V TY++LI+G+ K  
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA +++D M R G+  D  +    +D
Sbjct: 1124 KFLEAREVFDQMRREGLAADKEIFDFFSD 1152



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 109/199 (54%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A KLF ++  +GLEPD +T+  +I GYC    + +A ++   +      PN +T+T LID
Sbjct: 848  AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              CKEG +D A  +  +M + G + N+ TY+ +++G  KS N++ A  +  E     ++ 
Sbjct: 908  GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 967

Query: 131  NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + V+Y+ L+D  CK G M++A       L   L P +VT+ +L+ G+C  G   +  +L 
Sbjct: 968  DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027

Query: 191  DSMLRNGIMPDGLLLSTLA 209
            + ML  GI P+    ++L 
Sbjct: 1028 NWMLAKGIAPNATTFNSLV 1046



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 110/217 (50%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K  H+  A ++   +   G  P+++TY T+I G C    LD A +L  ++  + L+PN  
Sbjct: 876  KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  +++  CK G +++A  +  +    G  A+ VTY+ L+D Y KS  M  A ++ +EM
Sbjct: 936  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                + P IV++++L++G C  G++E+     +  L   + P+  T+  L++ YC     
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055

Query: 184  TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A  +Y  M   G+ PDG     L   + ++   +E
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDA-ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+C+  A A+ +F +  + G+  ++ +YN +I   C L R+ EA  L   +      P
Sbjct: 663 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 722

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I+++ +++ +C+ G +D    +   M  KG K N   Y  +I    +   +  A + +
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    I P+ V Y+ LIDG CKRG +  A   F+      + PDV+TY  +I G+C+ 
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA +L+  M   G+ PD +  + L
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTEL 870



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE-GRM 78
           D G +P +  ++           L EA ++FEK+    L  +  +  + +    K+  + 
Sbjct: 613 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 670

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
             A ++F +  E G   NV +Y+ +I    +   +K A  +   M     +P+++SYS +
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           ++G C+ G +++            L P+   Y  +I   C+  +  EA + +  M+R GI
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790

Query: 199 MPDGLLLSTLAD 210
           +PD ++ +TL D
Sbjct: 791 LPDTVVYTTLID 802



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 59/120 (49%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +L AA  ++  +  RG+ PD  TY  ++ G+C    + EA  LF+++       +  T++
Sbjct: 1054 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 1113

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +LI  F K  +  +A  +F +M  +G  A+   +    D  +K +   +  D  +E+ EN
Sbjct: 1114 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1173


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 107/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +  RG+  D +TYN  + G C    L +A  L+ K+    L+P+ IT+T LI 
Sbjct: 496 AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIH 555

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+ GR+ +A  +F  ML  G   + VTY+  I  Y +  N+ SA+  +++M E  + P
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP 615

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y++LI  LC+ G    A   FH  L+  L P+  TY +LI G CK G   EA++LY
Sbjct: 616 NEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLY 675

Query: 191 DSMLRNGIMPD 201
             M ++GI PD
Sbjct: 676 SEMHQHGIHPD 686



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 35/237 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + +  +++AA   F ++   GL PD+ITYN++I GYC    L EA+ LF  L    L P+
Sbjct: 347 MFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPS 406

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM-------- 113
            +T+ IL+D +C+ G +++A     +M+E+G + +V TY+ L++G  K +N+        
Sbjct: 407 VLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFD 466

Query: 114 ---------------------------KSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                        AF + E M    IS + V+Y+I +DGLCK G
Sbjct: 467 EMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSG 526

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            +++A   +   + + L PD +TY  LI  +C+ GR  EA  ++D ML +G+ P  +
Sbjct: 527 NLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 110/208 (52%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           + F ++  +GL+PD   YNT I     L    EA QL E +    +  +++T+ I +D  
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGL 522

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK G + DA +++ KM+  G + + +TY+CLI  + +   ++ A D+++ M  + + P+ 
Sbjct: 523 CKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSA 582

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y++ I   C+RG +  A   F   L+  + P+ VTY +LI   C+ GR   A Q +  
Sbjct: 583 VTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHE 642

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ML  G+ P+    + L D N +    +E
Sbjct: 643 MLERGLSPNKYTYTLLIDGNCKEGNWEE 670



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 1/193 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A  L+ ++   GL+PD ITY  +I  +C   RL EA  +F+ +    L P+
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T+ I A+C+ G +  A   F KMLE+G + N VTY+ LI    +      A+  + 
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFH 641

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  +SPN  +Y++LIDG CK G  EEA+  +     + + PD  T+  L +G+   G
Sbjct: 642 EMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEG 700

Query: 182 RPTEAMQLYDSML 194
           +   A+Q  ++++
Sbjct: 701 QSKHAIQYMENVV 713



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 3/211 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-- 59
           L  E   D    ++ ++   G+EP I+TYNT++  +    R+D+A +L  ++        
Sbjct: 206 LRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCL 265

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ +T+ ++I+   ++G ++ A  +  +M     KA+  T++ LI GYF   +++ A  +
Sbjct: 266 PSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGAL 324

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             EM    I P +V+Y+ +I G+ + G +E A   F       LLPD++TY  LI GYCK
Sbjct: 325 QLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCK 384

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AG   EA+ L+  + R G+ P  L  + L D
Sbjct: 385 AGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 9/221 (4%)

Query: 2   LIKECHLDAALKLFGQLTDR--GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
             +E  +D A KL  ++  R  G  P  +TYN +I G      L++A QL +++   + K
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-K 299

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            ++ TF  LI  +   G ++ A  +  +M  +G    VVTY+ +I G F+S N+++A   
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + EM    + P++++Y+ LI+G CK G ++EAL+ F       L P V+TY IL+ GYC+
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            G   EA +    M+  G  PD      ++ Y +  +GS++
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPD------VSTYTILMNGSRK 454



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL LFG L   GL P ++TYN ++ GYC L  L+EA +  +++     +P+  
Sbjct: 384 KAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVS 443

Query: 64  TFTILID--------AFCKE---------------------------GRMDDATMMFSKM 88
           T+TIL++        A  +E                           G   +A  +   M
Sbjct: 444 TYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVM 503

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + +G  ++ VTY+  +DG  KS N+K A+ ++ +M  + + P+ ++Y+ LI   C+RG +
Sbjct: 504 ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRL 563

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F   L + L P  VTY + I  YC+ G    A   +  ML  G+ P+ +  + L
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 114/192 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A + F  L+ +G  PD  TY T+I GY +   +DEA +L +++    L PN
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK   +D A  +F K+ +KG   NVVTY+ LIDGY K  NM +AF + +
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  ISP++V+YS LI+GLCK G +E ++   +  +   +   ++ Y  L++GY ++G
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903

Query: 182 RPTEAMQLYDSM 193
              +  +LYD M
Sbjct: 904 EMQKIHKLYDMM 915



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFT 66
           ++AA  +   ++++G+  +++TY  +I GYC   ++DEA ++   +     L P+   + 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID +C+ G++DDA  +  +ML  G K N+   + LI+GY K   +  A  V   M + 
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P+  SY+ L+DG C+ G   EA       L   + P V+TY  L++G C+ G   +A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +Q++  M++ G+ PD +  STL D
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLD 480



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 101/176 (57%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+ I YN  I G C   ++D+A + F  L+     P++ T+  LI  +   G +D+A 
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  +ML +G   N+VTY+ LI+G  KS+N+  A  ++ ++ +  + PN+V+Y+ LIDG 
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           CK G M+ A       ++  + P VVTY+ LI G CK G    +M+L + M++ G+
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 105/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  +  ++ D  L+PD  +YNT++ GYC      EA  L +K+    ++P  +
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C+ G  DDA  ++  M+++G   + V YS L+DG FK +N + A  +++++
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                + + ++++ +I GLCK G M EA   F    D    PD +TY  LI GYCKA   
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A ++  +M R  I P
Sbjct: 559 GQAFKVKGAMEREPISP 575



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 36/243 (14%)

Query: 4   KECHLDAALK-LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K+C +D A K L G   +  L PD   Y  +I GYC   ++D+AV+L +++  + LK N 
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
                LI+ +CK G + +A  + ++M++   K +  +Y+ L+DGY +  +   AF++ ++
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 427

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA----------- 171
           M +  I P +++Y+ L+ GLC+ G  ++AL  +H  +   + PD V Y+           
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 487

Query: 172 ----------ILIRGY--------------CKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                     IL RG+              CK G+  EA +++D M   G  PDG+   T
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547

Query: 208 LAD 210
           L D
Sbjct: 548 LID 550



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + + A  L+  +  RG     IT+NT+I G C + ++ EA ++F+K+  +   P+
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID +CK   +  A  +   M  +    ++  Y+ LI G FKS+ +    D+  
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 601

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PNIV+Y  LIDG CK G++++A  ++    +N L  +++  + ++ G  + G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L   M+ +G  PD
Sbjct: 662 RIDEANLLMQKMVDHGFFPD 681



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 103/202 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D AL+++  +  RG+ PD + Y+T++ G   +   + A  L++ +       + ITF  
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK G+M +A  +F KM + G   + +TY  LIDGY K+ N+  AF V   M    
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISP+I  Y+ LI GL K   + E            L P++VTY  LI G+CK G   +A 
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
             Y  M  NG+  + ++ ST+ 
Sbjct: 633 SSYFEMTENGLSANIIICSTMV 654



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F  +   G  P + + N+++           A  +++++  V + P+    +I+++
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 234

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFCK+G++D+A     KM   G + N+VTY  LI+GY    ++++A  V + M E  +S 
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+V+Y++LI G CK+  M+EA        +   L+PD   Y +LI GYC+ G+  +A++L
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            D MLR G+  +  + ++L +
Sbjct: 355 LDEMLRLGLKTNLFICNSLIN 375



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 32/230 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++  A K+ G +    + P I  YN++I G     RL E   L  ++    L PN +
Sbjct: 554 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 613

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA------- 116
           T+  LID +CKEG +D A   + +M E G  AN++  S ++ G ++   +  A       
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673

Query: 117 -------------------------FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                                     D  +E C+  + PN + Y+I I GLCK G +++A
Sbjct: 674 VDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 733

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              F        +PD  TY  LI GY  AG   EA +L D MLR G++P+
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 36/243 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  ++ Q+   G+ PD+   + ++  +C   ++DEA    +K+  + ++PN
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 260

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ +   G ++ A  +   M EKG   NVVTY+ LI GY K   M  A  V  
Sbjct: 261 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR 320

Query: 122 EMCEN-NISPNIVSYSILID-----------------------------------GLCKR 145
            M E   + P+  +Y +LID                                   G CKR
Sbjct: 321 GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + EA       +D +L PD  +Y  L+ GYC+ G  +EA  L D ML+ GI P  L  
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 206 STL 208
           +TL
Sbjct: 441 NTL 443



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 80/135 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++D A +LF +L  +GL P+++TYNT+I GYC +  +D A +L +K+    + P+
Sbjct: 794 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 853

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+  CK G ++ +  + ++M++ G  + ++ Y  L+ GY +S  M+    +Y+
Sbjct: 854 VVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYD 913

Query: 122 EMCENNISPNIVSYS 136
            M    +S   +S+ 
Sbjct: 914 MMHIRCLSTTAISHK 928


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F ++ ++G+   ++TYN +I G C   +  EAV+L  K+  V L PN +T+ I
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC  G+MD A  +F+++   G    +VTY+ LI GY K +N+  A D+ +EM E  
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+ + V+Y+ILID   +    ++A         + L+PDV TY++LI G C  G   EA 
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + + S+    + P+ ++ +T+
Sbjct: 459 KPFKSLGEMHLQPNSVIYNTM 479



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 109/191 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL  ++   GL P+I+TYN +I G+C + ++D AV+LF +L    L P  +T+  LI 
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIA 376

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K   +  A  +  +M E+    + VTY+ LID + +      A +++  M ++ + P
Sbjct: 377 GYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVP 436

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +YS+LI G C  G M+EA   F    + HL P+ V Y  +I GYCK G    A++L 
Sbjct: 437 DVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLL 496

Query: 191 DSMLRNGIMPD 201
           + M+ +G++P+
Sbjct: 497 NEMVHSGMVPN 507



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
             +L   L + GL P+++ Y T+I G C    +  A  LF K+  + L PN  T+++L++
Sbjct: 177 VFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMN 236

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F K+G   +   M+  M   G   N   Y+CLI  Y     +  AF V+ EM E  I+ 
Sbjct: 237 GFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIAC 296

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ILI GLC+     EA+   H      L P++VTY ILI G+C  G+   A++L+
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLF 356

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + +  +G+ P      TL  YN   +G
Sbjct: 357 NQLKSSGLSP------TLVTYNTLIAG 377



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++LF QL   GL P ++TYNT+I GY  +  L  A+ L +++    +  + +T+TI
Sbjct: 349 MDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTI 408

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAF +    D A  M S M + G   +V TYS LI G   + NMK A   ++ + E +
Sbjct: 409 LIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMH 468

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ +I G CK G    AL   +  + + ++P+V ++   +   C+  +  EA 
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAE 528

Query: 188 QLYDSMLRNGIMPD 201
            L   M+ +G+ P 
Sbjct: 529 LLLGQMINSGLKPS 542



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 97/183 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++   GL P+  TY+ ++ G+       E  Q++E +    + PN+  +  LI 
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C +G +D A  +F++M EKG    V+TY+ LI G  + +    A  +  ++ +  +SP
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+ILI+G C  G M+ A+  F+    + L P +VTY  LI GY K      A+ L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 191 DSM 193
             M
Sbjct: 392 KEM 394



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 3/174 (1%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           Y+ I+  Y   +  D+A+     +      P S TF  L+    +    D A  +F+ +L
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN-VL 150

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           +     N  ++  +I G  ++      F +   + E  +SPN+V Y+ LIDG CK G + 
Sbjct: 151 KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVM 210

Query: 150 EALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            A   F C +D   L+P+  TY++L+ G+ K G   E  Q+Y++M R+GI+P+ 
Sbjct: 211 LAKNLF-CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNA 263


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 DSAFEHRKRMIQENIRLDEVAYTAL 352



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 110/195 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  L  G C+ GR  +A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAE 366

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 367 KMLREMLSVGLKPDA 381



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ SAF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ L  GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +  +L   M R+G +P
Sbjct: 396 DVWKGSKLLKEMQRDGHVP 414



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 171 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 231 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 291 DLKQAHHLIDEMSVKGLKPDKITYTTLID 319



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    LD A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T L    C+EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++     + +
Sbjct: 346 EVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGHVPSVVT 418



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVL 212


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 121/200 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++ ++ + P+++TY ++I G+C + +LD+A  L  ++    + PN  TF  L+D
Sbjct: 208 AFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVD 267

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEG+M +A  + + M+++G   +V TY+ L+DGYF  +    A +V+  M +  ++ 
Sbjct: 268 GLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTC 327

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ SYS++I GL K  +++EA+  F    + +++PDVV Y+ LI G CK+GR   A++  
Sbjct: 328 DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYV 387

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M   G  P+ +  ++L D
Sbjct: 388 DEMHDRGQPPNVITYTSLID 407



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 117/208 (56%), Gaps = 3/208 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL   ++A  +F ++   G +PDIITY T+I G C   ++ E++   ++L    +K + 
Sbjct: 95  CHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDH 154

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  LI+  CK G+   A  +  K+  +  + +VV Y+ +IDG  K + ++ AFD+Y E
Sbjct: 155 VSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCE 214

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + PN+V+Y+ LI G C  G +++A    +  +  ++ P+V T+  L+ G CK G+
Sbjct: 215 MFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGK 274

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA  L   M++ G+ PD    + L D
Sbjct: 275 MREAKSLVAVMMKEGVGPDVFTYNALMD 302



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 2/210 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L+KE     A  +F  +   G+  D+ +Y+ +I G   +  LDEA+ LFE +    + P
Sbjct: 305 FLVKEA--GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIP 362

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + ++ LID  CK GR++ A     +M ++G   NV+TY+ LID   KS  +  A  + 
Sbjct: 363 DVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALL 422

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +++ +  I  N+ +Y+IL+DGLCK G + +A   F   L      DVVTY+I+I G CK 
Sbjct: 423 KKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKE 482

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               EA+ L   M   G +PD +   T+ +
Sbjct: 483 SLFDEALTLLSKMEDKGCVPDAIAYETIIN 512



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 106/187 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LF  + +  + PD++ Y+++I G C   R++ A++  +++      PN IT+T 
Sbjct: 345 LDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTS 404

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CK  ++D A  +  K+ ++G +AN+ TY+ L+DG  K   +  A  V++++    
Sbjct: 405 LIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKG 464

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + ++V+YSI+I+GLCK  L +EAL       D   +PD + Y  +I  + +     +A 
Sbjct: 465 HNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAE 524

Query: 188 QLYDSML 194
           +L   M+
Sbjct: 525 KLLREMI 531



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 103/195 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  +L    +L  +G++ D ++Y T+I G C + +   A++L  K+     +P+ + + 
Sbjct: 134 QVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYN 193

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID  CK+  + DA  ++ +M EK    NVVTY+ LI G+     +  AF +  EM   
Sbjct: 194 TIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLK 253

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N++PN+ +++ L+DGLCK G M EA       +   + PDV TY  L+ GY       +A
Sbjct: 254 NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKA 313

Query: 187 MQLYDSMLRNGIMPD 201
             +++ M + G+  D
Sbjct: 314 KNVFNIMAQMGVTCD 328



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  L   +   G+ PD+ TYN ++ GY  +    +A  +F  +  + +  +
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +++++I    K   +D+A  +F  M  +    +VV YS LIDG  KS  + SA    +
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    PN+++Y+ LID LCK   +++A+       D  +  ++ TY IL+ G CK G
Sbjct: 389 EMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448

Query: 182 RPTEAMQLYDSMLRNG---------IMPDGLLLSTLAD 210
           R T+A +++  +L  G         IM +GL   +L D
Sbjct: 449 RLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFD 486



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 87/150 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +++ALK   ++ DRG  P++ITY ++I   C  +++D+A+ L +K+    ++ N
Sbjct: 374 LCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQAN 433

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ IL+D  CK+GR+ DA  +F  +L KG   +VVTYS +I+G  K      A  +  
Sbjct: 434 MYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M +    P+ ++Y  +I+   ++ + ++A
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKA 523



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 99/202 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ A+  F ++      P II +  I+            + LF+++    ++ N IT  
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+++C   +++ A  +F+K+L+ G + +++TY+ LI G   +  +K + + ++ +   
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I  + VSY  LI+GLCK G    AL            PDVV Y  +I G CK     +A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             LY  M    + P+ +  ++L
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSL 230



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 2/175 (1%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           + SL  L++A+  F ++  ++  P  I F  ++ +  K         +F +M   G ++N
Sbjct: 24  FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSN 83

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            +T + LI+ Y   + + SAF V+ ++ +    P+I++Y+ LI GLC  G ++E+L  FH
Sbjct: 84  YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESL-NFH 142

Query: 157 CALDNHLLP-DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L +  +  D V+Y  LI G CK G+   A++L   +      PD ++ +T+ D
Sbjct: 143 DRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIID 197



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 68/124 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++ D+G++ ++ TYN ++ G C   RL +A ++F+ L       +
Sbjct: 409 LCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVD 468

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I+  CKE   D+A  + SKM +KG   + + Y  +I+ +F+      A  +  
Sbjct: 469 VVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLR 528

Query: 122 EMCE 125
           EM +
Sbjct: 529 EMID 532


>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 114/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+++F ++   G+ P+  +YNT+I GYC    L+ AV+L   +    ++ N +
Sbjct: 228 KSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVV 287

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LID FCKEG++ +A+ +FS+M       N +TY+ LI+G+ +  N +    +YEEM
Sbjct: 288 TFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEM 347

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +I++Y+ LI GLCK G  ++A Y        +L+P+  T++ LI G C     
Sbjct: 348 SRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNS 407

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A QLY SM+R G  P+
Sbjct: 408 DRAFQLYKSMVRIGCHPN 425



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  + ++    + P++ T N ++  +C   +L++AVQ+FE++  V + PN  ++  
Sbjct: 197 VDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNT 256

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C++G ++ A  + + M  KG +ANVVT++ LIDG+ K   +  A  V+ EM   N
Sbjct: 257 LIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLN 316

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN ++Y+ LI+G  + G  E     +     N +  D++TY  LI G CK G+  +A 
Sbjct: 317 VAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAA 376

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   + +  ++P+    S L
Sbjct: 377 YMVKELDKENLVPNASTFSAL 397



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   F Q+   G  P + + N  +     L+R+D A+  ++++   ++ PN  T  +++ 
Sbjct: 165 ATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMR 224

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFCK G+++ A  +F +M   G   N  +Y+ LI GY +   + SA  +   M    +  
Sbjct: 225 AFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEA 284

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+++ LIDG CK G + EA   F      ++ P+ +TY  LI G+ + G      +LY
Sbjct: 285 NVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLY 344

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M RNG+  D L  + L
Sbjct: 345 EEMSRNGVKADILTYNAL 362



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 97/172 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A+KL   +  +G+E +++T+N++I G+C   +L EA ++F ++  + + PN+IT+  
Sbjct: 267 LNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNT 326

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+   + G  +    ++ +M   G KA+++TY+ LI G  K    K A  + +E+ + N
Sbjct: 327 LINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKEN 386

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + PN  ++S LI G C R   + A   +   +     P+  T+ +L+  +CK
Sbjct: 387 LVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCK 438



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 91/200 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A K+F ++    + P+ ITYNT+I G+  +   +   +L+E+++   +K + +
Sbjct: 298 KEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADIL 357

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CKEG+   A  M  ++ ++    N  T+S LI G     N   AF +Y+ M
Sbjct: 358 TYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSM 417

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN  ++++L+   CK    E A        +    P     + +  G C  G+ 
Sbjct: 418 VRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKE 477

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             AM+L   +    +M  G 
Sbjct: 478 HLAMKLSSELKARHMMTKGF 497



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 5/186 (2%)

Query: 26  DIITYNTIICGYCSL-NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           ++I  + ++ G+  L ++L EA+ L+    C     +   F  L        +  +AT  
Sbjct: 113 ELILKSVLVKGFIDLPDKLFEAI-LYSYRMC---DSSPRVFDSLFKTLAHMKKFRNATDT 168

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M   G    V + +  +        +  A   Y+EM    ISPN+ + ++++   CK
Sbjct: 169 FLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCK 228

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +E+A+  F       + P+  +Y  LI GYC+ G    A++L +SM   G+  + + 
Sbjct: 229 SGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVT 288

Query: 205 LSTLAD 210
            ++L D
Sbjct: 289 FNSLID 294



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A  +  +L    L P+  T++ +I G C  N  D A QL++ +  +   PN
Sbjct: 366 LCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPN 425

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK--GPKANVVT 99
             TF +L+ AFCK    + A ++  +M E+   P ++V++
Sbjct: 426 EQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLS 465


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 119/204 (58%), Gaps = 2/204 (0%)

Query: 7   HLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSIT 64
            + AAL +  ++ +RG + P+  TY T+I G+C + R+DEAV++F E LT  ++KP ++ 
Sbjct: 160 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 219

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +C +G++D A +   +M+E+G    V TY+ L+   F       A+++ EEM 
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              ++P++ +Y+ILI+G CK G +++AL  F       +   VVTY  LI    K G+  
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L+D  +R GI PD +L + L
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNAL 363



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  +GL PD+ TYN +I G+C    + +A+++FE ++   ++   +T+T LI 
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+G++ +   +F + + +G + ++V Y+ LI+ +  S N+  AF++  EM +  I+P
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 390

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+ GLC  G ++EA        +  + PD+VTY  LI GY   G   +A+++ 
Sbjct: 391 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 450

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
           + M+  G  P      TL  YN
Sbjct: 451 NEMMNKGFNP------TLLTYN 466



 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 36/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLD------------------ 44
           K   +D A+K+F ++  +G ++P+ + YN +I GYC   +LD                  
Sbjct: 193 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 252

Query: 45  -----------------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                            EA +L E++    L P+  T+ ILI+  CKEG +  A  +F  
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G +A VVTY+ LI    K   ++    +++E     I P++V Y+ LI+     G 
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++ A           + PD VTY  L+RG C  GR  EA +L D M   GI PD +  +T
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 208 L 208
           L
Sbjct: 433 L 433



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 96/175 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KLF +   RG+ PD++ YN +I  + +   +D A ++  ++   ++ P+
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   C  GR+D+A  +  +M E+G + ++VTY+ LI GY    ++K A  +  
Sbjct: 392 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 451

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM     +P +++Y+ LI GLCK G  ++A       ++N + PD  TY  LI G
Sbjct: 452 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 3/155 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A ++ G++  + + PD +TYNT++ G C L R+DEA +L +++T   ++P+ +T+ 
Sbjct: 372 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +  +G + DA  + ++M+ KG    ++TY+ LI G  K+     A ++ +EM EN
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 491

Query: 127 NISPNIVSYSILIDGLC---KRGLMEEALYAFHCA 158
            I+P+  +Y  LI+GL    +R + +E L A   A
Sbjct: 492 GITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 526


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 111/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  +  F ++     EPD+ITYNT+I  +C   +L + ++ F ++    LKPN ++++ 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DAFCKE  M  A   +  M   G   N  TY+ L+D Y K  N+  AF + +EM +  
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N+V+Y+ LIDGLC    ++EA   F   +   ++P++ +Y  LI G+ KA     A+
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L D M   GI PD LL  T 
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTF 384



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 110/208 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   L+ F ++   GL+P++++Y+T++  +C  + + +A++ +  +  + L PN  T+T 
Sbjct: 219 LPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTS 278

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA+CK G + DA  +  +M + G + NVVTY+ LIDG    + +K A +++ +M    
Sbjct: 279 LVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAG 338

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ SY+ LI G  K   M+ AL          + PD++ Y   I   C   +   A 
Sbjct: 339 VIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAK 398

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            + + M   GI  +  + +TL D   +S
Sbjct: 399 VVMNEMQEKGIKANTFIYTTLMDAYFKS 426



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 112/210 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI+E   + AL+ F ++    + P   + N ++  +  L + D   + F+ +     KP
Sbjct: 72  VLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKP 131

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              T+ I+ID  CKEG ++ A+ +F +M  +G   + VTY+ +IDGY K   +      +
Sbjct: 132 TVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFF 191

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM   +  P++++Y+ LI+  CK G + + L  F     + L P+VV+Y+ L+  +CK 
Sbjct: 192 EEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKE 251

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +A++ Y  M R G++P+    ++L D
Sbjct: 252 DMMQQALKFYVDMRRLGLVPNEHTYTSLVD 281



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A +LFG++   G+ P++ +Y  +I G+     +D A++L +++    +KP+ + +  
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I + C   +++ A ++ ++M EKG KAN   Y+ L+D YFKS+N      + EEM E +
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELD 443

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           I    V++ +LIDGLCK  L+ +A+ Y    + D  L  +   Y  +I G CK  +   A
Sbjct: 444 IEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAA 503

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
             L++ M + G++PD    ++L D  L+
Sbjct: 504 TTLFEQMAQKGLVPDRTAYTSLIDGKLK 531



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 95/181 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  ALK +  +   GL P+  TY +++  YC +  L +A +L ++++ V ++ N +
Sbjct: 250 KEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVV 309

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  C   R+ +A  +F KM+  G   N+ +Y+ LI G+ K++NM  A ++ +EM
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM 369

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+++ Y   I  LC    +E A    +   +  +  +   Y  L+  Y K+  P
Sbjct: 370 KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENP 429

Query: 184 T 184
           +
Sbjct: 430 S 430



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 1/198 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K  ++D AL+L  ++  RG++PD++ Y T I   C L +++ A  +  ++    +K N
Sbjct: 353 FVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKAN 412

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +T L+DA+ K     +   +  +MLE   +   VT+  LIDG  K++ +  A D + 
Sbjct: 413 TFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFG 472

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +  +  +  N   Y+ +IDGLCK   +E A   F       L+PD   Y  LI G  K 
Sbjct: 473 RISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQ 532

Query: 181 GRPTEAMQLYDSMLRNGI 198
           G   +A+ L D M   G+
Sbjct: 533 GNVVQALALRDKMAEIGV 550


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 114/193 (59%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF  +    L PD ++YNT+I G C   RL EA +LF+++   + KPNS+TF+ LID
Sbjct: 148 AMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALID 207

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G +++   +  +M + G + +V  YS LI G+    +++   +++ EM   N++P
Sbjct: 208 GFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTP 267

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L++ LCK+   +EA           + PDVV Y +L  G  K GR ++A+++ 
Sbjct: 268 NVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVL 327

Query: 191 DSMLRNGIMPDGL 203
           D M++ G  P+ +
Sbjct: 328 DLMVKRGEEPNNV 340



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 2/216 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC--VQLK 59
           L KE  +D AL +   +  +G +PD++TY+T++ G C + ++DEAV L   L      +K
Sbjct: 349 LCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIK 408

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+   F ++I   CK+ R+  A  ++  M+E+G  +N+VTY+ LIDGY  +  +  A ++
Sbjct: 409 PDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +++  ++ ISPN  +Y++LI+GLCK  ++  A   F+    +   P V  Y  L+   C+
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
                +A  L+  M      PD +  + + D  L++
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKA 564



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 124/214 (57%), Gaps = 1/214 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A +++  + +RG   +I+TYN +I GY S  +L +A++L++      + PN
Sbjct: 421 LCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPN 480

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+T+LI+  CK   +  A  +F+K    G +  V  Y+ L+    +  +++ A ++++
Sbjct: 481 AATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQ 540

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N  P++VS++I+IDG  K G +E A       L+ +L+PD +T++ILI  + K G
Sbjct: 541 EMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLL-STLADYNLQ 214
           +  EA  LY+ M+  G +PD +L  S L  Y+L+
Sbjct: 601 QLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 113/209 (54%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A ++   +T   + PD++ Y  +  G     R  +A+++ + +     +PN
Sbjct: 279 LCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPN 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +I+  CKEGR+DDA  +   M +KG K +VVTYS L+ G      +  A D+  
Sbjct: 339 NVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398

Query: 122 EMC--ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +   E +I P++ +++++I  LCK+  +  A   ++  ++     ++VTY ILI GY  
Sbjct: 399 LLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLS 458

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           AG+ T+A++L+   + +GI P+    + L
Sbjct: 459 AGKLTKALELWKDAVDSGISPNAATYTVL 487



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 2/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++    L  ++   GLE D+  Y+ +I G+CS   ++   +LF ++    + PN +
Sbjct: 211 KNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ L++A CK+ +  +A  M   M     + +VV Y+ L DG  K+     A  V + M
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PN V+Y+ +I+GLCK G +++AL            PDVVTY+ L++G C  G+ 
Sbjct: 331 VKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390

Query: 184 TEAMQLYDSMLRN--GIMPD 201
            EA+ L + ++     I PD
Sbjct: 391 DEAVDLLNLLMSKEFHIKPD 410



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 107/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G +  RG   ++  +N ++ G+C      +A+ LF  +    L P+ +++  +I+
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK  R+ +A  +F +M     K N VT+S LIDG+ K+ +++  F + EEM +  +  
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  YS LI G C +G +E     F+  L  ++ P+VVTY+ L+   CK  +  EA Q+ 
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D+M    + PD +  + LAD
Sbjct: 293 DTMTGCKVRPDVVAYTVLAD 312



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 103/201 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL+L+    D G+ P+  TY  +I G C +  L  A  LF K      +P    +  
Sbjct: 462 LTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNT 521

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ + C+E  ++ A  +F +M       +VV+++ +IDG  K+ +++SA ++  EM   N
Sbjct: 522 LMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMN 581

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ +++SILI+   K G ++EA   +   +    +PD V +  L++GY   G+  + +
Sbjct: 582 LVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVV 641

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   M    ++ D  L ST+
Sbjct: 642 SMLQQMADKDVVLDSKLTSTI 662



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 88/184 (47%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P   + NT+I         D  + +  K+  V + P   + + LI++F    +   A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              ++++G   NV  ++ L+ G+ +S +   A D++  M  N + P+ VSY+ +I+GLCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              + EA   F         P+ VT++ LI G+CK G   E   L + M + G+  D  +
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 205 LSTL 208
            S L
Sbjct: 237 YSAL 240



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 6/172 (3%)

Query: 43  LDEAVQLFEKLTCVQLKPNSI----TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           L E++  F     +Q  PNSI    +   LID   K    D    + SKM          
Sbjct: 38  LSESLSHFHH--TLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFT 95

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           + S LI+ +  +Q    AF V   + +     N+ ++++L+ G C+ G   +A+  F   
Sbjct: 96  SLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMM 155

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             N L+PD V+Y  +I G CK  R  EA +L+  M      P+ +  S L D
Sbjct: 156 KRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALID 207



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 71/127 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A  LF ++ +   +PD++++N II G      ++ A +L  ++  + L P+
Sbjct: 526 LCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPD 585

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITF+ILI+ F K G++D+A  ++ +M+  G   + V +  L+ GY      +    + +
Sbjct: 586 NITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQ 645

Query: 122 EMCENNI 128
           +M + ++
Sbjct: 646 QMADKDV 652


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 122/200 (61%), Gaps = 4/200 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA++L   +  V LKPN++
Sbjct: 255 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 314

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 315 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 374

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
            E+     + +Y+I++ GLCK  L ++AL  F   C +D  L  +  T+ I+I    K G
Sbjct: 375 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL--EARTFNIMIDALLKVG 432

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L+ +   NG++P+
Sbjct: 433 RNDEAKDLFVAFSSNGLVPN 452



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 15/208 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITF 65
           DA   +  ++T+ G  P++ +YN ++ G C  NR  EA++L   +   +     P+ +++
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD------- 118
           T +I+ F KEG  D A   + +ML++G   +VVTYS +I    K Q M   +        
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRV 259

Query: 119 -----VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
                +++ M    + P+I++YS LIDG C  G M+EA+      +   L P+ VTY+ L
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 319

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           I GYCK  R  +A+ L+  M  +G+ PD
Sbjct: 320 INGYCKISRMEDALVLFKEMESSGVSPD 347



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 16/221 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNS 62
           +   LD      G +  +G   + IT+  ++ G C+  R  +A+ +   ++T +   PN 
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            ++  L++  C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  
Sbjct: 159 FSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 120 YEEMCENNISPNIVSYSILIDGL------------CKRGLMEEALYAFHCALDNHLLPDV 167
           Y EM +  I P++V+YS +I  L            CK G + E+   F   +   + PD+
Sbjct: 219 YHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDI 278

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +TY+ LI GYC AG+  EAM+L   M+  G+ P+ +  STL
Sbjct: 279 ITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 319



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 23/196 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             KE   D A   + ++ DRG+ PD++TY++II   C    +D              KP 
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMD--------------KPW 251

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S          CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  +  
Sbjct: 252 S---------HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLS 302

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN V+YS LI+G CK   ME+AL  F     + + PD++TY I+++G  +  
Sbjct: 303 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 362

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A +LY  +  +G
Sbjct: 363 RTAAAKELYVRITESG 378



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 19/220 (8%)

Query: 10  AALKLFGQLTDRGLE---PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           AA+  + ++   G +   PD+ TY  +I   C   RLD        +     +  +ITFT
Sbjct: 67  AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFT 126

Query: 67  ILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            L+   C + R  DA  ++  +M E G   NV +Y+ L++G       + A ++   M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMAD 186

Query: 126 N---NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG------ 176
           +      P++VSY+ +I+G  K G  ++A   +H  LD  +LPDVVTY+ +I        
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQA 246

Query: 177 ------YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 +CK GR  E+ +L+D M+R G+ PD +  STL D
Sbjct: 247 MDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 286



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 112/209 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL   +   GL+P+ +TY+T+I GYC ++R+++A+ LF+++    + P+ IT+ I
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 353

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++ ++ E G +  + TY+ ++ G  K++    A  +++ +C  +
Sbjct: 354 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 413

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+ID L K G  +EA   F     N L+P+  TY ++       G   E  
Sbjct: 414 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 473

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           QL+ SM  NG   D  +L+ +    LQ +
Sbjct: 474 QLFLSMEDNGCTVDSGMLNFIVRELLQRA 502



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 6/115 (5%)

Query: 79  DDATMMFSKMLEKGPKANVVTYS-CLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVS 134
           +DA  +F ++L +G  A++   +  L D      +  +A   Y  M     + ++P++ +
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           Y ILI   C+ G ++    A    +      + +T+  L++G C   R ++AM +
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 110/191 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+ G +  +G  P ++ +N +I G+C    LD A +L E +      PN  TFTI
Sbjct: 213 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK  R+ +A  +  KM+  G   NVVTYS +I+G  K   +  A+++++ M   N
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ILIDGLCK   +EEA   +H   +    PD++TY  LI G CK+ +  EA 
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392

Query: 188 QLYDSMLRNGI 198
           QL+ ++  +G+
Sbjct: 393 QLFQTIPESGV 403



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L  ++   G  P+++TY+T+I G C   ++D+A +LF+ +      PN
Sbjct: 277 LCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 336

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  ILID  CK  R+++A  ++ +M E G   +++TY+ LIDG  KS  +  AF +++
Sbjct: 337 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 396

Query: 122 EMCENNIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + E+ +S  N V+YS L  G    G M +A   F   +D    PD+ TY  LI  YCK 
Sbjct: 397 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 456

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            R  E ++L + M   G  P
Sbjct: 457 SRAVEVVELVEEMASKGFPP 476



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 116/245 (47%), Gaps = 36/245 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---------- 51
           L K    D A  +  ++  +G  PD +T++T+I G C     ++A ++ E          
Sbjct: 136 LCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS 195

Query: 52  -------------KLTCVQLK-------------PNSITFTILIDAFCKEGRMDDATMMF 85
                        K   V+L              P  + F ++I+ FCK   +D A  + 
Sbjct: 196 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 255

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M+EKG   NV T++ LI G  K+  +  A  + E+M     SPN+V+YS +I+GLCK+
Sbjct: 256 EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQ 315

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +++A   F      +  P+VVT+ ILI G CKA R  EA QLY  M   G  PD +  
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 206 STLAD 210
           ++L D
Sbjct: 376 NSLID 380



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 37/237 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++L  ++   G E + + + T++ G C   R+ EA++ F  +      P+ +T+T 
Sbjct: 73  LDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTA 131

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A CK G+ D+A  M  +M+ +G   + VT+S LIDG  K  + + AF V E++ +  
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191

Query: 128 I------------------------------------SPNIVSYSILIDGLCKRGLMEEA 151
           +                                    +P ++ ++++I+G CK   ++ A
Sbjct: 192 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 251

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                  ++   +P+V T+ ILI G CKA R  EA QL + M+  G  P+ +  ST+
Sbjct: 252 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTV 308



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 3/198 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL---TCVQLKPNSI 63
           H + A++LF  +  RG   D + YN ++ G    ++ D+A+ + E++      +  P+S 
Sbjct: 493 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSS 552

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
               L+++ C+ G+ DDA  +  KM E+G  A V +Y+ L+ G  + Q    A  V+E M
Sbjct: 553 AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAM 612

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                +P I + +++I  LC    +++A             PD+ T   LI GYCK+GR 
Sbjct: 613 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 672

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A +L + M   G+ P+
Sbjct: 673 DLARKLLEEMTEAGLEPN 690



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 1/161 (0%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C LNR  EA+ LF         PN  T+ ILI  F   G +D A  +  +M   G + N 
Sbjct: 33  CRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNA 92

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           V ++ L+ G   +  +  A + +  M + + +P++++Y+ L+  LCK G  +EA      
Sbjct: 93  VVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLRE 151

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
            +     PD VT++ LI G CK G   +A ++ + +++ G+
Sbjct: 152 MVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           E V LF      ++  N  +    +D  C+  R  +A  +F   + +    N  TY  LI
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G+  + ++  A  + EEM  +    N V ++ L+ GLC  G + EAL  F  A+     
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFR-AMAKDCA 123

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           PDV+TY  L+   CKAG+  EA  +   M+  G  PD +  STL D  L   GS+E 
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLID-GLCKFGSEEQ 179



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 10/220 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEP-DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +D A +LF  + + G+   + +TY+T+  GY +L R+ +A ++F  L      P
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+T LI  +CK  R  +   +  +M  KG    V T S ++ G F+  + + A  ++
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 501

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRGY 177
           + M     + + + Y+++++G+ +    ++AL      +D       P       L+   
Sbjct: 502 DSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESL 561

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           C+ G+  +A QL   M   G        + ++ YN   SG
Sbjct: 562 CQVGKTDDAKQLLHKMSERG------FAAAVSSYNRLLSG 595



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +L  ++++RG    + +YN ++ G   L R DEA Q+FE +      P   T  ++
Sbjct: 568 DDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 627

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C   ++DDA  +  +M + G   ++ T + LI GY KS     A  + EEM E  +
Sbjct: 628 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687

Query: 129 SPNIVSYSIL 138
            PN  ++ +L
Sbjct: 688 EPNDTTHDLL 697



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/231 (19%), Positives = 93/231 (40%), Gaps = 42/231 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---------------------------- 42
           A ++F  L D+G  PD+ TY ++I  YC  +R                            
Sbjct: 427 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 486

Query: 43  -------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK---- 91
                   + A+QLF+ +       +++ + ++++   +  + D A  +  ++++K    
Sbjct: 487 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRK 546

Query: 92  -GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
             P ++ V    L++   +      A  +  +M E   +  + SY+ L+ GL +    +E
Sbjct: 547 FNPSSSAV--DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDE 604

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           A   F   +     P++ T  ++I   C A +  +A +L   M + G  PD
Sbjct: 605 ATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L     +D A +L  +++  G  PDI T NT+I GYC   R D A +L E++T   L+PN
Sbjct: 631 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690

Query: 62  SITFTIL 68
             T  +L
Sbjct: 691 DTTHDLL 697


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ PDI TY ++I   C+L        L  ++   ++ P+
Sbjct: 219 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 278

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+ +G + NVVTY+ L+DG+     M  A  V++
Sbjct: 279 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 338

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N  +PN++SY+ LI+G CK   M++A Y F       L+P+ VTY  L+   C  G
Sbjct: 339 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVG 397

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R  +A+ L+  M+ +G +PD      L DY
Sbjct: 398 RLQDAIALFHEMVAHGQIPDLATYRILLDY 427



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 105/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
               L  Q+   G+ PD+ T N +I  +C LNRL  A  +  K+  +  +P++ TFT LI
Sbjct: 87  TVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLI 146

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C EG++ DA  +F KM+ +G + NVVTY  LI+G  K  N  +A  +   M + N  
Sbjct: 147 RGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ 206

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C          L
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+ + IMPD ++ ST+ D
Sbjct: 267 LNQMINSKIMPDVVIFSTVVD 287



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 40/254 (15%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  +D A+K+F  +   G  P++I+YNT+I GYC + R+D+A  LFE++   +L PN++T
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL--------------------- 103
           +  L+   C  GR+ DA  +F +M+  G   ++ TY  L                     
Sbjct: 387 YNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 104 --------------IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                         IDG  ++  +++A D++  +    + PN+ +Y+I+I+GLC+RGL++
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD----GLLL 205
           EA   F     N   PD  TY  + +G  +      A+QL   ML  G   D     LL+
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565

Query: 206 STLADYNLQSSGSQ 219
             L D  L  S  Q
Sbjct: 566 EMLCDDKLDQSVKQ 579



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 114/206 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G +P+++TY T+I G C +   + A++L   +     +P+ + 
Sbjct: 152 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T +ID+ CK+ ++ +A  +FSKM+ +G   ++ TY+ LI         K    +  +M 
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I P++V +S ++D LCK G + EA       +   + P+VVTY  L+ G+C      
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 331

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA++++D+M+ NG  P+ +  +TL +
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLIN 357



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 3/208 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL+    A  +  ++   G +PD  T+ T+I G C   ++ +A+ LF+K+     +PN 
Sbjct: 115 CHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNV 174

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LI+  CK G  + A  +   M +   + +VV Y+ +ID   K + +  AF+++ +
Sbjct: 175 VTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSK 234

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP+I +Y+ LI  LC     +      +  +++ ++PDVV ++ ++   CK G+
Sbjct: 235 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 294

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            TEA  + D M+  G+ P+ +  + L D
Sbjct: 295 ITEAHDVVDMMIIRGVEPNVVTYNALMD 322



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F ++      P  + +N ++       +      L  ++    + P+  T  I
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + TEA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  GI PD    ++L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSL 250



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 76/146 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ HLD A+ L   +    ++PDI  Y  +I G C    L+ A  +F  L+   L+PN
Sbjct: 428 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI+I+  C+ G +D+A  +F +M   G   +  TY+ +  G  +++    A  + +
Sbjct: 488 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 547

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L++ LC   L
Sbjct: 548 EMLARGFSADVSTTTLLVEMLCDDKL 573



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 90/183 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +++N       + N LD+A+  F ++  +   P+++ F  L+ +  K  +      + ++
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G   +V T + LI+ +     +  AF V  ++ +    P+  +++ LI GLC  G 
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + +AL+ F   +     P+VVTY  LI G CK G    A++L  SM +    PD ++ ++
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 208 LAD 210
           + D
Sbjct: 215 IID 217



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 38/83 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A KLF ++   G  PD  TYNTI  G         A+QL +++       +  T T+
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 563

Query: 68  LIDAFCKEGRMDDATMMFSKMLE 90
           L++  C +        + S+ ++
Sbjct: 564 LVEMLCDDKLDQSVKQILSEFVQ 586


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y 
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYX 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDXVAYTAL 352



 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A++++ ++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGYVP 414



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +I+   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 XVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 118/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  L  ++++ G+ PD+ TY  +I G C + R+++A  +FEK+    +KPN++ FTI
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CK+G  +    +  +M E+G + + VTY+ +++G  +++++KSA  +  EM    
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+Y+ LIDG CK   ++ A+      +   +  D VTY  LI G  KAGR  +A 
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++   M+  G+ PD    + + D
Sbjct: 347 RVLGEMMEAGLEPDNTTYTMVID 369



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +  L+L  ++ +RG+ PD +TYN I+ G C    L  A  +  ++    L+P+++
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID +CKE  +D A  +   M+ +G   + VTY+ LI G  K+     A  V  EM
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+++ID  C++G ++  L       +    P VVTY +++ G+CK G+ 
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 412

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L ++M+  G+ PD +  + L D
Sbjct: 413 KNADMLLNAMINIGVSPDDITYNILLD 439



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L +A  +F ++  RG+   ++++NT+I G C    LD A  L  +++   + P+
Sbjct: 126 LVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPD 185

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C+ GR++DA  +F KM  +G K N V ++ LID + K  + ++  +++ 
Sbjct: 186 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHR 245

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + P+ V+Y+ +++GLC+   ++ A           L PD VTY  LI GYCK  
Sbjct: 246 EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEE 305

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               AM++  +M+  G+  D +  + L
Sbjct: 306 ELDMAMEIKQNMVAEGVGLDEVTYTAL 332



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 108/194 (55%), Gaps = 3/194 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A  +  ++   GL PD +TY T+I GYC    LD A+++ + +    +  + +T+T 
Sbjct: 272 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 331

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K GR  DA  +  +M+E G + +  TY+ +ID + +  ++K+   + +EM    
Sbjct: 332 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 391

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P +V+Y+++++G CK G M+ A    +  ++  + PD +TY IL+ G+CK G+ T+  
Sbjct: 392 RKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIE 451

Query: 188 QLYDSMLRNGIMPD 201
           +L  +    G +PD
Sbjct: 452 ELKSA---KGTVPD 462



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 95/194 (48%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           QL D GL P+   +N ++     L  L  A  +F+++    ++   ++F  +I   C+ G
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A  +  +M E G   +V TY  LI G  +   ++ A  V+E+MC   + PN V ++
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ILID  CK+G  E  L       +  + PD VTY  ++ G C+A     A  +   M   
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285

Query: 197 GIMPDGLLLSTLAD 210
           G+ PD +  +TL D
Sbjct: 286 GLRPDTVTYTTLID 299



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 83/143 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+++   +   G+  D +TY  +I G     R  +A ++  ++    L+P++ 
Sbjct: 303 KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 362

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++IDAFC++G +     +  +M  KG K  VVTY+ +++G+ K   MK+A  +   M
Sbjct: 363 TYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 422

Query: 124 CENNISPNIVSYSILIDGLCKRG 146
               +SP+ ++Y+IL+DG CK G
Sbjct: 423 INIGVSPDDITYNILLDGHCKHG 445



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 84/166 (50%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           EA   + +L    L P +  F +L+    + G +  A  +F +M  +G +  VV+++ +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  ++ ++  A  ++  M E  ++P++ +Y  LI GLC+ G +E+A   F       + 
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P+ V + ILI  +CK G     ++L+  M   G+ PD +  + + +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVN 264



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           ++L+P S T   L+  F       +A   + ++L+ G       ++ L+    +   + S
Sbjct: 80  IRLEPTSCTG--LMSRFPTA---PEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELAS 134

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A +V++EM    +   +VS++ +I G+C+ G ++ A        +  + PDV TY  LI+
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           G C+ GR  +A  +++ M   G+ P+ ++ + L D + +   ++
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 122/200 (61%), Gaps = 4/200 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++P++ITYNT+I GYC   ++DEA++L   +  V LKPN++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
            E+     + +Y+I++ GLCK  L ++AL  F   C +D  L  +  T+ I+I    K G
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL--EARTFNIMIDALLKVG 665

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L+ +   NG++P+
Sbjct: 666 RNDEAKDLFVAFSSNGLVPN 685



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 9/223 (4%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL P  I YN++I G C+ N+ + A +L  ++    +  
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +ID+ CKEGR+ ++  +F  M+  G K NV+TY+ LI+GY  +  M  A  + 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + PN V+YS LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 181 GRPTEAMQLYDSMLRNG---------IMPDGLLLSTLADYNLQ 214
            R   A +LY  +  +G         I+  GL  + L D  LQ
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+++L+D  CK GR  +A  +F  M ++G K  + TY  L+ GY     +     + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+   +SILI    K+G +++A+  F       L P+ VTY  +I   CK+G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ P  ++ ++L
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSL 447



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T +   PN  ++
Sbjct: 102 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            IL+   C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  Y E
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I P++V+Y+ +I  LCK   M++A+   +  + N ++PD +TY  ++ GYC +G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           P EA+     M  +G+ PD +  S L DY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 37/234 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + P+   F+ILI 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+G++D A ++FSKM ++G   N VTY  +I    KS  ++ A   +E+M +  +SP
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 131 NIVSYSILIDGLCK----------------RGLMEEALYAFHCALDNH------------ 162
             + Y+ LI GLC                 RG+    ++ F+  +D+H            
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKL 498

Query: 163 --------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                   + P+V+TY  LI GYC AG+  EAM+L   M+  G+ P+ +  STL
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL P+ +TY  +I   C   R+++A+  FE++    L P +I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI   C   + + A  +  +ML++G   N + ++ +ID + K   +  +  ++E M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+++Y+ LI+G C  G M+EA+      +   L P+ VTY+ LI GYCK  R 
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 563 EDALVLFKEMESSGVSPD 580



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   + D    G  PD+++Y T+I G+      D+A   + ++    + P+ +T+  
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A CK   MD A  + + M++ G   + +TY+ ++ GY  S   K A    ++M  + 
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS+L+D LCK G   EA   F       L P++ TY  L++GY   G   E  
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L D M+RNGI PD  + S L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSIL 377



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL   +   GL+P+ +TY+T+I GYC ++R+++A+ LF+++    + P+ IT+ I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++ ++ E G +  + TY+ ++ G  K++    A  +++ +C  +
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+ID L K G  +EA   F     N L+P+  TY ++       G   E  
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           QL+ SM  NG   D  +L+ +    LQ
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQ 733



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 8/198 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV---QLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P+  T+ I
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALAD-VARDSPAAAVSRYNRMARAGADEVTPDLCTYGI 92

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCEN 126
           LI   C+ GR+D        +++KG + + + ++ L+ G    +    A D V   M E 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRGYCKAGRP 183
              PN+ SY+IL+ GLC     +EAL   H   D+      PDVV+Y  +I G+ K G  
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A   Y  ML  GI+PD
Sbjct: 213 DKAYSTYHEMLDRGILPD 230



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 82/183 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL LF ++   G+ PDIITYN I+ G     R   A +L+ ++T    +    
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I++   CK    DDA  MF  +     K    T++ +ID   K      A D++   
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N + PN  +Y ++ + +  +GL+EE    F    DN    D      ++R   + G  
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737

Query: 184 TEA 186
           T A
Sbjct: 738 TRA 740



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 79  DDATMMFSKMLEKGPKANVVTYS-CLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVS 134
           +DA  +F ++L +G  A++   +  L D      +  +A   Y  M     + ++P++ +
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALAD--VARDSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSM 193
           Y ILI   C+ G ++    A    +      D + +  L++G C   R ++AM +    M
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 194 LRNGIMPD----GLLLSTLADYN 212
              G +P+     +LL  L D N
Sbjct: 150 TELGCIPNVFSYNILLKGLCDEN 172


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 115/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ Q+  + + PD+ITYNT++ G   + RL EAV LF ++    +KP+  TF IL+D
Sbjct: 138 AFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVD 197

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEG M  A  + + M+++    +V+TY+ L+DGYF  +    A  V+  M    ++P
Sbjct: 198 GLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTP 257

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ SYS++I+GLCK  +++EA+          + P+ VTY+ LI G  K+GR  +A  L 
Sbjct: 258 DVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLV 317

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M   G   D +  ++L D
Sbjct: 318 NEMHNRGQPADVITYNSLLD 337



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  + ++PD+ITYN+++ GY  + + ++A  +F  +    + P+
Sbjct: 199 LCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 258

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +++++I+  CK   +D+A  +  +M  K    N VTYS LIDG  KS  +  A+D+  
Sbjct: 259 VHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVN 318

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       ++++Y+ L+D LCK   +++A+       D  + PD+ TY IL+ G CK G
Sbjct: 319 EMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNG 378

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           R  +A ++Y  +L  G   D L    L+
Sbjct: 379 RLKDAQEVYQILLIKGYHLDSLFDKALS 406



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 112/212 (52%), Gaps = 21/212 (9%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +F  +  RG+ PD+ +Y+ +I G C    +DEAV L +++    + PN++T++ L
Sbjct: 241 NKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSL 300

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID   K GR+ DA  + ++M  +G  A+V+TY+ L+D   K+  +  A  +  ++ +  I
Sbjct: 301 IDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI 360

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCAL---------------------DNHLLPDV 167
            P+I +Y+IL+DGLCK G +++A   +   L                     DN   P+ 
Sbjct: 361 QPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNP 420

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           VT+ ILIR   +     +A++L   M+  G++
Sbjct: 421 VTFEILIRALFENDMNDKAVELLREMIARGLL 452



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 103/181 (56%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G + + ++Y T+I G C       A+Q+   +  + ++PN + ++ +I + CK+  + D
Sbjct: 78  KGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVID 137

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  ++S+ML K    +V+TY+ L+ G      +K A  ++ +M   NI P+I +++IL+D
Sbjct: 138 AFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVD 197

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLCK G M++A       +   + PDV+TY  L+ GY    +  +A  ++++M R G+ P
Sbjct: 198 GLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTP 257

Query: 201 D 201
           D
Sbjct: 258 D 258



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 111/208 (53%), Gaps = 1/208 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA+++   +    ++P+++ Y+TII   C    + +A  L+ ++   ++ P+ IT+  L+
Sbjct: 102 AAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLM 161

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
                 GR+ +A  +F++ML K  K ++ T++ L+DG  K   MK A +V   M + ++ 
Sbjct: 162 YGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVD 221

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++++Y+ L+DG        +A + F+      + PDV +Y+++I G CK     EA+ L
Sbjct: 222 PDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNL 281

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              M    + P+ +  S+L D  L  SG
Sbjct: 282 LKEMHSKSMAPNTVTYSSLID-GLHKSG 308



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 6/192 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG------RM 78
           P I  +  I      +N     + L  ++    ++ + +   IL++ FC  G      ++
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
            +       ++ KG + N V+Y  LIDG  K+   ++A  V   +    + PN+V YS +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I  LCK  L+ +A   +   L   + PDV+TY  L+ G    GR  EA+ L++ ML   I
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 199 MPDGLLLSTLAD 210
            PD    + L D
Sbjct: 186 KPDIYTFNILVD 197



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 21/112 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL------------------ 43
           L K   +D A+ L  ++ D+G++PDI TY  ++ G C   RL                  
Sbjct: 339 LCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLD 398

Query: 44  ---DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
              D+A+ L  K+      PN +TF ILI A  +    D A  +  +M+ +G
Sbjct: 399 SLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARG 450


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 119/204 (58%), Gaps = 2/204 (0%)

Query: 7   HLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSIT 64
            + AAL +  ++ +RG + P+  TY T+I G+C + R+DEAV++F E LT  ++KP ++ 
Sbjct: 87  RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 146

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +C +G++D A +   +M+E+G    V TY+ L+   F       A+++ EEM 
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              ++P++ +Y+ILI+G CK G +++AL  F       +   VVTY  LI    K G+  
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 266

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L+D  +R GI PD +L + L
Sbjct: 267 ETDKLFDEAVRRGIRPDLVLYNAL 290



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  +GL PD+ TYN +I G+C    + +A+++FE ++   ++   +T+T LI 
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+G++ +   +F + + +G + ++V Y+ LI+ +  S N+  AF++  EM +  I+P
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+ GLC  G ++EA           + PD+VTY  LI GY   G   +A+++ 
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 377

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
           + M+  G  P      TL  YN
Sbjct: 378 NEMMNKGFNP------TLLTYN 393



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 36/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLD------------------ 44
           K   +D A+K+F ++  +G ++P+ + YN +I GYC   +LD                  
Sbjct: 120 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 179

Query: 45  -----------------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                            EA +L E++    L P+  T+ ILI+  CKEG +  A  +F  
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G +A VVTY+ LI    K   ++    +++E     I P++V Y+ LI+     G 
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++ A           + PD VTY  L+RG C  GR  EA +L D M + GI PD +  +T
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 208 L 208
           L
Sbjct: 360 L 360



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 96/175 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KLF +   RG+ PD++ YN +I  + +   +D A ++  ++   ++ P+
Sbjct: 259 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 318

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   C  GR+D+A  +  +M ++G + ++VTY+ LI GY    ++K A  +  
Sbjct: 319 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 378

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM     +P +++Y+ LI GLCK G  ++A       ++N + PD  TY  LI G
Sbjct: 379 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 3/155 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A ++ G++  + + PD +TYNT++ G C L R+DEA +L +++T   ++P+ +T+ 
Sbjct: 299 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 358

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +  +G + DA  + ++M+ KG    ++TY+ LI G  K+     A ++ +EM EN
Sbjct: 359 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 418

Query: 127 NISPNIVSYSILIDGLC---KRGLMEEALYAFHCA 158
            I+P+  +Y  LI+GL    +R + +E L A   A
Sbjct: 419 GITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 453


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F ++  RGL P  +++NT+I G C    LDE  +L + +   ++ P+  
Sbjct: 235 KEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVF 294

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI   CKEGR+D A  +F +M ++G + N +T++ LIDG  +S+ + SA + Y +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V Y+ L++GLCK G + +A           + PD +TY  LI GYCK G  
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             AM++   M   G++ D +  + L
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTAL 439



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A KL  ++   G++PD ITY T+I GYC    L+ A+++ + +    +  +
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ FT LI  FC++GR+ DA     +M+E G K +  TY+ +IDGY K  N+K  F + +
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N   P +++Y++L++GLCK+G M+ A       L+  + PD +TY IL+ G+CK G
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552

Query: 182 RPTEAMQLYDSMLRNGIMPD-GLLLSTLADYN 212
           +  + ++L +     G++ D     S +++YN
Sbjct: 553 KAEDLLKLRNE---KGLIVDYAYYTSLVSEYN 581



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 116/202 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+A+  + Q+   G++PD++ YNT++ G C +  +++A +L +++  V +KP+ IT+T
Sbjct: 343 RIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYT 402

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CKEG ++ A  +   M E+G   + V ++ LI G+ +   ++ A     EM E 
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+  +Y+++IDG CK+G ++           N   P V+TY +L+ G CK G+   A
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNA 522

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L ++ML  G+ PD +  + L
Sbjct: 523 NMLLEAMLNLGVTPDDITYNIL 544



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +LD   +L   + +  + PD+ TY+ +I G C   RLD A QLF+++    L+PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITFT LID  C+  R+D A   + +ML  G K ++V Y+ L++G  K  ++  A  + +
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+ ++Y+ LIDG CK G +E A+       +  ++ D V +  LI G+C+ G
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A +    M+  G+ PD    + + D
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVID 476



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 109/199 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A +LF ++  RGL P+ IT+  +I G C   R+D A+  + ++  + +KP+
Sbjct: 303 LCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPD 362

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  L++  CK G ++ A  +  +M   G K + +TY+ LIDGY K  +++SA ++ +
Sbjct: 363 LVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  +  + V+++ LI G C+ G + +A       ++  + PD  TY ++I GYCK G
Sbjct: 423 GMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKG 482

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  NG  P
Sbjct: 483 NVKMGFKLLKEMQINGHKP 501



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 102/197 (51%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ + G  P +  YN +I  +C    + +A  +F ++    L+P +++F  LI+  C
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   +D+   +   M E     +V TYS LI G  K   +  A  +++EM +  + PN +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LIDG C+   ++ A+  +H  L   + PD+V Y  L+ G CK G   +A +L D M
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 194 LRNGIMPDGLLLSTLAD 210
              G+ PD +  +TL D
Sbjct: 390 RMVGMKPDKITYTTLID 406



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 15/217 (6%)

Query: 2   LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+     D+A  +F  + D  G       ++ ++  Y     + +A+Q      C +L  
Sbjct: 127 LVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQ------CFRLVR 180

Query: 61  NSITFTI-------LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           NS  F I       L+D              +S++LE G    V  Y+ LI+ + K  ++
Sbjct: 181 NS-NFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSI 239

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           + A  ++ E+ +  + P  VS++ LI+GLCK   ++E         +N + PDV TY++L
Sbjct: 240 RDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVL 299

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I G CK GR   A QL+D M + G+ P+G+  + L D
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 122/200 (61%), Gaps = 4/200 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++P++ITYNT+I GYC   ++DEA++L   +  V LKPN++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
            E+     + +Y+I++ GLCK  L ++AL  F   C +D  L  +  T+ I+I    K G
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL--EARTFNIMIDALLKVG 665

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L+ +   NG++P+
Sbjct: 666 RNDEAKDLFVAFSSNGLVPN 685



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 9/223 (4%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL P  I YN++I G C+ N+ + A +L  ++    +  
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +ID+ CKEGR+ ++  +F  M+  G K NV+TY+ LI+GY  +  M  A  + 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + PN V+YS LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 181 GRPTEAMQLYDSMLRNG---------IMPDGLLLSTLADYNLQ 214
            R   A +LY  +  +G         I+  GL  + L D  LQ
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T +   PN  ++
Sbjct: 102 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            IL+   C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  Y E
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I P++V+Y+ +I  LCK   M++A+   +  + N ++PD +TY  ++ GYC +G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           P EA+     M  +G+ PD +  S L DY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+++L+D  CK GR  +A  +F  M ++G K  + TY  L+ GY     +     + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+   +SILI     +G +++A+  F       L P+ VTY  +I   CK+G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ P  ++ ++L
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSL 447



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 37/234 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + P+   F+ILI 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+  +G++D A ++FSKM ++G   N VTY  +I    KS  ++ A   +E+M +  +SP
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 131 NIVSYSILIDGLCK----------------RGLMEEALYAFHCALDNH------------ 162
             + Y+ LI GLC                 RG+    ++ F+  +D+H            
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKL 498

Query: 163 --------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                   + P+V+TY  LI GYC AG+  EAM+L   M+  G+ P+ +  STL
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 107/194 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F ++  +GL P+ +TY  +I   C   R+++A+  FE++    L P +I +  
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C   + + A  +  +ML++G   N + ++ +ID + K   +  +  ++E M    
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+++Y+ LI+G C  G M+EA+      +   L P+ VTY+ LI GYCK  R  +A+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 188 QLYDSMLRNGIMPD 201
            L+  M  +G+ PD
Sbjct: 567 VLFKEMESSGVSPD 580



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   + D    G  PD+++Y T+I G+      D+A   + ++    + P+ +T+  
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A CK   MD A  + + M++ G   + +TY+ ++ GY  S   K A    ++M  + 
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS+L+D LCK G   EA   F       L P++ TY  L++GY   G   E  
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L D M+RNGI PD  + S L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSIL 377



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL   +   GL+P+ +TY+T+I GYC ++R+++A+ LF+++    + P+ IT+ I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++ ++ E G +  + TY+ ++ G  K++    A  +++ +C  +
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+ID L K G  +EA   F     N L+P+  TY ++       G   E  
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           QL+ SM  NG   D  +L+ +    LQ
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQ 733



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 8/198 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV---QLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P+  T+ I
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALAD-VARDSPAAAVSRYNRMARAGADEVTPDLCTYGI 92

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCEN 126
           LI   C+ GR+D        +++KG + + + ++ L+ G    +    A D V   M E 
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRGYCKAGRP 183
              PN+ SY+IL+ GLC     +EAL   H   D+      PDVV+Y  +I G+ K G  
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A   Y  ML  GI+PD
Sbjct: 213 DKAYSTYHEMLDRGILPD 230



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 82/183 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL LF ++   G+ PDIITYN I+ G     R   A +L+ ++T    +    
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I++   CK    DDA  MF  +     K    T++ +ID   K      A D++   
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N + PN  +Y ++ + +  +GL+EE    F    DN    D      ++R   + G  
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737

Query: 184 TEA 186
           T A
Sbjct: 738 TRA 740



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 79  DDATMMFSKMLEKGPKANVVTYS-CLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVS 134
           +DA  +F ++L +G  A++   +  L D      +  +A   Y  M     + ++P++ +
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALAD--VARDSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSM 193
           Y ILI   C+ G ++    A    +      D + +  L++G C   R ++AM +    M
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 194 LRNGIMPD----GLLLSTLADYN 212
              G +P+     +LL  L D N
Sbjct: 150 TELGCIPNVFSYNILLKGLCDEN 172


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 115/191 (60%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            LK+F ++ + G+ P++I Y+++I G C + +L EAV LF+++    +K N IT+  LI 
Sbjct: 98  GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIH 157

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+ G   +AT  FS+M+ +G   +VVT++ LID   K   ++ A+ ++E M +   +P
Sbjct: 158 ASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAP 217

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+ L++GLC    M+ A+  F   ++  +  DV++Y  LI GYC +G+  EAM L+
Sbjct: 218 NIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277

Query: 191 DSMLRNGIMPD 201
             M    + P 
Sbjct: 278 RKMQYEELTPS 288



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 122/214 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A++LF  + +RG++ D+I+YNT+I GYC+  + +EA+ LF K+   +L P+  T+T
Sbjct: 234 QMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYT 293

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+ A  + GR+  A  +F+ M   G   ++ TY+ L+DG  K+  ++ A DV+  +   
Sbjct: 294 ILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSI 353

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+I  YSILI G+ +    E A+  F       L+P++VTY I+I G CK G+  EA
Sbjct: 354 KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEA 413

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +L+  M  +G   D +  + +    LQ +  Q+
Sbjct: 414 ERLFVQMEESGCEQDEISFNFIIRGFLQENQVQK 447



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 105/186 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ LF ++  +G++ ++ITYN++I   C      EA + F ++    + P+ +TFT 
Sbjct: 130 LREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTT 189

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID   K+G++ +A  +F  M+++G   N+VTY+ L++G      M  A  ++E M E  
Sbjct: 190 LIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG 249

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  +++SY+ LI+G C  G  EEA+  F       L P + TY IL++   + GR   A 
Sbjct: 250 IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAK 309

Query: 188 QLYDSM 193
           +L+++M
Sbjct: 310 ELFNNM 315



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 124/216 (57%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A K+F  +  +G  P+I+TYN+++ G C  +++D AV+LFE +    +K +
Sbjct: 194 LSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKID 253

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I++  LI+ +C  G+ ++A  +F KM  +    ++ TY+ L+   +++  +++A +++ 
Sbjct: 254 VISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFN 313

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     SP++ +Y++L+DGLCK G +EEA+  F         P +  Y+ILI G  +A 
Sbjct: 314 NMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQAR 373

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           R   AM+++D +   G++P+      +  YN+  +G
Sbjct: 374 RWESAMEIFDEIPTVGLVPN------IVTYNIMING 403



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 103/191 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+LF ++T  G + DI+ Y  +I       +   AV+L  ++       N  T+ ++ID
Sbjct: 28  ALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVID 87

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK+G       MF +M+  G   NV+ YS LI+G  +   ++ A ++++EM    I  
Sbjct: 88  SLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKA 147

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LI   C+ GL +EA   F   +   +LPDVVT+  LI    K G+  EA +++
Sbjct: 148 NVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIF 207

Query: 191 DSMLRNGIMPD 201
           + M++ G  P+
Sbjct: 208 ELMIKQGEAPN 218



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 104/199 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G +P+++T +T++ G C   ++ +A++LF+K+T    + + + +  LI+A  K  +   A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  +ML +    N  TY  +ID   K         ++ EM    I PN++ YS LI+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC+ G + EA+  F   +   +  +V+TY  LI   C+ G   EA + +  M+  GI+PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 202 GLLLSTLADYNLQSSGSQE 220
            +  +TL D+  +    QE
Sbjct: 184 VVTFTTLIDHLSKKGKVQE 202



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 105/195 (53%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           +  TY  +I   C      + +++F ++  + + PN I ++ LI+  C+ G++ +A  +F
Sbjct: 78  NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLF 137

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M+ +G KANV+TY+ LI    +    K A   + +M    I P++V+++ LID L K+
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++EA   F   +     P++VTY  L+ G C   +   A++L++ M+  GI  D +  
Sbjct: 198 GKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISY 257

Query: 206 STLADYNLQSSGSQE 220
           +TL +    S  ++E
Sbjct: 258 NTLINGYCTSGKTEE 272



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 72/124 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +F  L     +P I  Y+ +I G     R + A+++F+++  V L PN +T+ I
Sbjct: 340 IEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNI 399

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CKEG++ +A  +F +M E G + + ++++ +I G+ +   ++ A +  + M E N
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKN 459

Query: 128 ISPN 131
            SPN
Sbjct: 460 FSPN 463



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 35/155 (22%)

Query: 89  LEKGPKANVVTYSCLIDG-----------------------------------YFKSQNM 113
           ++ G + N+VT S L+ G                                     K++  
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           + A +++  M     S N  +Y ++ID LCK GL  + L  F   ++  + P+V+ Y+ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           I G C+ G+  EA+ L+D M+  GI  + +  ++L
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSL 155


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D AL+L   +  +G E D  T N I  G+C  NR +EA +L   +    + PN +
Sbjct: 379 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 438

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +F+ILID +CKE    +A  +F  M +KG   +VVTY+  I+ Y K   M+ A+ +  EM
Sbjct: 439 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 498

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+ LIDG    G ++ AL  F+      L  +VVTY ++I G  K GR 
Sbjct: 499 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRA 558

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +LYD M + GI+PD  + S+L
Sbjct: 559 DEAFKLYDEMNKEGIVPDDGIYSSL 583



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   ++ A KLF ++  +G+EPD+  Y +II   C    +  A  LF+++T  +L PN+ 
Sbjct: 274 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 333

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS---------QNM- 113
           T+  LI+  CK G M  A MM + M  KG   N V ++ L+DGY K          QN+ 
Sbjct: 334 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 393

Query: 114 -KSAFDV-----------------YEE-------MCENNISPNIVSYSILIDGLCKRGLM 148
            +  F++                  EE       M E  ++PN+VS+SILID  CK    
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 453

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F         P VVTY   I  YCK G+  EA +L + M   G+MPD    ++L
Sbjct: 454 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 513

Query: 209 ADYNLQSSGSQEHCI 223
            D   ++SG+ +  +
Sbjct: 514 ID-GERASGNVDRAL 527



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 119/222 (53%), Gaps = 6/222 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---LDEAVQLFEKLTCVQL 58
           L K+  +  A  L  +L  +G +P +ITYNT++ GY  +     ++E + L EK     +
Sbjct: 202 LCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV---V 258

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             N  T+T+LI+ + +  ++++A  +F +ML+KG + +V  Y+ +I+   K  NMK AF 
Sbjct: 259 DYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFV 318

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +++EM E  + PN  +Y  LI+G CK G M+ A    +      +  + V +  L+ GYC
Sbjct: 319 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 378

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           K G   EA++L + M + G   D    + +A    +S+  +E
Sbjct: 379 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 420



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  +++  ++   Q+ D G+E  + ++  ++ G C    +  A  L ++L C   KP+
Sbjct: 167 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 226

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L++ + +   +     + S M +     NV TY+ LI+ Y +S  ++ A  +++
Sbjct: 227 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 286

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I P++  Y+ +I+  CK G M+ A   F    +  L+P+  TY  LI G CKAG
Sbjct: 287 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 346

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  + + M   G+  + ++ +TL D
Sbjct: 347 EMKAAEMMVNDMQSKGVDVNRVIFNTLMD 375



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 98/173 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +L   + +RG+ P++++++ +I  YC      EA +LF+ +      P+ +T+   
Sbjct: 419 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 478

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ +CK+G+M++A  + ++M E+G   +  TY+ LIDG   S N+  A +++ EM +  +
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           + N+V+Y+++I GL K G  +EA   +       ++PD   Y+ LI    K G
Sbjct: 539 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 77/143 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A +LF  +  +G  P ++TYN  I  YC   +++EA +L  ++    L P++ 
Sbjct: 449 KEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTY 508

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID     G +D A  +F++M + G   NVVTY+ +I G  K      AF +Y+EM
Sbjct: 509 TYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEM 568

Query: 124 CENNISPNIVSYSILIDGLCKRG 146
            +  I P+   YS LI  L K G
Sbjct: 569 NKEGIVPDDGIYSSLIASLHKVG 591



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 76/145 (52%), Gaps = 6/145 (4%)

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + G M+       +M++ G +  V +++ ++DG  K   +  A  + +E+      P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 131 NIVSYSILIDGLCK---RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++++Y+ L++G  +    G + E L      + ++   +V TY +LI  Y ++ +  EA 
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY---NVTTYTMLIEWYSRSSKIEEAE 282

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYN 212
           +L+D ML+ GI PD  + +++ ++N
Sbjct: 283 KLFDEMLKKGIEPDVYIYTSIINWN 307


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 122/222 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  AL L  ++  +G +PD+ TYN++I G C ++R+DEA +LF  +       N
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LI A  + G    A  + + ML +G   + +TY+ LI  + K  N++   ++YE
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + +  + +S +I+I+GLCK G ++ A      A++   +PD+VTY  ++ G CK G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  EA+ L+D +   G+ PD    +T   +  +     + C+
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACL 691



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  +++ RG EP++ITY  ++ G C    L+EA  +  +++   L  N
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+ +  LI A C++ ++  A  + S+M  KG K ++ TY+ LI G  K   +  AF ++ 
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    N V+Y+ LI  L +RG  ++AL   +  L      D +TY  LI+ +CK G
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              + ++LY+ M+ +G+  D
Sbjct: 580 NIEKGLELYEQMIMDGLGAD 599



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 40/246 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL  ++  RG  PD +TY  ++ G C + +L+EA ++  K+ C    PN+     LI+
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLIN 362

Query: 71  AFCKEGRMDDATMMFSK-MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            +   G++ +A    ++ M+  G + ++ TY+ L+ G  K  ++  A D+  EM      
Sbjct: 363 GYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCE 422

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFH------------------CAL----DNHLL--- 164
           PN+++Y+IL++GLCK GL+EEA    H                  CAL      H+    
Sbjct: 423 PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNL 482

Query: 165 ----------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
                     PD+ TY  LI G CK  R  EA +L+ +ML +G + + +  +TL    L+
Sbjct: 483 LSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542

Query: 215 SSGSQE 220
               Q+
Sbjct: 543 RGAFQK 548



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 97/184 (52%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G +PDI TYN ++ G C    L  A  L  +++    +PN IT+ IL++  CK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +++A ++  +M  +G   N V Y+CLI    + + +  A ++  EMC     P++ +Y+ 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI GLCK   ++EA   FH  L +  + + VTY  LI    + G   +A+ L + ML  G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 198 IMPD 201
              D
Sbjct: 561 CTLD 564



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 32/234 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+A  L   +T  G  P+ I Y T+I      N++ EA++L E++  +   P+  TF 
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKG-------------------------------PKA 95
            +I   CK  ++ DAT +  +ML +G                               P  
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP 352

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEE-MCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           N    + LI+GY  S  +K A     E M      P+I +Y+IL+ GLCK G +  A   
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +        P+V+TYAIL+ G CKAG   EA  +   M   G+  + ++ + L
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +      +RG  PDI+TYN+++ G C + R+ EA+ LF++L    ++P+
Sbjct: 610 LCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPD 669

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+   I   CKEG ++DA + F + +E G   + +T++ L+    K  N ++ F V +
Sbjct: 670 AFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLD 729

Query: 122 EM 123
           E+
Sbjct: 730 EL 731



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 4/197 (2%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EP   +Y+ ++    + N    A  +F  +    + P   TF I++ A C    +D A  
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +   M + G   N + Y  LI    +   +  A  + EEM      P++ +++ +I GLC
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   + +A       L     PD +TY  L+ G C+ G+  EA ++   +      P+  
Sbjct: 300 KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNA 355

Query: 204 LLSTLADYNLQSSGSQE 220
           +L+TL +  + S   +E
Sbjct: 356 ILNTLINGYVMSGQLKE 372



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 73/151 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++  L+L+ Q+   GL  D I+ N +I G C + ++D A +           P+ +
Sbjct: 577 KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK GR+ +A  +F ++  +G + +  TY+  I    K   +  A   +   
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRG 696

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            EN   P+ +++++L+  L K+   E   + 
Sbjct: 697 IENGFVPSNLTWNVLVYTLLKQSNQENNFFV 727


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 117/198 (59%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  LK+  ++  +G E   +TYNTII G     RL++A+ L+  L      P   
Sbjct: 927  KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 986

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K GR++DA  +F++MLE G KAN   Y+ L++G+  + N +    ++++M
Sbjct: 987  TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 1046

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  I+P+I SY+I+ID LCK G + + L  F   L+  L PD++TY +LI G  K+ R 
Sbjct: 1047 VDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL 1106

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ L++ M + GI+P+
Sbjct: 1107 EEAVSLFNEMQKKGIVPN 1124



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   ++ A  LF ++ + G + +   YN ++ G+      ++   LF+ +    + P+
Sbjct: 995  LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1054

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TI+ID  CK G+++D    F ++LE G + +++TY+ LIDG  KS+ ++ A  ++ 
Sbjct: 1055 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 1114

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM +  I PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 1115 EMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSG 1174

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
                A   Y  M+  G +P+
Sbjct: 1175 STDSAYAAYGRMIVGGCLPN 1194



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 111/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  L L  ++   G++P++ +Y   I       R DEA ++  K+     KP+ I
Sbjct: 332 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T+LI   C  GR+ DA  +F KM +   K + VTY  L+D +  + + +S  +++  M
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 451

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N+V+Y+ +ID LC+ G + EAL  F       ++P+  +Y  LI G+ KA R 
Sbjct: 452 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 511

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            +A++L+  M  +G  P+G       +Y  +S  S
Sbjct: 512 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 546



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 103/201 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + ++++  +   G   +++ Y  +I   C + R+ EA+++F+++    + P   ++  LI
Sbjct: 443 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 502

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K  R  DA  +F  M   GPK N  T+   I+ Y KS     A   YE M    I 
Sbjct: 503 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 562

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+ + ++ GL K G +  A   FH      + PD +TY ++I+   KA +  EA+++
Sbjct: 563 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 622

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+ N  +PD L +++L D
Sbjct: 623 FYDMIENNCVPDVLAVNSLID 643



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F +L   G+ PD ITY  +I      ++ DEAV++F  +      P+
Sbjct: 575 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 634

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K GR D+A  +F ++ E   +    TY+ L+ G  +   +K    + E
Sbjct: 635 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 694

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +N  PN+++Y+ ++D LCK G + +AL   +       +PD+ +Y  +I G  K  
Sbjct: 695 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 754

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  ++  M +  ++PD   L T+
Sbjct: 755 RYNEAFSIFCQM-KKVLIPDYATLCTI 780



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++F ++  +G+ P+  +YN++I G+   +R  +A++LF+ +     KPN  T  + I+
Sbjct: 479 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFIN 538

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G    A   +  M  KG   +VV  + ++ G  KS  +  A  V+ E+    +SP
Sbjct: 539 YYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP 598

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+++I    K    +EA+  F+  ++N+ +PDV+    LI    KAGR  EA +++
Sbjct: 599 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIF 658

Query: 191 DSMLRNGIMP-DGLLLSTLA 209
             +    + P DG   + LA
Sbjct: 659 YQLKEMNLEPTDGTYNTLLA 678



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 107/202 (52%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ +  +  +G+ PD++  N ++ G     RL  A ++F +L  + + P++IT+T++I 
Sbjct: 549 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 608

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K  + D+A  +F  M+E     +V+  + LID  +K+     A+ ++ ++ E N+ P
Sbjct: 609 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 668

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ L+ GL + G ++E ++       ++  P+++TY  ++   CK G   +A+ + 
Sbjct: 669 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 728

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
            SM   G +PD      L+ YN
Sbjct: 729 YSMTTKGCIPD------LSSYN 744



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 7/198 (3%)

Query: 5    ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            E H L    K FG     GL      YN++ICG    N +D A  LF ++  +   P+  
Sbjct: 863  EAHELVKKFKSFGVSLKTGL------YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF 916

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ +L+DA  K  R+++   +  +M  KG ++  VTY+ +I G  KS+ ++ A D+Y  +
Sbjct: 917  TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL 976

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 SP   +Y  L+DGL K G +E+A   F+  L+     +   Y IL+ G+  AG  
Sbjct: 977  MSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT 1036

Query: 184  TEAMQLYDSMLRNGIMPD 201
             +   L+  M+  GI PD
Sbjct: 1037 EKVCHLFQDMVDQGINPD 1054



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 103/200 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      AL+++  +   G+ P + TY+ ++  +     ++  + L  ++    +KPN
Sbjct: 295 LVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPN 354

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TI I    +  R D+A  + +KM  +G K +V+T++ LI     +  +  A DV+ 
Sbjct: 355 VYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFW 414

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +++  P+ V+Y  L+D     G  +  +  ++    +    +VV Y  +I   C+ G
Sbjct: 415 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 474

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++++D M + GI+P+
Sbjct: 475 RVFEALEMFDEMKQKGIVPE 494



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++K+  ++ +++    +   G+  D      +I   C   +  EA +L +K     +   
Sbjct: 820  ILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 879

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +  +  LI     E  +D A  +F++M E G   +  TY+ L+D   KS  ++    V E
Sbjct: 880  TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 939

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM         V+Y+ +I GL K   +E+A+  ++  +     P   TY  L+ G  KAG
Sbjct: 940  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 999

Query: 182  RPTEAMQLYDSMLRNG 197
            R  +A  L++ ML  G
Sbjct: 1000 RIEDAENLFNEMLEYG 1015



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+  L+    K G   +A  ++  M+  G   +V TYS L+  + K +++++   + 
Sbjct: 284 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 343

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCK 179
            EM  + + PN+ SY+I I  L +    +EA Y     ++N    PDV+T+ +LI+  C 
Sbjct: 344 REMEAHGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITHTVLIQVLCD 402

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AGR ++A  ++  M ++   PD +   TL D
Sbjct: 403 AGRISDAKDVFWKMKKSDQKPDRVTYITLLD 433



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
            R+ +  ++F+ +    +K N  TF  +      EG +  A +    M E G   N  TY
Sbjct: 229 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 288

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + L+    KS   + A +VY  M  + + P++ +YS+L+    KR  +E  L+       
Sbjct: 289 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 348

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + + P+V +Y I IR   +A R  EA ++   M   G  PD
Sbjct: 349 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 389



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 4/167 (2%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTI----LIDAFCKEGRMDDATMMFSKMLEKGPK 94
           +L   D   +  E+      KP     T     +++     GR+ D   +F  M  +  K
Sbjct: 188 ALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVK 247

Query: 95  ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           ANV T++ +  G      ++SA      M E  I  N  +Y+ L+  L K G   EAL  
Sbjct: 248 ANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEV 307

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +   + + ++P V TY++L+  + K       + L   M  +G+ P+
Sbjct: 308 YRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPN 354



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 43/252 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL +   +T +G  PD+ +YNT+I G     R +EA  +F ++  V L P+
Sbjct: 715 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 773

Query: 62  SITFTILIDAFCKEGRMDDATMMFSK-MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             T   ++ +F K G M +A  +     L+ G K +  +   L++G  K   ++ + +  
Sbjct: 774 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 833

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA-----------------LY-AFHCAL-DN 161
           E +  + I+ +      LI  LCK+    EA                 LY +  C L D 
Sbjct: 834 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 893

Query: 162 HLL----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           +L+                PD  TY +L+    K+ R  E +++ + M R G        
Sbjct: 894 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE------ 947

Query: 206 STLADYNLQSSG 217
           ST   YN   SG
Sbjct: 948 STYVTYNTIISG 959



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 37/235 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------- 50
           L+KE   + A  +F Q+  + L PD  T  TI+  +  +  + EA+ +            
Sbjct: 750 LVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKT 808

Query: 51  EKLTCVQL-----KPNSITFTI--------------------LIDAFCKEGRMDDATMMF 85
           ++ +C  L     K   I  +I                    LI   CK+ +  +A  + 
Sbjct: 809 DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 868

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            K    G       Y+ LI G      +  A  ++ EM E    P+  +Y++L+D + K 
Sbjct: 869 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 928

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +EE L               VTY  +I G  K+ R  +A+ LY +++  G  P
Sbjct: 929 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 983



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 8/123 (6%)

Query: 91  KGPKANVVTYSC-----LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + P+    T SC     L+ G+ +  +M   FDV   M    +  N+ +++ +  GL   
Sbjct: 207 RKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDV---MQRQIVKANVGTFAAIFGGLGVE 263

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +  A  A     +  ++ +  TY  L+    K+G   EA+++Y  M+ +G++P     
Sbjct: 264 GGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTY 323

Query: 206 STL 208
           S L
Sbjct: 324 SVL 326


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 117/198 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  LK+  ++  +G E   +TYNTII G     RL++A+ L+  L      P   
Sbjct: 802 KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 861

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+D   K GR++DA  +F++MLE G KAN   Y+ L++G+  + N +    ++++M
Sbjct: 862 TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 921

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I+P+I SY+I+ID LCK G + + L  F   L+  L PD++TY +LI G  K+ R 
Sbjct: 922 VDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL 981

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA+ L++ M + GI+P+
Sbjct: 982 EEAVSLFNEMQKKGIVPN 999



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   ++ A  LF ++ + G + +   YN ++ G+      ++   LF+ +    + P+
Sbjct: 870  LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 929

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TI+ID  CK G+++D    F ++LE G + +++TY+ LIDG  KS+ ++ A  ++ 
Sbjct: 930  IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 989

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM +  I PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 990  EMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSG 1049

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
                A   Y  M+  G +P+
Sbjct: 1050 STDSAYAAYGRMIVGGCLPN 1069



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 111/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  L L  ++   G++P++ +Y   I       R DEA ++  K+     KP+ I
Sbjct: 207 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVI 266

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T+LI   C  GR+ DA  +F KM +   K + VTY  L+D +  + + +S  +++  M
Sbjct: 267 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 326

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N+V+Y+ +ID LC+ G + EAL  F       ++P+  +Y  LI G+ KA R 
Sbjct: 327 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 386

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            +A++L+  M  +G  P+G       +Y  +S  S
Sbjct: 387 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 421



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 103/201 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + ++++  +   G   +++ Y  +I   C + R+ EA+++F+++    + P   ++  LI
Sbjct: 318 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 377

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K  R  DA  +F  M   GPK N  T+   I+ Y KS     A   YE M    I 
Sbjct: 378 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 437

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+ + ++ GL K G +  A   FH      + PD +TY ++I+   KA +  EA+++
Sbjct: 438 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 497

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+ N  +PD L +++L D
Sbjct: 498 FYDMIENNCVPDVLAVNSLID 518



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F +L   G+ PD ITY  +I      ++ DEAV++F  +      P+
Sbjct: 450 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 509

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K GR D+A  +F ++ E   +    TY+ L+ G  +   +K    + E
Sbjct: 510 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 569

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +N  PN+++Y+ ++D LCK G + +AL   +       +PD+ +Y  +I G  K  
Sbjct: 570 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 629

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  ++  M +  ++PD   L T+
Sbjct: 630 RYNEAFSIFCQM-KKVLIPDYATLCTI 655



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 107/202 (52%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ +  +  +G+ PD++  N ++ G     RL  A ++F +L  + + P++IT+T++I 
Sbjct: 424 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 483

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K  + D+A  +F  M+E     +V+  + LID  +K+     A+ ++ ++ E N+ P
Sbjct: 484 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 543

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ L+ GL + G ++E ++       ++  P+++TY  ++   CK G   +A+ + 
Sbjct: 544 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 603

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
            SM   G +PD      L+ YN
Sbjct: 604 YSMTTKGCIPD------LSSYN 619



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++F ++  +G+ P+  +YN++I G+   +R  +A++LF+ +     KPN  T  + I+
Sbjct: 354 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFIN 413

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G    A   +  M  KG   +VV  + ++ G  KS  +  A  V+ E+    +SP
Sbjct: 414 YYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP 473

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+++I    K    +EA+  F+  ++N+ +PDV+    LI    KAGR  EA +++
Sbjct: 474 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIF 533

Query: 191 DSMLRNGIMP-DGLLLSTLA 209
             +    + P DG   + LA
Sbjct: 534 YQLKEMNLEPTDGTYNTLLA 553



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 7/198 (3%)

Query: 5   ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           E H L    K FG     GL      YN++ICG    N +D A  LF ++  +   P+  
Sbjct: 738 EAHELVKKFKSFGVSLKTGL------YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF 791

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+DA  K  R+++   +  +M  KG ++  VTY+ +I G  KS+ ++ A D+Y  +
Sbjct: 792 TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL 851

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP   +Y  L+DGL K G +E+A   F+  L+     +   Y IL+ G+  AG  
Sbjct: 852 MSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT 911

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +   L+  M+  GI PD
Sbjct: 912 EKVCHLFQDMVDQGINPD 929



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 6/167 (3%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K CHL      F  + D+G+ PDI +Y  II   C   +L++ +  F +L  + L+P+ I
Sbjct: 913  KVCHL------FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ +LID   K  R+++A  +F++M +KG   N+ TY+ LI    K+     A  +YEE+
Sbjct: 967  TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
                  PN+ +Y+ LI G    G  + A  A+   +    LP+  TY
Sbjct: 1027 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 72/134 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   L+  L  F QL + GLEPD+ITYN +I G     RL+EAV LF ++    + PN
Sbjct: 940  LCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 999

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              T+  LI    K G+  +A  M+ ++L KG K NV TY+ LI GY  S +  SA+  Y 
Sbjct: 1000 LYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYG 1059

Query: 122  EMCENNISPNIVSY 135
             M      PN  +Y
Sbjct: 1060 RMIVGGCLPNSSTY 1073



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 103/200 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      AL+++  +   G+ P + TY+ ++  +     ++  + L  ++    +KPN
Sbjct: 170 LVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPN 229

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TI I    +  R D+A  + +KM  +G K +V+T++ LI     +  +  A DV+ 
Sbjct: 230 VYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFW 289

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +++  P+ V+Y  L+D     G  +  +  ++    +    +VV Y  +I   C+ G
Sbjct: 290 KMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVG 349

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++++D M + GI+P+
Sbjct: 350 RVFEALEMFDEMKQKGIVPE 369



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K+  ++ +++    +   G+  D      +I   C   +  EA +L +K     +   
Sbjct: 695 ILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 754

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  LI     E  +D A  +F++M E G   +  TY+ L+D   KS  ++    V E
Sbjct: 755 TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 814

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K   +E+A+  ++  +     P   TY  L+ G  KAG
Sbjct: 815 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 874

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A  L++ ML  G
Sbjct: 875 RIEDAENLFNEMLEYG 890



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+  L+    K G   +A  ++  M+  G   +V TYS L+  + K +++++   + 
Sbjct: 159 NAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 218

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCK 179
            EM  + + PN+ SY+I I  L +    +EA Y     ++N    PDV+T+ +LI+  C 
Sbjct: 219 REMEAHGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITHTVLIQVLCD 277

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AGR ++A  ++  M ++   PD +   TL D
Sbjct: 278 AGRISDAKDVFWKMKKSDQKPDRVTYITLLD 308



 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 5/179 (2%)

Query: 28  ITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + + T  C Y         R+ +  ++F+ +    +K N  TF  +      EG +  A 
Sbjct: 86  VAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 145

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           +    M E G   N  TY+ L+    KS   + A +VY  M  + + P++ +YS+L+   
Sbjct: 146 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF 205

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            KR  +E  L+       + + P+V +Y I IR   +A R  EA ++   M   G  PD
Sbjct: 206 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 264



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 43/252 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL +   +T +G  PD+ +YNT+I G     R +EA  +F ++  V L P+
Sbjct: 590 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 648

Query: 62  SITFTILIDAFCKEGRMDDATMMFSK-MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             T   ++ +F K G M +A  +     L+ G K +  +   L++G  K   ++ + +  
Sbjct: 649 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 708

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA-----------------LY-AFHCAL-DN 161
           E +  + I+ +      LI  LCK+    EA                 LY +  C L D 
Sbjct: 709 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 768

Query: 162 HLL----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           +L+                PD  TY +L+    K+ R  E +++ + M R G        
Sbjct: 769 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE------ 822

Query: 206 STLADYNLQSSG 217
           ST   YN   SG
Sbjct: 823 STYVTYNTIISG 834



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 37/235 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------- 50
           L+KE   + A  +F Q+  + L PD  T  TI+  +  +  + EA+ +            
Sbjct: 625 LVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKT 683

Query: 51  EKLTCVQL-----KPNSITFTI--------------------LIDAFCKEGRMDDATMMF 85
           ++ +C  L     K   I  +I                    LI   CK+ +  +A  + 
Sbjct: 684 DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 743

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            K    G       Y+ LI G      +  A  ++ EM E    P+  +Y++L+D + K 
Sbjct: 744 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 803

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +EE L               VTY  +I G  K+ R  +A+ LY +++  G  P
Sbjct: 804 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 858



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 8/123 (6%)

Query: 91  KGPKANVVTYSC-----LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + P+    T SC     L+ G+ +  +M   FDV   M    +  N+ +++ +  GL   
Sbjct: 82  RKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDV---MQRQIVKANVGTFAAIFGGLGVE 138

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +  A  A     +  ++ +  TY  L+    K+G   EA+++Y  M+ +G++P     
Sbjct: 139 GGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTY 198

Query: 206 STL 208
           S L
Sbjct: 199 SVL 201


>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           citrodora]
          Length = 380

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +   +T  GL P ++++NT+I GY  L  LDE  +L   +    ++P+  
Sbjct: 146 KEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVY 205

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 206 TYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 265

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++SP++++Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 266 LSQSLSPDLITYNTLIYGLCKKGELKQA----HDLIDEMSMEGLKPDKITYTTLIDGCCK 321

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D ++ + L
Sbjct: 322 EGDMETAFEHQKRMIQENIRLDDVVYTAL 350



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    + PN +TFT 
Sbjct: 185 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTT 244

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K   +K A D+ +EM    
Sbjct: 245 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEG 304

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ME A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 305 LKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 364

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ P+
Sbjct: 365 KMLREMLSVGLKPN 378



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +   +T   L+P+
Sbjct: 109 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPS 168

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  LI+ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 169 VVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 228

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 229 EMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 288

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 289 ELKQAHDLIDEMSMEGLKPDKITYTTLID 317



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 90/145 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+G+ P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 214 LCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 273

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  +G K + +TY+ LIDG  K  +M++AF+  +
Sbjct: 274 LITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQK 333

Query: 122 EMCENNISPNIVSYSILIDGLCKRG 146
            M + NI  + V Y+ LI GLC+ G
Sbjct: 334 RMIQENIRLDDVVYTALISGLCQEG 358



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 71/128 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A++++ Q+  + L PD+ITYNT+I G C    L +A  L ++++   LKP+ I
Sbjct: 251 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKI 310

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG M+ A     +M+++  + + V Y+ LI G  +      A  +  EM
Sbjct: 311 TYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREM 370

Query: 124 CENNISPN 131
               + PN
Sbjct: 371 LSVGLKPN 378



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++  GL+PD ITY T+I G C    ++ A +  +++    ++ +
Sbjct: 284 LCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLD 343

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
            + +T LI   C+EGR  DA  M  +ML  G K N 
Sbjct: 344 DVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNT 379



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E      + T   +++   K +  K  +  Y+E+ 
Sbjct: 67  FSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEIL 126

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A    +      L P VV++  LI GY + G   
Sbjct: 127 ECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLD 186

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +M  +G+ PD    S L
Sbjct: 187 EGFRLKSAMHASGVQPDVYTYSVL 210


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+ D+G+EPD +TYN II GY       E+ ++F K+T   L P+
Sbjct: 277 LCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPD 336

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TF+  + + CK GR  DA  +F  M  KG   ++V+YS L+ GY          +++ 
Sbjct: 337 TVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFH 396

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I  N    +ILI    KRG+M+EA+  F       + P+VVTY+ LI  +C+ G
Sbjct: 397 SMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ +  M+  GI P+  +  +L
Sbjct: 457 RLADAMEKFSQMISIGIEPNTAVYHSL 483



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 35/239 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +   G  P I+T+N++I GYC + ++++A  + + +  V ++P+ +T   L+ 
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK G++DD  ++F +ML K  K   VTY+ ++DG  ++    +A  ++ EM ++  + 
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFH------CALD------------------------ 160
           +I +Y IL+ GLC+  L +EA+  FH      C  D                        
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711

Query: 161 -----NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
                + L+P+V TY ++IR   K G   EA  ++ SM ++G  P   LL+ +    LQ
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 770



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 115/213 (53%), Gaps = 1/213 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ +F ++  +G+ P+++TY+T+I  +C + RL +A++ F ++  + ++PN+ 
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +  LI  FC  G +  A    S+M+ KG  + N+V +S +I        +  A DV+  
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +      P IV+++ LIDG C  G ME+A       +   + PDVVT   L+ GYCK+G+
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
             + + L+  ML   + P  +  + + D  L++
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 98/178 (55%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            PD++++NT+I G+     + +A  LF ++    + P+  T+  ++DA CK   MD A  
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M++KG + + VTY+ +I GY  S + K +  ++ +M    + P+ V++S  +  LC
Sbjct: 289 VLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLC 348

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           K G  ++A   F        +PD+V+Y+IL+ GY   GR  +   L+ SM   GI+ +
Sbjct: 349 KHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSN 406



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 9/206 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSIT 64
           D       +L   GL+   I   T +   C   R DEAV +      +L+CV   P++I+
Sbjct: 141 DLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCV---PDAIS 197

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +  +I + C + R  +A  M  +M ++G +   +VV+++ +I G+FK   +  A +++ E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  + P++ +Y+ ++D LCK   M++A +     +D  + PD VTY  +I GY  +G 
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             E+ +++  M   G++PD +  S+ 
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSF 343



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 2/190 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTILIDA 71
           L  ++++    PD I+YNT+I   C  +R  EA+ + +++     +  P+ ++F  +I  
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           F K+G +  A  +F++M++KG   +V TY+ ++D   K++ M  A  V  +M +  + P+
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            V+Y+ +I G    G  +E+   F       L+PD VT++  +   CK GR  +A +++ 
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361

Query: 192 SMLRNGIMPD 201
            M   G MPD
Sbjct: 362 YMTTKGHMPD 371



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 1/184 (0%)

Query: 11  ALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +   ++  +GL  P+I+ +++II   C   R+ +A  +F  +  +  +P  +TF  LI
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLI 555

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +C  G+M+ A  +   M+  G + +VVT + L+ GY KS  +     ++ EM    + 
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P  V+Y+I++DGL + G    A   FH  +D+    D+ TY IL++G C+     EA+ L
Sbjct: 616 PTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 675

Query: 190 YDSM 193
           +  +
Sbjct: 676 FHKL 679



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 2/189 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++     AA K+F ++ D G   DI TY  ++ G C  +  DEA+ LF KL  +  K +
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 687

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I+A  K  R ++A  +F+ +   G   NV TY  +I    K  +++ A  ++ 
Sbjct: 688 ITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFS 747

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKA 180
            M ++  +P+    + +I  L ++G + +A Y +   +D  ++  +  T ++L+  +   
Sbjct: 748 SMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY-YMSKVDGTIISLEASTTSLLMSLFSSK 806

Query: 181 GRPTEAMQL 189
           G+  E ++ 
Sbjct: 807 GKHREQIKF 815



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 3/141 (2%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY-EE 122
           T+ IL+D  C+  R D      +++L  G K   +  +  +     ++    A DV    
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKA 180
           M E +  P+ +SY+ +I  LC     +EAL              PDVV++  +I G+ K 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G  ++A  L++ M++ G++PD
Sbjct: 246 GEVSKACNLFNEMVQKGVVPD 266


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D AL+L   +  +G E D  T N I  G+C  NR +EA +L   +    + PN +
Sbjct: 375 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 434

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +F+ILID +CKE    +A  +F  M +KG   +VVTY+  I+ Y K   M+ A+ +  EM
Sbjct: 435 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 494

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+ LIDG    G ++ AL  F+      L  +VVTY ++I G  K GR 
Sbjct: 495 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRA 554

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +LYD M + GI+PD  + S+L
Sbjct: 555 DEAFKLYDEMNKEGIVPDDGIYSSL 579



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   ++ A KLF ++  +G+EPD+  Y +II   C    +  A  LF+++T  +L PN+ 
Sbjct: 270 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 329

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS---------QNM- 113
           T+  LI+  CK G M  A MM + M  KG   N V ++ L+DGY K          QN+ 
Sbjct: 330 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 389

Query: 114 -KSAFDV-----------------YEE-------MCENNISPNIVSYSILIDGLCKRGLM 148
            +  F++                  EE       M E  ++PN+VS+SILID  CK    
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 449

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F         P VVTY   I  YCK G+  EA +L + M   G+MPD    ++L
Sbjct: 450 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 509

Query: 209 ADYNLQSSGSQEHCI 223
            D   ++SG+ +  +
Sbjct: 510 ID-GERASGNVDRAL 523



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 119/222 (53%), Gaps = 6/222 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---LDEAVQLFEKLTCVQL 58
           L K+  +  A  L  +L  +G +P +ITYNT++ GY  +     ++E + L EK     +
Sbjct: 198 LCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV---V 254

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             N  T+T+LI+ + +  ++++A  +F +ML+KG + +V  Y+ +I+   K  NMK AF 
Sbjct: 255 DYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFV 314

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +++EM E  + PN  +Y  LI+G CK G M+ A    +      +  + V +  L+ GYC
Sbjct: 315 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 374

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           K G   EA++L + M + G   D    + +A    +S+  +E
Sbjct: 375 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREE 416



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  +++  ++   Q+ D G+E  + ++  ++ G C    +  A  L ++L C   KP+
Sbjct: 163 LKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPS 222

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L++ + +   +     + S M +     NV TY+ LI+ Y +S  ++ A  +++
Sbjct: 223 VITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 282

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I P++  Y+ +I+  CK G M+ A   F    +  L+P+  TY  LI G CKAG
Sbjct: 283 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 342

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  + + M   G+  + ++ +TL D
Sbjct: 343 EMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 98/173 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +L   + +RG+ P++++++ +I  YC      EA +LF+ +      P+ +T+   
Sbjct: 415 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 474

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ +CK+G+M++A  + ++M E+G   +  TY+ LIDG   S N+  A +++ EM +  +
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           + N+V+Y+++I GL K G  +EA   +       ++PD   Y+ LI    K G
Sbjct: 535 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 77/143 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A +LF  +  +G  P ++TYN  I  YC   +++EA +L  ++    L P++ 
Sbjct: 445 KEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTY 504

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID     G +D A  +F++M + G   NVVTY+ +I G  K      AF +Y+EM
Sbjct: 505 TYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEM 564

Query: 124 CENNISPNIVSYSILIDGLCKRG 146
            +  I P+   YS LI  L K G
Sbjct: 565 NKEGIVPDDGIYSSLIASLHKVG 587



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 76/145 (52%), Gaps = 6/145 (4%)

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + G M+       +M++ G +  V +++ ++DG  K   +  A  + +E+      P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 131 NIVSYSILIDGLCK---RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++++Y+ L++G  +    G + E L      + ++   +V TY +LI  Y ++ +  EA 
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDY---NVTTYTMLIEWYSRSSKIEEAE 278

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYN 212
           +L+D ML+ GI PD  + +++ ++N
Sbjct: 279 KLFDEMLKKGIEPDVYIYTSIINWN 303


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 108/197 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A ++   L + GL P  + YNTI+ GYC +  +D A+   E++    L+PN
Sbjct: 252 LCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPN 311

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I F  +ID FC+   +D A     KM+ KG   +V TY+ LIDGY +       F + E
Sbjct: 312 CIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILE 371

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM EN   PN++SY  LI+ LCK G + EA       +   +LP+   Y +LI G C  G
Sbjct: 372 EMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVG 431

Query: 182 RPTEAMQLYDSMLRNGI 198
           +  EA++ +D M +NGI
Sbjct: 432 KLREALRFFDEMSKNGI 448



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 105/193 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +   ++  +G+ P + TYN +I GY  L       Q+ E++     KPN I++  
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGS 387

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  CK+G++ +A M+   M+ +G   N   Y+ LIDG      ++ A   ++EM +N 
Sbjct: 388 LINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNG 447

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I   IV+Y+ LI GLCK G ++EA   F         PDV+TY  LI GY  AG   + +
Sbjct: 448 IGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCL 507

Query: 188 QLYDSMLRNGIMP 200
           +LY++M + G+ P
Sbjct: 508 ELYETMKKLGLKP 520



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++    D  L LF ++   G  PD + Y   +     L  L  A++LFE +   ++ PN
Sbjct: 41  LVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPN 100

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + +LI   CKE R+ DA  +F +M  +    N VT++ LIDGY K+  +  A  + E
Sbjct: 101 VFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRE 160

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P+I++++ L+ GLCK   +EEA    +    N  +PD  TY+I+  G  K+ 
Sbjct: 161 RMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSD 220

Query: 182 RPT-EAMQLYDSMLRNGIMPDGLLLSTL 208
                A+ LY   +  G+  D    S L
Sbjct: 221 DGAGAALDLYREAIGKGVKIDNYTCSIL 248



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 3/208 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +   +  RG+ P+   YN +I G C++ +L EA++ F++++   +   
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK G++ +A  MF  +   G   +V+TY+ LI GY  + N +   ++YE
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYE 511

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL-MEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M +  + P I ++  LI G  K G+ ++E L  F+  L  +L PD V Y  +I  Y + 
Sbjct: 512 TMKKLGLKPTINTFHPLISGCSKEGIKLKETL--FNEMLQMNLSPDRVVYNAMIHCYQET 569

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   +A  L   M+  G+ PD    ++L
Sbjct: 570 GHVQKAFSLQKEMVDMGVRPDNKTYNSL 597



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F  +T  G  PD+ITYN++I GY +     + ++L+E +  + LKP 
Sbjct: 462 LCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  LI    KEG     T+ F++ML+     + V Y+ +I  Y ++ +++ AF + +
Sbjct: 522 INTFHPLISGCSKEGIKLKETL-FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQK 580

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + P+  +Y+ LI G  K G + E            L+P+  TY++LI+G+C   
Sbjct: 581 EMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLK 640

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A   Y  ML NG +P+
Sbjct: 641 DFNGAYVWYREMLENGFLPN 660



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  AL+ F +++  G+   I+TYN++I G C + +L EA ++F  +T     P+ IT+ 
Sbjct: 432 KLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYN 491

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +   G       ++  M + G K  + T+  LI G  K + +K    ++ EM + 
Sbjct: 492 SLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQM 550

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+SP+ V Y+ +I    + G +++A       +D  + PD  TY  LI G+ K G+ +E 
Sbjct: 551 NLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSET 610

Query: 187 MQLYDSMLRNGIMPD 201
             L D M   G++P+
Sbjct: 611 KDLVDDMKAKGLIPE 625



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 105/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL L+ +   +G++ D  T + ++ G C   ++++A ++ + L    L P  + +  ++
Sbjct: 225 AALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIV 284

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + +C+ G MD A +   +M  +G + N + ++ +ID + + Q +  A +  ++M    I+
Sbjct: 285 NGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA 344

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++ +Y+ILIDG  +  +            +N   P+V++Y  LI   CK G+  EA  +
Sbjct: 345 PSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMV 404

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              M+  G++P+  + + L D
Sbjct: 405 LRDMVGRGVLPNANIYNMLID 425



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 97/203 (47%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L+  +   G  P       I+       + D  + LF+++  +  +P+ + +   + A 
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G +  A  +F  M  +    NV  Y+ LI G  K + ++ A  ++ EM   N+ PN 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+++ LIDG CK G ++ A+          + P ++T+  L+ G CKA R  EA  + + 
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 193 MLRNGIMPDGLLLSTLADYNLQS 215
           +  NG +PDG   S + D  L+S
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKS 219



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 100/203 (49%), Gaps = 1/203 (0%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C      ++  ++ + G +P++I+Y ++I   C   ++ EA  +   +    + PN+  +
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +LID  C  G++ +A   F +M + G  A +VTY+ LI G  K   +K A +++  +  
Sbjct: 421 NMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITS 480

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P++++Y+ LI G    G  ++ L  +       L P + T+  LI G  K G   +
Sbjct: 481 TGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK 540

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
              L++ ML+  + PD ++ + +
Sbjct: 541 E-TLFNEMLQMNLSPDRVVYNAM 562



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 1/172 (0%)

Query: 38  CSLNRLDEAV-QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           CS +++   V +L++ +      P+     +++++  +  + D+   +F +M+  G + +
Sbjct: 6   CSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPD 65

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            + Y   +    K  ++K A +++E M    + PN+  Y++LI GLCK   + +A   F 
Sbjct: 66  KLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFG 125

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                +L+P+ VT+  LI GYCKAG    A+ L + M +  + P  +  ++L
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSL 177



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++    L PD + YN +I  Y     + +A  L +++  + ++P++ T+  LI    
Sbjct: 543 LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL 602

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           KEG++ +   +   M  KG      TYS LI G+   ++   A+  Y EM EN   PN+ 
Sbjct: 603 KEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662

Query: 134 SYSILIDGLCKRGLMEEA 151
             + L  GL K G ++EA
Sbjct: 663 ICNELSTGLRKDGRLQEA 680



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A  L  ++ D G+ PD  TYN++I G+    +L E   L + +    L P + T++
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS 630

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI   C     + A + + +MLE G   NV   + L  G  K   ++ A  +  EM  N
Sbjct: 631 LLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIAN 690

Query: 127 NI 128
            +
Sbjct: 691 GM 692



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  L     L   +  +GL P+  TY+ +I G+C L   + A   + ++      PN 
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
                L     K+GR+ +A  + S+M+  G
Sbjct: 662 CICNELSTGLRKDGRLQEAQSICSEMIANG 691


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 109/187 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L+ Q+  + + PD++T++ +I G+C + +L+EA  LF ++    + P+  TF IL+D
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG +  A  M   M+++G   NVVTYS L+DGY     +  A  V   + +   +P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  SY  +I+G CK  +++EAL  F+      + PD VTY  LI G CK+GR + A +L 
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406

Query: 191 DSMLRNG 197
           D M  NG
Sbjct: 407 DEMHDNG 413



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 109/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +   ++  G  P+  +Y T+I G+C +  +DEA+ LF  +    + P+ +T+ 
Sbjct: 328 QVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYN 387

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK GR+  A  +  +M + G  AN+ TY+CLID   K+ ++  A  + +++ + 
Sbjct: 388 SLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQ 447

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++ +++ILI GLCK G ++ A   F   L      +  TY I++ G CK G   EA
Sbjct: 448 GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEA 507

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L   M  NGI+PD +   TL
Sbjct: 508 EALLSKMDDNGIIPDAVTYETL 529



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE +L  A  +   +   G+ P+++TY++++ GYC +N++++A  +   ++ +   PN
Sbjct: 288 LCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPN 347

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  +I+ FCK   +D+A  +F+ M  KG   + VTY+ LIDG  KS  +  A+++ +
Sbjct: 348 AHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVD 407

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N    NI +Y+ LID LCK   +++A+       D  + PD+ T+ ILI G CK G
Sbjct: 408 EMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG 467

Query: 182 RPTEAMQLYDSMLRNG---------IMPDGLLLSTLAD 210
           R   A  ++  +L  G         IM +GL    L D
Sbjct: 468 RLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 3/208 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH+   + A  +  ++   G EPD IT+NT+I G C   ++ EA+   + +  +    + 
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQ 173

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            ++  LI+  CK G    A  M  K+  K  K NVV Y+ +ID   K + +  A+++Y +
Sbjct: 174 FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQ 233

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP++V++S LI G C  G +EEA   F   +  ++ PD  T+ IL+   CK G 
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN 293

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  +   M++ G+MP+ +  S+L D
Sbjct: 294 LKGAKNMLVVMMKEGVMPNVVTYSSLMD 321



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 105/192 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF  +  +G+ PD +TYN++I G C   R+  A +L +++       N  T+  
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CK   +D A  +  K+ ++G + ++ T++ LI G  K   +K+A DV++++    
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            S N  +Y+I+++GLCK GL +EA        DN ++PD VTY  LI+         +A 
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543

Query: 188 QLYDSMLRNGIM 199
           +L   M+   ++
Sbjct: 544 KLLREMIARDVV 555



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL     +   G   D  +Y T+I G C +     A+Q+  K+    +K N + +  +ID
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK   + DA  ++S+M+ K    +VVT+S LI G+     ++ AF ++ EM   NI+P
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP 276

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +++IL+D LCK G ++ A       +   ++P+VVTY+ L+ GYC   +  +A  + 
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVL 336

Query: 191 DSMLRNGIMPDG 202
           +++ + G  P+ 
Sbjct: 337 NTISQMGAAPNA 348



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 103/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   A+ L  +L   G+ PDI T+N +I  YC +  ++ A  +  K+  +  +P++ITF 
Sbjct: 83  HYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C  G++ +A      +L  G   +  +Y  LI+G  K    ++A  +  ++   
Sbjct: 143 TLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGK 202

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N+V Y+ +ID LCK  L+ +A   +   +   + PDVVT++ LI G+C  G+  EA
Sbjct: 203 LVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEA 262

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L+  M+   I PD    + L D
Sbjct: 263 FGLFREMVLKNINPDYYTFNILVD 286



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 110/201 (54%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            AL++  ++  + ++ +++ YNTII   C    + +A +L+ ++   ++ P+ +TF+ LI
Sbjct: 191 TALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALI 250

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G++++A  +F +M+ K    +  T++ L+D   K  N+K A ++   M +  + 
Sbjct: 251 YGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVM 310

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+YS L+DG C    + +A +  +        P+  +Y  +I G+CK     EA+ L
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           ++ M   GI PD +  ++L D
Sbjct: 371 FNDMQFKGIAPDKVTYNSLID 391



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A+ L  ++ D+G++PD+ T+N +I G C + RL  A  +F+ L       N
Sbjct: 428 LCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVN 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+ I+++  CKEG  D+A  + SKM + G   + VTY  LI   F     + A  +  
Sbjct: 488 AWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLR 547

Query: 122 EMCENNI 128
           EM   ++
Sbjct: 548 EMIARDV 554



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L  ++ D G   +I TYN +I   C  + +D+A+ L +K+    ++P+
Sbjct: 393 LCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPD 452

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI   CK GR+ +A  +F  +L KG   N  TY+ +++G  K      A  +  
Sbjct: 453 MYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLS 512

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M +N I P+ V+Y  LI  L  +   E+A
Sbjct: 513 KMDDNGIIPDAVTYETLIQALFHKDENEKA 542



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 4/204 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN--RLDEAVQLFEKLTCVQLKPNSITF 65
           +D  +  F  L        II +N I+      N      A+ L  +L    + P+  TF
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            ILI+ +C    M+ A  M +K+L+ G + + +T++ LI G   +  +K A   ++ +  
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKAGRPT 184
                +  SY  LI+GLCK G    AL      +D  L+  +VV Y  +I   CK     
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLR-KIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +A +LY  M+   I PD +  S L
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSAL 249


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 116/207 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  ALK F  +    L P+++T+  +I GYC    L+ AV L++++  V++  N +
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID FCK+G M  A  M+S+M+E   + N + Y+ +IDG+F+  +  +A     +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  +I +Y ++I GLC  G ++EA         + L+PD+V +  ++  Y K+GR 
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+ +Y  ++  G  PD + LST+ D
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMID 381



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 108/191 (56%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++TY+T I  +C    L  A++ F  +    L PN +TFT LID +CK G ++ A  +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + +M       NVVTY+ LIDG+ K   M+ A ++Y  M E+ + PN + Y+ +IDG  +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           RG  + A+      L+  +  D+  Y ++I G C  G+  EA ++ + M ++ ++PD ++
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340

Query: 205 LSTLADYNLQS 215
            +T+ +   +S
Sbjct: 341 FTTMMNAYFKS 351



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 5/197 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K   + AA+ ++ +L +RG EPD++  +T+I G     +L EA+  F    C++ K N 
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIE-KAND 403

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T+LIDA CKEG   +   +FSK+ E G   +   Y+  I G  K  N+  AF +   
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  +  ++++Y+ LI GL  +GLM EA   F   L++ + PD   + +LIR Y K G 
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523

Query: 183 PTEAMQLYDSMLRNGIM 199
              A  L   M R G++
Sbjct: 524 MAAASDLLLDMQRRGLV 540



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 4/200 (2%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITFTILIDAFCKEGRM 78
           G EPD+I+YN++I G+C    +  A  + E L        KP+ ++F  L + F K   +
Sbjct: 86  GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           D+  +    ML K    NVVTYS  ID + KS  ++ A   +  M  + +SPN+V+++ L
Sbjct: 146 DEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           IDG CK G +E A+  +       +  +VVTY  LI G+CK G    A ++Y  M+ + +
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264

Query: 199 MPDGLLLSTLADYNLQSSGS 218
            P+ L+ +T+ D   Q   S
Sbjct: 265 EPNSLVYTTIIDGFFQRGDS 284



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 30/230 (13%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+K   ++ ++G+  DI  Y  II G C   +L EA ++ E +    L P+ + FT +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF----------- 117
           ++A+ K GRM  A  M+ K++E+G + +VV  S +IDG  K+  +  A            
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV 404

Query: 118 -------------------DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
                               ++ ++ E  + P+   Y+  I GLCK+G + +A       
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   LL D++ Y  LI G    G   EA Q++D ML +GI PD  +   L
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 40/239 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+ L+ ++    +  +++TY  +I G+C    +  A +++ ++   +++PNS+
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG----------------- 106
            +T +ID F + G  D+A    +KML +G + ++  Y  +I G                 
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329

Query: 107 ------------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                             YFKS  MK+A ++Y ++ E    P++V+ S +IDG+ K G +
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
            EA+  F     N      V Y +LI   CK G   E  +L+  +   G++PD  + ++
Sbjct: 390 HEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 4/188 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +LK    L  RG  P   ++N+++   C L ++  A  +   +     +P+ I++  LID
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99

Query: 71  AFCKEGRMDDATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
             C+ G +  A+++   +        K ++V+++ L +G+ K + +   F VY  +    
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKC 158

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+V+YS  ID  CK G ++ AL +FH    + L P+VVT+  LI GYCKAG    A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 188 QLYDSMLR 195
            LY  M R
Sbjct: 219 SLYKEMRR 226



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE       +LF ++++ GL PD   Y + I G C    L +A +L  ++    L  +
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI     +G M +A  +F +ML  G   +   +  LI  Y K  NM +A D+  
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532

Query: 122 EM 123
           +M
Sbjct: 533 DM 534



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +L  A KL  ++   GL  D++ Y T+I G  S   + EA Q+F+++    + P+
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           S  F +LI A+ KEG M  A+ +   M  +G    V    C
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A++L G ++  GL PD++TYNT+ICG C  +R+ EA +   K+     +PN
Sbjct: 340 LCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPN 399

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +ID +CK+G + DA  +    + KG K +  TY  L++G+ +  +   A  V++
Sbjct: 400 DFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFK 459

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +     + P+I+ Y+ LI GLC++GL+  AL   +   +    PD+ TY ++I G CK G
Sbjct: 460 DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMG 519

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             ++A  L    +  G +PD    +TL D
Sbjct: 520 CLSDANHLIGDAITKGCIPDIFTYNTLVD 548



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ +F     +GL P II YNT+I G C    +  A+QL  ++     KP+  T+ ++
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  CK G + DA  +    + KG   ++ TY+ L+DGY +   + SA ++   M    +
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P++++Y+ L++GLCK    EE +  F    +    P+++TY  +I   C + +  EA+ 
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L   M   G+ PD +   TL
Sbjct: 632 LLGEMKSKGLTPDVVSFGTL 651



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 113/204 (55%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G EP+  TYN+II GYC    + +A ++ +       KP+  T+  L++ FC++G
Sbjct: 390 KMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDG 449

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
             D A  +F   L KG + +++ Y+ LI G  +   +  A  +  EM E    P+I +Y+
Sbjct: 450 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ++I+GLCK G + +A +    A+    +PD+ TY  L+ GYC+  +   A++L + M   
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569

Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
           G+ PD +  +TL +   +++ S+E
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEE 593



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  L G    +G  PDI TYNT++ GYC   +LD A++L  ++    + P+ IT+  
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CK  + ++   +F  M EKG   N++TY+ +I+    S+ +  A D+  EM    
Sbjct: 581 LLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV-TYAILIRGYCKAGRPTEA 186
           ++P++VS+  LI G CK G ++ A   F      + +     TY I+I  + +      A
Sbjct: 641 LTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMA 700

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L+  M +NG  PD      L D
Sbjct: 701 LRLFSEMKKNGCDPDNYTYRVLID 724



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +LF ++ +  L PD+ T+N ++   C    + E+ +LF+K+    + PN  TF I 
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CKEG +D A  +   +  +G + +VVTY+ +I G  +   +  A +   +M     
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN  +Y+ +IDG CK+G++ +A      A+     PD  TY  L+ G+C+ G P +AM 
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++   L  G+ P  ++ +TL
Sbjct: 457 VFKDGLGKGLRPSIIVYNTL 476



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    +  +++F  +T++G  P+IITYNTII   C+  +++EAV L  ++    L P+
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV-TYSCLIDGYFKSQNMKSAFDVY 120
            ++F  LI  FCK G +D A  +F  M ++   ++   TY+ +I  + +  NMK A  ++
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +N   P+  +Y +LIDG CK G + +        ++   +P + T+  ++   C  
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVE 764

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  EA+ +   M++  I+PD
Sbjct: 765 HKVQEAVGIIHLMVQKDIVPD 785



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 109/198 (55%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  LD+A++L  ++  +G+ PD+ITYNT++ G C   + +E +++F+ +T     PN I
Sbjct: 552 RQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNII 611

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I++ C   ++++A  +  +M  KG   +VV++  LI G+ K  ++  A+ ++  M
Sbjct: 612 TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 671

Query: 124 CEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            +  ++S    +Y+I+I    ++  M+ AL  F     N   PD  TY +LI G+CK G 
Sbjct: 672 EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGN 731

Query: 183 PTEAMQLYDSMLRNGIMP 200
             +  +     +  G +P
Sbjct: 732 VNQGYKFLLENIEKGFIP 749



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 6/205 (2%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +LF ++  RG+ P++ T+N  I G C    LD AV+L   ++   L+P+ +T+  +I   
Sbjct: 316 RLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C++ R+ +A     KM+  G + N  TY+ +IDGY K   +  A  + ++       P+ 
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  L++G C+ G  ++A+  F   L   L P ++ Y  LI+G C+ G    A+QL + 
Sbjct: 436 FTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNE 495

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSG 217
           M   G  PD      +  YNL  +G
Sbjct: 496 MAEKGCKPD------IWTYNLIING 514



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 102/190 (53%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G +PD  TY +++ G+C     D+A+ +F+      L+P+ I +  LI   C++G +  
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  + ++M EKG K ++ TY+ +I+G  K   +  A  +  +       P+I +Y+ L+D
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C++  ++ A+   +      + PDV+TY  L+ G CK  +  E M+++ +M   G  P
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608

Query: 201 DGLLLSTLAD 210
           + +  +T+ +
Sbjct: 609 NIITYNTIIE 618



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 107/210 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++  + + A K++ ++ D+ +E D+ TY   I  +C   R   A++L   +  +    
Sbjct: 199 ILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFS 258

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++ +  ++  F + G  D A  +F +MLE     +V T++ L+    K   +  +  ++
Sbjct: 259 NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLF 318

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +++ +  + PN+ +++I I GLCK G ++ A+    C     L PDVVTY  +I G C+ 
Sbjct: 319 DKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRK 378

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  EA +    M+  G  P+    +++ D
Sbjct: 379 SRVVEAEECLHKMVNGGFEPNDFTYNSIID 408



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 102/201 (50%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L   +   G   + + Y T++ G+      D A +LF+++    L P+  TF  L+
Sbjct: 243 AALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLV 302

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A CK+G + ++  +F K+L++G   N+ T++  I G  K  ++  A  +   +    + 
Sbjct: 303 HALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLR 362

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+Y+ +I GLC++  + EA    H  ++    P+  TY  +I GYCK G   +A ++
Sbjct: 363 PDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRI 422

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
               +  G  PD     +L +
Sbjct: 423 LKDAVFKGFKPDEFTYCSLVN 443



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+  F ++     +P + +YN I+         ++A +++ ++   +++ +  
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TI I +FC+ GR   A  +   M   G  +N V Y  ++ G+++  +   A ++++EM
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P++ +++ L+  LCK+G + E+   F   L   + P++ T+ I I+G CK G  
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A++L   + R G+ PD +  +T+
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTV 371



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 1/163 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKPNSITFT 66
           ++ A+ L G++  +GL PD++++ T+I G+C +  LD A  LF  +     +   + T+ 
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 685

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I AF ++  M  A  +FS+M + G   +  TY  LIDG+ K+ N+   +    E  E 
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
              P++ ++  +++ LC    ++EA+   H  +   ++PD V 
Sbjct: 746 GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 80/165 (48%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           Y    ++ EAV  FE++      P+  ++  +++   + G  + A  ++ +M +K  +++
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           V TY+  I  + ++    +A  +   M       N V+Y  ++ G  + G  + A   F 
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L+  L PDV T+  L+   CK G   E+ +L+D +L+ G+ P+
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPN 329


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 1/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITYNT+I G C   ++DEA +L   +  V +KP+ +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +C+  RMDDA  +F +M+  G   N++TY+ ++ G F ++   +A ++Y  +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            EA  L+ +   NG++PD    S +A+ NL   GS E 
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAE-NLIEQGSLEE 709



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 114/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGLEPDI TY T++ GY +   L E   L + +    ++P+   F ILI 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++D A ++FSKM + G   NVV Y  +ID   KS ++  A   +E+M +  ++P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI+ Y+ LI GLC     ++A       LD  +  + + +  +I  +CK GR  E+ +L+
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+R G+ PD +  +TL D
Sbjct: 505 DLMVRIGVKPDIITYNTLID 524



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 114/197 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A+  F Q+ D GL P+II Y ++I G C+ ++ D+A +L  ++    +  
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +ID+ CKEGR+ ++  +F  M+  G K +++TY+ LIDG   +  M  A  + 
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+IV+Y  LI+G C+   M++AL  F   + + + P+++TY I+++G    
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY S+ ++G
Sbjct: 600 RRTAAAKELYVSITKSG 616



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++   GL P+++ Y T+I   C    +D+A+  FE++    L PN I
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI   C   + D A  +  +ML++G   N + ++ +ID + K   +  +  +++ M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++Y+ LIDG C  G M+EA       +   + PD+VTY  LI GYC+  R 
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M+ +G+ P+
Sbjct: 568 DDALALFKEMVSSGVSPN 585



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 111/196 (56%), Gaps = 3/196 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITF 65
           DA   +  ++T+ G  PD+ +YN ++ G C  NR  EA++L   +   +     P+ +++
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++ F KEG  D A   + +ML++G   +VVTYS +I    K+Q M  A +V   M +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N + P+ ++Y+ ++ G C  G  +EA+        + + P+VVTY+ L+   CK GR TE
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 186 AMQLYDSMLRNGIMPD 201
           A +++DSM + G+ PD
Sbjct: 325 ARKIFDSMTKRGLEPD 340



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 115/218 (52%), Gaps = 4/218 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   D IT+  ++ G C+  R  +A+ +   ++T +   P+  ++
Sbjct: 107 RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSY 166

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             L+   C E R  +A  +   M +    G   +VV+Y+ +++G+FK  +   A+  Y E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I P++V+YS +I  LCK   M++A+   +  + N ++PD +TY  ++ GYC +G+
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           P EA+     M  +G+ P+ +  S+L +Y  ++  S E
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 3/194 (1%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   + D    G  PD+++YNT++ G+      D+A   + ++    + P+ +T++ 
Sbjct: 182 ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 241

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A CK   MD A  + + M++ G   + +TY+ ++ GY  S   K A    ++M  + 
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V+YS L++ LCK G   EA   F       L PD+ TY  L++GY   G   E  
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 188 QLYDSMLRNGIMPD 201
            L D M+RNGI PD
Sbjct: 362 ALLDLMVRNGIQPD 375



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 4/209 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PDI+TY T+I GYC ++R+D+A+ LF+++    + PN IT+ I
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++       R   A  ++  + + G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +     +++I+I  L K G M+EA  L+A H A  N L+PDV TY+++     + G   E
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA--NGLVPDVRTYSLMAENLIEQGSLEE 709

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
              L+ SM  NG   D  +L+++    LQ
Sbjct: 710 LDDLFLSMEENGCSADSRMLNSIVRKLLQ 738



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 43/233 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV---QLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P   T+ I
Sbjct: 39  ARHVFDELLRRGRGASIYGLNRALAD-VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAI 97

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LI   C+ GR+D        +++KG + + +T++ L+ G    +    A D+        
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 121 -------------EEMCENNIS-------------------PNIVSYSILIDGLCKRGLM 148
                        + +C+ N S                   P++VSY+ +++G  K G  
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++A   +H  LD  +LPDVVTY+ +I   CKA    +AM++ ++M++NG+MPD
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 270



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T  G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GRMD+A  +F+     G   +V TYS + +   +  +++   D++  M EN  S
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            +    + ++  L +RG +  A
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRA 745


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 110/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +G  PD+I YN ++ G C L  L+EA +L +K+    + P+ +T+T +I 
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + GR+     +F +ML KG   +VVTY+ LI G+     ++ AF  + EM E  I P
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LI+GLCK   M++A   F   ++  + P+  +Y ILI   C  G   EA+ LY
Sbjct: 618 NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLY 677

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  G+ PD    S L
Sbjct: 678 KQMLDRGVQPDSCTHSAL 695



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A++++  + + G++P I+TYNT++  YC   ++ + + L  ++      PN +T+ +
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+   K+G  + A  +  +ML+ G K +  TY+ LI GYF    +  A  + EEM    
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP + +Y+  I GLCK G M +A+      L N+LLPDVV+Y  LI GYC+ G   +A 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+D +    + P  +  +TL D
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLD 417



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 109/206 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   + A  L G++   GL+    TYN +I GY +   L EA+ L E++      P 
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPT 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I   CK GRM DA    S ML      +VV+Y+ LI GY +  N+  AF +++
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P IV+Y+ L+DGLC++G +E A       ++  + PD+VTY IL+ G CK G
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLST 207
             + A + +D ML  G+  D    +T
Sbjct: 459 SLSMAQEFFDEMLHEGLELDSYAYAT 484



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 107/213 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A + F ++   GLE D   Y T I G   L     A  L E++      P+ I + +
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D  CK G +++A+ +  KM+  G   + VTY+ +I  + ++  ++   +++ EM    
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P++V+Y++LI G   +G +E A   F    +  +LP+V+TY  LI G CK  R  +A 
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAY 639

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +  M+  GI P+    + L + N      QE
Sbjct: 640 NFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  A  LF +L    L P I+TYNT++ G C    L+ A QL  ++    + P+ +T+T
Sbjct: 389 NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYT 448

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL++  CK G +  A   F +ML +G + +   Y+  I G  K  +   AF + EEM   
Sbjct: 449 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+++ Y++++DGLCK G +EEA       + + ++PD VTY  +I  + + GR  + 
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +++  ML  G+ P  +  + L
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVL 590



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 102/178 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A +L  ++   G+ PD +TY +II  +    RL +  ++F ++    L P+
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPS 583

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LI     +GR++ A + FS+M EKG   NV+TY+ LI+G  K + M  A++ + 
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           EM E  I PN  SY+ILI+  C  G  +EAL  +   LD  + PD  T++ L++   K
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 56/108 (51%)

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LI  Y K   ++    V+++M ++ +SP++ + + ++  L  + LM +A+  +    +  
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + P +VTY  L+  YCK G+  + + L   M R G  P+ +  + L +
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/74 (24%), Positives = 40/74 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A   F ++ ++G+ P+  +Y  +I   C++    EA+ L++++    ++P+
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688

Query: 62  SITFTILIDAFCKE 75
           S T + L+    K+
Sbjct: 689 SCTHSALLKQLGKD 702


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 123/214 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++  ++++RG+ PD++TYN++I G C   R++EA QL E +   +++PN
Sbjct: 183 LCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPN 242

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  +CK G    A  +  +M++ G   +VVT++ LI G+ +   +  A +V  
Sbjct: 243 LVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH 302

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +   +PN+V+Y++LI GLC  G   EA           +LPD++TY  LI  +C+  
Sbjct: 303 LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNF 362

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           +  +A Q+ + M+  G++PDG+   TLA   L+S
Sbjct: 363 QIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 106/184 (57%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + +N ++ G C  N+L EA Q+ E+++   + P+ +T+  LID  CK  RM++A  +
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M+++  + N+VTY+ LI GY K+     A  + E M ++   P++V+++ LI G C+
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +  +++A    H        P++VTY +LI G C AGR  EA +L   M   GI+PD + 
Sbjct: 291 KSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIIT 350

Query: 205 LSTL 208
            ++L
Sbjct: 351 YNSL 354



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +L  ++ +RG  PD++T+++I+   C+   L  A+Q F +   V+  P+S+ F I
Sbjct: 121 MERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNI 178

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CK  ++ +A  M  +M E+G   +VVTY+ LIDG  KS  M+ A  + E M +  
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V+Y+ LI G CK G    A       + +   PDVVT+  LI G+C+  +  +A 
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           ++        +M  GL    L  YN+  SG
Sbjct: 299 EVLH------LMKKGLCAPNLVTYNVLISG 322



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L GQ  D     + ITYNT+I G+C    ++ A QL  ++      P+ +T + ++ A 
Sbjct: 95  ELLGQHCD----TNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQAL 150

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C  G +  A   F + +E  P +  V ++ L+ G  K+  +  A  + EEM E  I P++
Sbjct: 151 CNTGNLSRAMQYFRESVECAPDS--VLFNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y+ LIDGLCK   MEEA       +   + P++VTY  LI GYCK G    A QL + 
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           M+++G  PD +  ++L     Q S   + C
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L   +  R + P+++TYNT+I GYC       A QL E++      P+
Sbjct: 218 LCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPD 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  FC++ ++D A  +   M +     N+VTY+ LI G   +     A ++  
Sbjct: 278 VVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLS 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I P+I++Y+ LI   C+   +E+A    +  ++  ++PD ++Y  L     K+ 
Sbjct: 338 EMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSE 397

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L D+M   G +P+    ++L +
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLME 426



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 39/243 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   G  PD++T+N++I G+C  +++D+A ++   +      PN +T+ +LI 
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLIS 321

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR ++A  + S+M  +G   +++TY+ LI  + ++  ++ AF +   M E  + P
Sbjct: 322 GLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP 381

Query: 131 NIVSYSILIDGLCKRGLMEEA---------------LYAFHCALD-----------NHLL 164
           + +SY  L   L K    +EA               L+ F+  ++            HLL
Sbjct: 382 DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441

Query: 165 ---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP----DGLLLSTLADY 211
                    P   TY +L+ G CKAGR  +A ++   M+  GI P     G ++ TLA  
Sbjct: 442 AVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLARE 501

Query: 212 NLQ 214
             Q
Sbjct: 502 GKQ 504



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 92/186 (49%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +L  ++  RG+ PDIITYN++I  +C   ++++A Q+   +    + P+ I++  L
Sbjct: 330 NEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTL 389

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
             A  K  R D+A  +   M + G   N+ T++ L++G   S+ +  A  +   M     
Sbjct: 390 AVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGC 449

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P   +Y +L+ GLCK G +++A       +   + P V +   ++    + G+   A+ 
Sbjct: 450 DPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALH 509

Query: 189 LYDSML 194
            +D ++
Sbjct: 510 YFDQVV 515



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 67/149 (44%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A ++   + +RG+ PD I+Y T+        R DEA  L + +      PN  TF 
Sbjct: 363 QIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFN 422

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C   R+D+A  + + M   G      TY  L+ G  K+  +  A +V   M   
Sbjct: 423 SLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSE 482

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF 155
            I P + S   ++  L + G  + AL+ F
Sbjct: 483 GIQPLVSSSGTIVHTLAREGKQDLALHYF 511



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    D A  L   + D G  P++ T+N+++ G C   RLDEA  L   +  V   P 
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+ +L+   CK GR+DDA  +   M+ +G +  V +   ++    +      A   ++
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFD 512

Query: 122 EM 123
           ++
Sbjct: 513 QV 514


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+  HLD   +L   +   G+ PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 185 IRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNG 244

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 245 VTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 304

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V YA LI G C+ GR
Sbjct: 305 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGR 364

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 365 SVDAEKMLREMLSVGLKPD 383



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    + P+  
Sbjct: 151 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVY 210

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y+ M
Sbjct: 211 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRM 270

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 271 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 326

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 327 EGDLDTAFEHRKRMIQENIRLDDVAYAAL 355



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 219 LCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPD 278

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 279 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK 338

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 339 RMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 398

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M RNG  P      ++  YN+  +G
Sbjct: 399 DVWKGSKLLKEMQRNGHAP------SVVTYNVLMNG 428



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 114 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 173

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G   +V TYS LI+G  K   M  A ++++
Sbjct: 174 VVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFD 233

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 234 EMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKG 293

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 294 DLKQAHDLIDEMSMKGLKPDKFTYTTLID 322



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 65/144 (45%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 72  FSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 131

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 132 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLD 191

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G++PD    S L
Sbjct: 192 EGFRLKSAMLASGVLPDVYTYSVL 215


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 124/214 (57%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+ ++  NG++PD    S +A+ NL   G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE-NLIEQG 703



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTC 55
           +LI  C     LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T 
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNM 113
           +   PN  ++ IL+   C E R  +A  +   M + G     +VV+Y+ +I+G+FK  ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A+  Y EM +  I PN+V+YS +I  LCK   M++A+      + N ++P+  TY  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           + GYC +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD +TY T+I   C   R+++A++ FE++   +L P +I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI + C   + D A  +  +ML++G   + + ++ +ID + K   +  +  +++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++YS LIDG C  G M+EA       +   + PD VTY  LI GYCK  R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 566 EDALVLFREMESSGVSPD 583



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+  TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  MF  M ++G K  + TY  L+ GY     +     + +
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SILI    K+G +++A+  F       L PD VTY  +I   CK+G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+   + P  ++ ++L
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSL 450



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 112/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + PN   F+ILI 
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+G++D A ++FSKM ++G   + VTY  +I    KS  ++ A   +E+M +  +SP
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             + Y+ LI  LC     ++A       LD  +  D + +  +I  +CK GR  E+ +L+
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+R G+ PD +  STL D
Sbjct: 503 DLMVRIGVKPDIITYSTLID 522



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL+L   + D G +  PD+++Y T+I G+     LD+A   + ++    + PN +T++ +
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A CK   MD A  + + M++ G   N  TY+ ++ GY  S   K A    ++M  + +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ L+D LCK G   EA   F       L P++ TY  L++GY   G   E   
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L D M+RNGI P+  + S L
Sbjct: 361 LLDLMVRNGIHPNHYVFSIL 380



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 110/197 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A++ F Q+ D  L P  I YN++I   C  ++ D+A +L  ++    +  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  + 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  +  +G
Sbjct: 598 RRTAAAKELYVGITESG 614



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+++A+ LF ++    + P+ IT+ I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++  + E G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+PDV TY+++     + G   E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+ SM  NG   +  +L+++    LQ
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQ 736



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 46/234 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-----FEKLTCVQLKPNSITF 65
           A  +F +L  RG    I   N   C    + R   A  +       +    ++ PN  T+
Sbjct: 38  ARHVFDELLRRGRGASIYGLN---CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY----- 120
            ILI + C  GR+D        +++KG + + + ++ L+ G    +    A D+      
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 121 ---------------EEMCENNIS------------------PNIVSYSILIDGLCKRGL 147
                          + +C+ N S                  P++VSY+ +I+G  K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +++A   +H  LD  +LP+VVTY+ +I   CKA    +AM++  SM++NG+MP+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T+ G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GR D+A  +F+ +   G   +V TYS + +   +   ++   D++  M EN  +
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N    + ++  L +RG +  A        + H   +  T ++ +      G+     Q 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL-DLLSGGK----YQE 776

Query: 190 YDSMLRNGI 198
           Y S +R GI
Sbjct: 777 YHSCIRGGI 785



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVSY 135
           +DA  +F ++L +G  A++   +C +    +  +  +A   Y  M     + ++PN+ +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSML 194
            ILI   C  G ++    A    +      D + +  L++G C   R ++AM +    M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 195 RNGIMPD----GLLLSTLADYN 212
           + G +P+     +LL  L D N
Sbjct: 155 QLGCIPNVFSYNILLKGLCDEN 176



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L    L+ +  T+N +I     + R DEA  LF  L+   L P+  T++++
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +   ++G +++   +F  M E G  AN    + ++    +  ++  A      + E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 129 SPNIVSYSILID 140
           S    + S+ +D
Sbjct: 756 SLEASTASLFLD 767


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 334 DSAFEHRKRMIQENIRLDEVAYTAL 358



 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 111/195 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 373 KMLREMLSVGLKPDA 387



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ SAF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGXKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLKQAHHLIDEMSVKGLKPDKITYTTLID 325



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVL 218


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+ L  ++  +G   D++TYNTI+ G C    L EA +LF ++T   L P+S 
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSY 471

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T TILID  CK G + +A  +F KM EK  K +VVTY+ L+DG+ K  ++ +A +++ +M
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM 531

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P  +S+SIL++ LC +G + EA   +   +   + P V+    +I+GYC++G  
Sbjct: 532 VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA 591

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++     + M+  G +PD +  +TL
Sbjct: 592 SDGEIFLEKMISEGFVPDCISYNTL 616



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++       ++ ++G+ PDI+TYNT+I  Y S   ++EA +L   +      P 
Sbjct: 235 LCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPG 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+  CK G+ + A  +F++ML  G   +  TY  L+    K  +     +++ 
Sbjct: 295 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFS 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++ P++V +S ++    + G +++AL  F+   +  L+PD V Y ILI+GYC+ G
Sbjct: 355 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EAM L + ML+ G   D +  +T+
Sbjct: 415 MISEAMNLRNEMLQQGCAMDVVTYNTI 441



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 37/232 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  A++LF ++ ++ ++ D++TYNT++ G+  +  +D A +++  +   ++ P  I+F+
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS 544

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANV----------------------------- 97
           IL++A C +G + +A  ++ +M+ K  K  V                             
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604

Query: 98  ------VTYSCLIDGYFKSQNMKSAFDVYEEMCENN--ISPNIVSYSILIDGLCKRGLME 149
                 ++Y+ LI G+ K +NM  AF + ++M E    + P++ +Y+ ++ G C+   M+
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           EA       ++  + PD  TY  LI G+      TEA + +D ML+ G  PD
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 114/208 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +  +LD AL  F  + + GL PD + Y  +I GYC    + EA+ L  ++       
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAM 433

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  ++   CK   + +A  +F++M E+G   +  T + LIDG+ K  N+++A +++
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E  I  ++V+Y+ L+DG  K G ++ A   +   +   +LP  ++++IL+   C  
Sbjct: 494 KKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSK 553

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G  +EA +++D M+   I P  ++ +++
Sbjct: 554 GHLSEAFRVWDEMISKSIKPTVMICNSM 581



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 106/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +L   +  +G  P + TYNT+I G C   + + A ++F ++    L P+S T+  
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CK+G   +   +FS M  +    ++V +S ++  + +S N+  A   +  + E  
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y+ILI G C++G++ EA+   +  L      DVVTY  ++ G CK     EA 
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L++ M   G+ PD   L+ L D
Sbjct: 456 KLFNEMTERGLFPDSYTLTILID 478



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 118/213 (55%), Gaps = 3/213 (1%)

Query: 1   MLIKECHLDAALK---LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +L++ C    A++   +F  +  R + PD++ +++++  +     LD+A+  F  +    
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+++ +TILI  +C++G + +A  + ++ML++G   +VVTY+ ++ G  K + +  A 
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ EM E  + P+  + +ILIDG CK G ++ A+  F    +  +  DVVTY  L+ G+
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            K G    A +++  M+   I+P  +  S L +
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILPTPISFSILVN 548



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 105/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A ++F ++   GL PD  TY +++   C      E   +F  +    + P+
Sbjct: 305 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++  F + G +D A M F+ + E G   + V Y+ LI GY +   +  A ++  
Sbjct: 365 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRN 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +   + ++V+Y+ ++ GLCKR ++ EA   F+   +  L PD  T  ILI G+CK G
Sbjct: 425 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLG 484

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               AM+L+  M    I  D +  +TL D
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLD 513



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KLF ++T+RGL PD  T   +I G+C L  L  A++LF+K+   ++K +
Sbjct: 445 LCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLD 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D F K G +D A  +++ M+ K      +++S L++      ++  AF V++
Sbjct: 505 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWD 564

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   +I P ++  + +I G C+ G   +        +    +PD ++Y  LI G+ K  
Sbjct: 565 EMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEE 624

Query: 182 RPTEAMQLYDSM--LRNGIMPD 201
             ++A  L   M   + G++PD
Sbjct: 625 NMSKAFGLVKKMEEKQGGLVPD 646



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 102/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   L  A + F  L  +G    I   N +I     +  ++ A +++++++   +  N
Sbjct: 165 FVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVN 224

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T  I+++A CK+G+M+      S++ EKG   ++VTY+ LI  Y     M+ AF++  
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     SP + +Y+ +I+GLCK G  E A   F   L + L PD  TY  L+   CK G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              E   ++  M    ++PD +  S++
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSM 371



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 35/183 (19%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   F +LI  F +  ++ +A   F+ +  KG   ++   + LI    +   ++ A+ +Y
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 121 EEMCENNISPNIVSYSILIDGLCK-----------------------------------R 145
           +E+  + +  N+ + +I+++ LCK                                   +
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           GLMEEA    H        P V TY  +I G CK G+   A +++  MLR+G+ PD    
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 206 STL 208
            +L
Sbjct: 334 RSL 336


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 119/208 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
             +K+  +D   K   ++ + G  PDI+TYNT+I  +C + ++DEA +L +++    LK 
Sbjct: 381 WFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKM 440

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T   ++ A C+E ++D+A  +      +G   + V+Y  LI GYFK +    A  ++
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLW 500

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  I P+I++Y+ +I GLC+ G   +A+      L++ L+PD +TY  +I GYC+ 
Sbjct: 501 DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQE 560

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G+  +A Q ++ M+     PD +  +TL
Sbjct: 561 GQVEKAFQFHNKMVEKNFKPDVVTCNTL 588



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  L   + ++GL P+  T+N ++ G C L  L EA  + E ++   + P+
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+ ++I  FCK+GR+ +A  +  +M       +VVTY+ LI+G F+  + +  F + E
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+Y++++    K+G M+E         ++  LPD+VTY  LI  +CK G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA +L D M R G+  D + L+T+
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTM 448



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 106/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A++L  ++ +  L PD++TYNT+I G       +E  +L E++    +KPNS+
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +++  F K+G+MD+      KM E G   ++VTY+ LI  + K   M  AF + +EM
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  + V+ + ++  LC+   ++EA      A       D V+Y  LI GY K  + 
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 184 TEAMQLYDSMLRNGIMP 200
           ++A++L+D M    I+P
Sbjct: 494 SQALRLWDEMKEKEIIP 510



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD A  L      RG   D ++Y T+I GY    +  +A++L++++   ++ P+
Sbjct: 452 LCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +I   C+ G+ + A     ++LE G   + +TY+ +I GY +   ++ AF  + 
Sbjct: 512 IITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E N  P++V+ + L+ GLCK G++E+AL  F+  +      D V+Y  +I   CK  
Sbjct: 572 KMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L + M    + PD
Sbjct: 632 RFGEAFDLLEEMEEKKLGPD 651



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 7/215 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLN-----RLDEAVQLFEKLTCVQLKPNSITF 65
           A ++F ++   G++P ++T NT++            RL +AV  F     + +K N+ +F
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAV--FTDFIKIGVKINTNSF 200

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            ILI   C E R  +A  +  KM + G   + +TY+ ++DG  K   +  A D+  +M  
Sbjct: 201 NILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKN 260

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + PN  +++IL+ G C+ G ++EA         N ++PD  TY ++I G+CK GR  E
Sbjct: 261 KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAE 320

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           AM+L + M    + PD +  +TL +   +   S+E
Sbjct: 321 AMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEE 355



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 106/198 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F      G++ +  ++N +I G C  NR  EA+++  K+      P++IT+  ++D  C
Sbjct: 184 VFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLC 243

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K+GR+++A  +   M  KG   N  T++ L+ G  +   +K A +V E M +N++ P+  
Sbjct: 244 KKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+++I G CK+G + EA+       +  L PDVVTY  LI G  + G   E  +L + M
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+ P+ +  + +  +
Sbjct: 364 EGRGMKPNSVTYNVMVKW 381



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 97/187 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L+ ++ ++ + P IITYN++I G C + + ++A+   ++L    L P+ IT+  +I 
Sbjct: 496 ALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIH 555

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+EG+++ A    +KM+EK  K +VVT + L+ G  K   ++ A  ++          
Sbjct: 556 GYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDV 615

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + VSY+ +I  LCK     EA        +  L PD  TY  ++ G   AGR  +A +  
Sbjct: 616 DAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFI 675

Query: 191 DSMLRNG 197
             +   G
Sbjct: 676 SKIAEKG 682



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 12/145 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ ALKLF     +G + D ++YNTII   C   R  EA  L E++   +L P+
Sbjct: 592 LCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  ++      GRM DA    SK+ EKG   N            K Q+ +++ ++ +
Sbjct: 652 CYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLE------LGKRQDARTS-EIPQ 704

Query: 122 EMCENNISPNIVSYSILIDGLCKRG 146
           E       PN ++YS  I+ LC +G
Sbjct: 705 EP-----HPNAIAYSNKINELCSQG 724


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 121/221 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  AL L  ++  +G +PD+ TYN++I G C ++R+DEA +LF  +       N
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LI A  + G    A  + + ML +G   + +TY+ LI  + K  N++   ++YE
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + +  + +S +I+I+GLCK G ++ A      A++   +PD+VTY  ++ G CK G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           R  EA+ L+D +   G+ PD    +T   +  +     + C
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDAC 690



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  +++ RG EP++ITY  ++ G C    L+EA  +  +++   L  N
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+ +  LI A C++ ++  A  + S+M  KG K ++ TY+ LI G  K   +  AF ++ 
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    N V+Y+ LI  L +RG  ++AL   +  L      D +TY  LI+ +CK G
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              + ++LY+ M+ +G+  D
Sbjct: 580 NIEKGLELYEQMIMDGLGAD 599



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 40/246 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL  ++  RG  PD +TY  ++ G C + +L+EA ++  K+ C    PN+     LI+
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLIN 362

Query: 71  AFCKEGRMDDATMMFSK-MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            +   G++ +A    ++ M+  G + ++ TY+ L+ G  K  ++  A D+  EM      
Sbjct: 363 GYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCE 422

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFH------------------CAL----DNHLL--- 164
           PN+++Y+IL++GLCK GL+EEA    H                  CAL      H+    
Sbjct: 423 PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNL 482

Query: 165 ----------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
                     PD+ TY  LI G CK  R  EA +L+ +ML +G + + +  +TL    L+
Sbjct: 483 LSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLR 542

Query: 215 SSGSQE 220
               Q+
Sbjct: 543 RGAFQK 548



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 97/184 (52%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G +PDI TYN ++ G C    L  A  L  +++    +PN IT+ IL++  CK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +++A ++  +M  +G   N V Y+CLI    + + +  A ++  EMC     P++ +Y+ 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI GLCK   ++EA   FH  L +  + + VTY  LI    + G   +A+ L + ML  G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 198 IMPD 201
              D
Sbjct: 561 CTLD 564



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 32/234 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+A  L   +T  G  P+ I Y T+I      N++ EA++L E++  +   P+  TF 
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKG-------------------------------PKA 95
            +I   CK  ++ DAT +  +ML +G                               P  
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP 352

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEE-MCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           N    + LI+GY  S  +K A     E M      P+I +Y+IL+ GLCK G +  A   
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +        P+V+TYAIL+ G CKAG   EA  +   M   G+  + ++ + L
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 69/122 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +      +RG  PDI+TYN+++ G C + R+ EA+ LF++L    ++P+
Sbjct: 610 LCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPD 669

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+   I   CKEG ++DA   F + +E G   + +T++ L+    K  N ++ F V +
Sbjct: 670 AFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLD 729

Query: 122 EM 123
           E+
Sbjct: 730 EL 731



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 4/197 (2%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EP   +Y+ ++    + N    A  +F  +    + P   TF I++ A C    +D A  
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +   M + G   N + Y  LI    +   +  A  + EEM      P++ +++ +I GLC
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   + +A       L     PD +TY  L+ G C+ G+  EA ++   +      P+  
Sbjct: 300 KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNA 355

Query: 204 LLSTLADYNLQSSGSQE 220
           +L+TL +  + S   +E
Sbjct: 356 ILNTLINGYVMSGQLKE 372



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 73/151 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++  L+L+ Q+   GL  D I+ N +I G C + ++D A +           P+ +
Sbjct: 577 KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK GR+ +A  +F ++  +G + +  TY+  I    K   +  A   +   
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRG 696

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            EN   P+ +++++L+  L K+   E   + 
Sbjct: 697 IENGFVPSNLTWNVLVYTLLKQSNQENNFFV 727


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E   + A ++  Q+   G+ P++ITYNT+I G+C + +L +A+ L   L    L P+
Sbjct: 313 LCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPS 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+  FCK+G    A  +  +M E+G K + VTY+ LID + +S NM+ A  +  
Sbjct: 373 LVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRS 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  ++P++ +YS+LI G C +G M EA   F   ++    P+ V Y  ++ GYCK G
Sbjct: 433 SMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEG 492

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A++L+  M    + P+
Sbjct: 493 SSYRALRLFREMEEKELPPN 512



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 117/208 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A K+F ++ +RG+  +I+TYNT+I G C   + +EA ++ +++    + PN
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID FC   ++  A  +   +  +G   ++VTY+ L+ G+ K  +   A  V +
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I P+ V+Y+ILID   +   ME+A+       +  L PDV TY++LI G+C  G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           R  EA +L+ SM+     P+ ++ +T+ 
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMV 485



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 104/202 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   L  RGL P ++TYN ++ G+C       A ++ +++    +KP+ +T+TI
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F +   M+ A  + S M E G   +V TYS LI G+     M  A  +++ M E  
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V Y+ ++ G CK G    AL  F    +  L P+V +Y  +I   CK  +  EA 
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L + M+ +GI P   +L+ ++
Sbjct: 534 GLVEKMIDSGIGPSDSILNLIS 555



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 104/185 (56%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D+ ++  +I G C    ++++  L  +L      PN + +T LID  CK+G ++ A  +F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M + G  AN  TY+ LI G FK+   K  F++YE+M E+ + PN+ +Y+ +++ LCK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G  ++A   F    +  +  ++VTY  LI G C+  +  EA ++ D M  +GI P+ +  
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 206 STLAD 210
           +TL D
Sbjct: 342 NTLID 346



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 107/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A  LF ++   GL  +  TY  +I G        +  +++EK+    + PN  
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK+GR  DA  +F +M E+G   N+VTY+ LI G  +      A +V ++M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I+PN+++Y+ LIDG C    + +AL          L P +VTY IL+ G+CK G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A ++   M   GI P  +  + L D
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILID 416



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 10/221 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C     ++ +  L  +L + G  P+++ Y T+I G C    +++A  LF ++   
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKF 227

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L  N  T+T+LI    K G       M+ KM E G   N+ TY+C+++   K    K A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDA 287

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V++EM E  +S NIV+Y+ LI GLC+     EA         + + P+++TY  LI G
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDG 347

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +C   +  +A+ L   +   G+ P      +L  YN+  SG
Sbjct: 348 FCGVRKLGKALSLCRDLKSRGLSP------SLVTYNILVSG 382



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 104/196 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+     A K+  ++ +RG++P  +TY  +I  +   + +++A+QL   +  + L P+  
Sbjct: 385 KKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVH 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI  FC +GRM++A+ +F  M+EK  + N V Y+ ++ GY K  +   A  ++ EM
Sbjct: 445 TYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREM 504

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN+ SY  +I+ LCK    +EA       +D+ + P      ++ R    +   
Sbjct: 505 EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRAKNDSHSR 564

Query: 184 TEAMQLYDSMLRNGIM 199
           +   +   SM+ +G+M
Sbjct: 565 SMDEEEPASMVFDGLM 580


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 117/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+   G++PD +TYNT+I GY +L +  +AV++F+++T   + PN
Sbjct: 256 LCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPN 315

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T +  +   CK GR+++A   F  ML KG K N+++YS L+ GY  +  +    +++ 
Sbjct: 316 TVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFN 375

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I PN   ++IL++G  K G++ EA++ F       L PDV+TY  +I  +C+ G
Sbjct: 376 LMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMG 435

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +AM  ++ M+  G+ P+
Sbjct: 436 SMDDAMDKFNHMIDKGVEPN 455



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 106/191 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F  + D+G+EP+   Y  +I G+C+   L +A +L  ++    L P  ++F  
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  CKEGR+ +A  +F  ++  G KA+V  ++ LIDGY     M  AF V++ M    
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+IV+Y  L++G CK G +++ L  F   L   + P   TY I++ G   AGR   A 
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616

Query: 188 QLYDSMLRNGI 198
           +++  M+ +GI
Sbjct: 617 EMFQEMIESGI 627



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A ++F  +   G + D+  + ++I GYC + ++ EA ++ + +  V ++P+
Sbjct: 501 LCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L++  CK GR+DD  ++F ++L KG K    TY  ++DG F +    +A ++++
Sbjct: 561 IVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCK 179
           EM E+ I+  I +YSIL+ GLC+    EEA+  F   CA++     D+V   I+I    K
Sbjct: 621 EMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKF--DIVILNIMISKMFK 678

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           A R  EA  L+ S+   G++P  +   T+   NL   GS E
Sbjct: 679 ARRREEAEGLFASIPDYGLVPT-VQTYTIMMENLIKEGSVE 718



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
            LD A   FG L  +G++ D+I  ++++ G C   R DEAV  LF ++  +   P++I++
Sbjct: 118 RLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISY 177

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           + ++ + C +GR   A  +    +++G     NVV YS ++ G FK   +  A D++ EM
Sbjct: 178 STVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEM 237

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN+V+Y+ +I  LCK   +++A       + N + PD VTY  LI GY   G+ 
Sbjct: 238 TQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQW 297

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            +A++++  M   G++P+ +  ST   +
Sbjct: 298 KQAVRMFKEMTSRGVIPNTVTCSTFVAF 325



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 107/197 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  +   G+ P+   +N ++ GY     + EA+ +FE +    L P+ +T+  +I AFC
Sbjct: 373 LFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFC 432

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G MDDA   F+ M++KG + N   Y CLI G+    ++  A ++  E+    + P I+
Sbjct: 433 RMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCIL 492

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           S++ LI+ LCK G + EA   F   +      DV  +  LI GYC  G+ +EA +++D+M
Sbjct: 493 SFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAM 552

Query: 194 LRNGIMPDGLLLSTLAD 210
           +  GI PD +   TL +
Sbjct: 553 VSVGIEPDIVTYGTLVN 569



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 106/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A ++   +   G+EPDI+TY T++ G C   R+D+ + LF +L    +KP + T+ I
Sbjct: 542 MSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGI 601

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D     GR   A  MF +M+E G    + TYS L+ G  ++   + A  V++++C  N
Sbjct: 602 ILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMN 661

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +IV  +I+I  + K    EEA   F    D  L+P V TY I++    K G   EA 
Sbjct: 662 VKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAE 721

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++  ML++G+ P    ++ +
Sbjct: 722 GVFSVMLKSGLSPTSHFINVI 742



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 100/185 (54%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           +++ Y+T++ G     ++ EA  LF ++T   + PN +T+  +I A CK   +D A  + 
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M+  G + + VTY+ LI GY      K A  +++EM    + PN V+ S  +  LCK 
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +EEA   F   L      ++++Y+ L+ GY  AG   +   L++ M+R+GI+P+  + 
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 206 STLAD 210
           + L +
Sbjct: 390 NILVN 394



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 44/206 (21%)

Query: 46  AVQLFEKLTC-----VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           AV LF +++      V L P   T++ILID  C+  R+D A   F  +L +G KA+V+  
Sbjct: 83  AVALFNRMSTGTGPRVAL-PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVV 141

Query: 101 SCLIDGYFKSQNMKSAFDV-YEEMCENNISP----------------------------- 130
           S L+ G   ++    A DV +  M E    P                             
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201

Query: 131 --------NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
                   N+V YS ++ GL K G + EA   FH      + P+VVTY  +I   CKA  
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A  +   M+ NG+ PD +  +TL
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTL 287



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 96/181 (53%), Gaps = 2/181 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA ++F ++ + G+   I TY+ ++ G C  N  +EA+ +F+KL  + +K + +   I+I
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
               K  R ++A  +F+ + + G    V TY+ +++   K  +++ A  V+  M ++ +S
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQ 188
           P     ++++  L ++G + +A   + C +D   +L +  T ++L+  +   G+  E + 
Sbjct: 734 PTSHFINVIVRTLLEKGEIVKA-GIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLN 792

Query: 189 L 189
           L
Sbjct: 793 L 793


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 124/214 (57%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+ ++  NG++PD    S +A+ NL   G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE-NLIEQG 703



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTC 55
           +LI  C     LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T 
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNM 113
           +   PN  ++ IL+   C E R  +A  +   M + G     +VV+Y+ +I+G+FK  ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A+  Y EM +  I PN+V+YS +I  LCK   M++A+      + N ++P+  TY  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           + GYC +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD +TY T+I   C   R+++A++ FE++   +L P +I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI + C   + D A  +  +ML++G   + + ++ +ID + K   +  +  +++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++YS LIDG C  G M+EA       +   + PD VTY  LI GYCK  R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 566 EDALVLFREMESSGVSPD 583



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+  TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  MF  M ++G K  + TY  L+ GY     +     + +
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SILI    K+G +++A+  F       L PD VTY  +I   CK+G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+   + P  ++ ++L
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSL 450



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + PN
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F+ILI A+ K+G++D A ++FSKM ++G   + VTY  +I    KS  ++ A   +E
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  +SP  + Y+ LI  LC     ++A       LD  +  D + +  +I  +CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E+ +L+D M+R G+ PD +  STL D
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLID 522



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL+L   + D G +  PD+++Y T+I G+     LD+A   + ++    + PN +T++ +
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A CK   MD A  + + M++ G   N  TY+ ++ GY  S   K A    ++M  + +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ L+D LCK G   EA   F       L P++ TY  L++GY   G   E   
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L D M+RNGI P+  + S L
Sbjct: 361 LLDLMVRNGIHPNHYVFSIL 380



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 110/197 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A++ F Q+ D  L P  I YN++I   C  ++ D+A +L  ++    +  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  + 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  +  +G
Sbjct: 598 RRTAAAKELYVGITESG 614



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+++A+ LF ++    + P+ IT+ I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++  + E G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+PDV TY+++     + G   E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+ SM  NG   +  +L+++    LQ
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQ 736



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 46/234 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-----FEKLTCVQLKPNSITF 65
           A  +F +L  RG    I   N   C    + R   A  +       +    ++ PN  T+
Sbjct: 38  ARHVFDELLRRGRGASIYGLN---CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY----- 120
            ILI + C  GR+D        +++KG + + + ++ L+ G    +    A D+      
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 121 ---------------EEMCENNIS------------------PNIVSYSILIDGLCKRGL 147
                          + +C+ N S                  P++VSY+ +I+G  K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +++A   +H  LD  +LP+VVTY+ +I   CKA    +AM++  SM++NG+MP+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T+ G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GR D+A  +F+ +   G   +V TYS + +   +   ++   D++  M EN  +
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N    + ++  L +RG +  A        + H   +  T ++ +      G+     Q 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL-DLLSGGK----YQE 776

Query: 190 YDSMLRNGI 198
           Y S +R GI
Sbjct: 777 YHSCIRGGI 785



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVSY 135
           +DA  +F ++L +G  A++   +C +    +  +  +A   Y  M     + ++PN+ +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSML 194
            ILI   C  G ++    A    +      D + +  L++G C   R ++AM +    M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 195 RNGIMPD----GLLLSTLADYN 212
           + G +P+     +LL  L D N
Sbjct: 155 QLGCIPNVFSYNILLKGLCDEN 176



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L    L+ +  T+N +I     + R DEA  LF  L+   L P+  T++++
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +   ++G +++   +F  M E G  AN    + ++    +  ++  A      + E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 129 SPNIVSYSILID 140
           S    + S+ +D
Sbjct: 756 SLEASTASLFLD 767


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 117/198 (59%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  LK+  ++  +G E   +TYNTII G     RL++A+ L+  L      P   
Sbjct: 881  KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 940

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K GR++DA  +F++MLE G KAN   Y+ L++G+  + N +    ++++M
Sbjct: 941  TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 1000

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  I+P+I SY+I+ID LCK G + + L  F   L+  L PD++TY +LI G  K+ R 
Sbjct: 1001 VDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL 1060

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ L++ M + GI+P+
Sbjct: 1061 EEAVSLFNEMQKKGIVPN 1078



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   ++ A  LF ++ + G + +   YN ++ G+      ++   LF+ +    + P+
Sbjct: 949  LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1008

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TI+ID  CK G+++D    F ++LE G + +++TY+ LIDG  KS+ ++ A  ++ 
Sbjct: 1009 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 1068

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM +  I PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 1069 EMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSG 1128

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
                A   Y  M+  G +P+
Sbjct: 1129 STDSAYAAYGRMIVGGCLPN 1148



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 110/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  L L  ++   G++P++ +Y   I       R DEA ++  ++     KP+ I
Sbjct: 286 KRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVI 345

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T+LI   C  GR+ DA  +F KM +   K + VTY  L+D +  +   +S  +++  M
Sbjct: 346 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAM 405

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N+V+Y+ +ID LC+ G + EAL  F       ++P+  +Y  LI G+ KA R 
Sbjct: 406 KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRF 465

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            +A++L+  M  +G  P+G       +Y  +S  S
Sbjct: 466 GDALELFKYMDIHGPKPNGYTHVLFINYYGKSGES 500



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 104/201 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + ++++  +   G   +++ Y  +I   C + R+ EA+++F+++    + P   ++  LI
Sbjct: 397 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 456

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K  R  DA  +F  M   GPK N  T+   I+ Y KS     A   YE M    I 
Sbjct: 457 SGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 516

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+ + ++ GL K G +  A   FH      + PD +TY ++I+   KA +  EA+++
Sbjct: 517 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 576

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+ N  +PD L++++L D
Sbjct: 577 FYDMIENNCVPDVLVVNSLID 597



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F +L   G+ PD ITY  +I      ++ DEAV++F  +      P+
Sbjct: 529 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 588

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K GR D+A  +F ++ E   +    TY+ L+ G  +   +K    + E
Sbjct: 589 VLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 648

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +N  PN+++Y+ ++D LCK G + +AL   +       +PD+ +Y  +I G  K  
Sbjct: 649 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 708

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  ++  M +  ++PD   L T+
Sbjct: 709 RYNEAFSIFCQM-KKVLIPDYATLCTI 734



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++F ++  +G+ P+  +YN++I G+   +R  +A++LF+ +     KPN  T  + I+
Sbjct: 433 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFIN 492

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G    A   +  M  KG   +VV  + ++ G  KS  +  A  V+ E+    +SP
Sbjct: 493 YYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP 552

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+++I    K    +EA+  F+  ++N+ +PDV+    LI    KAGR  EA Q++
Sbjct: 553 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIF 612

Query: 191 DSMLRNGIMP-DGLLLSTLA 209
             +    + P DG   + LA
Sbjct: 613 YQLKEMNLEPTDGTYNTLLA 632



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 107/202 (52%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ +  +  +G+ PD++  N ++ G     RL  A ++F +L  + + P++IT+T++I 
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 562

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K  + D+A  +F  M+E     +V+  + LID  +K+     A+ ++ ++ E N+ P
Sbjct: 563 CCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEP 622

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ L+ GL + G ++E ++       ++  P+++TY  ++   CK G   +A+ + 
Sbjct: 623 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 682

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
            SM   G +PD      L+ YN
Sbjct: 683 YSMTTKGCIPD------LSSYN 698



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 98/191 (51%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A +L  +    G+     +YN++ICG    N +D A  LF ++  +   P+  T+ +L+D
Sbjct: 818  AHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 877

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            A  K  R+++   +  +M  KG ++  VTY+ +I G  KS+ ++ A D+Y  +     SP
Sbjct: 878  AMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 937

Query: 131  NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
               +Y  L+DGL K G +E+A   F+  L+     +   Y IL+ G+  AG   +   L+
Sbjct: 938  TPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLF 997

Query: 191  DSMLRNGIMPD 201
              M+  GI PD
Sbjct: 998  QDMVDQGINPD 1008



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K CHL      F  + D+G+ PDI +Y  II   C   +L++ +  F +L  + L+P+ I
Sbjct: 992  KVCHL------FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1045

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ +LID   K  R+++A  +F++M +KG   N+ TY+ LI    K+     A  +YEE+
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
                  PN+ +Y+ LI G    G  + A  A+   +    LP+  T
Sbjct: 1106 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 103/201 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L+K      AL+++  +   G+ P + TY+ ++  +     ++  + L  ++    +KP
Sbjct: 248 FLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 307

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  ++TI I    +  R D+A  + ++M  +G K +V+T++ LI     +  +  A DV+
Sbjct: 308 NVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 367

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +++  P+ V+Y  L+D     G  +  +  ++    +    +VV Y  +I   C+ 
Sbjct: 368 WKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 427

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR  EA++++D M + GI+P+
Sbjct: 428 GRVFEALEMFDEMKQKGIVPE 448



 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K+   + +++    +   G+  D      +I   C   +  EA +L +K     +   
Sbjct: 774 ILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 833

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LI     E  +D A  +F++M E G   +  TY+ L+D   KS  ++    V E
Sbjct: 834 TGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 893

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K   +E+A+  ++  +     P   TY  L+ G  KAG
Sbjct: 894 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 953

Query: 182 RPTEAMQLYDSMLRNG 197
           R  +A  L++ ML  G
Sbjct: 954 RIEDAENLFNEMLEYG 969



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 2/160 (1%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+  L+    K G   +A  ++  M+  G   +V TYS L+  + K +++++   + 
Sbjct: 238 NAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLL 297

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCK 179
            EM  + + PN+ SY+I I  L +    +EA Y     ++N    PDV+T+ +LI+  C 
Sbjct: 298 REMEAHGVKPNVYSYTICIRVLGQARRFDEA-YRILAEMENEGCKPDVITHTVLIQVLCD 356

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           AGR ++A  ++  M ++   PD +   TL D    +  SQ
Sbjct: 357 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 5/179 (2%)

Query: 28  ITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + + T  C Y         R+ +  ++F+ +    +K N  TF  +      EG +  A 
Sbjct: 165 VVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 224

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           +    M E G   N  TY+ L+    KS   + A +VY+ M  + + P++ +YS+L+   
Sbjct: 225 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAF 284

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            KR  +E  L+       + + P+V +Y I IR   +A R  EA ++   M   G  PD
Sbjct: 285 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPD 343



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 43/252 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL +   +T +G  PD+ +YNT+I G     R +EA  +F ++  V L P+
Sbjct: 669 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 727

Query: 62  SITFTILIDAFCKEGRMDDATMMFSK-MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             T   ++ +F K G M +A  +  +  L+ G K +  +   L++G  K    + + +  
Sbjct: 728 YATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFA 787

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCAL-------------DN 161
           E +  + I+ +      LI  LCK+    EA        +F  +L             D 
Sbjct: 788 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDE 847

Query: 162 HLL----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           +L+                PD  TY +L+    K+ R  E +++ + M R G        
Sbjct: 848 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE------ 901

Query: 206 STLADYNLQSSG 217
           ST   YN   SG
Sbjct: 902 STYVTYNTIISG 913



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 37/235 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------- 50
           L+KE   + A  +F Q+  + L PD  T  TI+  +  +  + EA+ +            
Sbjct: 704 LVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKT 762

Query: 51  EKLTCVQL---------KPNSITFT-------ILIDAF---------CKEGRMDDATMMF 85
           ++ +C  L            SI F        I +D F         CK+ +  +A  + 
Sbjct: 763 DRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 822

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            K    G      +Y+ LI G      +  A  ++ EM E    P+  +Y++L+D + K 
Sbjct: 823 KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 882

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +EE L               VTY  +I G  K+ R  +A+ LY +++  G  P
Sbjct: 883 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSP 937


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 334 DSAFEHRKRMIQENIRLDEVAYTAL 358



 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 111/195 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 373 KMLREMLSVGLKPDA 387



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ SAF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLKQAHHLIDEMSVKGLKPDKITYTTLID 325



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E      + T   +++   K +  K  +  YEE+
Sbjct: 74  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEI 133

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L  +ML +G+ PD    S L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVL 218


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 112/197 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA+++F  +  RGL P+ + Y+ +I G C   ++D A+++  ++      P+
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+ ILID  CK G +  A   F +MLE G K +V TY+ LI G+ K+ N  +A  V++
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 303

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +  SPN+V+Y  LI GLCKR  + +A   +    +    PD   Y+ L+ G CK+G
Sbjct: 304 DMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSG 363

Query: 182 RPTEAMQLYDSMLRNGI 198
           +      L+D M R+G+
Sbjct: 364 KLEGGCMLFDEMERSGV 380



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A  ++  +T +G  PD++T +T+I G C   R+  AV++F+ +    L PN
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LI   CK  +MD A  M ++M +     + +TY+ LIDG  KS ++ +A   ++
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++ +Y+ILI G CK G  + A   F     +   P+VVTY  LI G CK  
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + T+A   Y  M   G  PD  + S+L D  L  SG  E
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVD-GLCKSGKLE 366



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 106/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF ++  RGL  D + Y  +I G     ++ +A  +++ +T     P+ +T + +ID
Sbjct: 123 AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+  A  +F  M  +G   N V YS LI G  K++ M  A ++  +M +   +P
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 242

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ILIDGLCK G +  A   F   L+    PDV TY ILI G+CKAG    A  ++
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 302

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M  +   P+ +   TL
Sbjct: 303 DDMSSSRCSPNVVTYGTL 320



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L  A  L  + T  G   DI TY TI+       ++ EAV L EK+T     P 
Sbjct: 9   LVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPT 68

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L++  CK GR+++A  +  K+++ G   +VVTY+ LIDG  K +    A+ +++
Sbjct: 69  IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFK 128

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++ + V Y+ LI GL + G + +A   +        +PDVVT + +I G CKAG
Sbjct: 129 EMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 188

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R   A++++ SM   G+ P+ ++ S L
Sbjct: 189 RIGAAVRIFKSMEARGLAPNEVVYSAL 215



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 107/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+ L  ++T  G  P I TYN ++ G C + RL+EA+ L  K+      P+
Sbjct: 44  LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 103

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID   K+ R  +A  +F +M  +G   + V Y+ LI G  ++  +  A  VY+
Sbjct: 104 VVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYK 163

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+ S +IDGLCK G +  A+  F       L P+ V Y+ LI G CKA 
Sbjct: 164 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A+++   M +    PD +  + L D
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILID 252



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 2/192 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA   F ++ + G +PD+ TYN +I G+C     D A  +F+ ++  +  PN
Sbjct: 254 LCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPN 313

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK  ++  A++ +  M E+G   +   YS L+DG  KS  ++    +++
Sbjct: 314 VVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 373

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + ++ N  + + LI  LCK   ++EA+  F+ A+    +P    Y  +I    K+G
Sbjct: 374 EMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFN-AIRKEGMPHPYAYNSIISALIKSG 431

Query: 182 RPTEAMQLYDSM 193
           +  E   +Y  M
Sbjct: 432 KVNEGQAVYQEM 443



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 93/182 (51%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T++ +I G      L +A  L ++ T      +  T+T ++D   K  ++ +A  +  K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G    + TY+ L++G  K   ++ A D+  ++ +N  +P++V+Y+ LIDGL K+   
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F       L  D V Y  LIRG  +AG+  +A  +Y +M   G +PD + LST+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 209 AD 210
            D
Sbjct: 181 ID 182



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 81/152 (53%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ILI+   K G +  A  +  +    G   ++ TY+ ++D   K++ ++ A  + E++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N  +P I +Y+ L++GLCK G +EEA+      +DN   PDVVTY  LI G  K  R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            EA +L+  M   G+  D +  + L    LQ+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 129/238 (54%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A K+  ++   GL PD++TY  +ICG+C +  ++E+ +L EK+    LK + +T+T+
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ + CK GR+D+A ++  +M   G K +++TYS LI G  K   ++ A ++YEEMC   
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 128 ISPN-----------------------------------IVSYSILIDGLCKRGLMEEAL 152
           I PN                                   I+ Y+I+IDG  K G + EA+
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++   ++  + P +VT+  LI G+CK G+  EA++L D++  +G++P  +  +TL +
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 593



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  A   F  +T   +  +II YN +I GY  L  + EAV+ ++++    + P 
Sbjct: 490 LFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 549

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  FCK+G++ +A  +   +   G     VTY+ L++GY +  +M S FD+  
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLH 609

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I P  ++Y++++ GLCK G + E++          L PD +TY  +I+ +CKA 
Sbjct: 610 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 669

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A QL++ ML++ + P  +  + L +
Sbjct: 670 DLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 107/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++   GL+PD++TY+ +I G C    ++EA++L+E++   ++ PN
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S   + +I    ++G + +A M F  + +      ++ Y+ +IDGY K  N+  A   Y+
Sbjct: 480 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E  ISP IV+++ LI G CK+G + EA+        + L+P  VTY  L+ GYC+ G
Sbjct: 540 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 599

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                  +   M    I P
Sbjct: 600 DMHSMFDMLHEMEAKAIKP 618



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 103/194 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A+KL   +   GL P  +TY T++ GYC    +     +  ++    +KP  I
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+++   CKEGR+ ++  +   M  +G   + +TY+ +I  + K+ +++ AF ++ +M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++++ P+ V+Y++LI+GLC  G +++A        D  +    V Y  +I+ +C  G  
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741

Query: 184 TEAMQLYDSMLRNG 197
             A+  +  M+  G
Sbjct: 742 QNALVFFHQMVERG 755



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 107/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  +++L   +  RGL PD ITYNT+I  +C  + L +A QL  ++    L+P+
Sbjct: 630 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 689

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LI+  C  G + DA  +   + ++  +   V Y+ +I  +    ++++A   + 
Sbjct: 690 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 749

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E     +I  YS +I+ LCKR L+ +A + F   L + + PD     +++  + ++G
Sbjct: 750 QMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSG 809

Query: 182 RPTEAMQLYDSMLRNGIMP 200
            P    +++  M++ G++P
Sbjct: 810 DPNSVFEIFAMMIKCGLLP 828



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+    +       P ++++N ++ G+C +  +D A   F  +    L P+
Sbjct: 245 LCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPD 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ IL+   C  G M++A    + M   G + ++VTY+ L +G+     +  A+ V +
Sbjct: 305 VYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQ 364

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N ++P++V+Y+ILI G C+ G +EE+       L   L   +VTY +L+   CK+G
Sbjct: 365 RMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSG 424

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  EA+ L   M   G+ PD L  S L  + L   G+ E  I
Sbjct: 425 RIDEAVILLHEMEVIGLKPDLLTYSVLI-HGLCKRGAVEEAI 465



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H D    ++ ++   G+  +  T   +I G C  +RL +AV    +    +  P+ ++F 
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FCK G +D A   F  M++ G   +V +Y+ L+ G   + +M+ A +   +M  +
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENH 334

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+IV+Y+IL +G    GL+  A       L N L PD+VTY ILI G+C+ G   E+
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 187 MQLYDSMLRNG----IMPDGLLLSTL 208
            +L + ML  G    I+   +LLS+L
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSL 420



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 101/198 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  + +   +  ++  + ++P  ITY  ++ G C   RL E+VQL + +    L P+ I
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I +FCK   +  A  + ++ML+   + + VTY+ LI+G     N+K A  +   +
Sbjct: 657 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 716

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + +I    V+Y+ +I   C +G ++ AL  FH  ++      +  Y+ +I   CK    
Sbjct: 717 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 776

Query: 184 TEAMQLYDSMLRNGIMPD 201
           T+A   +  ML +GI PD
Sbjct: 777 TDAKFFFCMMLTHGIPPD 794



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 9/197 (4%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R  + + + ++ + C Y     + +A+ +  K+  + L+ +  T+  L+        M D
Sbjct: 162 RDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD 221

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
              +++++   G   N  T   LIDG  +   ++ A     E       P++VS++ L+ 
Sbjct: 222 ---VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMS 278

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK G ++ A   F   +   LLPDV +Y IL+ G C AG   EA++  + M  +G+ P
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEP 338

Query: 201 DGLLLSTLADYNLQSSG 217
           D      +  YN+ ++G
Sbjct: 339 D------IVTYNILANG 349


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 119/204 (58%), Gaps = 2/204 (0%)

Query: 7   HLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSIT 64
            + AAL +  ++ +RG + P+  TY T+I G+C + R+DEAV++F E LT  ++KP ++ 
Sbjct: 534 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 593

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +C +G++D A +   +M+E+G    V TY+ L+   F       A+++ EEM 
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              ++P++ +Y+ILI+G CK G +++AL  F       +   VVTY  LI    K G+  
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L+D  +R GI PD +L + L
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNAL 737



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  +GL PD+ TYN +I G+C    + +A+++FE ++   ++   +T+T LI 
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+G++ +   +F + + +G + ++V Y+ LI+ +  S N+  AF++  EM +  I+P
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 764

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+ GLC  G ++EA        +  + PD+VTY  LI GY   G   +A+++ 
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 824

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
           + M+  G  P      TL  YN
Sbjct: 825 NEMMNKGFNP------TLLTYN 840



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 36/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLD------------------ 44
           K   +D A+K+F ++  +G ++P+ + YN +I GYC   +LD                  
Sbjct: 567 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 626

Query: 45  -----------------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                            EA +L E++    L P+  T+ ILI+  CKEG +  A  +F  
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G +A VVTY+ LI    K   ++    +++E     I P++V Y+ LI+     G 
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++ A           + PD VTY  L+RG C  GR  EA +L D M   GI PD +  +T
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 208 L 208
           L
Sbjct: 807 L 807



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 96/175 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KLF +   RG+ PD++ YN +I  + +   +D A ++  ++   ++ P+
Sbjct: 706 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   C  GR+D+A  +  +M E+G + ++VTY+ LI GY    ++K A  +  
Sbjct: 766 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 825

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM     +P +++Y+ LI GLCK G  ++A       ++N + PD  TY  LI G
Sbjct: 826 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 3/155 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A ++ G++  + + PD +TYNT++ G C L R+DEA +L +++T   ++P+ +T+ 
Sbjct: 746 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 805

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +  +G + DA  + ++M+ KG    ++TY+ LI G  K+     A ++ +EM EN
Sbjct: 806 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 865

Query: 127 NISPNIVSYSILIDGLC---KRGLMEEALYAFHCA 158
            I+P+  +Y  LI+GL    +R + +E L A   A
Sbjct: 866 GITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 900


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 1/208 (0%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
            L K   +  A +L  ++   G +P++ T+ ++I G C     + A +LF KL      KP
Sbjct: 911  LCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKP 970

Query: 61   NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            N  T+T +I  +CKE ++  A M+F +M E+G   N  TY+ LIDG+ K+ N   A+++ 
Sbjct: 971  NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 1030

Query: 121  EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E M      PN  +Y+ ++DGLCKRG  EEA    +    N +  D VTY ILI   CK 
Sbjct: 1031 ELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKR 1090

Query: 181  GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                +A+   + M + G  PD  L +TL
Sbjct: 1091 ADMNQALVFLNKMFKVGFQPDIHLYTTL 1118



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K  +   A +L   +++ G  P+  TYN+I+ G C   R +EA +L       Q++ + +
Sbjct: 1019 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 1078

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+TILI   CK   M+ A +  +KM + G + ++  Y+ LI  + +   MK +  +++E+
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 1138

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  ++P   +Y+ +I G C+   +  A+  F    D+   PD ++Y  LI G CK  R 
Sbjct: 1139 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 1198

Query: 184  TEAMQLYDSMLRNGIMP 200
             EA QLYD+M+  G+ P
Sbjct: 1199 DEARQLYDTMIDKGLSP 1215



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            ++ +RG   D  T   II  +C  + ++ AV  F K+T + L PN I ++ +I   CK G
Sbjct: 856  EMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 915

Query: 77   RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNISPNIVSY 135
             +  A  +  +M++ G K NV T++ LI G  K    + AF ++ ++   +N  PN+ +Y
Sbjct: 916  SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 975

Query: 136  SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            + +I G CK   +  A   F    +  L+P+  TY  LI G+CKAG  ++A +L + M  
Sbjct: 976  TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035

Query: 196  NGIMPDGLLLSTLAD 210
             G  P+    +++ D
Sbjct: 1036 EGFFPNTCTYNSIVD 1050



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 2    LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K+   + A +LF +L      +P++ TY  +I GYC   +L  A  LFE++    L P
Sbjct: 946  LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 1005

Query: 61   NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            N+ T+T LID  CK G    A  +   M  +G   N  TY+ ++DG  K    + AF + 
Sbjct: 1006 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 1065

Query: 121  EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
                +N I  + V+Y+ILI   CKR  M +AL   +        PD+  Y  LI  +C+ 
Sbjct: 1066 NTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQ 1125

Query: 181  GRPTEAMQLYDSMLRNGIMP 200
                ++ +L+D +++ G+ P
Sbjct: 1126 NMMKDSEKLFDEVIKLGLAP 1145



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 4/209 (1%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            KE  L  A  LF ++ ++GL P+  TY T+I G+C      +A +L E ++     PN+ 
Sbjct: 984  KEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTC 1043

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  ++D  CK GR ++A  + +   +   +A+ VTY+ LI    K  +M  A     +M
Sbjct: 1044 TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 1103

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +    P+I  Y+ LI   C++ +M+++   F   +   L P   TY  +I GYC+  + 
Sbjct: 1104 FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKV 1163

Query: 184  TEAMQLYDSMLRNGIMPD----GLLLSTL 208
            + A++ +  M  +G  PD    G L+S L
Sbjct: 1164 SLAVKFFQKMSDHGCAPDSISYGALISGL 1192



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 94/192 (48%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K    + A KL        +E D +TY  +I   C    +++A+    K+  V  +P+
Sbjct: 1052 LCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPD 1111

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               +T LI AFC++  M D+  +F ++++ G      TY+ +I GY + + +  A   ++
Sbjct: 1112 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 1171

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +M ++  +P+ +SY  LI GLCK   ++EA   +   +D  L P  VT   L   YCK  
Sbjct: 1172 KMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTE 1231

Query: 182  RPTEAMQLYDSM 193
                AM + + +
Sbjct: 1232 DFASAMVILERL 1243



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 98/189 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +   + ++GL       N II     +  ++ A  +F++++   + P+S T+  
Sbjct: 777 LKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKY 836

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C+ G + +A     +M+E+G   +  T + +I  + +   +  A   + ++ +  
Sbjct: 837 IIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 896

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SPN+++YS +I GLCKRG +++A       + N   P+V T+  LI G CK G    A 
Sbjct: 897 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 956

Query: 188 QLYDSMLRN 196
           +L+  ++R+
Sbjct: 957 RLFLKLIRS 965



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%)

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +F +M  +G   +  TY  +I GY ++ N+  A     EM E     +  + +++I 
Sbjct: 815 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             C++ L+  A++ FH      L P+++ Y+ +I G CK G   +A +L + M++NG  P
Sbjct: 875 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934

Query: 201 D 201
           +
Sbjct: 935 N 935



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            +E  +  A+K F +++D G  PD I+Y  +I G C  +RLDEA QL++ +    L P  +
Sbjct: 1159 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 1218

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEK 91
            T   L   +CK      A ++  ++ +K
Sbjct: 1219 TRVTLTYEYCKTEDFASAMVILERLNKK 1246


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +M+DA  +F +ML  G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++++A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +LF ++ + GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGYVP 414



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + +  + G    +  +N ++  +     +  A  +F+ +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + K G +D+   + + M   G + +V TYS LI+G  K   M+ A ++++
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 231 EMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 291 DLKQAQDLTDEMSMKGLKPDKITYTTLID 319



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +I+   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 115/194 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  L  ++++ G+ PD+ TY  +I G C + R+++A  +FEK+    +KPN++ FTI
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CK+G  +    +  +M E+G + + VTY+ +++G  +++++KSA  +  EM    
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+Y+ LIDG CK   ++ A+      +   +  D VTY  LI G  KAGR  +A 
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 470

Query: 188 QLYDSMLRNGIMPD 201
           ++   M+  G+ PD
Sbjct: 471 RVLGEMMEAGLEPD 484



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +  L+L  ++ +RG+ PD +TYN I+ G C    L  A  +  ++    L+P+++
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID +CKE  +D A  +   M+ +G   + VTY+ LI G  K+     A  V  EM
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+++ID  C++G ++  L       +    P VVTY +++ G+CK G+ 
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L ++M+  G+ PD +  + L D
Sbjct: 537 KNADMLLNAMINIGVSPDDITYNILLD 563



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 108/197 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L +A  +F ++  RG+   ++++NT+I G C    LD A  L  +++   + P+
Sbjct: 250 LVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPD 309

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C+ GR++DA  +F KM  +G K N V ++ LID + K  + ++  +++ 
Sbjct: 310 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHR 369

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + P+ V+Y+ +++GLC+   ++ A           L PD VTY  LI GYCK  
Sbjct: 370 EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEE 429

Query: 182 RPTEAMQLYDSMLRNGI 198
               AM++  +M+  G+
Sbjct: 430 ELDMAMEIKQNMVAEGV 446



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 108/194 (55%), Gaps = 3/194 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A  +  ++   GL PD +TY T+I GYC    LD A+++ + +    +  + +T+T 
Sbjct: 396 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 455

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K GR  DA  +  +M+E G + +  TY+ +ID + +  ++K+   + +EM    
Sbjct: 456 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 515

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P +V+Y+++++G CK G M+ A    +  ++  + PD +TY IL+ G+CK G+ T+  
Sbjct: 516 RKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIE 575

Query: 188 QLYDSMLRNGIMPD 201
           +L  +    G +PD
Sbjct: 576 ELKSA---KGTVPD 586



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 95/194 (48%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           QL D GL P+   +N ++     L  L  A  +F+++    ++   ++F  +I   C+ G
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A  +  +M E G   +V TY  LI G  +   ++ A  V+E+MC   + PN V ++
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ILID  CK+G  E  L       +  + PD VTY  ++ G C+A     A  +   M   
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409

Query: 197 GIMPDGLLLSTLAD 210
           G+ PD +  +TL D
Sbjct: 410 GLRPDTVTYTTLID 423



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 83/143 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+++   +   G+  D +TY  +I G     R  +A ++  ++    L+P++ 
Sbjct: 427 KEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNT 486

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++IDAFC++G +     +  +M  KG K  VVTY+ +++G+ K   MK+A  +   M
Sbjct: 487 TYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 546

Query: 124 CENNISPNIVSYSILIDGLCKRG 146
               +SP+ ++Y+IL+DG CK G
Sbjct: 547 INIGVSPDDITYNILLDGHCKHG 569



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 81/159 (50%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           EA   + +L    L P +  F +L+    + G +  A  +F +M  +G +  VV+++ +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  ++ ++  A  ++  M E  ++P++ +Y  LI GLC+ G +E+A   F       + 
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           P+ V + ILI  +CK G     ++L+  M   G+ PD +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAV 381



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           ++L+P S T   L+  F       +A   + ++L+ G       ++ L+    +   + S
Sbjct: 204 IRLEPTSCTG--LMSRFPTA---PEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELAS 258

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A +V++EM    +   +VS++ +I G+C+ G ++ A        +  + PDV TY  LI+
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 318

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           G C+ GR  +A  +++ M   G+ P+ ++ + L D + +   ++
Sbjct: 319 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 124/214 (57%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+ ++  NG++PD    S +A+ NL   G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE-NLIEQG 703



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTC 55
           +LI  C     LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T 
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNM 113
           +   PN  ++ IL+   C E R  +A  +   M + G     +VV+Y+ +I+G+FK  ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A+  Y EM +  I PN+V+YS +I  LCK   M++A+      + N ++P+  TY  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           + GYC +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD +TY T+I   C   R+++A++ FE++   +L P +I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI + C   + D A  +  +ML++G   + + ++ +ID + K   +  +  +++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++YS LIDG C  G M+EA       +   + PD VTY  LI GYCK  R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 566 EDALVLFREMESSGVSPD 583



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+  TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  MF  M ++G K  + TY  L+ GY     +     + +
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SILI    K+G +++A+  F       L PD VTY  +I   CK+G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+   + P  ++ ++L
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSL 450



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + PN
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F+ILI A+ K+G++D A ++FSKM ++G   + VTY  +I    KS  ++ A   +E
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  +SP  + Y+ LI  LC     ++A       LD  +  D + +  +I  +CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E+ +L+D M+R G+ PD +  STL D
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLID 522



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL+L   + D G +  PD+++Y T+I G+     LD+A   + ++    + PN +T++ +
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A CK   MD A  + + M++ G   N  TY+ ++ GY  S   K A    ++M  + +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ L+D LCK G   EA   F       L P++ TY  L++GY   G   E   
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L D M+RNGI P+  + S L
Sbjct: 361 LLDLMVRNGIHPNHYVFSIL 380



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 110/197 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A++ F Q+ D  L P  I YN++I   C  ++ D+A +L  ++    +  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  + 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  +  +G
Sbjct: 598 RRTAAAKELYVGITESG 614



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+++A+ LF ++    + P+ IT+ I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++  + E G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+PDV TY+++     + G   E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+ SM  NG   +  +L+++    LQ
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQ 736



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 46/234 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-----FEKLTCVQLKPNSITF 65
           A  +F +L  RG    I   N   C    + R   A  +       +    ++ PN  T+
Sbjct: 38  ARHVFDELLRRGRGASIYGLN---CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY----- 120
            ILI + C  GR+D        +++KG + + + ++ L+ G    +    A D+      
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 121 ---------------EEMCENNIS------------------PNIVSYSILIDGLCKRGL 147
                          + +C+ N S                  P++VSY+ +I+G  K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +++A   +H  LD  +LP+VVTY+ +I   CKA    +AM++  SM++NG+MP+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T+ G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GR D+A  +F+ +   G   +V TYS + +   +   ++   D++  M EN  +
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            N    + ++  L +RG +  A
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRA 743



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVSY 135
           +DA  +F ++L +G  A++   +C +    +  +  +A   Y  M     + ++PN+ +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSML 194
            ILI   C  G ++    A    +      D + +  L++G C   R ++AM +    M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 195 RNGIMPD----GLLLSTLADYN 212
           + G +P+     +LL  L D N
Sbjct: 155 QLGCIPNVFSYNILLKGLCDEN 176



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L    L+ +  T+N +I     + R DEA  LF  L+   L P+  T++++
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +   ++G +++   +F  M E G  AN    + ++    +  ++  A      + E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 129 SPNIVSYSILID 140
           S    + S+ +D
Sbjct: 756 SLEASTASLFLD 767


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 118/206 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  A K+F ++T R L+P ++++NT+I GYC +  LDE  +L  ++   + +P+  
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+A CKE +MD A  +F +M ++G   N V ++ LI G+ ++  +    + Y++M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+IV Y+ L++G CK G +  A       +   L PD +TY  LI G+C+ G  
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             A+++   M +NGI  D +  S L 
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALV 457



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 117/220 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +D   + + ++  +GL+PDI+ YNT++ G+C    L  A  + + +    L+P+ I
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID FC+ G ++ A  +  +M + G + + V +S L+ G  K   +  A     EM
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+ V+Y++++D  CK+G  +           +  +P VVTY +L+ G CK G+ 
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A  L D+ML  G++PD +  +TL + + + + S +  I
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI 576



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 106/197 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ D G   ++  +N ++  +C    + +A ++F+++T   L+P  ++F  LI+ +C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D+   +  +M +   + +V TYS LI+   K   M  A  +++EMC+  + PN V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ LI G  + G ++    ++   L   L PD+V Y  L+ G+CK G    A  + D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 194 LRNGIMPDGLLLSTLAD 210
           +R G+ PD +  +TL D
Sbjct: 407 IRRGLRPDKITYTTLID 423



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 110/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++  RGL P+ + + T+I G+     +D   + ++K+    L+P+
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  L++ FCK G +  A  +   M+ +G + + +TY+ LIDG+ +  ++++A ++ +
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N I  + V +S L+ G+CK G + +A  A    L   + PD VTY +++  +CK G
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  +G +P
Sbjct: 500 DAQTGFKLLKEMQSDGHVP 518



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A +   ++   G++PD +TY  ++  +C         +L +++      P+ +
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L++  CK G+M +A M+   ML  G   + +TY+ L++G+ +  N       Y + 
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR---YIQK 578

Query: 124 CENNISPNIVSYSILIDGL 142
            E  I  ++ SY  +++ L
Sbjct: 579 PEIGIVADLASYKSIVNEL 597


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 124/214 (57%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+ ++  NG++PD    S +A+ NL   G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE-NLIEQG 703



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD +TY T+I   C   R+++A++ FE++   +L P +I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI + C   + D A  +  +ML++G   + + ++ +ID + K   +  +  +++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++YS LIDG C  G M+EA       +   + PD VTY  LI GYCK  R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 566 EDALVLFREMESSGVSPD 583



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+  TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  MF  M ++G K  + TY  L+ GY     +     + +
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SILI    K+G +++A+  F       L PD VTY  +I   CK+G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+   + P  ++ ++L
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSL 450



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + PN
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F+ILI A+ K+G++D A ++FSKM ++G   + VTY  +I    KS  ++ A   +E
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  +SP  + Y+ LI  LC     ++A       LD  +  D + +  +I  +CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E+ +L+D M+R G+ PD +  STL D
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLID 522



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T +   PN  ++
Sbjct: 106 RLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            IL+   C + R  +A  +   M + G     +VV+Y+ +I+G+FK  ++  A+  Y EM
Sbjct: 166 NILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I PN+V+YS +I  LCK   M++A+      + N ++P+  TY  ++ GYC +G+P
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            EA+     M  +G+ PD +  ++L DY
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDY 313



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL+L   + D G +  PD+++Y T+I G+     LD+A   + ++    + PN +T++ +
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A CK   MD A  + + M++ G   N  TY+ ++ GY  S   K A    ++M  + +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ L+D LCK G   EA   F       L P++ TY  L++GY   G   E   
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L D M+RNGI P+  + S L
Sbjct: 361 LLDLMVRNGIHPNHYVFSIL 380



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 110/197 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A++ F Q+ D  L P  I YN++I   C  ++ D+A +L  ++    +  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  + 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  +  +G
Sbjct: 598 RRTAAAKELYVGITESG 614



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+++A+ LF ++    + P+ IT+ I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++  + E G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+PDV TY+++     + G   E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+ SM  NG   +  +L+++    LQ
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQ 736



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 46/234 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-----FEKLTCVQLKPNSITF 65
           A  +F +L  RG    I   N   C    + R   A  +       +    ++ PN  T+
Sbjct: 38  ARHVFDELLRRGRGASIYGLN---CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY----- 120
            IL+ + C  GR+D        +++KG   + + ++ ++ G    +    A D+      
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 121 ---------------EEMCENNIS------------------PNIVSYSILIDGLCKRGL 147
                          + +C++N S                  P++VSY+ +I+G  K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +++A   +H  LD  +LP+VVTY+ +I   CKA    +AM++  SM++NG+MP+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T+ G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GR D+A  +F+ +   G   +V TYS + +   +   ++   D++  M EN  +
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            N    + ++  L +RG +  A
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRA 743



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVSY 135
           +DA  +F ++L +G  A++   +C +    +  +  +A   Y  M     + ++PN+ +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSML 194
            IL+   C  G ++    A    +    + D + +  +++G C   R ++AM +    M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 195 RNGIMPD----GLLLSTLADYN 212
           + G +P+     +LL  L D N
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDN 176



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L    L+ +  T+N +I     + R DEA  LF  L+   L P+  T++++
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +   ++G +++   +F  M E G  AN    + ++    +  ++  A      + E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 129 SPNIVSYSILID 140
           S    + S+ +D
Sbjct: 756 SLEASTASLFLD 767


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 112/195 (57%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
             G++   G EPD++T+ +++ GYC  NR+++A+ LF+++  +  KPN +T+T LI   C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   ++ A  +F++M   G + NVVTY+ L+ G  +      A  +  +M +  I PN++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LID   K G + EA   ++  +   + PDV TY  LI G C  G   EA Q++  M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 194 LRNGIMPDGLLLSTL 208
            RNG  P+ ++ +TL
Sbjct: 320 ERNGCYPNEVIYTTL 334



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   ++ A+ LF Q+   G +P+++TY T+I   C    L+ AV+LF ++     +PN 
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  L+   C+ GR  DA  +   M+++  + NV+T++ LID + K   +  A ++Y  
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M + ++ P++ +Y  LI+GLC  GL++EA   F+    N   P+ V Y  LI G+CK+ R
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + M+++  M + G++ + +  + L
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVL 369



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL+ A++LF Q+   G  P+++TYN ++ G C + R  +A  L   +   +++PN
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITFT LIDAF K G++ +A  +++ M++     +V TY  LI+G      +  A  ++ 
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N   PN V Y+ LI G CK   +E+ +  F+      ++ + +TY +LI+GYC  G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           RP  A ++++ M      PD    + L D
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   L  A +L+  +    + PD+ TY ++I G C    LDEA Q+F  +      PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI  FCK  R++D   +F +M +KG  AN +TY+ LI GY        A +V+ 
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      P+I +Y++L+DGLC  G +E+AL  F       +  ++VTY I+I+G CK G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A  L+ S+   G+ P+ +  +T+
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTM 474



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 113/194 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A ++F  +   G  P+ + Y T+I G+C   R+++ +++F +++   +  N+IT+T+
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C  GR D A  +F++M  +    ++ TY+ L+DG   +  ++ A  ++E M +  
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NIV+Y+I+I G+CK G +E+A   F       + P+V+TY  +I G+C+ G   EA 
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488

Query: 188 QLYDSMLRNGIMPD 201
            L+  M  +G +P+
Sbjct: 489 SLFKKMKEDGFLPN 502



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 4/215 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  + LF Q+   G+ P + T N ++   C  ++   A     K+  +  +P+ +TFT L
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++ +C   R++DA  +F ++L  G K NVVTY+ LI    K++++  A +++ +M  N  
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+Y+ L+ GLC+ G   +A +     +   + P+V+T+  LI  + K G+  EA +
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279

Query: 189 LYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 219
           LY+ M++  + PD    G L++ L  Y L     Q
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 97/167 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +K+F +++ +G+  + ITY  +I GYC + R D A ++F +++  +  P+  
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+D  C  G+++ A M+F  M ++    N+VTY+ +I G  K   ++ AFD++  +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
               + PN+++Y+ +I G C+RGL+ EA   F    ++  LP+   Y
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 103/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + AL LF ++      P II +  ++     +NR D  + LFE++  + + P   T  
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++   C   +   A+    KM++ G + ++VT++ L++GY     ++ A  +++++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+Y+ LI  LCK   +  A+  F+    N   P+VVTY  L+ G C+ GR  +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M++  I P+ +  + L D
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALID 266


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 11/217 (5%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE     A +L+ ++  RG+ P+ ITYN++I G+C  NRLD A  +F  +      P+ 
Sbjct: 330 VKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF  LID +C   R+DD T +  +M E G  A+  TY+ LI G+    ++ +A D+ ++
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA------LD-----NHLLPDVVTYA 171
           M  + + P+IV+ + L+DGLC  G +++AL  F         LD     N + PDV TY 
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ILI G    G+  EA +LY  M   GI+P+ +  S++
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSM 546



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 11/213 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D   +L  ++T+ GL  D  TYNT+I G+C +  L+ A+ L +++    + P+ +T  
Sbjct: 404 RIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 463

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-----------GPKANVVTYSCLIDGYFKSQNMKS 115
            L+D  C  G++ DA  MF  M +            G + +V TY+ LI G         
Sbjct: 464 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLE 523

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A ++Y+EM    I PN ++YS +I+GLCK+  ++EA   F         PDVVT+  L+ 
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCKAGR  + ++L+  M R GI+ D +   TL
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 117/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A  L+ ++ ++G+ PD+ TYN +I G+CS  R  EA +L +++   ++ PN
Sbjct: 259 LWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPN 318

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+A+ KE +  +A  ++ +ML +G   N +TY+ +IDG+ K   + +A  ++ 
Sbjct: 319 VVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFY 378

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     SP++ +++ LIDG C    +++     H   +  L+ D  TY  LI G+C  G
Sbjct: 379 VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVG 438

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A+ L   M+ +G+ PD +  +TL D
Sbjct: 439 DLNAALDLSQQMISSGVCPDIVTCNTLLD 467



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L +E  +  A+ L  ++ + GL+P+ ITY TI+ G C +     A+ L  K+  +  +KP
Sbjct: 188 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP 247

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + ++ +ID   K+GR  DA  ++++M EKG   ++ TY+C+IDG+  S     A  + 
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  I+PN+V+YS LI+   K     EA   +   L   ++P+ +TY  +I G+CK 
Sbjct: 308 QEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQ 367

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R   A  ++  M   G  PD    +TL D
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLID 397



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 115/212 (54%), Gaps = 11/212 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--------- 58
           L+AAL L  Q+   G+ PDI+T NT++ G C   +L +A+++F+ +   ++         
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499

Query: 59  --KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
             +P+  T+ ILI     EG+  +A  ++ +M  +G   N +TYS +I+G  K   +  A
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +++ M   + SP++V+++ L+ G CK G +++ L  F       ++ D +TY  LI G
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + K G    A+ ++  M+ +G+ PD + + ++
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSM 651



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 88/151 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ P+ ITY+++I G C  +RLDEA Q+F+ +      P+
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  L+  +CK GR+DD   +F +M  +G  A+ +TY  LI G+ K  N+  A D+++
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQ 634

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++  L  +  ++ A+
Sbjct: 635 EMISSGVYPDTITIRSMLTVLWSKEELKRAV 665



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 106/204 (51%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ LF  +      P +I +N ++     + R D  + L++K+   Q+  +  +F I
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC   ++  A   F K+ + G + +VVT+S L+ G      +  A D++ +MC   
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-- 175

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      +++ L P+ +TY  ++ G CK G    A+
Sbjct: 176 --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I P+ ++ S + D
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIID 257



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 4/175 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  L++A+ LF  +   +  P+ I F  L+    +  R D    ++ KM  K    
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +V +++ LI  +     +  A   + ++ +    P++V++S L+ GLC    + EAL  F
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        P+VVT+  L+ G C+ GR  EA+ L D M+ +G+ P+ +   T+ D
Sbjct: 171 H----QMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 221



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 68/122 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   PD++T+NT++ GYC   R+D+ ++LF ++    +  +
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K G ++ A  +F +M+  G   + +T   ++   +  + +K A  + E
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLE 669

Query: 122 EM 123
           ++
Sbjct: 670 DL 671


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 110/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +G  PD+I YN ++ G C L  L+EA +L +K+    + P+ +T+T +I 
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + GR+     +F +ML KG   +VVTY+ LI G+     ++ AF  + EM E  I P
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LI+GLCK   M++A   F   ++  + P+  +Y ILI   C  G   EA+ LY
Sbjct: 618 NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLY 677

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  G+ PD    S L
Sbjct: 678 KQMLDRGVQPDSCTHSAL 695



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A++++  + + G++P I+TYNT++  YC   ++ + + L  ++      PN +T+ +
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+   K+G  + A  +  +ML+ G K +  TY+ LI GYF    +  A  + EEM    
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP + +Y+  I GLCK G M +A+      L N+LLPDVV+Y  LI GYC+ G   +A 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+D +    + P  +  +TL D
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLD 417



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 109/206 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   + A  L G++   GL+    TYN +I GY +   L EA+ L E++      P 
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPT 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I   CK GRM DA    S ML      +VV+Y+ LI GY +  N+  AF +++
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P IV+Y+ L+DGLC++G +E A       ++  + PD+VTY IL+ G CK G
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLST 207
             + A + +D ML  G+  D    +T
Sbjct: 459 SLSMAQEFFDEMLHEGLELDSYAYAT 484



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A + F ++   GLE D   Y T I G   L     A  L E++      P+ I
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + +++D  CK G +++A+ +  KM+  G   + VTY+ +I  + ++  ++   +++ EM
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P++V+Y++LI G   +G +E A   F    +  +LP+V+TY  LI G CK  R 
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM 635

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A   +  M+  GI P+    + L + N      QE
Sbjct: 636 DQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  A  LF +L    L P I+TYNT++ G C    L+ A QL  ++    + P+ +T+T
Sbjct: 389 NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYT 448

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL++  CK G +  A   F +ML +G + +   Y+  I G  K  +   AF + EEM   
Sbjct: 449 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+++ Y++++DGLCK G +EEA       + + ++PD VTY  +I  + + GR  + 
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +++  ML  G+ P  +  + L
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVL 590



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 101/174 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A +L  ++   G+ PD +TY +II  +    RL +  ++F ++    L P+
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPS 583

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LI     +GR++ A + FS+M EKG   NV+TY+ LI+G  K + M  A++ + 
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           EM E  I PN  SY+ILI+  C  G  +EAL  +   LD  + PD  T++ L++
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LI  Y K   ++    V+++M ++ +SP++ + + ++  L  + LM +A+  +    +  
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + P +VTY  L+  YCK G+  + + L   M R G  P+ +  + L +  L   G  E  
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN-GLSKKGEFEQA 288


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 108/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  + +F Q+ D   +PD+ITYN +I  +C   R+ +A +   ++    LKPN +T++ 
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            IDAFCKEG + +A   F  M       N  TY+ LID   K+ N+  A  + EE+ +  
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  N+V+Y+ L+DGLC+ G M+EA   F   L+  + P+  TY  L+ G+ KA     A 
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 485

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   M    I PD LL  T+
Sbjct: 486 DILKEMKEKCIKPDLLLYGTI 506



 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ A  LF Q+ + G  PDI+TYN++I G+  L  LDE + +FE++      P+
Sbjct: 265 LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+ FCK  RM  A     +M   G K NVVTYS  ID + K   ++ A   + 
Sbjct: 325 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PN  +Y+ LID  CK G + EAL      L   +  +VVTY  L+ G C+ G
Sbjct: 385 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 444

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +++ +ML  G+ P+
Sbjct: 445 RMKEAEEVFRAMLNAGVAPN 464



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 35/252 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  ALKL  ++   G++ +++TY  ++ G C   R+ EA ++F  +    + PN  
Sbjct: 407 KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 466

Query: 64  TFTILIDAF-----------------------------------CKEGRMDDATMMFSKM 88
           T+T L+  F                                   C E R+++A ++  ++
Sbjct: 467 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 526

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E G   N V Y+ L+D YFKS     A  + EEM +  +    V+Y  LIDGLCK GL+
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA++ F    +  L P+V  Y  L+ G CK      A +L+D ML  G+MPD +  + L
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646

Query: 209 ADYNLQSSGSQE 220
            D N++    QE
Sbjct: 647 IDGNMKHGNLQE 658



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 115/217 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A+K F  +    L P+  TY ++I   C    L EA++L E++    +K N +
Sbjct: 372 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 431

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D  C+EGRM +A  +F  ML  G   N  TY+ L+ G+ K++ M+ A D+ +EM
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+++ Y  ++ GLC    +EEA        ++ +  + V Y  L+  Y K+G+ 
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           TEA+ L + ML  G++   +    L D   +S   QE
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQE 588



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 115/217 (52%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IK   ++ A  +  ++ ++ ++PD++ Y TI+ G C+ +RL+EA  L  ++    +  N
Sbjct: 475 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 534

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +T L+DA+ K G+  +A  +  +ML+ G  A  VTY  LIDG  KS  ++ A   + 
Sbjct: 535 AVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFG 594

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + PN+  Y+ L+DGLCK    E A   F   LD  ++PD + Y  LI G  K G
Sbjct: 595 RMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 654

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
              EA+ L D M+  G+  D L   T   + L  SG 
Sbjct: 655 NLQEALNLRDRMIEIGMELD-LHAYTALIWGLSHSGQ 690



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L+ A  L G++ + G+  + + Y T++  Y    +  EA+ L E++  + L   
Sbjct: 510 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G + +A   F +M E G + NV  Y+ L+DG  K+   + A  +++
Sbjct: 570 EVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFD 629

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + P+ ++Y+ LIDG  K G ++EAL      ++  +  D+  Y  LI G   +G
Sbjct: 630 EMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSG 689

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A  L D M+  G++PD
Sbjct: 690 QVQKARNLLDEMIGKGVLPD 709



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 115/219 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+   L+ A + F ++    + P   + N ++     + R D + + F+ +    +K +
Sbjct: 195 LIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRS 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+ID  CKEG ++ A  +F++M E G   ++VTY+ LIDG+ K   +     ++E
Sbjct: 255 VFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +  P++++Y+ LI+  CK   M +A    H    N L P+VVTY+  I  +CK G
Sbjct: 315 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 374

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              EA++ +  M R  + P+    ++L D N ++    E
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAE 413



 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 102/189 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ D GL    +TY  +I G C    + EA+  F +++ + L+PN   +T L+D
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    + A  +F +ML+KG   + + Y+ LIDG  K  N++ A ++ + M E  +  
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ LI GL   G +++A       +   +LPD V Y  LI+ Y   G+  EA++L 
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733

Query: 191 DSMLRNGIM 199
           + M + G++
Sbjct: 734 NEMAKRGMI 742



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 92/186 (49%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +      L  L+EA + F K+   ++ P   +   L+    K GR D +   
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M   G K +V TY+ +ID   K  +++ A  ++ +M E   +P+IV+Y+ LIDG  K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL++E +  F    D    PDV+TY  LI  +CK  R  +A +    M  NG+ P+ + 
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 205 LSTLAD 210
            ST  D
Sbjct: 363 YSTFID 368



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 8/176 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+  FG++++ GL+P++  Y  ++ G C  N  + A +LF+++    + P+
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T LID   K G + +A  +  +M+E G + ++  Y+ LI G   S  ++ A ++ +
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 699

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL--------YAFHCALDNHLLPDVVT 169
           EM    + P+ V Y  LI      G ++EAL              L +H +P V T
Sbjct: 700 EMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVPSVQT 755


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 106/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            L+ F ++   G  P +IT N ++ G   LN  D   +++E++    + PN  TF IL  
Sbjct: 207 GLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTH 266

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G          KM E+G   ++VTY+ LI+ Y +   +  AF +Y+ M    + P
Sbjct: 267 VLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVP 326

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++VSY+ L++GLCK G + EA   FH  +   L PD+VTY  LI GYCK G+  E+  L 
Sbjct: 327 DLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLL 386

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+ NGI PD      L +
Sbjct: 387 HDMIWNGISPDSFTCWVLVE 406



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 12/195 (6%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K   ++ + G +PDI+TYNT+I  YC   RLD+A  L++ +    + P+ +++T L++  
Sbjct: 279 KFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGL 338

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CKEGR+ +A  +F +M+ +G   ++VTY+ LI GY K   M+ +  +  +M  N ISP+ 
Sbjct: 339 CKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDS 398

Query: 133 VSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  +L++G  K G    A      L  F  ++   +      Y+ LI   C+  RP  A
Sbjct: 399 FTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI------YSYLIVALCRENRPFAA 452

Query: 187 MQLYDSMLRNGIMPD 201
             L + M ++G  P+
Sbjct: 453 KNLLERMSKDGHKPE 467



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 107/197 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  + D   +++ ++   G+ P++ T+N +    C      +  +  EK+      P+
Sbjct: 233 LLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPD 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+++C++GR+DDA  ++  M  +G   ++V+Y+ L++G  K   ++ A  ++ 
Sbjct: 293 IVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFH 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    +SP+IV+Y+ LI G CK G M+E+    H  + N + PD  T  +L+ GY K G
Sbjct: 353 RMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEG 412

Query: 182 RPTEAMQLYDSMLRNGI 198
           +   A+ L   + R G+
Sbjct: 413 KFLSALNLVVELQRFGV 429



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 92/183 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D + ++ ++  Y  + R+ E ++ F ++  V   P  IT   L++   K    D    ++
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M   G   N+ T++ L     K  +        E+M E    P+IV+Y+ LI+  C++
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +++A Y +       ++PD+V+Y  L+ G CK GR  EA QL+  M+  G+ PD +  
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366

Query: 206 STL 208
           +TL
Sbjct: 367 NTL 369



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 99/200 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A +LF ++  RGL PDI+TYNT+I GYC   ++ E+  L   +    + P+
Sbjct: 338 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 397

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T  +L++ + KEG+   A  +  ++   G   +   YS LI    +     +A ++ E
Sbjct: 398 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLE 457

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++   P +  Y+ LI   C+   + EAL      +D  + P++ TY  +I    +  
Sbjct: 458 RMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLS 517

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  E   L   M+ +G++PD
Sbjct: 518 RSMEGESLVGEMVASGMLPD 537



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 90/206 (43%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE    +AL L  +L   G+      Y+ +I   C  NR   A  L E+++    KP   
Sbjct: 410 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELE 469

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI +FC+   + +A ++  +M++K  K N+ TY  +I    +         +  EM
Sbjct: 470 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEM 529

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P++     L  G C+   +++A            + D  ++  LIR     G  
Sbjct: 530 VASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDI 589

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             ++++ D ML+ G++P+ L  +  A
Sbjct: 590 ARSLEIQDMMLKMGLLPNPLTCNPFA 615



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 10/207 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E    AA  L  +++  G +P++  YN +I  +C  + + EA+ L  ++   ++KPN
Sbjct: 443 LCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 502

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I    +  R  +   +  +M+  G   ++     L  GY +  ++  A  +  
Sbjct: 503 LATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLS 562

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT---YAIL---IR 175
              +     +  S++ LI     +G +  +L      L   LLP+ +T   +AIL   +R
Sbjct: 563 FFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCNPFAILTSRLR 622

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDG 202
              KA      M ++D M  + +  D 
Sbjct: 623 VDVKAAN----MAIFDGMNASSLWGDN 645


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++DEA +LF ++    L PN 
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ ++L +G   +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 SVDAEKMLRGMLSVGLKPD 380



 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD+A  +F++ML+ G   N VT++ LIDG+ K+  +  A ++Y+++
Sbjct: 208 TYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQL 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 111/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A++++++L      P+
Sbjct: 216 LCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  K  K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVKTGSKLLKEMXRDGHVP 414



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 107/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L+  + + G +D+   + S M   G + +V TYS LI+G  K   M  A +++ 
Sbjct: 171 VVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFN 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N + PN V+++ LIDG CK G ++ A+  +   L     PD++TY  LI G CK G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M    + PD +  +TL D
Sbjct: 291 DLKQARDLIDEMSMKELKPDKITYTTLID 319



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ + L+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M   ML  G K +  TY+ +I+ + K  ++K+   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMXRDGHVPCVVT 418



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   F    E        T   +++   K +  K  +  Y+E+ 
Sbjct: 69  FSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL----- 164
           E     ++  ++IL+   CK G M  A               + +F+  +  ++      
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLD 188

Query: 165 ---------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  EA +L++ ML NG++P+G+  +TL 
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 121/205 (59%), Gaps = 1/205 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-SLNRLDEAVQLFEKLTCVQLK 59
           +L++E H+  A+  + ++ + G+   +++ N +I   C +   +D A+++F+++     +
Sbjct: 129 ILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQ 188

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+S T+  LI+  C+ G + +A  +F +M +KG  A+VVTY+ LI G  +S N+  A  +
Sbjct: 189 PDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGL 248

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EEM  N+I PN+ +YS L+DGLCK G   +A+         H LP++VTY+ LI G CK
Sbjct: 249 LEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCK 308

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLL 204
             +  EA+++ D M   G+ P+  L
Sbjct: 309 ERKLREAVEILDRMRIQGLKPNAGL 333



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 7/194 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A +LF ++  +G    ++TY ++I G C  N LDEA+ L E++    ++PN  T++
Sbjct: 206 NISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYS 265

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK G    A  +   M +K    N+VTYS LI+G  K + ++ A ++ + M   
Sbjct: 266 SLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQ 325

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR-------GYCK 179
            + PN   Y  +I GLC  G  +EA       +   + P+  ++++ +R       G C 
Sbjct: 326 GLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCN 385

Query: 180 AGRPTEAMQLYDSM 193
              P  A QLY SM
Sbjct: 386 NVDPPRAFQLYLSM 399



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 1/180 (0%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +I  GY  ++R  +A+++F K+   QL+P    +  ++D   +E  +  A   + +M E 
Sbjct: 90  SICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMREL 149

Query: 92  GPKANVVTYSCLIDGYFKS-QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           G  ++VV+ + LI    K+ + + SA  +++EM      P+  +Y  LI+GLC+ G + E
Sbjct: 150 GIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISE 209

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A   F           VVTY  LI G C++    EA+ L + M RN I P+    S+L D
Sbjct: 210 AKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMD 269



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 7/202 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A+ L  ++    +EP++ TY++++ G C      +A+QL E +      PN +T++
Sbjct: 241 NLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYS 300

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CKE ++ +A  +  +M  +G K N   Y  +I G   + + + A +  +EM   
Sbjct: 301 TLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLG 360

Query: 127 NISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            ISPN  S+S+       ++ GLC       A   +       +  ++ T+  L++ +CK
Sbjct: 361 GISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCK 420

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G   +A ++ + M+ +G +PD
Sbjct: 421 RGDLHKAARILEEMVLDGCIPD 442



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 42/192 (21%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H   A++L   +  +   P+++TY+T+I G C   +L EAV++ +++    LKPN
Sbjct: 271 LCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPN 330

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG----------------------------P 93
           +  +  +I   C  G   +A     +M+  G                            P
Sbjct: 331 AGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPP 390

Query: 94  KA--------------NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A               + T+ CL+  + K  ++  A  + EEM  +   P+   ++++I
Sbjct: 391 RAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVI 450

Query: 140 DGLCKRGLMEEA 151
            GL  R  + EA
Sbjct: 451 GGLWDRKKVREA 462



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 4/190 (2%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCV---QLKPNSITFTILIDAFCKEGRMDDA 81
           P  IT + ++    +   + +AV +F+  T       + +  TF ++I       +   A
Sbjct: 10  PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             M  +M ++        +  +  GY +      A  V+ +M    + P   +Y  ++D 
Sbjct: 70  EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE-AMQLYDSMLRNGIMP 200
           L +   ++ A+  +    +  +   VV+  ILI+  CK     + A++++  M   G  P
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQP 189

Query: 201 DGLLLSTLAD 210
           D     TL +
Sbjct: 190 DSYTYGTLIN 199


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 106/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            L+ F ++   G  P +IT N ++ G   LN  D   +++E++    + PN  TF IL  
Sbjct: 252 GLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTH 311

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G          KM E+G   ++VTY+ LI+ Y +   +  AF +Y+ M    + P
Sbjct: 312 VLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVP 371

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++VSY+ L++GLCK G + EA   FH  +   L PD+VTY  LI GYCK G+  E+  L 
Sbjct: 372 DLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLL 431

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+ NGI PD      L +
Sbjct: 432 HDMIWNGISPDSFTCWVLVE 451



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 107/197 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  + D   +++ ++   G+ P++ T+N +    C      +  +  EK+      P+
Sbjct: 278 LLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPD 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+++C++GR+DDA  ++  M  +G   ++V+Y+ L++G  K   ++ A  ++ 
Sbjct: 338 IVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFH 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    +SP+IV+Y+ LI G CK G M+E+    H  + N + PD  T  +L+ GY K G
Sbjct: 398 RMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEG 457

Query: 182 RPTEAMQLYDSMLRNGI 198
           +   A+ L   + R G+
Sbjct: 458 KFLSALNLVVELQRFGV 474



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 103/191 (53%), Gaps = 12/191 (6%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K   ++ + G +PDI+TYNT+I  YC   RLD+A  L++ +    + P+ +++T L++  
Sbjct: 324 KFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGL 383

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CKEGR+ +A  +F +M+ +G   ++VTY+ LI GY K   M+ +  +  +M  N ISP+ 
Sbjct: 384 CKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDS 443

Query: 133 VSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  +L++G  K G    A      L  F  ++   +      Y+ LI   C+  RP  A
Sbjct: 444 FTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDI------YSYLIVALCRENRPFAA 497

Query: 187 MQLYDSMLRNG 197
             L + M ++G
Sbjct: 498 KNLLERMSQDG 508



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 92/183 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D + ++ ++  Y  + R+ E ++ F ++  V   P  IT   L++   K    D    ++
Sbjct: 232 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 291

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M   G   N+ T++ L     K  +        E+M E    P+IV+Y+ LI+  C++
Sbjct: 292 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 351

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +++A Y +       ++PD+V+Y  L+ G CK GR  EA QL+  M+  G+ PD +  
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 411

Query: 206 STL 208
           +TL
Sbjct: 412 NTL 414



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A +LF ++  RGL PDI+TYNT+I GYC   ++ E+  L   +    + P+
Sbjct: 383 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 442

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T  +L++ + KEG+   A  +  ++   G   +   YS LI    +     +A ++ E
Sbjct: 443 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLE 502

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++     +  Y+ LI   C+   + EAL      +D  + P++ TY  +J    +  
Sbjct: 503 RMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLS 562

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  E   L   M+ +G +PD
Sbjct: 563 RSMEGESLVGEMVASGXLPD 582



 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 86/200 (43%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE    +AL L  +L   G+      Y+ +I   C  NR   A  L E+++    K    
Sbjct: 455 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELE 514

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI +FC+   + +A ++  +M++K  K N+ TY  +J    +         +  EM
Sbjct: 515 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEM 574

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   P++     L  G C+   +++A            + D  ++  LIR     G  
Sbjct: 575 VASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDI 634

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             ++++ D ML+ G++P+ L
Sbjct: 635 ARSLEIQDMMLKMGLLPNPL 654



 Score = 43.1 bits (100), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 80/185 (43%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E    AA  L  +++  G + ++  YN +I  +C  + + EA+ L  ++   ++KPN
Sbjct: 488 LCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 547

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +J    +  R  +   +  +M+  G   ++     L  GY +  ++  A  +  
Sbjct: 548 LATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLS 607

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              +     +  S++ LI     +G +  +L      L   LLP+ +T   +I G  KA 
Sbjct: 608 FXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKAR 667

Query: 182 RPTEA 186
           R   A
Sbjct: 668 RVDSA 672


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 119/204 (58%), Gaps = 2/204 (0%)

Query: 7   HLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSIT 64
            + AAL +  ++ +RG + P+  TY T+I G+C + R+DEAV++F E LT  ++KP ++ 
Sbjct: 529 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 588

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +C +G++D A +   +M+E+G    V TY+ L+   F       A+++ EEM 
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              ++P++ +Y+ILI+G CK G +++AL  F       +   VVTY  LI    K G+  
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L+D  +R GI PD +L + L
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNAL 732



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  +GL PD+ TYN +I G+C    + +A+++FE ++   ++   +T+T LI 
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+G++ +   +F + + +G + ++V Y+ LI+ +  S N+  AF++  EM +  I+P
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 759

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+ GLC  G ++EA        +  + PD+VTY  LI GY   G   +A+++ 
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 819

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
           + M+  G  P      TL  YN
Sbjct: 820 NEMMNKGFNP------TLLTYN 835



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 36/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLD------------------ 44
           K   +D A+K+F ++  +G ++P+ + YN +I GYC   +LD                  
Sbjct: 562 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 621

Query: 45  -----------------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
                            EA +L E++    L P+  T+ ILI+  CKEG +  A  +F  
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G +A VVTY+ LI    K   ++    +++E     I P++V Y+ LI+     G 
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           ++ A           + PD VTY  L+RG C  GR  EA +L D M   GI PD +  +T
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 208 L 208
           L
Sbjct: 802 L 802



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 96/175 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KLF +   RG+ PD++ YN +I  + +   +D A ++  ++   ++ P+
Sbjct: 701 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 760

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   C  GR+D+A  +  +M E+G + ++VTY+ LI GY    ++K A  +  
Sbjct: 761 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 820

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM     +P +++Y+ LI GLCK G  ++A       ++N + PD  TY  LI G
Sbjct: 821 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 3/155 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A ++ G++  + + PD +TYNT++ G C L R+DEA +L +++T   ++P+ +T+ 
Sbjct: 741 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 800

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +  +G + DA  + ++M+ KG    ++TY+ LI G  K+     A ++ +EM EN
Sbjct: 801 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 860

Query: 127 NISPNIVSYSILIDGLC---KRGLMEEALYAFHCA 158
            I+P+  +Y  LI+GL    +R + +E L A   A
Sbjct: 861 GITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 895


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 108/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  + +F Q+ D   +PD+ITYN +I  +C   R+ +A +   ++    LKPN +T++ 
Sbjct: 107 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 166

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            IDAFCKEG + +A   F  M       N  TY+ LID   K+ N+  A  + EE+ +  
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  N+V+Y+ L+DGLC+ G M+EA   F   L+  + P+  TY  L+ G+ KA     A 
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   M    I PD LL  T+
Sbjct: 287 DILKEMKEKCIKPDLLLYGTI 307



 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ A  LF Q+ + G  PDI+TYN++I G+  L  LDE + +FE++      P+
Sbjct: 66  LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 125

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+ FCK  RM  A     +M   G K NVVTYS  ID + K   ++ A   + 
Sbjct: 126 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 185

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++PN  +Y+ LID  CK G + EAL      L   +  +VVTY  L+ G C+ G
Sbjct: 186 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 245

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +++ +ML  G+ P+
Sbjct: 246 RMKEAEEVFRAMLNAGVAPN 265



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 23/240 (9%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A+K F  +    L P+  TY ++I   C    L EA++L E++    +K N +
Sbjct: 173 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 232

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+D  C+EGRM +A  +F  ML  G   N  TY+ L+ G+ K++ M+ A D+ +EM
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+++ Y  ++ GLC    +EEA        ++ +  + V Y  L+  Y K+G+ 
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352

Query: 184 TEAM-----------------------QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           TEA+                       +L+D ML  G+MPD +  + L D N++    QE
Sbjct: 353 TEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 112/213 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A + F ++    + P   + N ++     + R D + + F+ +    +K +  T+ I
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CKEG ++ A  +F++M E G   ++VTY+ LIDG+ K   +     ++E+M + +
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y+ LI+  CK   M +A    H    N L P+VVTY+  I  +CK G   EA+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + +  M R  + P+    ++L D N ++    E
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAE 214



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 107/250 (42%), Gaps = 48/250 (19%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  ALKL  ++   G++ +++TY  ++ G C   R+ EA ++F  +    + PN  
Sbjct: 208 KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 267

Query: 64  TFTILIDAF-----------------------------------CKEGRMDDATMMFSKM 88
           T+T L+  F                                   C E R+++A ++  ++
Sbjct: 268 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 327

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E G   N V Y+ L+D YFKS     A  + EEM +            L+DGLCK    
Sbjct: 328 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCF 375

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E A   F   LD  ++PD + Y  LI G  K G   EA+ L D M+  G+  D L   T 
Sbjct: 376 EVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD-LHAYTA 434

Query: 209 ADYNLQSSGS 218
             + L  SG 
Sbjct: 435 LIWGLSHSGQ 444



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 29/237 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IK   ++ A  +  ++ ++ ++PD++ Y TI+ G C+ +RL+EA  L  ++    +  N
Sbjct: 276 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 335

Query: 62  SITFTILIDAFCKEGRMDDA-----------------------TMMFSKMLEKGPKANVV 98
           ++ +T L+DA+ K G+  +A                         +F +ML+KG   + +
Sbjct: 336 AVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 395

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            Y+ LIDG  K  N++ A ++ + M E  +  ++ +Y+ LI GL   G +++A       
Sbjct: 396 AYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 455

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           +   +LPD V Y  LI+ Y   G+  EA++L + M + G      +++ L+D+ + S
Sbjct: 456 IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG------MITGLSDHAVPS 506


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 116/200 (58%), Gaps = 1/200 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L  +LK+F ++ D+ + P++ITYN++I G C+  +++EA+ + +K+    ++PN I
Sbjct: 308 KDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLI 367

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK G M +A  MF  +  +G +     Y+ LID Y K   +   F + EEM
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++ +Y+ LI GLC+ G +E A   F   L N  LPD+VT+ IL+ GYC  G  
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD-QLTNKGLPDLVTFHILMEGYCSRGES 486

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            +A  L   M + G+ P  L
Sbjct: 487 RKAAMLLKEMSKMGLKPRHL 506



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 114/200 (57%), Gaps = 3/200 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L+ ++  R ++P++ T+N +I   C   ++++A  + E +      PN +++  LID +C
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 74  K---EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           K    G+M  A  +  +M+E     N+ T++ LIDG++K  N+  +  V++EM + ++ P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LI+GLC  G + EA+      +   + P+++TY  LI G+CK G   EA+ ++
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           DS+   G  P   + + L D
Sbjct: 390 DSVKGQGTRPTTRMYNMLID 409



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN---RLDEAVQLFEKLTCVQL 58
           L K   ++ A  +   +   G  P++++YNT+I GYC L    ++ +A  + +++   ++
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEV 292

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN  TF ILID F K+  +  +  +F +ML++    NV+TY+ LI+G      +  A  
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIG 352

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + ++M    + PN+++Y  LI+G CK G+M+EAL  F         P    Y +LI  YC
Sbjct: 353 MRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYC 412

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           K G+  +   L + M R GI+PD
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPD 435



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 118/229 (51%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +  ++   G++P++ITY+++I G+C    + EA+ +F+ +     +P +  + +
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNM 406

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA---FD------ 118
           LIDA+CK G++DD   +  +M  +G   +V TY+CLI G  ++ N+++A   FD      
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466

Query: 119 -------------------------VYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL- 152
                                    + +EM +  + P  ++Y+I++ G CK G ++ A  
Sbjct: 467 LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                  +  L  +V +Y +L++GY + G+  +A  L + ML  G++P+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 96/167 (57%), Gaps = 2/167 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D    L  ++   G+ PD+ TYN +I G C    ++ A +LF++LT   L P+ +TF I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHI 475

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
           L++ +C  G    A M+  +M + G K   +TY+ ++ GY K  N+K+A ++  +M  E 
Sbjct: 476 LMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKER 535

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
            +  N+ SY++L+ G  ++G +E+A    +  L+  L+P+ +TY I+
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 93/150 (62%), Gaps = 2/150 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  +++AA KLF QLT++GL PD++T++ ++ GYCS     +A  L ++++ + LKP 
Sbjct: 446 LCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPR 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+ I++  +CKEG +  AT M ++M  E+  + NV +Y+ L+ GY +   ++ A  + 
Sbjct: 505 HLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            EM E  + PN ++Y I+ + +  +G + +
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 38/212 (17%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I  + ++  Y + +R +   + F++      K ++++   L+ A  K+ R  D   ++ +
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKE 213

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG- 146
           M+ +  + NV T++ +I+   K+  M  A DV E+M     SPN+VSY+ LIDG CK G 
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGG 273

Query: 147 ---------LMEE----------------------------ALYAFHCALDNHLLPDVVT 169
                    +++E                            +L  F   LD  ++P+V+T
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           Y  LI G C  G+  EA+ + D M+  G+ P+
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPN 365



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 3/153 (1%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NSI   +L+ A+    R +     F +    G K + ++   L+    K         +Y
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLY 211

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK- 179
           +EM    I PN+ +++++I+ LCK G M +A             P+VV+Y  LI GYCK 
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKL 271

Query: 180 --AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              G+  +A  +   M+ N + P+    + L D
Sbjct: 272 GGNGKMYKADAVLKEMVENEVSPNLTTFNILID 304


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 113/198 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L   + + GLEP+++ YNT+I G C    L+ A+++F  +    +  +++T+  LI 
Sbjct: 704 AVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLIS 763

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  DA  +   M+++    NV+ ++ LID + K  N+  A ++Y+EM   ++ P
Sbjct: 764 GLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHP 823

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ LI+G C +G + +A + F   +     PDVVTY  LI G+CK+ R  + M+L+
Sbjct: 824 NILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 883

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G++ D    +TL
Sbjct: 884 CEMTHQGLVGDAFTYNTL 901



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 117/207 (56%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             +KE +L  A  L+ ++  R + P+I+TYN++I G+C   RL +A  +F+ +      P+
Sbjct: 800  FVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPD 859

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T+  LI  FCK  R++D   +F +M  +G   +  TY+ LI GY ++  +  A  V+ 
Sbjct: 860  VVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 919

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M +  + P+IV+Y+IL+D LC  G +E+AL        N +  D++TY I+I+G C+  
Sbjct: 920  RMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRND 979

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  EA  L+ S+ R G+  D +   T+
Sbjct: 980  KVKEAWCLFRSLTRKGVKLDAIAYITM 1006



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL++F  +  +G+  D +TYNT+I G C+  R  +A +L   +   ++ PN
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I FT LID F KEG + +A  ++ +M+ +    N++TY+ LI+G+     +  A  +++
Sbjct: 790 VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ LI G CK   +E+ +  F       L+ D  TY  LI GYC+AG
Sbjct: 850 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAG 909

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A ++++ M+  G+ PD +  + L D
Sbjct: 910 KLNVAQKVFNRMVDCGVPPDIVTYNILLD 938



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   ++ AL+L  ++  +G L  D++TYNT++ G C      +A ++   +T  ++ P
Sbjct: 180 LCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINP 239

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  TFT LIDAF K+G +D+A  ++ +ML+     N VTY+ LI+G      +  A   +
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF 299

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M      PN+V+Y+ LI+G CK   +E+ +  F       L+ D  TY  LI GYC+ 
Sbjct: 300 DLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQV 359

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+   A  ++  M+  G+ PD
Sbjct: 360 GKLRVAKDIFSWMVSCGVTPD 380



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 109/201 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+ +LD A +L+ Q+    + P+ +TYN++I G C   RL  A + F+ +      PN
Sbjct: 251 FVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPN 310

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK  R++D   +F +M  +G   +  TY+ LI GY +   ++ A D++ 
Sbjct: 311 VVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFS 370

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++P+I+++ IL+ GLC  G +  A+  F+          +V Y I+I G CKA 
Sbjct: 371 WMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKAD 430

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           +  EA +L+  +   G+ PD 
Sbjct: 431 KVEEAWELFCRLPVEGVKPDA 451



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L G++   G +P I+T  +++ G+C  NR  EAV L + +  + L+PN + +  +I+
Sbjct: 669 ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +++A  +F  M +KG  A+ VTY+ LI G   S     A  +  +M +  I P
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP 788

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N++ ++ LID   K G + EA   +   +   + P+++TY  LI G+C  GR  +A  ++
Sbjct: 789 NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M+  G  PD +  +TL
Sbjct: 849 DLMVSKGCFPDVVTYNTL 866



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 36/238 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  AL + G++   G +P I+T+ +++ G+C  NR+ +A  L   +     +PN + + 
Sbjct: 115 RLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYN 174

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKA------------------------------- 95
            LID  CK G ++ A  + ++M +KG  A                               
Sbjct: 175 TLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK 234

Query: 96  -----NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
                +V T++ LID + K  N+  A ++Y++M +++I PN V+Y+ LI+GLC  G +  
Sbjct: 235 RRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYH 294

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A   F         P+VVTY  LI G+CK+ R  + M+L+  M R G++ D    +TL
Sbjct: 295 AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTL 352



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 111/194 (57%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             L  A  +F  +  +G  PD++TYNT+I G+C   R+++ ++LF ++T   L  ++ T+ 
Sbjct: 840  RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYN 899

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             LI  +C+ G+++ A  +F++M++ G   ++VTY+ L+D    +  ++ A  + E++ +N
Sbjct: 900  TLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN 959

Query: 127  NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +  +I++Y+I+I G+C+   ++EA   F       +  D + Y  +I G C+ G   EA
Sbjct: 960  QMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREA 1019

Query: 187  MQLYDSMLRNGIMP 200
             +L   M  +G MP
Sbjct: 1020 DKLCTRMKEDGFMP 1033



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  LF ++      P I+ +  ++     +N+ D  + LF K+  + +  +  +FTI
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC+  R   A  +  KM++ G + ++VT   L++G+ +    + A  + + M E  
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V Y+ +I+GLCK   +  AL  F+      ++ D VTY  LI G C +GR T+A 
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M++  I P+ +  + L D
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALID 798



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 1/187 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++   +T R + PD+ T+  +I  +     LDEA +L++++    + PN++T+  LI+
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR+  A   F  M  KG   NVVTY+ LI+G+ KS+ ++    +++ M    +  
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ LI G C+ G +  A   F   +   + PD++T+ IL+ G C  G    AM  +
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKF 404

Query: 191 DSMLRNG 197
           + M R+G
Sbjct: 405 NDM-RSG 410



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 106/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + LF ++ + G+  D+ ++  +I  +C  +R   A+ L  K+  +  +P+ +T   
Sbjct: 631 FDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGS 690

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ FC+  R  +A  +   M E G + NVV Y+ +I+G  K++++ +A +++  M +  
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  + V+Y+ LI GLC  G   +A       +   + P+V+ +  LI  + K G   EA 
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            LY  M+R  + P+ L  ++L +
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLIN 833



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 85/148 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  +KLF ++T +GL  D  TYNT+I GYC   +L+ A ++F ++    + P+ +
Sbjct: 872  KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ IL+D  C  G+++ A +M   + +     +++TY+ +I G  ++  +K A+ ++  +
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEA 151
                +  + ++Y  +I GLC+ GL  EA
Sbjct: 992  TRKGVKLDAIAYITMISGLCRNGLRREA 1019



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +     + AL LF ++      P ++ +  ++    +L R +  +   +++    +  +
Sbjct: 40  FLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHD 99

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +FTILI  FC+  R+  A  +  KM++ G   ++VT+  L+ G+     +  AF +  
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKA 180
            M ++   PN+V Y+ LID LCK G +  AL   +       L  D+VTY  L+ G C +
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A ++   M +  I PD    + L D
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALID 249



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 77/148 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF ++   GL  D  TYNT+I GYC + +L  A  +F  +    + P+ I
Sbjct: 323 KSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDII 382

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  IL+   C  G +  A + F+ M        +V Y+ +I G  K+  ++ A++++  +
Sbjct: 383 THCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRL 442

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
               + P+  +Y+I+I GLCK G   EA
Sbjct: 443 PVEGVKPDARTYTIMILGLCKNGPRREA 470



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 5/182 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+    R ++A+ LF ++   Q  P+ + FT L+ A     R +       +M   G   
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  + +   +  A  +  +M +    P+IV++  L+ G C R  + +A    
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
              + +   P+VV Y  LI   CK G    A++L + M +      G L + L  YN   
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKK-----GRLAADLVTYNTLL 213

Query: 216 SG 217
           +G
Sbjct: 214 TG 215



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +F  +   G+ PDIIT+  ++ G C    +  A+  F  +   +     + + I
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK  ++++A  +F ++  +G K +  TY+ +I G  K+   + A +++  M E+ 
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481

Query: 128 I 128
           I
Sbjct: 482 I 482



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 54/105 (51%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           AF ++ EM ++   P+IV ++ ++  + K    +  +Y FH   +  +  D+ ++ ILI 
Sbjct: 599 AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +C+  R + A+ L   M++ G  P  + L +L +   Q +  QE
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQE 703


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKP 60
           L ++  +D A ++  ++  +G+EPD  T++ +I G+C+  ++DEA++L+ E LT    KP
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T LID FCK G ++ A  M   M  +    NVVTYS L+ G  K+ ++  A D++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M      PN+V+Y+ LI GLC    ++ A             PD V+Y  L+ GYC+ 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GR  EA QL+  M     +PD +  + L
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCL 330



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 1/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +DAA  L  ++T     PD ++YN ++ GYC L R++EA QLF+++      P+ IT+T
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328

Query: 67  ILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            L+  FC   R+++A  +   M    G   +VVTYS ++ GY +++    A +  +EM  
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            N++PN V+YS LIDGLCK G ++ A+      ++  + P V T+  +I   C+ G   E
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDE 448

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A +L  +M  +G+ P  +  +TL
Sbjct: 449 AWKLLVAMAAHGLEPGMVTYTTL 471



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 120/201 (59%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSITFTIL 68
           A ++  ++ D + + PD++TY+T+I G+C    +D A ++  E +T   + P+ +T+T +
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE-MCENN 127
           +D  C++G+MD A  M  +M  KG + +  T+S LI G+  ++ +  A  +Y+E +  ++
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y+ LIDG CK G +E+A+           +P+VVTY+ L+ G CKAG   +A+
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M   G +P+ +  +TL
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTL 260



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 116/200 (58%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD AL LF ++T +G  P+++TY T+I G C+ +++D A  L +++T     P+
Sbjct: 229 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPD 288

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++  L+D +C+ GR+++A  +F +M  K    + +TY+CL+ G+  +  ++ A  + E
Sbjct: 289 TVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLE 348

Query: 122 EM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M     I P++V+YSI++ G  +     EA       +  ++ P+ VTY+ LI G CKA
Sbjct: 349 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 408

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           GR   AM++  +M+   + P
Sbjct: 409 GRVDHAMEVLKNMVNKRVEP 428



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 121/221 (54%), Gaps = 2/221 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+ A+K+ G +  R   P+++TY++++ G C    LD+A+ LF ++T     PN +
Sbjct: 196 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 255

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   C   ++D A ++  +M       + V+Y+ L+DGY +   ++ A  +++EM
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGR 182
              +  P+ ++Y+ L+ G C    +EEA +   +      + PDVVTY+I++ GY +A R
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             EA +    M+   + P+ +  S+L D  L  +G  +H +
Sbjct: 376 FVEAAEFIQEMIARNVAPNAVTYSSLID-GLCKAGRVDHAM 415



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 2/209 (0%)

Query: 4   KECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K+  +D A ++  ++  R G+ PD++TY +++ G C   ++D A ++  ++    ++P+ 
Sbjct: 89  KQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDK 148

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            TF+ LI  +C   ++D+A  ++ ++L     K +VVTY+ LIDG+ KS N++ A  +  
Sbjct: 149 FTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG 208

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN+V+YS L+ GLCK G +++AL  F        +P+VVTY  LI G C A 
Sbjct: 209 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A  L D M      PD +  + L D
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLD 297



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P ++T+  II G+C  N+L +A+  FEK+    + PN  T+ ++++  CK      A  
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 84  MFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENNISPNIVSYSILIDG 141
           +  +M + K    ++VTYS +I+G+ K   M  A ++  EM   + I+P++V+Y+ ++DG
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML-RNGIMP 200
           LC+ G M+ A           + PD  T++ LI G+C A +  EA++LY  +L  +   P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 201 DGLLLSTLAD 210
           D +  + L D
Sbjct: 183 DVVTYTALID 192



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 9/183 (4%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           T  G++PD++TY+ ++ GY    R  EA +  +++    + PN++T++ LID  CK GR+
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           D A  +   M+ K  + +V T++ +I    +  +M  A+ +   M  + + P +V+Y+ L
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471

Query: 139 IDGLCKRGLMEEALYAFHC--------ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++G  + G ME A   F          +   +L+P+   ++ LIRG CKA    +AM + 
Sbjct: 472 LEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVV 530

Query: 191 DSM 193
           + +
Sbjct: 531 EEL 533



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 5/156 (3%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMK 114
           ++ +P  +T+TI+ID FCK  ++  A   F KM E   P  N  TY+ +++G  K++   
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAP--NERTYNVVVNGLCKARLTS 58

Query: 115 SAFDVYEEMCE-NNISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAI 172
            A++V +EM +  +++P++V+YS +I+G CK+G M+ A          + + PDVVTY  
Sbjct: 59  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++ G C+ G+   A ++   M   G+ PD    S L
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   + ++ +EP + T+N++I   C L  +DEA +L   +    L+P 
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 464

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM----LEKGPKANVV---TYSCLIDGYFKSQNMK 114
            +T+T L++ F + GRM+ A  +F  M     +    AN+V    +S LI G  K++ + 
Sbjct: 465 MVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREID 524

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            A  V EE+      P       ++DGL + G  EEA
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 561


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKKMIKENIRLDDVAYTAL 352



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 KMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +K+    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 114/201 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+   +  +G E DI T NTI  G   LN+ +EA +    +    + PN +++T 
Sbjct: 122 IDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTT 181

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CKEG   +A  +F +M + G + N VTY+ LIDG+ K   MK A+++ +EM    
Sbjct: 182 LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKG 241

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+I +Y+ L+ G C  G +++A+  F+      L  +VVTY  +I G  K GR  EA 
Sbjct: 242 IFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAF 301

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +LYD M   G+ PD  + ++L
Sbjct: 302 KLYDEMTEAGLTPDDRVYTSL 322



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 106/229 (46%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D   ++F ++ ++G++ DI  Y  +I   C +     A  LF++LT   L  N  T+  
Sbjct: 17  IDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGA 76

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---------- 117
           LID  CK G M+ A ++ ++M  +G   N + Y+ LIDGY K   +  AF          
Sbjct: 77  LIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKG 136

Query: 118 ---DVY---------------EE-------MCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              D+Y               EE       M E  + PN+VSY+ LID  CK G   EA 
Sbjct: 137 FENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAK 196

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             F         P+ VTY +LI G+ K GR  EA +L D M   GI PD
Sbjct: 197 KLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPD 245



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           + TY  +I  + S  ++DE  ++FE++    +K +   +T++I+  CK G    A  +F 
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           ++ EKG  ANV TY  LIDG  K+  M++A  +  EM    +  N + Y+ LIDG CKRG
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 147 LMEEA---------------LYAFHCALD--------------------NHLLPDVVTYA 171
           L++EA               +Y  +   D                      ++P+VV+Y 
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI  YCK G   EA +L+  M + G  P+ +  + L D
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLID 219



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 82/141 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A KLF ++   G EP+ +TYN +I G+    R+ EA +L +++    + P+  
Sbjct: 188 KEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIY 247

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L+   C  G++DDA  +F+++ +KG   NVVTY+ +I G  K    + AF +Y+EM
Sbjct: 248 TYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEM 307

Query: 124 CENNISPNIVSYSILIDGLCK 144
            E  ++P+   Y+ L+  L K
Sbjct: 308 TEAGLTPDDRVYTSLVSSLHK 328



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 92/172 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +    + ++G+ P++++Y T+I  YC      EA +LF+++     +PN++T+ +L
Sbjct: 158 EEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVL 217

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID   K+GRM +A  +  +M  KG   ++ TY+ L+ G      +  A +++ E+ +  +
Sbjct: 218 IDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGL 277

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             N+V+Y+ +I GL K G  EEA   +    +  L PD   Y  L+    KA
Sbjct: 278 PLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 60/107 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +L  ++  +G+ PDI TY +++ G C   +LD+AV+LF ++    L  N +
Sbjct: 223 KKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVV 282

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
           T+T +I    KEGR ++A  ++ +M E G   +   Y+ L+    K+
Sbjct: 283 TYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    + P+  
Sbjct: 154 KEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +MLEKG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN----HLLPDVVTYAILIRGYCK 179
              ++ P++V+Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 274 LSQSLLPDLVTYNALIYGLCKKGDLKQA----HDLIDEMSMXGLKPDKITYTTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 330 EGDLDTAFEHRKMMIQENIRLDDVAYTAL 358



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G+ PD+ TY+ +I G C  +++D+A +LF+++    L PNS+TFT 
Sbjct: 193 LDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTT 252

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A  ++ +ML +    ++VTY+ LI G  K  ++K A D+ +EM    
Sbjct: 253 LIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXG 312

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 373 KMLREMLSVGLKPD 386



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A KLF ++ ++GL P+ +T+ T+I G+C    +D A+++++++    L P+
Sbjct: 222 LCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK+G +  A  +  +M   G K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 MMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S M   G   +V TYS LI+G  K   M  A  +++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + PN V+++ LIDG CK G ++ A+  +   L   LLPD+VTY  LI G CK G
Sbjct: 237 EMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLKQAHDLIDEMSMXGLKPDKITYTTLID 325



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 63/145 (43%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 74  VFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 133

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 134 LECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L  +M  +G+ PD    S L
Sbjct: 194 DEGFRLKSAMHASGVHPDVYTYSVL 218


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 128/217 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ + + AL+LF  L  + L PD++ YN++I G C    L +A +L++ +   ++ PN +
Sbjct: 414 RDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV 473

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ILID+ C++G++++A     +M+ KG   N++TY+ +I GY +S N+K      ++M
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++NI P++++++ LI G  K   M  A   F+      + PD VTY ++I G+ + G  
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA +++  M  +GI PD     +L + ++ +  S+E
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKE 630



 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 119/201 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL++  ++   G  PD++TYNT++ G C  +RL +A +L  ++    + P+  TFT 
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C++G  + A  +F  +L +  + +VV Y+ LIDG  +  ++  A +++++M    
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN V+YSILID  C++G +EEA       +    LP+++TY  +I+GYC++G   +  
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q    M+++ I+PD +  +TL
Sbjct: 528 QFLQKMMQDNILPDLITFNTL 548



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 111/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ L   + ++GL+P I+T+N+++ G C   R D+A ++F  +    + P+  +F I
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC+ G +++A   + +M ++G   +VV++SCLI  +     M  A     EM    
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y+++I G C+ G M EAL      +    LPDVVTY  L+ G CK  R  +A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + M   G+ PD    +TL
Sbjct: 388 ELLNEMKERGVTPDLCTFTTL 408



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 118/213 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+K + ++  RG+ PD+++++ +I  + +  ++D A     ++  + L P+ + +T+
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC+ G M +A  +  +M+  G   +VVTY+ L++G  K   +  A ++  EM E  
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P++ +++ LI G C+ G  E+AL  F   L   L PDVV Y  LI G C+ G   +A 
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +L+D M    I P+ +  S L D + +    +E
Sbjct: 458 ELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D A  +  ++  R + PD++T+N +I        +D A+ L + +    LKP  +
Sbjct: 169 KSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIV 228

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  ++   CK  R D A  +F  M +     +V +++ LI G+ +   ++ A   Y+EM
Sbjct: 229 TFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEM 288

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ++P++VS+S LI     RG M+ A           L+PD V Y ++I G+C+AG  
Sbjct: 289 QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA+++ D M+  G +PD +  +TL
Sbjct: 349 SEALRVRDEMVGLGCLPDVVTYNTL 373



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 1/162 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T  I++ ++CK    D A  + S+M ++    +VVT++ LID  F++ ++ +A  + 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    + P IV+++ ++ GLCK    ++A   F       + PDV ++ ILI G+C+ 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G   EAM+ Y  M + G+ PD +  S L      + G  +H 
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL-FSTRGKMDHA 316



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 49/90 (54%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE ++  A  +F  +    ++PD +TYN II G+     ++EA ++F+K+    ++P+ 
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            T+  LI+     G   +A  +  +M+ +G
Sbjct: 613 YTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 1/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITYNT+I G C   ++DEA +L   +  V +KP+ +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +C+  RMDDA  +F +M+  G   N++TY+ ++ G F ++   +A ++Y  +
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            EA  L+ +   NG++PD    S +A+ NL   GS E 
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAE-NLIEQGSLEE 709



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +T RGLEPDI TY T++ GY +   L E   L + +    ++P+
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F ILI A+ K+ ++D A ++FSKM + G   NVV Y  +ID   KS ++  A   +E
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++PNI+ Y+ LI GLC     ++A       LD  +  + + +  +I  +CK G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E+ +L+D M+R G+ PD +  +TL D
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLID 524



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 114/197 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A+  F Q+ D GL P+II Y ++I G C+ ++ D+A +L  ++    +  
Sbjct: 420 VLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +ID+ CKEGR+ ++  +F  M+  G K +++TY+ LIDG   +  M  A  + 
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+IV+Y  LI+G C+   M++AL  F   + + + P+++TY I+++G    
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY S+ ++G
Sbjct: 600 RRTAAAKELYVSITKSG 616



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++   GL P+++ Y T+I   C    +D+A+  FE++    L PN I
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI   C   + D A  +  +ML++G   N + ++ +ID + K   +  +  +++ M
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++Y+ LIDG C  G M+EA       +   + PD+VTY  LI GYC+  R 
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M+ +G+ P+
Sbjct: 568 DDALALFKEMVSSGVSPN 585



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 111/196 (56%), Gaps = 3/196 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITF 65
           DA   +  ++T+ G  PD+ +YN ++ G C  NR  EA++L   +   +     P+ +++
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +++ F KEG  D A   + +ML++G   +VVTYS +I    K+Q M  A +V   M +
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N + P+ ++Y+ ++ G C  G  +EA+        + + P+VVTY+ L+   CK GR TE
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 186 AMQLYDSMLRNGIMPD 201
           A +++DSM + G+ PD
Sbjct: 325 ARKIFDSMTKRGLEPD 340



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 4/221 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNS 62
           +   LD      G +  +G   D IT+  ++ G C+  R  +A+ +   ++T +   P+ 
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDV 163

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            ++  L+   C E R  +A  +   M +    G   +VV+Y+ +++G+FK  +   A+  
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y EM +  I P++V+YS +I  LCK   M++A+   +  + N ++PD +TY  ++ GYC 
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 283

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +G+P EA+     M  +G+ P+ +  S+L +Y  ++  S E
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 3/194 (1%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   + D    G  PD+++YNT++ G+      D+A   + ++    + P+ +T++ 
Sbjct: 182 ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 241

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A CK   MD A  + + M++ G   + +TY+ ++ GY  S   K A    ++M  + 
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V+YS L++ LCK G   EA   F       L PD+ TY  L++GY   G   E  
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 188 QLYDSMLRNGIMPD 201
            L D M+RNGI PD
Sbjct: 362 ALLDLMVRNGIQPD 375



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 4/209 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PDI+TY T+I GYC ++R+D+A+ LF+++    + PN IT+ I
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++       R   A  ++  + + G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +     +++I+I  L K G M+EA  L+A H A  N L+PDV TY+++     + G   E
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA--NGLVPDVRTYSLMAENLIEQGSLEE 709

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
              L+ SM  NG   D  +L+++    LQ
Sbjct: 710 LDDLFLSMEENGCSADSRMLNSIVRKLLQ 738



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 43/233 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P   T+ I
Sbjct: 39  ARHVFDELLRRGRGASIYGLNRALAD-VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAI 97

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LI   C+ GR+D        +++KG + + +T++ L+ G    +    A D+        
Sbjct: 98  LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157

Query: 121 -------------EEMCENNIS-------------------PNIVSYSILIDGLCKRGLM 148
                        + +C+ N S                   P++VSY+ +++G  K G  
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++A   +H  LD  +LPDVVTY+ +I   CKA    +AM++ ++M++NG+MPD
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 270



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T  G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GRMD+A  +F+     G   +V TYS + +   +  +++   D++  M EN  S
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            +    + ++  L +RG +  A
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRA 745


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 129/217 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ + + AL+LF  L  + L PD++TYN++I G C    L +A +L++ +   ++ PN I
Sbjct: 414 RQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHI 473

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ILID+ C++G+++DA     +M++KG   N+ TY+ +I GY +S N+K      ++M
Sbjct: 474 TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM 533

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++N+ P++++++ LI G  K   M  A   F+      + PD VTY ++I G+ + G  
Sbjct: 534 RQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNM 593

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A +++  M  +GI PD     +L + ++ +  S++
Sbjct: 594 QDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQ 630



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 118/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL++  ++   G  PD++TYNT++ G C  +RL +A +L  ++    + P+  TFT 
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C++G  ++A  +F  +L +  + +VVTY+ LIDG  +  ++  A +++++M    
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN ++YSILID  C++G +E+A       +    LP++ TY  +I+GYC++G   +  
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q    M ++ + PD +  +TL
Sbjct: 528 QFLQKMRQDNVFPDLITFNTL 548



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 109/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA+ L   + +RGL+P I+TYN+++ G C   R D+A ++F  +    + P+  +F I
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC+ G + +A   + +M  +    +VV++SCLI  + +   M  A     EM    
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y+++I G C+ G M EAL      +    LPDVVTY  L+ G CK  R  +A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + M   G+ PD    +TL
Sbjct: 388 KLLNEMEERGVTPDLCTFTTL 408



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 110/200 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+K + ++  R + PD+++++ +I  +     +D A     ++  + L P+ + +T++I 
Sbjct: 281 AVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIG 340

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+ G M +A  +  +M+  G   +VVTY+ L++G  K   +  A  +  EM E  ++P
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +++ LI G C++G  E AL  F   L   L PDVVTY  LI G C+ G   +A +L+
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M    I+P+ +  S L D
Sbjct: 461 DDMHAREILPNHITYSILID 480



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 114/201 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +   +D A     ++   GL PD + Y  +I G+C    + EA+++ +++      P
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP 365

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L++  CK+ R+ DA  + ++M E+G   ++ T++ LI GY +  N ++A  ++
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + +    + P++V+Y+ LIDG+C++G + +A   +       +LP+ +TY+ILI  +C+ 
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A    D M++ G +P+
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPN 506



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D A  +  ++  R + PD++T+N +I        +D A+ L + +    LKP  +
Sbjct: 169 KTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIV 228

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  ++   CK  R D A  +F  M +     +V +++ LI G+ +   +K A   Y+EM
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEM 288

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P++VS+S LI    +RG M+ A           L+PD V Y ++I G+C+AG  
Sbjct: 289 QHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA+++ D M+  G +PD +  +TL
Sbjct: 349 SEALRVRDEMVGFGCLPDVVTYNTL 373



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T  I++ ++CK    D A  + S+M ++    +VVT++ LID  F++ ++ +A  + 
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    + P IV+Y+ ++ GLCK    ++A   F       + PDV ++ ILI G+C+ 
Sbjct: 216 DSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRV 275

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA++ Y  M    + PD +  S L
Sbjct: 276 GEVKEAVKFYKEMQHRYVTPDVVSFSCL 303



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 80/177 (45%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +I  Y    +  EA + F  L   ++   +     L+    + G    A   
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           +  +L    + N  T + ++  Y K+     A  V  EM +  + P++V++++LID   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G ++ A+       +  L P +VTY  +++G CK  R  +A +++ +M +  + PD
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPD 261



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 45/90 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE ++  A  +F  +    + PD +TYN II G+     + +A ++F+ +    ++P+ 
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDR 612

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            T+  LI+     G    A  +  +M+ +G
Sbjct: 613 YTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/133 (19%), Positives = 54/133 (40%)

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           + S +L   P      +  LI  Y +S+  + AF+ +  + ++ +     + + L+  L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G    A  A+   L +    +  T  I++  YCK      A  +   M +  + PD +
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 204 LLSTLADYNLQSS 216
             + L D   ++ 
Sbjct: 194 THNVLIDARFRAG 206


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 116/207 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L++A  L G +   G+ PD+ TY   + G C   R+ +AV++FE++    + PN++
Sbjct: 291 KASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTV 350

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            FT LIDA CKEG +     +  +M  +G K ++V Y+ L +G  + +++K+A D+ EEM
Sbjct: 351 VFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM 410

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N + P+ V+Y+ LIDG CK G ++ A+       D  +  D VTY  LI G  K+GR 
Sbjct: 411 RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRS 470

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++ ++   M+  G+ PD    + + D
Sbjct: 471 VDSERILCEMMEAGLEPDNTTYTMVID 497



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++ A L+L  ++  RG++ D++ YN +  G C +  L  A  + E++    LKP+ +
Sbjct: 361 KEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKV 420

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID FCKEG +D A  M  +M ++G   + VTY+ LI G  KS     +  +  EM
Sbjct: 421 TYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEM 480

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+  +Y+++ID  CK   ++          +    P VVTY +++ G+C  G+ 
Sbjct: 481 MEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQM 540

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L ++ML  G+ PD +  + L D
Sbjct: 541 KNADMLLNAMLNIGVCPDDITYNILLD 567



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 122/215 (56%), Gaps = 4/215 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L AA  +  ++ + GL+PD +TY T+I G+C    LD A+++ ++++   +  + +T+T 
Sbjct: 400 LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTT 459

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K GR  D+  +  +M+E G + +  TY+ +ID + K+ ++K+ F + +EM    
Sbjct: 460 LISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKG 519

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P +V+Y+++++G C  G M+ A    +  L+  + PD +TY IL+ G+CK G+  +A 
Sbjct: 520 RKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE 579

Query: 188 QLYDSMLRNGIMPD-GLLLSTLADYNLQSSGSQEH 221
           +L  +    G++ D GL  S + ++  + S    H
Sbjct: 580 ELKSA---KGMVSDFGLYTSLINEFVKKKSTKSYH 611



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A   + QL D G+ P+   +N ++       +L  A  +F+++    + P  +TF  L+ 
Sbjct: 228 AYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMS 287

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   ++ A  +   M + G   +V TY   + G  K+  ++ A +++EEM E  ++P
Sbjct: 288 GMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNP 347

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V ++ LID  CK G +   L          +  D+V Y  L  G C+      A  + 
Sbjct: 348 NTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIV 407

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M  NG+ PD +  +TL D
Sbjct: 408 EEMRNNGLKPDKVTYTTLID 427



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 86/148 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+++  +++D G+  D +TY T+I G     R  ++ ++  ++    L+P++ 
Sbjct: 431 KEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNT 490

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++IDAFCK   +     +  +M  KG K  VVTY+ +++G+     MK+A  +   M
Sbjct: 491 TYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAM 550

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
               + P+ ++Y+IL+DG CK G + +A
Sbjct: 551 LNIGVCPDDITYNILLDGHCKHGKVRDA 578



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 3/174 (1%)

Query: 40  LNRLD---EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           +NRL    EA   + +L    + P +  F +L+    + G++  A  MF +ML +G    
Sbjct: 219 MNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPT 278

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           VVT++ L+ G  K+ ++ SA  +   M +  ++P++ +Y   + GLCK G +++A+  F 
Sbjct: 279 VVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFE 338

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +  + P+ V +  LI  +CK G     ++L+  M   GI  D +  + LA+
Sbjct: 339 EMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALAN 392


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K   +  A +L  ++   G +P++ T+ ++I G C     + A +LF KL      KP
Sbjct: 324 LCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKP 383

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T +I  +CKE ++  A M+F +M E+G   N  TY+ LIDG+ K+ N   A+++ 
Sbjct: 384 NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 443

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M      PN  +Y+ ++DGLCKRG  EEA    +    N +  D VTY ILI   CK 
Sbjct: 444 ELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKR 503

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +A+   + M + G  PD  L +TL
Sbjct: 504 ADMNQALVFLNKMFKVGFQPDIHLYTTL 531



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +   A +L   +++ G  P+  TYN+I+ G C   R +EA +L       Q++ + +
Sbjct: 432 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 491

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI   CK   M+ A +  +KM + G + ++  Y+ LI  + +   MK +  +++E+
Sbjct: 492 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 551

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ++P   +Y+ +I G C+   +  A+  F    D+   PD ++Y  LI G CK  R 
Sbjct: 552 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 611

Query: 184 TEAMQLYDSMLRNGIMP 200
            EA QLYD+M+  G+ P
Sbjct: 612 DEARQLYDTMIDKGLSP 628



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ +RG   D  T   II  +C  + ++ AV  F K+T + L PN I ++ +I   CK G
Sbjct: 269 EMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 328

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNISPNIVSY 135
            +  A  +  +M++ G K NV T++ LI G  K    + AF ++ ++   +N  PN+ +Y
Sbjct: 329 SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 388

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           + +I G CK   +  A   F    +  L+P+  TY  LI G+CKAG  ++A +L + M  
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448

Query: 196 NGIMPDGLLLSTLAD 210
            G  P+    +++ D
Sbjct: 449 EGFFPNTCTYNSIVD 463



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+   + A +LF +L      +P++ TY  +I GYC   +L  A  LFE++    L P
Sbjct: 359 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+T LID  CK G    A  +   M  +G   N  TY+ ++DG  K    + AF + 
Sbjct: 419 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 478

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
               +N I  + V+Y+ILI   CKR  M +AL   +        PD+  Y  LI  +C+ 
Sbjct: 479 NTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQ 538

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
               ++ +L+D +++ G+ P
Sbjct: 539 NMMKDSEKLFDEVIKLGLAP 558



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A  LF ++ ++GL P+  TY T+I G+C      +A +L E ++     PN+ 
Sbjct: 397 KEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTC 456

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  ++D  CK GR ++A  + +   +   +A+ VTY+ LI    K  +M  A     +M
Sbjct: 457 TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 516

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P+I  Y+ LI   C++ +M+++   F   +   L P   TY  +I GYC+  + 
Sbjct: 517 FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKV 576

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTL 208
           + A++ +  M  +G  PD    G L+S L
Sbjct: 577 SLAVKFFQKMSDHGCAPDSISYGALISGL 605



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 94/192 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A KL        +E D +TY  +I   C    +++A+    K+  V  +P+
Sbjct: 465 LCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPD 524

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T LI AFC++  M D+  +F ++++ G      TY+ +I GY + + +  A   ++
Sbjct: 525 IHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQ 584

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M ++  +P+ +SY  LI GLCK   ++EA   +   +D  L P  VT   L   YCK  
Sbjct: 585 KMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTE 644

Query: 182 RPTEAMQLYDSM 193
               AM + + +
Sbjct: 645 DFASAMVILERL 656



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 98/189 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +   + ++GL       N II     +  ++ A  +F++++   + P+S T+  
Sbjct: 190 LKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKY 249

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C+ G + +A     +M+E+G   +  T + +I  + +   +  A   + ++ +  
Sbjct: 250 IIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 309

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SPN+++YS +I GLCKRG +++A       + N   P+V T+  LI G CK G    A 
Sbjct: 310 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 369

Query: 188 QLYDSMLRN 196
           +L+  ++R+
Sbjct: 370 RLFLKLIRS 378



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%)

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +F +M  +G   +  TY  +I GY ++ N+  A     EM E     +  + +++I 
Sbjct: 228 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 287

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             C++ L+  A++ FH      L P+++ Y+ +I G CK G   +A +L + M++NG  P
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347

Query: 201 D 201
           +
Sbjct: 348 N 348



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +  A+K F +++D G  PD I+Y  +I G C  +RLDEA QL++ +    L P  +
Sbjct: 572 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 631

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK 91
           T   L   +CK      A ++  ++ +K
Sbjct: 632 TRVTLTYEYCKTEDFASAMVILERLNKK 659


>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 444

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 122/215 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A+K+F ++  +G++P+++TYN++I G C+  +++EA  L +++    L+PN IT  
Sbjct: 230 NVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHN 289

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++ FCK   +  A  +F  M ++    NV TY+ LID Y K +NM+ AF +Y  M   
Sbjct: 290 ALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 349

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++ +Y+ LI GLC++G +E A          HL  D++TY IL+   C  G   + 
Sbjct: 350 GVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKT 409

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           ++L D M + G+ P  L  +T+ D   +    ++H
Sbjct: 410 LRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQH 444



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 110/180 (61%), Gaps = 3/180 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    DA LK   ++   G+ P+ +T+N +I G+C+   +  A+++F ++    +KPN
Sbjct: 193 LVKMYKADAILK---EMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPN 249

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C  G++++AT +  +M+    + N++T++ L++G+ K++ +K A +++E
Sbjct: 250 VVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFE 309

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I+PN+ +Y+ILID  CK   ME+A   +   L   + PDV TY  LI G C+ G
Sbjct: 310 DMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKG 369



 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 63/111 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +++ A  L+  +  +G+ PD+ TYN +I G C    L+ A     ++    LK + I
Sbjct: 332 KDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLI 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           T+ IL+D+ C +G M     +  +M +KG K + +TY+ +IDGY K  N++
Sbjct: 392 TYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLR 442



 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 44/77 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L+ A     ++  + L+ D+ITYN ++   C+   + + ++L +++    LKP+
Sbjct: 365 LCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPS 424

Query: 62  SITFTILIDAFCKEGRM 78
            +T+  +ID + KEG +
Sbjct: 425 QLTYNTMIDGYSKEGNL 441


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A KLF  + DRGL+P+ +TY  +I   C    +++A+ +F+++    ++  
Sbjct: 61  LGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMT 120

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LI+ +CK      A  + ++M+ KG   +  +YS LI G  +  ++ SA +++ 
Sbjct: 121 VYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHR 180

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N +S N+ +++ LI G CK G M+EA   FH  +++ L+P+ VT+ ++I GYC+ G
Sbjct: 181 EMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVG 240

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A QLYD ML  G+ PD     +L
Sbjct: 241 NIRKAFQLYDQMLDRGLTPDNYTYRSL 267



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 95/177 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL +F ++ ++G+   +  YN++I GYC  N   +A  L  ++    L P+
Sbjct: 96  LCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPS 155

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +++ LI   C++G +  A  +  +M       NV T++ LI G+ K  NM  A  ++ 
Sbjct: 156 PASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFH 215

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +M E+++ PN V+++++I+G C+ G + +A   +   LD  L PD  TY  LI   C
Sbjct: 216 KMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVC 272



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 33/241 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L +A++L  ++T   +  ++ T+  +I G+C    +DEA +LF K+    L PN
Sbjct: 166 LCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPN 225

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS------CLIDGYFKSQNM-- 113
            +TF ++I+ +C+ G +  A  ++ +ML++G   +  TY       CL  G  K++    
Sbjct: 226 EVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVA 285

Query: 114 ------------------------KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                                    SA  + +EM   +  PN  +Y+  +D L   G +E
Sbjct: 286 DLENNCAVLNSFSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELE 345

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A    H A+    L + VT+  LI+G+C AG+   A+ L      +G  PD +  ST+ 
Sbjct: 346 KA-KVLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTII 404

Query: 210 D 210
           +
Sbjct: 405 N 405



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 39/243 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP--- 60
           K+ ++D A +LF ++ +  L P+ +T+N +I GYC +  + +A QL++++    L P   
Sbjct: 203 KDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNY 262

Query: 61  --------------------------------NSITFTILIDAFCKEGRMDDATMMFSKM 88
                                           NS + T L+  FCKEG    A ++  +M
Sbjct: 263 TYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEM 319

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L      N  TY+C +D       ++ A  ++  M E  ++ N V+++ LI G C  G +
Sbjct: 320 LAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLEGCLA-NTVTFNTLIKGFCMAGQI 378

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A+       ++   PD ++Y+ +I   CK G   +A +L++ ML  G+ PD +  + L
Sbjct: 379 QGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTIL 438

Query: 209 ADY 211
             +
Sbjct: 439 IRW 441



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 35/227 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYC-------------------------SLN 41
           ++  A +L+ Q+ DRGL PD  TY ++I   C                         SL 
Sbjct: 241 NIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLT 300

Query: 42  RL-------DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK 94
            L         A  L +++      PNS T+   +D    EG ++ A ++ + MLE G  
Sbjct: 301 ALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCL 359

Query: 95  ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           AN VT++ LI G+  +  ++ A D+ ++  E+   P+ +SYS +I+ LCK G   +A   
Sbjct: 360 ANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFEL 419

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++  L   L PD+V Y ILIR     G   + + +Y  M+   ++P+
Sbjct: 420 WNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMVT--VLPE 464



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L+ A  L   + + G   + +T+NT+I G+C   ++  A+ L +K T     P+
Sbjct: 338 LANEGELEKAKVLHAAMLE-GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPD 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD--- 118
            I+++ +I+  CK G  + A  ++++ML KG K ++V Y+ LI    +  N+   FD   
Sbjct: 397 CISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILI----RWCNIHGEFDKGL 452

Query: 119 -VYEEM 123
            +Y +M
Sbjct: 453 GIYSDM 458



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%)

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           ++  + G   S ++  +F +  + C+  I  N+++ +  ID L K G   EA   F    
Sbjct: 19  WAWKLRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMA 78

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           D  L P+ VTYAILI   CK G   +A+ ++D M   GI
Sbjct: 79  DRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGI 117


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 11/220 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++  R + P  +TY+++I G+C  NRLD A  +F         P+
Sbjct: 333 FVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPD 392

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LI  +C+  R+DD   +  +M E G  AN +TY+ LI G+ +  ++ +A D+ +
Sbjct: 393 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 452

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC----ALD-------NHLLPDVVTY 170
           EM  + + PN+V+ + L+DGLC  G +++AL  F       +D       N + PDV TY
Sbjct: 453 EMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ILI G    G+  EA +LY+ M   GI+PD +  S++ D
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552



 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 40/239 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL  FG++T  G  P ++T+NT++ G C  +R+ EA+ LF ++     KPN +TFT 
Sbjct: 132 LPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTT 187

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKAN------------------------------- 96
           L++  C+EGR+ +A  +  +MLE G + N                               
Sbjct: 188 LMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVS 247

Query: 97  -----VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                VV Y+ +IDG +K      A +++ EM E  I P+IV+Y+ +I+G C  G   +A
Sbjct: 248 HIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDA 307

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  L+  + PDVVT++ LI  + K G+  EA +LYD ML   I+P  +  S++ D
Sbjct: 308 EQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMID 366



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A  LF ++ ++ + PDI+TYN +I G+C   R  +A QL +++   ++ P+
Sbjct: 263 LWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPD 322

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+AF KEG+  +A  ++ +ML +    + VTYS +IDG+ K   + +A  ++ 
Sbjct: 323 VVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFY 382

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                  SP+I++++ LI G C+   +++ +   H   +  L+ + +TY  LI G+C+ G
Sbjct: 383 LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG 442

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  L   M+ +G+ P+ +  +TL D
Sbjct: 443 DLNAAQDLLQEMISSGVCPNVVTCNTLLD 471



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 105/184 (57%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++ YNTII G     R  +A  LF ++   ++ P+ +T+  +I+ FC  GR  DA  +
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +MLE+    +VVT+S LI+ + K      A ++Y+EM   +I P+ V+YS +IDG CK
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +  ++ A + F+        PD++T+  LI GYC+A R  + ++L   M   G++ + + 
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430

Query: 205 LSTL 208
            +TL
Sbjct: 431 YTTL 434



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 89/151 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI E     A +L+ ++  RG+ PD ITY+++I G C  +RLDEA Q+F+ +      P+
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPD 578

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  +CK G +DD   +F +M ++G  A+ +TY  LI G+ K  N+  A D+++
Sbjct: 579 VVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQ 638

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + + P+ ++   ++ GL  +  +E A+
Sbjct: 639 EMISSGVYPDTITIRNMLTGLWSKEELERAV 669



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 113/212 (53%), Gaps = 11/212 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--------- 58
           L+AA  L  ++   G+ P+++T NT++ G C   +L +A+++F+ +   ++         
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503

Query: 59  --KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
             +P+  T+ ILI     EG+  +A  ++ +M  +G   + +TYS +IDG  K   +  A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +++ M   + SP++V+++ LI G CK G++++ L  F       ++ D +TY  LI G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + K      A+ ++  M+ +G+ PD + +  +
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNM 655



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 5/204 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LFG +      P +I +  ++     + R D  + L +K+  +++  N+ +FTI
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  FC   ++  A   F K+ + G    VVT++ L+ G      +  A D++ +MC+  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-- 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+++ L++GLC+ G + EA+      L++ L P+ +TY  ++ G CK G    A+
Sbjct: 180 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 188 QLYDSMLR-NGIMPDGLLLSTLAD 210
            L   M   + I+P+ ++ +T+ D
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIID 261



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 90/155 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+EPD+ TYN +ICG  +  +  EA +L+E++    + P++IT++ +ID  CK+ R+D+A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T MF  M  K    +VVT++ LI GY K+  +    +++ EM +  I  + ++Y  LI G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             K   ++ AL  F   + + + PD +T   ++ G
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTG 658



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 4/175 (2%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+  +  LD+A+ LF  +   +  P+ I F  L+    + GR D    +  KM       
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           N  +++ L+  +     +  A   + ++ +    P +V+++ L+ GLC    + EAL  F
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H        P+VVT+  L+ G C+ GR  EA+ L D ML +G+ P+ +   T+ D
Sbjct: 175 H----QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 225



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 67/122 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A ++F  +  +   PD++T+NT+I GYC    +D+ ++LF ++    +  +
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+  LI  F K   +D A  +F +M+  G   + +T   ++ G +  + ++ A  + E
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLE 673

Query: 122 EM 123
           ++
Sbjct: 674 DL 675


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 114/200 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  N++D+A +LF+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
             +A ++   ML  G+ PD 
Sbjct: 368 SVDAEKMLREMLSVGLKPDA 387



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML K    N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTAL 358



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A  +++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLKQANDLIDEMSMKGLQPDKITYTTLID 325



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI  + + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVL 218


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L  +L D G+ P++  YN +I   C   R D+A +LF+++    L+PN
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK------------ 109
            +T+ ILI A CK G ++DA  +F KM +KG K  V  Y+ LI+GY K            
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 110 -----------------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                  + ++ SA +++ EM E  I+ N  +++ LI+G CK  
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDK 492

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M+EA   F   +D++++P+ VT+ ++I GYC  G   +A QLYD M+  G+ PD     
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552

Query: 207 TL 208
           +L
Sbjct: 553 SL 554



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 2/221 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   GL P   +Y+ +I G C    L  A++L  ++    +  N+ 
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNY 479

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI+ FCK+ +MD+A  +F KM++     N VT++ +I+GY    N++ AF +Y++M
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E  + P+  +Y  LI GLC    + +A   F   L+N + + +  +   L+ G  + GR
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGLFREGR 598

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            TE   L+D M   G+  D +  + +    L+    ++ C+
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE ++  AL  + Q+   G  P+ +T+  +I   C    L  A  L +++    + PN
Sbjct: 663 LSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   +D F  EG M+ A  + S ML+ G  A++V+++ LI G  K+  ++ A D+  
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMR 781

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E+  SP+ +SYS +I  LCK G + +A   ++  L   L PDVV Y I IR     G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A+ +Y +M+R+G+ P+
Sbjct: 842 ESDKALGIYTNMIRSGVQPN 861



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   + + G+  D +TY T++ G+C +  L+ A+++   +  +   P+
Sbjct: 243 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPS 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + +ID   K+  +++A  +  K+ + G   NV  Y+ LID   K++    A  +++
Sbjct: 303 EANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFK 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+Y+ILI  LCKRG++E+AL  F    D  +   V  Y  LI GYCK G
Sbjct: 363 EMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG 422

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L   M++ G+ P     S L
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPL 449



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 69/271 (25%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICG--------------------YCSLN----- 41
           ++  A +L+ Q+ + GL+PD  TY ++I G                    Y  LN     
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 42  ----------RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                     R  E   L++++    +K + ++FTI++ A  K+   + + ++F +M E+
Sbjct: 588 ALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K + + Y+C+ID   K +NM  A + +++M  +  SPN V++++LI+ LCK G +  A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 152 ---------------LYAFHCALD-------------------NHLLPDVVTYAILIRGY 177
                           + ++C LD                      L  +V++ ILI+G 
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 767

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CKAG+  EA+ L   +  +G  PD +  ST+
Sbjct: 768 CKAGKIQEAIDLMRKITESGFSPDCISYSTI 798



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 104/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L +A++L  ++ +RG+  +  T+  +I G+C   ++DEA +LF+K+    + PN
Sbjct: 453 LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ++I+ +C  G +  A  ++ +M+E G K +  TY  LI G   +  +  A +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++  +    N  S + L+ GL + G   E  + +       +  D+V++ I++    K  
Sbjct: 573 DLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              ++  L+  M   G+ PD +  + + D
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMID 661



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  L  ++   G++   + YN ++ G C   R+ EAV++   +  + +  + +T+ 
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FC+   ++ A  +   M+  G   +    S +ID   K + ++ AF +  ++ + 
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+ LID LCK    ++A   F       L P+ VTYAILI   CK G   +A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 187 MQLYDSMLRNGI 198
           + L+D M   GI
Sbjct: 393 LCLFDKMRDKGI 404



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  LF ++   G+  D   Y   I  YC    LD A  L  ++    +K +
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +L+   CK  R+ +A  + + M+  G  A+ VTY  L+ G+ + + ++ A  +  
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKA 180
           +M      P+  + S +ID L K+ L+EEA ++  C L D  ++P+V  Y  LI   CK 
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEA-FSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  +A +L+  M   G+ P+ +  + L
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAIL 379



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T + ++ +  K  +   A  +F KML+ G   +   Y+  I  Y +S+N+  A  + 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    +  + V Y++L+ GLCK   ++EA+   +  ++  +  D VTY  L+ G+C+ 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
                A+++   M+R G +P
Sbjct: 282 EELEMALRITHDMIRLGFVP 301


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF Q+T +G++PD+ TYN +I G C+ +R  EA  L   +    + P+
Sbjct: 228 LCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 287

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ++   F K G +  A  +FS M   G + +VVTYS +I  +     MK A +V++
Sbjct: 288 VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFD 347

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNIV+Y+ LI G C+   M +A+Y     ++N L P++VT+  LI G+CKAG
Sbjct: 348 LMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAG 407

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P  A +L+  M ++G +PD
Sbjct: 408 KPVAAKELFFVMHKHGQLPD 427



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F  +  +G  P+I+TY ++I G+C +  +++A+    ++    L PN +T+  LI 
Sbjct: 342 AMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIG 401

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G+   A  +F  M + G   ++ T + ++DG FK      A  ++ E+ + N   
Sbjct: 402 GFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDL 461

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I+ YSI+++G+C  G + +AL  F       +  DVVTY I+I G CK G   +A  L 
Sbjct: 462 DIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLL 521

Query: 191 DSMLRNGIMPD 201
             M  NG  PD
Sbjct: 522 MKMEENGCPPD 532



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 104/201 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K  H   A+ L   ++  G++P++ T+N +I   C LN       +   +  + ++P
Sbjct: 87  IVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEP 146

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT +++  C EG +  A      + + G +++  T   +I+G  K  +  +A    
Sbjct: 147 SIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYL 206

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E N + ++ +Y+ ++DGLCK G++ EA   F       + PD+ TY  LI G C  
Sbjct: 207 KKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNF 266

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            R  EA  L  +M+R GIMPD
Sbjct: 267 DRWKEAAPLLANMMRKGIMPD 287



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H  AAL    ++ ++    D+  YN ++ G C    + EA  LF ++T   ++P+
Sbjct: 193 LCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPD 252

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C   R  +A  + + M+ KG   +V T++ +   + K+  +  A  ++ 
Sbjct: 253 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFS 312

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I  ++V+YS +I   C    M++A+  F   +    LP++VTY  LI G+C+  
Sbjct: 313 FMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIK 372

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +AM     M+ NG+ P+ +  +TL
Sbjct: 373 NMNKAMYFLGEMVNNGLDPNIVTWNTL 399



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 100/204 (49%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E ++  A++    L D G E D  T   II G C +     A+   +K+       +   
Sbjct: 161 EGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTA 220

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++D  CK+G + +A  +FS+M  KG + ++ TY+CLI G       K A  +   M 
Sbjct: 221 YNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMM 280

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I P++ +++++     K G++  A   F       +  DVVTY+ +I  +C   +  
Sbjct: 281 RKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMK 340

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +AM+++D M+R G +P+ +  ++L
Sbjct: 341 DAMEVFDLMIRKGCLPNIVTYTSL 364



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 96/202 (47%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H      + G +   G+EP I+T+ TI+ G C    + +A++  + L  +  + +  T  
Sbjct: 128 HTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRG 187

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CK G    A     KM E+    +V  Y+ ++DG  K   +  A+D++ +M   
Sbjct: 188 AIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGK 247

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++ +Y+ LI GLC     +EA       +   ++PDV T+ ++   + K G  + A
Sbjct: 248 GIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRA 307

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             ++  M   GI  D +  S++
Sbjct: 308 KSIFSFMGHMGIEHDVVTYSSI 329



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 36/219 (16%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR------------------------ 42
           +++ A+   G++ + GL+P+I+T+NT+I G+C   +                        
Sbjct: 373 NMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCA 432

Query: 43  --LD---------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
             LD         EA+ LF +L  +    + I ++I+++  C  G+++DA  +FS +  K
Sbjct: 433 IILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSK 492

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K +VVTY+ +I+G  K   +  A D+  +M EN   P+  +Y++ + GL +R  + ++
Sbjct: 493 GVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKS 552

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
                         +  T  +LI  Y  A +   A Q++
Sbjct: 553 TKYLMFMKGKGFRANATTTKLLIN-YFSANKENRAFQVF 590



 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 84/194 (43%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL  + ++      P +  +N +      +     A+ L + ++ + +KPN  T  I
Sbjct: 59  VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNI 118

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  C+         +   M + G + ++VT++ +++G     N+  A    + + +  
Sbjct: 119 VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 178

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              +  +   +I+GLCK G    AL       + +   DV  Y  ++ G CK G   EA 
Sbjct: 179 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAW 238

Query: 188 QLYDSMLRNGIMPD 201
            L+  M   GI PD
Sbjct: 239 DLFSQMTGKGIQPD 252



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 67/155 (43%)

Query: 39  SLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           ++  +D A+  + K+  ++  P    F +L     K      A  +   M   G K NV 
Sbjct: 55  NVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVP 114

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           T++ +I+   +  +    F V   M +  + P+IV+++ +++GLC  G + +A+      
Sbjct: 115 THNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL 174

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            D     D  T   +I G CK G  + A+     M
Sbjct: 175 KDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKM 209



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 56/134 (41%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            +D+      +D A   + KM+   P   V  ++ L     K ++  +A  + + M    
Sbjct: 49  FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIG 108

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +++I+I+ LC+                  + P +VT+  ++ G C  G   +A+
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168

Query: 188 QLYDSMLRNGIMPD 201
           +  D +   G   D
Sbjct: 169 RFVDHLKDMGYESD 182


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 116/198 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLC++G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A +    M++  I  D
Sbjct: 328 ETAFEHRKRMIQENIQLD 345



 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  +  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 YLDAEKVLREMLSVGLKPD 380



 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   C++G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V Y+ LI GLC+ G   +A       L   L PD +TY ++I  +CK G
Sbjct: 336 RMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGQMP 414



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F  +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + + M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G C+ G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 291 DLKQARDLIDEMSMKGLKPDKITYTTLID 319



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 74/133 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  +  +ML  G K + +TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGQMPSVVT 418



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F+      L P VV++  L+ GY + G   
Sbjct: 129 ECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +M  +G+ PD    S L
Sbjct: 189 EGFRLKTAMHASGVQPDVYTYSVL 212


>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           herrerae]
          Length = 395

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 135 KEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVY 194

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++SP++++Y+ L  GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 255 LSQSLSPDLITYNTLTYGLCKKGDLKQA----HDLIDEMSMKGLKPDKITYTTLIDGCCK 310

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D ++ + L
Sbjct: 311 EGDMETAFEHQKRMIQENIRLDDVVYTAL 339



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 174 LDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ L  G  K  ++K A D+ +EM    
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKG 293

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ME A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 294 LKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 353

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ P+
Sbjct: 354 KMLREMLSVGLKPN 367



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 203 LCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 262

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L    CK+G +  A  +  +M  KG K + +TY+ LIDG  K  +M++AF+  +
Sbjct: 263 LITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQK 322

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V Y+ LI GLC+ G   +A       L   L P+  TY ++I  +CK G
Sbjct: 323 RMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKG 382

Query: 182 RPTEAMQLYDSM 193
                 +L   M
Sbjct: 383 DVWTGSKLLKEM 394



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 98  LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPS 157

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + + M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 158 VVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 217

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  L  G CK G
Sbjct: 218 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKG 277

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 278 DLKQAHDLIDEMSMKGLKPDKITYTTLID 306



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 39/183 (21%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC--LIDGYFKSQNMKSAFDVYEE 122
           F+ LI  + + G + DA   +   L +  K  V    C  +++   K +  K  +  Y+E
Sbjct: 56  FSGLITXYLESGFLRDAIECYR--LTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKE 113

Query: 123 MCENNISPNIVSYSILIDGLCKRG---------------LMEEALYAFHCALDNHLL--- 164
           + E     ++  ++IL+   CK G                +  ++ +F+  ++ ++    
Sbjct: 114 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 173

Query: 165 -----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                            PDV TY++LI G CK  +  +A +L+D ML  G++P+G+  +T
Sbjct: 174 LDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 233

Query: 208 LAD 210
           L D
Sbjct: 234 LID 236


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 3/198 (1%)

Query: 7   HLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            +D A +L   + ++   +PDI+ +N II G+C   R+ EA ++ E L  +   PN++T+
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTY 213

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T LID FCK G + +A  +F  +  +   A  NVVT++ LI G  K+  ++ AF++ ++M
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++  +  +Y+ L+DGLCK+G   E    F   L     P VVTY  L+  +CKAG  
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q+  SM+  GI PD
Sbjct: 334 QDAQQVIRSMVAKGIPPD 351



 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 114/200 (57%), Gaps = 2/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           K  +L  AL+LF  L+ R    EP+++T+N +I G C  +RL+ A +L +++    L+ +
Sbjct: 222 KSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRAD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+T L+D  CK+GR  + + +F +ML +G   +VVTY+ L+  + K+ +++ A  V  
Sbjct: 282 TFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIR 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I P++ +Y++L++GL + G +  A   F   L     P  V Y+ L+RG CKA 
Sbjct: 342 SMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAA 401

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              EA++ Y  ML   + PD
Sbjct: 402 LVDEAVKYYVEMLDRRLAPD 421



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 8   LDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           LD AL+LF ++     L P+  TY  II  YC ++RLD+A QL E+ +C     + I  T
Sbjct: 86  LDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCS--SDVIAIT 143

Query: 67  ILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +   FCK  R+D+A  +   M+E K  K ++V ++ +I G+ K+  ++ A+++ E +  
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS 203

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHC--ALDNHLLPDVVTYAILIRGYCKAGRP 183
               PN V+Y+ LIDG CK G + EAL  F    + D+H  P+VVT+  LI G CKA R 
Sbjct: 204 MGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRL 263

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L   M    +  D    +TL D
Sbjct: 264 EHAFELVKQMKARDLRADTFTYTTLMD 290



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 97/181 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A +L  Q+  R L  D  TY T++ G C   R  E  ++FE++      P+
Sbjct: 257 LCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPS 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+ A CK G + DA  +   M+ KG   +V TY+ L++G F++  +++A + +E
Sbjct: 317 VVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFE 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++      P  V YS L+ G CK  L++EA+  +   LD  L PD  T  +L+   CK G
Sbjct: 377 KILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436

Query: 182 R 182
           R
Sbjct: 437 R 437



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QLKPNSITFTIL 68
           A ++   L   G  P+ +TY T+I G+C    L EA+QLF+ L+      +PN +TF  L
Sbjct: 194 AYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK  R++ A  +  +M  +  +A+  TY+ L+DG  K         V+EEM     
Sbjct: 254 ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC 313

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P++V+Y+ L+   CK G +++A       +   + PDV TY +L+ G  + G+   A +
Sbjct: 314 NPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATE 373

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
            ++ +LR    P  ++ S L
Sbjct: 374 FFEKILRERCPPCAVVYSAL 393



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 38/221 (17%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+  T++ +I G C   RL EAV+ + ++      PN     +L+ + C+ G+MD A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLC 143
           F + ++  P  +V+T + LI+G+ + Q +  A +++ EM +N  + P   +Y+ +I   C
Sbjct: 61  F-RGIQCSP--SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 144 K-------RGLMEEAL-----------------------YAFHCALD----NHLLPDVVT 169
           K       R L+EE+                         A+   LD        PD+V 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + ++I G+CKAGR  EA ++ ++++  G +P+ +  +TL D
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A + F ++      P  + Y+ ++ G C    +DEAV+ + ++   +L P+  T  +L++
Sbjct: 371 ATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVE 430

Query: 71  AFCKEGRMD 79
             CK GR D
Sbjct: 431 MLCKRGRTD 439


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 3/198 (1%)

Query: 7   HLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            +D A +L   + ++   +PDI+ +N II G+C   R+ EA ++ E L  +   PN++T+
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTY 213

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T LID FCK G + +A  +F  +  +   A  NVVT++ LI G  K+  ++ AF++ ++M
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++  +  +Y+ L+DGLCK+G   E    F   L     P VVTY  L+  +CKAG  
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q+  SM+  GI PD
Sbjct: 334 QDAQQVIRSMVAKGIPPD 351



 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 114/200 (57%), Gaps = 2/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           K  +L  AL+LF  L+ R    EP+++T+N +I G C  +RL+ A +L +++    L+ +
Sbjct: 222 KSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRAD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+T L+D  CK+GR  + + +F +ML +G   +VVTY+ L+  + K+ +++ A  V  
Sbjct: 282 TFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIR 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I P++ +Y++L++GL + G +  A   F   L     P  V Y+ L+RG CKA 
Sbjct: 342 SMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAA 401

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              EA++ Y  ML   + PD
Sbjct: 402 LVDEAVKYYVEMLDRRLAPD 421



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 8   LDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           LD AL+LF ++     L P+  TY  II  YC ++RLD+A QL E+ +C     + I  T
Sbjct: 86  LDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCS--SDVIAIT 143

Query: 67  ILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +   FCK  R+D+A  +   M+E K  K ++V ++ +I G+ K+  ++ A+++ E +  
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS 203

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHC--ALDNHLLPDVVTYAILIRGYCKAGRP 183
               PN V+Y+ LIDG CK G + EAL  F    + D+H  P+VVT+  LI G CKA R 
Sbjct: 204 MGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRL 263

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L   M    +  D    +TL D
Sbjct: 264 EHAFELVKQMKARDLRADTFTYTTLMD 290



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 97/181 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A +L  Q+  R L  D  TY T++ G C   R  E  ++FE++      P+
Sbjct: 257 LCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPS 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+ A CK G + DA  +   M+ KG   +V TY+ L++G F++  +++A + +E
Sbjct: 317 VVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFE 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++      P  V YS L+ G CK  L++EA+  +   LD  L PD  T  +L+   CK G
Sbjct: 377 KILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436

Query: 182 R 182
           R
Sbjct: 437 R 437



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QLKPNSITFTIL 68
           A ++   L   G  P+ +TY T+I G+C    L EA+QLF+ L+      +PN +TF  L
Sbjct: 194 AYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK  R++ A  +  +M  +  +A+  TY+ L+DG  K         V+EEM     
Sbjct: 254 ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC 313

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P++V+Y+ L+   CK G +++A       +   + PDV TY +L+ G  + G+   A +
Sbjct: 314 NPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATE 373

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
            ++ +LR    P  ++ S L
Sbjct: 374 FFEKILRERCPPCAVVYSAL 393



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 38/221 (17%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+  T++ +I G C   RL EAV+ + ++      PN     +L+ + C+ G MD A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLC 143
           F + ++  P  +V+T + LI+G+ + Q +  A +++ EM +N  + P   +Y+ +I   C
Sbjct: 61  F-RGIQCSP--SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 144 K-------RGLMEEAL-----------------------YAFHCALD----NHLLPDVVT 169
           K       R L+EE+                         A+   LD        PD+V 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + ++I G+CKAGR  EA ++ ++++  G +P+ +  +TL D
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A + F ++      P  + Y+ ++ G C    +DEAV+ + ++   +L P+  T  +L++
Sbjct: 371 ATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVE 430

Query: 71  AFCKEGRMD 79
             CK GR D
Sbjct: 431 MLCKRGRTD 439


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 123/214 (57%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++P++ITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +C+  RMDDA  +F +M+  G   N++TY+ ++ G F ++   +A ++Y  +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+ ++  NG++PD    S +A+ NL   G
Sbjct: 668 DEAKDLFAALSANGLVPDVRTYSLMAE-NLIEQG 700



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 113/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGLEPDI TY T++ GY +   L E   L + +    + P+   F ILI 
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++D+A ++FSKM + G   NVVTY  +I    KS ++  A   +E+M +  ++P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI+ Y+ LI  LC     ++A       LD  +  + + +  +I  +CK GR  E+ +L+
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+R G+ P+ +  STL D
Sbjct: 500 DLMVRIGVKPNVITYSTLID 519



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 115/218 (52%), Gaps = 4/218 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   + IT+  ++ G C+  R  +A+ +   ++T +   P+  + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           TIL+   C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  Y E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  ISP++V+YS +I  LCK   M++A+      + N ++P+ +TY  ++ GYC + +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           P EA+     M  +G+ PD +  ++L DY  ++  S E
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++   GL P+++TY  +I   C    +D+A+  FE++    L PN I
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI + C   + D A  +  +ML++G   N + ++ +I  + K   +  +  +++ M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+++YS LIDG C  G M+EA           + PD VTY  LI GYC+  R 
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M+ +G+ P+
Sbjct: 563 DDALALFKEMVSSGVSPN 580



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 111/197 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A+  F Q+ D GL P+II Y ++I   C  ++ D+A +L  ++    +  
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +I + CKEGR+ ++  +F  M+  G K NV+TYS LIDGY  +  M  A  + 
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G C+   M++AL  F   + + + P+++TY I+++G    
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  + ++G
Sbjct: 595 RRTAAAKELYVGITKSG 611



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 3/194 (1%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   + D    G  PD+++Y T+I G+      D+A   + ++   ++ P+ +T++ 
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A CK   MD A  + + M++ G   N +TY+ ++ GY  S+  K A    ++M  + 
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y+ L+D LCK G   EA   F       L PD+ TY  L++GY   G   E  
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356

Query: 188 QLYDSMLRNGIMPD 201
            L D M+RNGI PD
Sbjct: 357 ALLDLMVRNGIHPD 370



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+ +TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G + ++ TY  L+ GY     +     + +
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+   ++ILI    K+  ++EA+  F     + L P+VVTY  +I   CK+G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +AM  ++ M+  G+ P+ ++ ++L
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSL 447



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 109/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+D+A+ LF+++    + PN IT+ I
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++       R   A  ++  + + G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 587 ILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+PDV TY+++     + G   E  
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 706

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+ SM  NG   +  +L+++    LQ
Sbjct: 707 DLFLSMEENGCTANSRMLNSIVRKLLQ 733



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 43/233 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P   T+ I
Sbjct: 34  ARHVFEELLRRGRGASIYGLNRALAD-VARHSPAAAVSRYNRMARAGAGKVTPTVHTYGI 92

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LI   C+ GR+D        +++KG +   +T++ L+ G    +    A D+        
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 121 -------------EEMCENNIS-------------------PNIVSYSILIDGLCKRGLM 148
                        + +C+ N S                   P++VSY+ +I+G  K G  
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++A   +H  LD  + PDVVTY+ +I   CK     +AM++  +M++NG+MP+
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T  G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GR D+A  +F+ +   G   +V TYS + +   +   ++   D++  M EN  +
Sbjct: 659 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 718

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            N    + ++  L +RG +  A
Sbjct: 719 ANSRMLNSIVRKLLQRGDITRA 740



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 61/130 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L    L+ +  T+N +I     + R DEA  LF  L+   L P+  T++++
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 692

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +   ++G +++   +F  M E G  AN    + ++    +  ++  A      + E + 
Sbjct: 693 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHF 752

Query: 129 SPNIVSYSIL 138
           S    + S+L
Sbjct: 753 SLEASTASLL 762


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 115/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +   A+++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++S ++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L  +
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSAD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 102/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L  D++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 120/200 (60%), Gaps = 4/200 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA++L   +  V LKPN++
Sbjct: 458 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 517

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  RM DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 518 TYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 577

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
            E+     + +Y+I++ GLCK  L ++AL  F   C +D  L  +  T+ I+I    K G
Sbjct: 578 TESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL--EARTFNIMIDALLKVG 635

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L+ +   NG++P+
Sbjct: 636 RNGEAKDLFVAFSSNGLVPN 655



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 109/197 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL P  I YN++I G C+ N+ + A +L  ++    +  
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +ID+ CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  + 
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + PN V+Y  LI+G CK   M +AL  F     + + PD++TY I+++G  + 
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  +  +G
Sbjct: 565 RRTAAAKELYVRITESG 581



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 104/187 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD   YN +IC Y    ++DEA+ +F K+    L P+++T+  +I   CK GR++DA
Sbjct: 336 GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDA 395

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            + F +M+++G     + Y+ LI G       + A ++  EM +  I  N + ++ +ID 
Sbjct: 396 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 455

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G + E+   F   +   + PD++TY+ LI GYC AG+  EAM+L   M+  G+ P+
Sbjct: 456 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515

Query: 202 GLLLSTL 208
            +   TL
Sbjct: 516 TVTYRTL 522



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 108/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD +TY  +I   C   R+++A+  FE++    L P +I
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI   C   + + A  +  +ML++G   N + ++ +ID + K   +  +  +++ M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++YS LIDG C  G M+EA+      +   L P+ VTY  LI GYCK  R 
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 533 GDALVLFKEMESSGVSPD 550



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 4/201 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   + IT+  ++ G C+  R  +A+ +   ++T +   P+  + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           TIL+   C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  Y E
Sbjct: 162 TILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHE 221

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  ISP++V+YS +I  LCK   M++A+      + N ++P+  TY  ++ GYC +G+
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQ 281

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
           P EA+     +  +G+ PDGL
Sbjct: 282 PKEAIGFLKKVRSDGVEPDGL 302



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 5/212 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             KE     A   + ++ DR + PD++TY++II   C    +D+A+++   +    + PN
Sbjct: 206 FFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPN 265

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-----KANVVTYSCLIDGYFKSQNMKSA 116
             T+T ++  +C  G+  +A     K+   G      + ++ TY  L+ GY     +   
Sbjct: 266 CRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGM 325

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             + + M  N I P+   Y+ILI    K+G ++EA+  F       L PD VTY  +I  
Sbjct: 326 HALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGI 385

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            CK+GR  +AM  ++ M+  G+ P  ++ ++L
Sbjct: 386 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 417



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 40/249 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L K   +D A+++   +   G+ P+  TY +I+ GYCS  +  EA+   +K+        
Sbjct: 241 LCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300

Query: 54  ----------TCVQ----------------------LKPNSITFTILIDAFCKEGRMDDA 81
                     T +Q                      + P+   + ILI A+ K+G++D+A
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++FSKM ++G   + VTY  +I    KS  ++ A   +E+M +  +SP  + Y+ LI G
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC     E A       LD  +  + + +  +I  +CK GR  E+ +L+D M+R G+ PD
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480

Query: 202 GLLLSTLAD 210
            +  STL D
Sbjct: 481 IITYSTLID 489



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 108/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL   +   GL+P+ +TY T+I GYC ++R+ +A+ LF+++    + P+ IT+ I
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++ ++ E G +  + TY+ ++ G  K++    A  +++ +C  +
Sbjct: 557 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 616

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+ID L K G   EA   F     N L+P+  TY ++       G   E  
Sbjct: 617 LKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 676

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           QL+ SM  NG   D  +L+ +    LQ
Sbjct: 677 QLFLSMEDNGCTVDSGMLNFIVRELLQ 703



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 79/176 (44%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++   G+ PDIITYN I+ G     R   A +L+ ++T    +    T+ I++ 
Sbjct: 535 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 594

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    DDA  MF  +     K    T++ +ID   K      A D++     N + P
Sbjct: 595 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVP 654

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  +Y ++ + +  +GL+EE    F    DN    D      ++R   + G  T A
Sbjct: 655 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 710



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 8/205 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P   T+ I
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALAD-VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAI 92

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCEN 126
           LI   C+  R+D        +++KG +   +T++ L+ G    +    A D V   M E 
Sbjct: 93  LIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRGYCKAGRP 183
           +  P++ S +IL+ GLC     +EAL   H   D       PDVV+Y  +I G+ K G  
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A   Y  ML   I PD +  S++
Sbjct: 213 GKAYSTYHEMLDRRISPDVVTYSSI 237



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 78/165 (47%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+ ++T+ G + ++ TYN I+ G C     D+A+++F+ L  + LK  + TF I+I
Sbjct: 569 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 628

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K GR  +A  +F      G   N  TY  + +       ++    ++  M +N  +
Sbjct: 629 DALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 688

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            +    + ++  L +RG +  A        + H   +  T ++ I
Sbjct: 689 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 733


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 113/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A +L   + + G EPD  TYN ++ G+    +L+ A   F+++    L PN +++T
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 559

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K+G++D A  +  +M E G   NV +Y+ +I+G  K      A  + ++M E 
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ 619

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++Y+ LIDGLC+ G  + A   FH       LP++ TY+ LI G C+ G+  EA
Sbjct: 620 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 679

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M R G+ PD +  ++L D
Sbjct: 680 EILLKEMERKGLAPDEVTFTSLID 703



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 115/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  +F ++   G +P+ +TY+T+I G C+  R+DEA+ + E++    ++P   T+T
Sbjct: 290 NLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYT 349

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + I A C     ++A  + ++M ++G + NV TY+ LI G  +   ++ A  +Y +M + 
Sbjct: 350 LPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE 409

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN V+Y+ LI+ LC  G    AL  FH    +  L +  TY  +I+G C  G   +A
Sbjct: 410 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 469

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M L++ ML+ G +P  +  +TL +
Sbjct: 470 MVLFEKMLKMGPLPTVVTYNTLIN 493



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ L+ ++   GL P+ +TYN +I   C   R   A+++F  +       N+ T+  
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C  G ++ A ++F KML+ GP   VVTY+ LI+GY    N+ +A  + + M EN 
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +Y+ L+ G  K G +E A + F   ++  L P+ V+Y  LI G+ K G+   A+
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575

Query: 188 QLYDSMLRNGIMPD 201
            L + M   G  P+
Sbjct: 576 SLLERMEEMGCNPN 589



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 24/224 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A K+  ++ ++GL P++ITY T+I G C   R   A ++F  +   +  PN
Sbjct: 600 LSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPN 659

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LI   C+EG+ D+A ++  +M  KG   + VT++ LIDG+     +  AF +  
Sbjct: 660 LYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 719

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLM--------EEALYAF-------HCALDNHLL-- 164
            M +    PN  +YS+L+ GL K  L+         EA+Y+F       +  + ++LL  
Sbjct: 720 RMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLAR 779

Query: 165 -------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                  P + TY+ L+ G C+ GR  EA QL   M   G  PD
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 823



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 108/205 (52%), Gaps = 4/205 (1%)

Query: 1   MLIKECHLDAALK----LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C  +  ++       +++  G    + + NT++        ++ A  L++++   
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            ++P+ +TF  LI+   K+G++ +A ++ S++ +     +V TY+ LI G+ +++N+  A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V++ M +    PN V+YS LI+GLC  G ++EAL      ++  + P V TY + I  
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
            C      EA++L   M + G  P+
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPN 379



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 105/259 (40%), Gaps = 59/259 (22%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +  R   P++ TY+++I G C   + DEA  L +++    L P+ +TFT LID
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG------------------------ 106
            F   GR+D A ++  +M++ G K N  TYS L+ G                        
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSP 763

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA--------------- 151
           + K  N +   ++   M E    P + +YS L+ GLC++G   EA               
Sbjct: 764 HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 823

Query: 152 --------------------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
                               L  FH          +  Y  LI   CKAG+  EA  L+D
Sbjct: 824 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883

Query: 192 SMLRNGIMPDGLLLSTLAD 210
           +ML      D ++ + L D
Sbjct: 884 NMLEKEWNADEIVWTVLVD 902



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 94/190 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ + +    L  ++++ G EP + TY+T++ G C   R  EA QL + +      P+  
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  L+ A CK   +D A  +F  +  KG + ++  Y  LI    K+  ++ A  +++ M
Sbjct: 826 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   + + + +++L+DGL K G ++  +   H     +  P++ TY IL R   + G+ 
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKS 945

Query: 184 TEAMQLYDSM 193
            E+  L D +
Sbjct: 946 IESEPLADKL 955



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 24/218 (11%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGY---CSLNRLDEAVQ---------------- 48
           +D A  L  ++ D G +P+  TY+ ++ G    C L     AVQ                
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770

Query: 49  -----LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
                L  +++ +  +P   T++ L+   C++GR  +A  +   M E+G   +   Y  L
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           +  + K+  +  A  ++  +       ++  Y  LI  LCK G +EEA   F   L+   
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             D + + +L+ G  K G     M+L   M      P+
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPN 928



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 100 YSC--LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           YSC  L+    K + ++ A ++Y++M  + I P++++++ LI+ L K+G + EA      
Sbjct: 206 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 265

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                L PDV TY  LI G+C+      A  ++D M++ G  P+ +  STL +
Sbjct: 266 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 318


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +M+DA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A      M++  I  D +  + L
Sbjct: 326 DLETAXXYRKRMIKENIRLDDVAYTAL 352



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++++A +LFE++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+  A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 111/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +LF ++ D GL P+ +T+ T+I G+C   R+  A+++++++    L P+
Sbjct: 216 LCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++A    +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGYVP 414



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M+ A +++EEM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +  A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L++ ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A    +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  + A   L  ++ DR ++PD+  + T+I G+     LDEA+++F+ +    + P 
Sbjct: 460 LCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPG 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  FCK G+M DA    ++M       +  TYS +IDGY K  +M SA  ++ 
Sbjct: 520 IVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFG 579

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M ++   PN+++Y+ LI+G CK+  M  A   F       L+P+VVTY  L+ G+ KAG
Sbjct: 580 QMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAG 639

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P  A  +++ ML NG +P+
Sbjct: 640 KPERATSIFELMLMNGCLPN 659



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 105/190 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++  ++ + G  PDI TYN +I   C   R++EA +L EK     L PN  ++T L+ 
Sbjct: 329 AAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMH 388

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK+G    A+ M  ++ E G K+++V+Y   I G   +  +  A  V E+M E  + P
Sbjct: 389 AYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFP 448

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +   Y+IL+ GLCK+G +          LD ++ PDV  +A LI G+ + G   EA++++
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508

Query: 191 DSMLRNGIMP 200
             ++R G+ P
Sbjct: 509 KVIIRKGVDP 518



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 97/175 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+   LD A+K+F  +  +G++P I+ YN +I G+C   ++ +A+    ++  V   P+
Sbjct: 495 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPD 554

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ +ID + K+  M  A  MF +M++   K NV+TY+ LI+G+ K  +M  A  V+ 
Sbjct: 555 EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFS 614

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            M   ++ PN+V+Y+ L+ G  K G  E A   F   L N  LP+  T+  LI G
Sbjct: 615 GMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING 669



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 102/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL +  ++ ++G+ PD   YN ++ G C   R+     L  ++    ++P+   F  
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFAT 490

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F + G +D+A  +F  ++ KG    +V Y+ +I G+ K   M  A     EM   +
Sbjct: 491 LIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVH 550

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+  +YS +IDG  K+  M  AL  F   + +   P+V+TY  LI G+CK      A 
Sbjct: 551 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAE 610

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +++  M    ++P+ +  +TL
Sbjct: 611 KVFSGMKSFDLVPNVVTYTTL 631



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 110/202 (54%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ A+  LF ++ + G + D+++Y   I G      +D A+ + EK+    + P++  + 
Sbjct: 396 YVKASGMLF-RIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYN 454

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+   CK+GR+    ++ S+ML++  + +V  ++ LIDG+ ++  +  A  +++ +   
Sbjct: 455 ILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRK 514

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P IV Y+ +I G CK G M +AL   +     H  PD  TY+ +I GY K    + A
Sbjct: 515 GVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSA 574

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           ++++  M+++   P+ +  ++L
Sbjct: 575 LKMFGQMMKHKFKPNVITYTSL 596



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 81/162 (50%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P ++ YN II GYC    L  A +   +L    + P   T+  LI+ FCK G  +    +
Sbjct: 238 PHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQL 297

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            ++M  +G   NV  ++ +ID  +K   +  A ++   M E    P+I +Y+I+I+  CK
Sbjct: 298 LTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCK 357

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            G +EEA      A +  LLP+  +Y  L+  YCK G   +A
Sbjct: 358 GGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKA 399



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    +A  +L  ++  RGL  ++  +N +I        + EA ++  ++  +   P+  
Sbjct: 287 KAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDIT 346

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+I+  CK GR+++A  +  K  E+G   N  +Y+ L+  Y K  +   A  +   +
Sbjct: 347 TYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRI 406

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++VSY   I G+   G ++ AL      ++  + PD   Y IL+ G CK GR 
Sbjct: 407 AEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRI 466

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                L   ML   + PD  + +TL D
Sbjct: 467 PAMKLLLSEMLDRNVQPDVYVFATLID 493



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A +   +L  +G+ P + TY  +I G+C     +   QL  ++    L  N  
Sbjct: 252 KKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVK 311

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  +IDA  K G + +A  M  +M E G   ++ TY+ +I+   K   ++ A ++ E+ 
Sbjct: 312 VFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKA 371

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  SY+ L+   CK+G   +A        +     D+V+Y   I G   AG  
Sbjct: 372 KERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEI 431

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             A+ + + M+  G+ PD  +      YN+  SG
Sbjct: 432 DVALMVREKMMEKGVFPDAQI------YNILMSG 459



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 49/248 (19%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  + +ALK+FGQ+     +P++ITY ++I G+C    +  A ++F  +    L PN 
Sbjct: 566 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNV 625

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI------------------ 104
           +T+T L+  F K G+ + AT +F  ML  G   N  T+  LI                  
Sbjct: 626 VTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDS 685

Query: 105 -----------------DGYF--------------KSQNMKSAFDVYEEMCENNISPNIV 133
                            DG+               K   + +A  +  +M       + V
Sbjct: 686 KENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSV 745

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ L+ GLC +G  +E      C L+   L   V Y++ +  Y   GR +EA  +  ++
Sbjct: 746 CFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTL 805

Query: 194 LRNGIMPD 201
           + +    D
Sbjct: 806 VEDSKFSD 813



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 5/181 (2%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILIDAFCKEGRMDDA 81
           L+P    ++ +I  Y     LD A+QLF  +  +    P  +   +L++   K G++D A
Sbjct: 126 LKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVA 185

Query: 82  TMMFSKMLEK----GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
             ++ KML+     G   +  T S ++ G      ++    + +        P++V Y++
Sbjct: 186 LQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNM 245

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +IDG CK+G ++ A  A +      +LP V TY  LI G+CKAG      QL   M   G
Sbjct: 246 IIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305

Query: 198 I 198
           +
Sbjct: 306 L 306



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 7/197 (3%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            LK F   + R      D + +++++    S     E   + E +    LKP    F+ L
Sbjct: 77  GLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSAL 136

Query: 69  IDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           I A+ + G +D A  +F  + E        V  + L++G  KS  +  A  +Y++M + +
Sbjct: 137 ILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTD 196

Query: 128 ISPNIV----SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                V    + SI++ GLC  G +EE             +P VV Y ++I GYCK G  
Sbjct: 197 DGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDL 256

Query: 184 TEAMQLYDSMLRNGIMP 200
             A +  + +   G++P
Sbjct: 257 QCATRALNELKMKGVLP 273


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGCMP 414



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGCMPSVVT 418


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 1/192 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LF  L  RGL PD ITY+T++ G+   NRLD A+ L +++   +++P+++ +  
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 68  LIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           L+    + G  + A  ++ +++ + G   N+ TY+ ++DG  K    K A DV+E M  N
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  P++++Y  +I GLC+   ++ A   +   +   L+PDVV Y  L++G+C AGR  EA
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 187 MQLYDSMLRNGI 198
            + +DSM  +GI
Sbjct: 355 WKFWDSMSVSGI 366



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 111/189 (58%), Gaps = 1/189 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R + P++ TYN ++   C    LD AV LF+ L C  L P+ IT++ L+  F K  R+D+
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDN 212

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILI 139
           A  +  +M     + + V Y+ L+ G F++   + A  V+E++  +   SPN+ +Y++++
Sbjct: 213 ALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVML 272

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLCK G+ +EA   +   + N+  PD++TY  +I G C++     A ++Y  M++ G++
Sbjct: 273 DGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLV 332

Query: 200 PDGLLLSTL 208
           PD ++ ++L
Sbjct: 333 PDVVIYNSL 341



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 1/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + +L++  +    G E D  +Y+++I G C   RLD+AV+L+EK++    KPNS  +  L
Sbjct: 422 NKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNAL 481

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  +  DA  ++S+M E       +TY+ LI G  K++    A     EM E   
Sbjct: 482 INGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGC 541

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++ +Y  LI GLC+   ++ AL  ++  LD  L  DVV + ILI G C AG+  EA Q
Sbjct: 542 MLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQ 601

Query: 189 LYDSML-RNGIMPDGLLLSTLAD 210
           L   M  +N   P+ +  +TL D
Sbjct: 602 LLSEMKEKNNCCPNVVTYNTLMD 624



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++++ Q+ +    P  ITYNT+I G C   +  EA +   ++       +  T+  LI 
Sbjct: 494 AIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIR 553

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNIS 129
             C++ ++D A  +++++L+KG + +VV ++ LI G   +  +  A  +  EM E NN  
Sbjct: 554 GLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCC 613

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ L+DG  + G  ++A   +   L+N L+PD+++Y   I+G C   R  E +QL
Sbjct: 614 PNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQL 673

Query: 190 YDSMLRNGIMPDGLLLSTL 208
            + ML +GI+P  +  + L
Sbjct: 674 LNEMLASGIIPTAITWNIL 692



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 1/195 (0%)

Query: 8   LDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A  L+  L  D  L PD++T++T+I G C     ++++Q+ E+      + +  +++
Sbjct: 385 VDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYS 444

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I   CK+GR+DDA  ++ K+     K N   Y+ LI+G+ ++     A  VY +M EN
Sbjct: 445 SMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN 504

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + SP  ++Y+ LI GLCK     EA       L+   + DV TY  LIRG C+  +   A
Sbjct: 505 DCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGA 564

Query: 187 MQLYDSMLRNGIMPD 201
           + L++ +L  G+  D
Sbjct: 565 LALWNQILDKGLQTD 579



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 112/209 (53%), Gaps = 3/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKP 60
            +K   LD AL L  ++    ++PD + YN ++ G       ++A++++E+L       P
Sbjct: 204 FVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASP 263

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+ +++D  CK G   +A  ++ +M+    + +++TY  +I G  +S ++ SA  VY
Sbjct: 264 NLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVY 323

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  + P++V Y+ L+ G C  G + EA + F  ++    + +V +Y I+++G    
Sbjct: 324 SEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA-WKFWDSMSVSGIRNVTSYNIMLKGLFDG 382

Query: 181 GRPTEAMQLYDSMLR-NGIMPDGLLLSTL 208
           G   +A  L++ + + + + PD +  ST+
Sbjct: 383 GMVDKATDLWELLEKDDSLSPDMVTFSTM 411



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 101/180 (56%), Gaps = 6/180 (3%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E +L+A+ +   ++ ++G   D+ TY ++I G C   ++D A+ L+ ++    L+ + + 
Sbjct: 524 EKYLEAS-RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG---PKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ILI   C  G++D+A+ + S+M EK    P  NVVTY+ L+DG++++     A  ++ 
Sbjct: 583 HNILIHGLCSAGKVDEASQLLSEMKEKNNCCP--NVVTYNTLMDGFYETGCFDKAASLWM 640

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + EN + P+I+SY+  I GLC      E +   +  L + ++P  +T+ IL+R   K G
Sbjct: 641 AILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAF----HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +P + S++ L+D   +     +A   F    H A    + P++ TY I++R  C  G   
Sbjct: 117 NPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLD 176

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A+ L+DS+   G+ PD +  STL
Sbjct: 177 RAVTLFDSLRCRGLAPDRITYSTL 200


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 109/194 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HLD AL  F  +   GL PD + Y  ++ GYC    + EA+++ +++       + I + 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++  CKE  + DA  +F +M+E+G   +  T++ LI G+ +  NM  A  ++  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI P+IV+Y+ LIDG CK G ME+A   +   +   + P+ +TY ILI  YC  G  +EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 187 MQLYDSMLRNGIMP 200
            +L+D M+  GI P
Sbjct: 301 FRLWDVMIEKGIKP 314



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 112/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALK+  ++ ++G   D+I YNTI+ G C    L +A +LF+++      P+  TFT LI 
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 219

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++G M  A  +F  M ++  K ++V Y+ LIDG+ K   M+ A ++++ M    I P
Sbjct: 220 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 279

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y ILI+  C  G + EA   +   ++  + P +VT   +I+GYC++G  ++A +  
Sbjct: 280 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 339

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  G+ PD +  +TL
Sbjct: 340 GRMIAKGVAPDHISYNTL 357



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 120/211 (56%), Gaps = 3/211 (1%)

Query: 1   MLIKECHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +L++ C  D    A ++FG++  +G+ PD++++++++  +     LD+A+  F  +    
Sbjct: 77  LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFG 136

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+++ +T+L+  +C+ G M +A  +  +MLE+G   +V+ Y+ +++G  K + +  A 
Sbjct: 137 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 196

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +++EM E    P+  +++ LI G C+ G M +AL  F      ++ PD+V Y  LI G+
Sbjct: 197 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 256

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CK G   +A +L+D M+   I P+ +    L
Sbjct: 257 CKVGEMEKASELWDGMISRKIFPNHITYGIL 287



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 108/194 (55%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + GL PD  TYNT++   C  +   EA ++F ++    + P+ ++F+ L+  F +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A + F  M + G   + V Y+ L+ GY ++ NM  A  + +EM E     ++++Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            +++GLCK  ++ +A   F   ++   LPD  T+  LI G+C+ G  T+A+ L+ +M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 197 GIMPDGLLLSTLAD 210
            I PD +  +TL D
Sbjct: 241 NIKPDIVAYNTLID 254



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L+ A ++   + D+GL+P + TYN II G C   R   A  +  ++  + L P++ 
Sbjct: 13  REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 72

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C+     +A  +F +ML +G   ++V++S L+  + +++++  A   + +M
Sbjct: 73  TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDM 132

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y++L+ G C+ G M EAL      L+   + DV+ Y  ++ G CK    
Sbjct: 133 KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 192

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T+A +L+D M+  G +PD    +TL
Sbjct: 193 TDADKLFDEMVERGALPDFYTFTTL 217



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 93/173 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A KLF ++ +RG  PD  T+ T+I G+C    + +A+ LF  +T   +KP+
Sbjct: 186 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 245

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  LID FCK G M+ A+ ++  M+ +    N +TY  LI+ Y    ++  AF +++
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            M E  I P +V+ + +I G C+ G   +A       +   + PD ++Y  LI
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 97/182 (53%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++TYNT+I  YC    L+EA ++   +    LKP+  T+  +I+  CK+GR   A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +ML  G   +  TY+ L+    +  N   A +++ EM    + P++VS+S L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++AL  F       L+PD V Y +L+ GYC+ G   EA+++ D ML  G + D +  +
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 207 TL 208
           T+
Sbjct: 181 TI 182



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 90/144 (62%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ ++  AL LFG +T R ++PDI+ YNT+I G+C +  +++A +L++ +   ++ PN I
Sbjct: 223 QDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 282

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+A+C  G + +A  ++  M+EKG K  +VT + +I GY +S +   A +    M
Sbjct: 283 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 342

Query: 124 CENNISPNIVSYSILIDGLCKRGL 147
               ++P+ +SY+ LI+   +R +
Sbjct: 343 IAKGVAPDHISYNTLINDGKRRSV 366


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 1/211 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL +F  +   G+EP++  YN II G C   R+DEA+ LF+++   ++ P+ +T+ 
Sbjct: 232 QVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYN 291

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILID  CK G++  +  +  +M   G   +++TY+ L+    K+ ++  A  + +E+ + 
Sbjct: 292 ILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQ 351

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN+ +Y+ LIDGLCK G +E+A   F   L       V TY ++I G CK G   EA
Sbjct: 352 GIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEA 411

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + L   M  N  +PD +   T+  Y L   G
Sbjct: 412 LALLSRMEDNACIPDAVSYETII-YALSEKG 441



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 111/203 (54%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C +         L    +  D++ Y+TII   C    + +A +L+ ++    + PN  TF
Sbjct: 126 CKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +IL+DA CK+ +   A  + + M++KG K NVVTY  ++DGY     +  A +++  M +
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + PN+  Y+I+I+GLCK+  ++EA+  F       + PDVVTY ILI G CK G+ + 
Sbjct: 246 EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIST 305

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           +++L D M   G   D +  ++L
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSL 328



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 121/214 (56%), Gaps = 3/214 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+ LF ++  + + PD++TYN +I G C L ++  +++L +++  +    +
Sbjct: 262 LCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVD 321

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L+ A CK   +D A  +  ++ ++G + NV TY+ LIDG  K   ++ A+ +++
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+        + +Y+++I+GLCK+GL +EAL       DN  +PD V+Y  +I    + G
Sbjct: 382 EILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441

Query: 182 RPTEAMQLYDSMLRNGI---MPDGLLLSTLADYN 212
              +  +L  +M+  G+   +   + ++T+AD N
Sbjct: 442 ETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLN 475



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 32/232 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A+ LF QL   G++P I+T   ++  YC    +     +  K+  +  +PN
Sbjct: 20  LVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPN 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--------------------------- 94
           SITFT LI   C  G+  +A +    ++  G K                           
Sbjct: 80  SITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR 139

Query: 95  -----ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
                A+VV YS +ID   K + +  A+ +Y EM    I PN+ ++SIL+D LCK    +
Sbjct: 140 KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGK 199

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +A+      +   + P+VVTY  ++ GYC   +  +A+ +++ M++ G+ P+
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPN 251



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 3/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL     +   G + D ++Y  ++ G C +     A+Q+  K     +  + + ++ +ID
Sbjct: 99  ALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIID 155

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK   + DA  ++S+M+ KG   NV T+S L+D   K +  K A ++   M +  + P
Sbjct: 156 SLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKP 215

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y  ++DG C    + +AL  F+  +   + P+V  Y I+I G CK  R  EAM L+
Sbjct: 216 NVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLF 275

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M    I PD +  + L D
Sbjct: 276 KEMHWKKINPDVVTYNILID 295



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 3/186 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I+ +N I+     +N    A+ LF +L    +KP+ +T TIL++ +C  G +     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            +K+L+ G + N +T++ LI G   +     A   ++ +  +    + VSY+IL++GLCK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G    A+        N    DVV Y+ +I   CK    T+A +LY  M+  GI P+   
Sbjct: 128 MGETRAAMQMLRKTWVN---ADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 205 LSTLAD 210
            S L D
Sbjct: 185 FSILVD 190


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L  A  L   +  +GL P+  TYN ++CGYC L  L EA ++ E +T   L P 
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +L++ FC +G++D+A  +  +M +     +VVTY+ LIDG  + ++    + + E
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +  N V+Y+I++  +CK+G M EA        +N L PD VTY  LI  YCKAG
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A ++ D M   G+  D   L+T+
Sbjct: 438 KMGKAFRMMDEMTSKGLKIDTWTLNTI 464



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 113/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  A     ++ + GL PD +TYNT+I  YC   ++ +A ++ +++T   LK ++ 
Sbjct: 400 KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTW 459

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++   C E ++D+A  +     ++G   + V+Y  LI GYFK +    A ++++EM
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM 519

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+ ++Y+ +I GLC+   +++A+   +  L+N L+PD  TY I+I G+C  G  
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q ++ M+ N   PD
Sbjct: 580 EKAFQFHNEMIENLFKPD 597



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 104/197 (52%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD A  L    + RG   D ++Y  +I GY    + D A+ L++++   Q+ P++IT
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +I   C+  ++D A    ++MLE G   +  TY+ +I G+    N++ AF  + EM 
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           EN   P++ + +IL+ GLC+ G++E+AL  F+  +      DVVTY  +I   CK G+  
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650

Query: 185 EAMQLYDSMLRNGIMPD 201
            A  L   M    + PD
Sbjct: 651 NAYDLLTEMEAKKLGPD 667



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 116/213 (54%), Gaps = 3/213 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTI---ICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           A ++F ++      P+++T NT+   +  Y S + +  A Q+ +    + + PN+ +F I
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C E ++ DA    +KM E G   + V+Y+ ++D   K + ++ A D+  +M    
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SPN  +Y++L+ G C+ GL++EA         N+LLP V TY +L+ G+C  G+  EA 
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++ D M +  ++PD +  +TL D   Q   S E
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSE 371



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 101/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++  ++    + PD++TYNT+I G        E   L E++    +K N++T+ I
Sbjct: 334 IDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNI 393

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   CK+G M +AT    KM E G   + VTY+ LI  Y K+  M  AF + +EM    
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG 453

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +  + + ++  LC    ++EA      A     + D V+Y ILI GY K  +   A+
Sbjct: 454 LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRAL 513

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+D M    IMP  +  +++
Sbjct: 514 NLWDEMKERQIMPSTITYNSV 534



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 98/193 (50%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL L+ ++ +R + P  ITYN++I G C   ++D+A+    ++    L P+  T+ I+
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNII 569

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  FC EG ++ A    ++M+E   K +V T + L+ G  +   ++ A  ++  +     
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGK 629

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++V+Y+ +I  LCK G  E A           L PD  TY ++I     AGR  EA +
Sbjct: 630 DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689

Query: 189 LYDSMLRNGIMPD 201
               M+ +GI+ D
Sbjct: 690 FTLKMVESGIVHD 702



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 78/144 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+    ++ + GL PD  TYN II G+C    +++A Q   ++     KP+  T  I
Sbjct: 544 VDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNI 603

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C+EG ++ A  +F+ ++ KG   +VVTY+ +I    K    ++A+D+  EM    
Sbjct: 604 LLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKK 663

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA 151
           + P+  +Y ++I  L   G ++EA
Sbjct: 664 LGPDQYTYKVIIAALTDAGRIKEA 687



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 23/167 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+ ALKLF  L  +G + D++TYNTII   C   + + A  L  ++   +L P+
Sbjct: 608 LCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK----------GPKANVVT------------ 99
             T+ ++I A    GR+ +A     KM+E           G   NV+T            
Sbjct: 668 QYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSI 727

Query: 100 -YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            YS  I+        K A  ++ E+ +  ++ N  +Y  L++GL KR
Sbjct: 728 AYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKR 774



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E +++ A +   ++ +   +PD+ T N ++ G C    L++A++LF  L       + +T
Sbjct: 576 EGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVT 635

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +I + CKEG+ ++A  + ++M  K    +  TY  +I     +  +K A +   +M 
Sbjct: 636 YNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMV 695

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+          I+ D   K G  +  L +    +  H     + Y+  I   C   +  
Sbjct: 696 ES---------GIVHDQNLKLGKGQNVLTS---EVSEHFDFKSIAYSDQINELCNQHKYK 743

Query: 185 EAMQLYDSMLRNGI 198
           +AM L+  + + G+
Sbjct: 744 DAMHLFVEVTKEGV 757


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 1/199 (0%)

Query: 14  LFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++ ++ D  L EP+++TY  ++ G C  +++ EA  L E ++    +PN I +  LID F
Sbjct: 265 IYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGF 324

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK G++D+A  +F+KML  G   NV TYS LID  FK + +  A  V  +M EN+ +PN+
Sbjct: 325 CKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNV 384

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V Y+ ++DGLCK G  +EA        +    P+VVTY  +I G+ KAGR    ++L   
Sbjct: 385 VIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQL 444

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M   G  P+ +    L ++
Sbjct: 445 MTSKGCAPNFITYRVLINH 463



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 120/220 (54%), Gaps = 17/220 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  +  ++  +G  PD  TY+ +I   C+ +++++A QLF+++    + P+  T+T 
Sbjct: 103 FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTT 162

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D FCK G ++ A   F +M + G   NVVTY+ LI  Y K++ +  A +++E M  N 
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA--------------FHCALDNHLL-PDVVTY 170
             PNIV+Y+ LIDG CK G  E+A  +YA              +   +D+ L  P+VVTY
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L+ G CKA +  EA  L ++M   G  P+ ++   L D
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALID 322



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 17/220 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +LF ++   G+ PD+ TY T++  +C +  +++A   F+++      PN +T+T 
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A+ K  ++  A  +F  ML  G   N+VTY+ LIDG+ K+   + A  +Y  M  + 
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257

Query: 128 I-----------------SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
           +                  PN+V+Y  L+DGLCK   ++EA             P+ + Y
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             LI G+CK G+  EA +++  ML +G  P+    S+L D
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 98/192 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L   ++  G EP+ I Y+ +I G+C + +LDEA ++F K+      PN
Sbjct: 289 LCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPN 348

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID   K+ R+D A  + +KMLE     NVV Y+ ++DG  K      A+ +  
Sbjct: 349 VYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLML 408

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    PN+V+Y+ +IDG  K G ++  L            P+ +TY +LI   C AG
Sbjct: 409 MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAG 468

Query: 182 RPTEAMQLYDSM 193
              +A +L + M
Sbjct: 469 LLDDAHKLLEEM 480



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 12/221 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD--EAVQLFEK-------LTCVQLKPN 61
           A KL  ++   G +P  + YN +I G CS   L   E + L E+       +  V  K N
Sbjct: 30  AYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVN 89

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT      C  G+ + A  +  +M+ KG   +  TYS +I     +  ++ AF +++
Sbjct: 90  VCNFT---RCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQ 146

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N I+P++ +Y+ L+D  CK GL+E+A   F     +   P+VVTY  LI  Y K  
Sbjct: 147 EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + + A ++++ ML NG +P+ +  + L D + ++  +++ C
Sbjct: 207 KLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKAC 247



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 5/197 (2%)

Query: 23  LEPDIITYNTIICGY----CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           LE  ++     +C +    C + + ++A  +  ++      P+S T++ +I   C   ++
Sbjct: 79  LEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKV 138

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           + A  +F +M   G   +V TY+ L+D + K   ++ A + ++EM ++  +PN+V+Y+ L
Sbjct: 139 EKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTAL 198

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I    K   +  A   F   L N  +P++VTY  LI G+CKAG   +A Q+Y  M  + +
Sbjct: 199 IHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKV 258

Query: 199 -MPDGLLLSTLADYNLQ 214
            +PD  +   + D  L+
Sbjct: 259 DIPDVDIYFRIVDSELK 275



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 3/193 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +L   + ++G  P+++TY  +I G+    R+D  ++L + +T     PN IT+ +L
Sbjct: 401 DEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL 460

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G +DDA  +  +M +     ++  Y  +I+G+  S    ++  +  E+ E+  
Sbjct: 461 INHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGS 518

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P +  Y +LID   K G +E AL   H  L +       TY  LI     A +  +A +
Sbjct: 519 VPILPVYKLLIDNFIKAGRLEMAL-ELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFK 577

Query: 189 LYDSMLRNGIMPD 201
           LY  M R G +P+
Sbjct: 578 LYSDMTRRGFVPE 590



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS---- 115
           P+ + F  L+ A+C+ G    A  +  KM+  G +   V Y+ LI G   ++++ S    
Sbjct: 9   PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVI 68

Query: 116 --AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A   Y EM E  +  N V+       LC  G  E+A       +    +PD  TY+ +
Sbjct: 69  GLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKV 128

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I   C A +  +A QL+  M RNGI PD    +TL D
Sbjct: 129 IGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLD 165



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A+L L  +L++ G  P +  Y  +I  +    RL+ A++L E+L+       + T+  LI
Sbjct: 505 ASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLI 563

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++     ++D A  ++S M  +G    +    CLI G  +    + A  + + +C+ +I
Sbjct: 564 ESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 108/199 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAAL++F ++ +RG  PD  TY T+I G C L ++ EA +LF+++      P  +T+T 
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+   +D A  +  +M  KG K NV TYS L+DG+ KS     A ++ + M    
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+++YS L+ GLCK G ++EA+          L PD   Y  +I G+C   +  EA 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351

Query: 188 QLYDSMLRNGIMPDGLLLS 206
              D M+  GI P+ L  S
Sbjct: 352 NFLDEMVLGGISPNRLTWS 370



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 106/199 (53%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++ +   EP   +Y T+       N+L  A++ +  +  + + P+  +  +LI 
Sbjct: 104 AVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIK 163

Query: 71  AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           A CK  G MD A  +F +M  +G   +  TY  LI+G  +   +  A ++++EM     S
Sbjct: 164 ALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACS 223

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V+Y+ LI GLC+   ++ A+          + P+V TY+ L+ G+CK+G  + A++L
Sbjct: 224 PTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALEL 283

Query: 190 YDSMLRNGIMPDGLLLSTL 208
            D M+    +P+ +  STL
Sbjct: 284 LDMMVSRRHLPNMITYSTL 302



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 14/204 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A++L  ++  +G++P++ TY++++ G+C       A++L + +   +  PN IT++ 
Sbjct: 242 LDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYST 301

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CKEG++ +A  +  +M  +G + +   Y  +I G+        A +  +EM    
Sbjct: 302 LVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGG 361

Query: 128 ISPNIVSYS-------ILIDGLCKRGLMEEALYAFHCALD---NHLLPDVVTYAILIRGY 177
           ISPN +++S       I++ GLC     E    AF   L      +  D  T+  L+  +
Sbjct: 362 ISPNRLTWSLHVRIHNIVVQGLC----TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYF 417

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           C  G   +A  L D M+ +G +PD
Sbjct: 418 CNKGDLHKAAHLVDEMVLDGCIPD 441



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 1/190 (0%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +I   Y  +++  +AV++F K+   + +P+  ++  +      E ++  A   +  M E 
Sbjct: 90  SICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREM 149

Query: 92  GPKANVVTYSCLIDGYFK-SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           G   +V + + LI    K S  M +A  ++ EM      P+  +Y  LI+GLC+ G + E
Sbjct: 150 GIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGE 209

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A   F         P VVTY  LI G C++     A++L + M   GI P+    S+L D
Sbjct: 210 AKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMD 269

Query: 211 YNLQSSGSQE 220
            + +S  S  
Sbjct: 270 GHCKSGCSSR 279



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 1/181 (0%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T++ +I    S N    A +L  ++   +       F  +  A+ +  +  DA  +F KM
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR-GL 147
            E   + +  +Y  +         +K A   Y  M E  I P++ S ++LI  LCK  G 
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M+ AL  F    +    PD  TY  LI G C+ G+  EA +L+  M      P  +  ++
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231

Query: 208 L 208
           L
Sbjct: 232 L 232



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A+++  ++  +GL PD   Y  II G+C + +  EA    +++    + PN
Sbjct: 306 LCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPN 365

Query: 62  SITFT-------ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
            +T++       I++   C E   + A  ++  M  +G   +  T+  L++ +    ++ 
Sbjct: 366 RLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLH 424

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            A  + +EM  +   P+ V+++ ++     R  + E+
Sbjct: 425 KAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRES 461


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 127/223 (56%), Gaps = 3/223 (1%)

Query: 1   MLIKECHLDAALK---LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           M+ K C L  + +   L  ++ +  L PD  +YNT+I G+    +++ A+ +F ++    
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQS 364

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           LKP+  T+T LID +C+ GR D+A  +  +M   G + + +TYS L++GY K   +  A 
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPAL 424

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           D+ + +   +IS N   Y+ILIDG C+ G + +A     C L + + PDV+TY+ LI G 
Sbjct: 425 DLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGM 484

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           CK G   E  ++   M ++G++P+ +L +TL  Y  ++  ++E
Sbjct: 485 CKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 5/212 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A +    L ++    D  T NT++ G C    LDEA+ L EK+    + P++ T+T
Sbjct: 629 HLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYT 688

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE-MCE 125
           IL+D FCK G++  A ++   MLEKG   + + Y+CL++G      +K+A  +++E +C+
Sbjct: 689 ILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 748

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             +  + ++Y+ +++G  K G + E         +N + P   +Y IL+ GY K G+ + 
Sbjct: 749 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 808

Query: 186 AMQLYDSMLRNGIMPDG----LLLSTLADYNL 213
            + LY  M++ GI PD     LL+  L +Y L
Sbjct: 809 TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 840



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 113/204 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  ++ A+ +F Q+  + L+P + TY  +I GYC   R DEA ++  ++    ++P+ +T
Sbjct: 347 EGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELT 406

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ L++ +CK  ++  A  +   +  +    N   Y+ LIDG+ +   +  A  + + M 
Sbjct: 407 YSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCML 466

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I P++++YS LI+G+CK G++ E          + +LP+ V Y  L+  +CKAG   
Sbjct: 467 ADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAK 526

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++ +  + R+G++ + ++ + L
Sbjct: 527 EALKYFVDIYRSGLVANSVIHNAL 550



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 100/189 (52%), Gaps = 1/189 (0%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           DR    D+ T N ++   C+  +L +A  + +K+   +L PN++T+  +++ + K+GR  
Sbjct: 223 DRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCK 281

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +   M + G +A++ TY+ +ID   K +    A+ + + M E N++P+  SY+ LI
Sbjct: 282 SALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLI 341

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            G    G +  A+Y F+  L   L P V TY  LI GYC+ GR  EA ++   M   G+ 
Sbjct: 342 HGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401

Query: 200 PDGLLLSTL 208
           P  L  S L
Sbjct: 402 PSELTYSAL 410



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 70/257 (27%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G++PD+ITY+ +I G C +  + E  ++  ++    + PN++ +T L+  FCK G   +A
Sbjct: 469 GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEA 528

Query: 82  TMMFSKMLEKGPKAN-----------------------------------VVTYSCLIDG 106
              F  +   G  AN                                   V +++C+ID 
Sbjct: 529 LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 588

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALD 160
           Y +  N+  AF VY+ M  +   P+I +Y  L+ GLC+ G + +A      L    CA+D
Sbjct: 589 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 648

Query: 161 -----------------------------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
                                         ++LPD  TY IL+ G+CK G+   A+ L  
Sbjct: 649 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQ 708

Query: 192 SMLRNGIMPDGLLLSTL 208
            ML  G++PD +  + L
Sbjct: 709 MMLEKGLVPDTIAYTCL 725



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 35/228 (15%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A ++  ++   G+ P  +TY+ ++ GYC  ++L  A+ L + L    +  N   +TIL
Sbjct: 386 DEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTIL 445

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID FC+ G +  A  +   ML  G   +V+TYS LI+G  K   +    ++   M ++ +
Sbjct: 446 IDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGV 505

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAF----------HCALDNHLL-------------- 164
            PN V Y+ L+   CK G  +EAL  F          +  + N LL              
Sbjct: 506 LPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ 565

Query: 165 -----------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                       DV ++  +I  YC+ G   EA  +YD+M+R+G  PD
Sbjct: 566 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 613



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 16/215 (7%)

Query: 3    IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            IK+  L   L L+  +   G++PD +TY  +I G C    ++ AV+  EK+    + P++
Sbjct: 801  IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860

Query: 63   ITFTILIDAFCKEGRMDDATMMFSKM-----------LEKGPKA-----NVVTYSCLIDG 106
            + F ILI AF ++ +M +A  +FS M           L++  KA     + V  S ++ G
Sbjct: 861  LAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 920

Query: 107  YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
              K   ++ A  V+  +    + P I +++ L+ GLCK   +++A +         L  D
Sbjct: 921  LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 980

Query: 167  VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            VVTY +LI G C      +A+ LY+ M   G++P+
Sbjct: 981  VVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPN 1015



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 97/184 (52%), Gaps = 1/184 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILI 69
           AL L   + ++GL PD I Y  ++ G  +  ++  A  +F+++ C + L  + I +  ++
Sbjct: 703 ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMM 762

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + + K G++++   +   M E     +  +Y+ L+ GY K   +     +Y +M +  I 
Sbjct: 763 NGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIK 822

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ V+Y +LI GLC+ GL+E A+      +   + PD + + ILI+ + +  + + A+QL
Sbjct: 823 PDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQL 882

Query: 190 YDSM 193
           +  M
Sbjct: 883 FSYM 886



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 36/234 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  H   ALK F  +   GL  + + +N ++C +     + EA Q  + ++ +++  +  
Sbjct: 521 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 580

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY----------------------- 100
           +F  +ID++C+ G + +A  ++  M+  G   ++ TY                       
Sbjct: 581 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 640

Query: 101 ---SCLID---------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              +C ID         G  K   +  A D+ E+M   NI P+  +Y+IL+DG CKRG +
Sbjct: 641 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 700

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML-RNGIMPD 201
             AL      L+  L+PD + Y  L+ G    G+   A  ++  ++ + G+  D
Sbjct: 701 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +D A +L   +   G+ P  +  ++I+ G C   +++EA+ +F  +    + P   TFT 
Sbjct: 892  IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 951

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            L+   CKE ++DDA  +   M   G K +VVTY+ LI G    + +  A D+YEEM    
Sbjct: 952  LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKG 1011

Query: 128  ISPNIVSYSILIDGLCKRGLMEEA 151
            + PNI +Y  L   +   G M++ 
Sbjct: 1012 LLPNITTYITLTGAMYATGTMQDG 1035



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 63/124 (50%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            ++ A+ +F  +   G+ P I T+ T++ G C   ++D+A  L + +    LK + +T+ +
Sbjct: 927  VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNV 986

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            LI   C +  + DA  ++ +M  KG   N+ TY  L    + +  M+    + +++ +  
Sbjct: 987  LITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046

Query: 128  ISPN 131
            I P+
Sbjct: 1047 IVPS 1050



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L KE  +D A  L   +   GL+ D++TYN +I G C+   + +A+ L+E++    L PN
Sbjct: 956  LCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPN 1015

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
              T+  L  A    G M D   +   + ++G
Sbjct: 1016 ITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 119/213 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L  ++   G  PD++TY+++I G        +A +LF+++     KP+SITFT L+D
Sbjct: 168 AMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMD 227

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K GR+DDA  +  +M E+G K  VVTY+ LI G+ K  ++  A+++ +EM  N   P
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+YS LI GL K   ++EA             PD +TY  LI G  KAG   +A +L+
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           D M   G  PD +  STL     +++  +  C+
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACV 380



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A KLF ++  RG +PD IT+  ++       R+D+A++L +++    +KP 
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  F K G + +A  +  +M   G K +VVTYSCLI G  K+  +  A  V +
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+ ++Y+ LI+GL K GL+ +A   F         PDVVTY+ LI    KA 
Sbjct: 314 KMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAA 373

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A  L++ M   GI PD
Sbjct: 374 RVESACVLFEEMESVGIQPD 393



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  LF ++ +RG  PD  TYN++I G   + R  +A++L E++      P+
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI    K+G    A  +F +M  +G K + +T++ L+D   K+  +  A ++ +
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + P +V+Y+ LI G  K G + EA         N   PDVVTY+ LI G  KA 
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA Q+   M + G  PD +  +TL
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTL 330



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 108/221 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL+L  ++ D G  PD+ TYN +I       RL EA  LF ++      P+
Sbjct: 89  LGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPD 148

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  LI    K GR   A  +  +M   G   +V+TYS LI G  K      AF +++
Sbjct: 149 TFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQ 208

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ ++++ L+D L K G +++AL       +  + P VVTY  LI G+ K G
Sbjct: 209 EMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVG 268

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
              EA  L D M RNG  PD +  S L    +++S   E C
Sbjct: 269 DLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 107/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G +PD++TY+ +I G    ++LDEA Q+ +K+      P++IT+  LI+
Sbjct: 273 AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLIN 332

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G ++DA  +F +M  KG   +VVTYS LI    K+  ++SA  ++EEM    I P
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQP 392

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y  +I  L K G +++A   F       L PDV+TY   +    + GR  EA +++
Sbjct: 393 DLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF 452

Query: 191 DSMLRNGIMPD 201
           + M  +G++PD
Sbjct: 453 EDMKESGLLPD 463



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 101/184 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++TYN+++       + +EA  LFE+L   +  P+ ++++ LI++  + G+ + A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            ++M  KG K N+ TY+ L+D   K+     A  +  EM +N   P++ +Y+ LI  L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G + EA   F    +   +PD  TY  LI G  K GR  +AM+L + M R+G  PD + 
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 205 LSTL 208
            S+L
Sbjct: 187 YSSL 190



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 105/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  LF +L      PD+++Y+ +I       + + A+++  ++     KPN
Sbjct: 19  LAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPN 78

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+D   K G+ D+A  + ++M + G   +V TY+CLI    K+  +  AF ++ 
Sbjct: 79  LWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFA 138

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+  +Y+ LI GL K G  ++A+        +   PDV+TY+ LI G  K G
Sbjct: 139 EMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDG 198

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A +L+  M R G  PD +  + L D
Sbjct: 199 ETVKAFKLFQEMKRRGRKPDSITFTALMD 227



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 104/199 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +    +AAL++  ++  +G +P++ TYNT++       + DEA++L  ++      P+
Sbjct: 54  LGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPD 113

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI    K GR+ +A  +F++M E+G   +  TY+ LI G  K    + A ++ E
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++++YS LI GL K G   +A   F         PD +T+  L+    KAG
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  +A++L D M   G+ P
Sbjct: 234 RVDDALELLDEMKERGVKP 252



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 105/202 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK   LD A ++  ++   G  PD ITYNT+I G      L++A +LF+++      P+
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI A  K  R++ A ++F +M   G + ++ TY  +I    K+  +  A  ++ 
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +SP++++Y+  ++ L + G  +EA   F    ++ LLPDV TY  L+ G  K  
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTK 478

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              +A  L   ++  G   D L
Sbjct: 479 EVDDACGLLKELIEQGCAFDSL 500



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +++A  LF ++   G++PD+ TY +II       ++D+A +LF ++    L P+
Sbjct: 369 LGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+   +++  + GR  +A  +F  M E G   +V TY  L+ G  K++ +  A  + +
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E   + + + +   ++ L   G ++EA      A    L P   +Y  LI    KAG
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R +EA    + +   G  PD +  S+L
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSL 575



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 95/198 (47%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A +LF ++  +GL PD+ITYN  +       R  EA ++FE +    L P
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+  L+    K   +DDA  +  +++E+G   + + +   ++      N+  A ++ 
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELL 522

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +      + P   SY+ LID L K G + EA        +    PD+V+Y+ LI    + 
Sbjct: 523 QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582

Query: 181 GRPTEAMQLYDSMLRNGI 198
           G+   A +L + M + G+
Sbjct: 583 GQIDTAFELLEEMSKRGL 600



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 73/145 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  +L ++G   D + ++  +    S   +DEA +L +      L P 
Sbjct: 474 LSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPG 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LIDA  K GR+ +A      + E+G K ++V+YS LI    ++  + +AF++ E
Sbjct: 534 ASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLE 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRG 146
           EM +  +  +  SYS L+  L   G
Sbjct: 594 EMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 58/109 (53%)

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           P  NVVTY+ L++   K+   + A  ++EE+     +P++VSYS LI+ L + G  E AL
Sbjct: 5   PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                       P++ TY  L+    KAG+  EA++L   M  NG +PD
Sbjct: 65  EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPD 113


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 117/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H   A+++   +   GL+PDI TYN++I G C L  ++EAV++ +++      PN
Sbjct: 318 LCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPN 377

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +I + CKE R+D+AT +   +  KG   +V T++ LI G   S N KSA D++E
Sbjct: 378 AVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+  +Y++LID LC    +EEAL        N    +VV Y  LI G+CK  
Sbjct: 438 EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNK 497

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +++D M   G+  D +  +TL D
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLID 526



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A ++   LT +G+ PD+ T+N++I G C  +    A+ LFE++     +P+
Sbjct: 388 LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPD 447

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LID+ C   ++++A  +  +M   G   NVV Y+ LIDG+ K++ ++ A ++++
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +S + V+Y+ LIDGLCK   +E+A       +   L PD  TY  L+  +CK G
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  +  +M  +G  PD +  +TL
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATL 594



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 36/230 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL L  ++   G   +++ YNT+I G+C   R++EA ++F+++    +  +S+T+  
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK  R++DA  +  +M+ +G + +  TY+ L+  + K+ ++K A D+ + M  + 
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 128 ISPNIVSYSILIDGLCKRGLME-----------------------------------EAL 152
            +P+IV+Y+ LI GLCK G ++                                   EA+
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAM 643

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPT-EAMQLYDSMLRNGIMPD 201
             F   LD    PD +TY I+ RG C  G P  EA+     M+  G +P+
Sbjct: 644 RLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE 693



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 106/190 (55%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A+ LF ++  +G  PD  TYN +I   CS  +L+EA+ L +++       N + +  LI
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D FCK  R+++A  +F +M  +G   + VTY+ LIDG  KS+ ++ A  + ++M    + 
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  +Y+ L+   CK G +++A         +   PD+VTYA LI G CKAGR   A +L
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610

Query: 190 YDSMLRNGIM 199
             S+   G++
Sbjct: 611 LRSIQMKGMV 620



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+ +  ++   GL PD  T+ TI+ GY     LD A+++ E++        
Sbjct: 213 LCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCT 272

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  +LI+ FCK+GR+D A     + + +G + +  TY+ L++G  K  + K A +V +
Sbjct: 273 DVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVD 332

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+I +Y+ LI GLCK G +EEA+      +     P+ VTY  +I   CK  
Sbjct: 333 AMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA ++   +   GI+PD
Sbjct: 393 RVDEATEIARLLTSKGILPD 412



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 103/208 (49%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+  +LD AL++  Q+ + G     +T N +I G+C   R+D+A+   ++      +P+ 
Sbjct: 249 IEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQ 308

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  L++  CK G    A  +   ML  G   ++ TY+ LI G  K   ++ A  + ++
Sbjct: 309 FTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQ 368

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   + SPN V+Y+ +I  LCK   ++EA           +LPDV T+  LI+G C +  
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              AM L++ M   G  PD    + L D
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLID 456



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 90/179 (50%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           ++PD   YN ++      N+L         +   +++ +  TF ILI A CK  ++  A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           +M  +M   G   +  T++ ++ GY +  N+  A  + E+M E       V+ ++LI+G 
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           CK+G +++AL     A+     PD  TY  L+ G CK G    AM++ D+ML  G+ PD
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 93/186 (50%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +  R +  D+ T+N +I   C  +++  A+ + E++    L P+  TFT ++  + + G 
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +D A  +  +M+E G     VT + LI+G+ K   +  A    +E       P+  +Y+ 
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L++GLCK G  + A+      L   L PD+ TY  LI G CK G   EA+++ D M+   
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 198 IMPDGL 203
             P+ +
Sbjct: 374 CSPNAV 379



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 1/197 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   GL PD  TYN+++  +C    + +A  + + +T     P+
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK GR+  A+ +   +  KG       Y+ +I   FK      A  ++ 
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM + +  P+ ++Y I+  GLC   G + EA+      ++   +P+  ++ +L  G C  
Sbjct: 648 EMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL 707

Query: 181 GRPTEAMQLYDSMLRNG 197
                 ++L D ++   
Sbjct: 708 SMDDTLVKLVDMIMEKA 724


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 110/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  LF Q+   GL PDI+TYN++I GY  L  LDE+  LFE++  V  +P+ I
Sbjct: 264 KEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVI 323

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK  +M  A     +M   G K NVVTYS LID   K   ++ A     +M
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDM 383

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +SPN  +Y+ LID  CK G + +AL      L   +  +VVTY  L+ G CK GR 
Sbjct: 384 RRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRM 443

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  L+ +M++ G+ P+
Sbjct: 444 MEAEDLFRAMIKAGVTPN 461



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 1/215 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD +  LF ++ D G EPD+ITYN +I  +C   ++ +A     ++    LKPN +T++ 
Sbjct: 303 LDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYST 362

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CKE  +  A      M   G   N  TY+ LID   K+  +  A  + +EM +  
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N+V+Y+ L+DGLCK G M EA   F   +   + P++ TY  L+ G+ K  R   A+
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +L   +    I PD LL  T+  + L S    E C
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTII-WGLCSQNKLEEC 516



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 121/220 (55%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  LF  +   G+ P++ TY  ++ G+    R++ A++L +++   ++KP+
Sbjct: 437 LCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPD 496

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I   C + ++++   + S+M   G +AN V Y+  +D YFK+     A ++ +
Sbjct: 497 LLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQ 556

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKA 180
           EMC+  +   IV++ +LIDGLCK+GL+EEA+  F    D +L P +V     LI G CK 
Sbjct: 557 EMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKN 616

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
                A +L+D M    ++PD +  + L D NL+    QE
Sbjct: 617 NYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQE 656



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 108/214 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A     ++ + GL+P+++TY+T+I   C  + L +A++    +  V L PN  T+T
Sbjct: 337 QMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYT 396

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA CK G + DA  +  +ML+     NVVTY+ L+DG  K   M  A D++  M + 
Sbjct: 397 SLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKA 456

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++PN+ +Y+ L+ G  K   +E AL       +  + PD++ Y  +I G C   +  E 
Sbjct: 457 GVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEEC 516

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +   M   GI  + ++ +   D   ++  + E
Sbjct: 517 EFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVE 550



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 20/235 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A+K    +   GL P+  TY ++I   C    L +A++L +++  VQ+  N
Sbjct: 367 LCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFN 426

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+D  CKEGRM +A  +F  M++ G   N+ TY+ L+ G+ K++ +++A ++ +
Sbjct: 427 VVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLK 486

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E  I P+++ Y  +I GLC +  +EE  +         +  + V Y I +  Y K G
Sbjct: 487 EIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTG 546

Query: 182 RPTEAMQLYDSM--------------LRNGIMPDGLL------LSTLADYNLQSS 216
           +  EA+ L   M              L +G+   GL+       + +AD+NLQ +
Sbjct: 547 KTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPN 601



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 1/178 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++ Y TII G CS N+L+E   +  ++    ++ NS+ +TI +DA+ K G+  +A  +
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY-SILIDGLC 143
             +M + G +  +VT+  LIDG  K   ++ A D +  M + N+ PN V+  + LIDGLC
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC 614

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           K   +E A   F    D +++PD + Y  LI G  K     EA+ +   M   G+  D
Sbjct: 615 KNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELD 672



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 107/209 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A + F ++T   + P   + N  +       + D + + F  +    +  +  T+ I
Sbjct: 198 LEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNI 257

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CKEG M  A  +F +M + G   ++VTY+ LIDGY K   +  +F ++EEM +  
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y+ LI+  CK   M +A +  H   ++ L P+VVTY+ LI   CK     +A+
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +    M R G+ P+    ++L D N ++ 
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAG 406



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 1/187 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF-TILI 69
           AL L  ++ D G+E  I+T+  +I G C    ++EA+  F ++    L+PN++   T LI
Sbjct: 551 ALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALI 610

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  CK   ++ A  +F +M +K    + + Y+ LIDG  K ++ + A ++   M E  + 
Sbjct: 611 DGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGME 670

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++ +Y+ L+ GL +  L+++A    +  +   ++PD +    L+R Y + G   EA++L
Sbjct: 671 LDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730

Query: 190 YDSMLRN 196
           +D +L+ 
Sbjct: 731 HDELLKK 737



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 94/186 (50%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +   +  L  L+EA Q F ++T  ++ P + +    +    K G+ D +   
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+  G   +V TY+ +I    K  +M +A  ++ +M +  ++P+IV+Y+ LIDG  K
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL++E+   F    D    PDV+TY  LI  +CK  +  +A      M  +G+ P+ + 
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 205 LSTLAD 210
            STL D
Sbjct: 360 YSTLID 365



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 63/122 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +++AA KLF ++ D+ + PD I Y  +I G        EA+ +  +++ + ++ +
Sbjct: 613 LCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELD 672

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T L+    +   +  A M  ++M+ KG   + +    L+  Y++  ++  A ++++
Sbjct: 673 LHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHD 732

Query: 122 EM 123
           E+
Sbjct: 733 EL 734


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY     LDE   L   +    ++P+  
Sbjct: 135 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVY 194

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 255 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDL 314

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 315 DSAFEHRKRMIQENIRLDEVAYTAL 339



 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 112/200 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD    L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 169 IRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 228

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +E
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LI+G CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 289 MSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGR 348

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
             +A ++   ML  G+ PD 
Sbjct: 349 SVDAEKMLREMLSVGLKPDA 368



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 203 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 262

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LI+G  K  ++ SAF+  +
Sbjct: 263 LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRK 322

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI G C+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 323 RMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXG 382

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                 +L   M R+G +P      ++  YN+  +G
Sbjct: 383 DVWXGSKLLKEMQRDGHVP------SVVTYNVLMNG 412



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 98  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 158 VVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 217

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 218 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 277

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  L D M   G+ PD +  +TL
Sbjct: 278 DLKQAHHLIDEMSVKGLKPDKITYTTL 304



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 76/126 (60%)

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + ++LE G  A++  ++ L+  + K  +++ A  V++ + +  + P++VSY+ L++G  +
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 170

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G ++E        L + + PDV TY++LI G CK  +  +A +L+D ML  G++P+G+ 
Sbjct: 171 XGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230

Query: 205 LSTLAD 210
            +TL D
Sbjct: 231 FTTLID 236



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 62/145 (42%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 55  VFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 114

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 115 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDL 174

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E   L   ML +G+ PD    S L
Sbjct: 175 DEGFXLKSXMLASGVQPDVYTYSVL 199


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 120/209 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD AL  F ++  +G++ ++ TYN++I  +CS  R D+  QL   +   ++ PN
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LID+  KEG++ +A  ++++M+ +G + N +TY+ LI G    + +  A  + +
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+I +Y+ILI+G CK   +++ +  F       ++ D VTY+ LI+G+C++ 
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSR 454

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A +++  M+  G+ P  +  + L D
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLD 483



 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +  +AL L  ++  R ++P ++TY  II   C   RLD+A+  F ++    +K N  
Sbjct: 242 KSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF 301

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI +FC  GR DD   +   M+ +    NVVT+S LID   K   +  A D+Y EM
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN ++Y+ LI GLC    ++EA       +     PD+ TY ILI G+CKA + 
Sbjct: 362 ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV 421

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            + M+L+  M   G++ D +  STL
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTL 446



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 103/195 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A+ L  ++   G +P+  TY  I+   C       A+ L  K+   ++KP+ +T+T
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID  CK+GR+DDA   FS+M  KG KANV TY+ LI  +           +  +M   
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN+V++S LID L K G + EA   ++  +   + P+ +TY  LI G C   R  EA
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389

Query: 187 MQLYDSMLRNGIMPD 201
            Q+ D M+  G  PD
Sbjct: 390 NQMMDLMVSKGCDPD 404



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 109/207 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  A    G++   G EP+ +T+NT++ G C   R+ EAV+L + +   Q  P+ I
Sbjct: 137 RRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLI 196

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   +++  C + R+ +A  + ++M+  G + N  TY  +++   KS N  SA D+  +M
Sbjct: 197 TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM 256

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y+I+ID LCK G +++AL  F       +  +V TY  LI  +C  GR 
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  QL   M+   I P+ +  S L D
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALID 343



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 121/211 (57%), Gaps = 2/211 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A ++   +  +G +PDI TYN +I G+C   ++D+ ++LF K++   +  +++T++
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC+  ++  A  +F +M+ +G    ++TY+ L+DG   +  ++ A  + ++M + 
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTE 185
            +  +I  Y+I+I G+C    +++A ++  C+L +  +  D+ +Y I++ G CK    +E
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDA-WSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           A  L+  M  +G  PDG   +TL   +L+ +
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTLIRAHLRGN 594



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 2/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  ++LF +++ RG+  D +TY+T+I G+C   +L  A ++F+++    + P  +
Sbjct: 417 KAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM 476

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G +++A  +  +M +   + ++  Y+ +I G   +  +  A+ ++  +
Sbjct: 477 TYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSL 536

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  +I SY+I++ GLCKR  + EA   F    ++   PD  TY  LIR + +    
Sbjct: 537 PSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDI 596

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           T ++QL + M R G   D   +  + D  + SSG
Sbjct: 597 TTSVQLIEEMKRCGFSSDASTVKIVMD--MLSSG 628



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 79/158 (50%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
           D+AV LF+ +   +  P  I F  L     +  + D    +  +M  KG   ++ T + +
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           I+ + + + +  AF    ++ +    PN V+++ L++GLC  G + EA+    C + +  
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +PD++T   ++ G C   R +EA+ L   M+ NG  P+
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPN 229



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 88/192 (45%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF  +      P +I +N +        + D  + L +++    +  +  T  I+
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC+  ++  A     K+ + G + N VT++ L++G      +  A ++ + M  +  
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++++ + +++GLC +  + EA+      + N   P+  TY  ++   CK+G    A+ 
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 189 LYDSMLRNGIMP 200
           L   M    I P
Sbjct: 252 LLRKMEHRKIKP 263



 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  LF ++ + G EPD  TYNT+I  +   N +  +VQL E++       +
Sbjct: 555 LCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSD 614

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
           + T  I++D     G +D +   F  ML  GP
Sbjct: 615 ASTVKIVMDML-SSGELDKS---FLNMLS-GP 641


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  ++   G  PD++TYN++I GY     L+E  +L  ++     +P+
Sbjct: 204 LCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPD 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L++ FCK GRM+ A   F++M  +G  ANVVT+S  +D + K+  ++ A  ++ 
Sbjct: 264 VVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFA 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN V+Y+ L+DG CK G +++AL   +  +   +  +VVTY +L+ G CK G
Sbjct: 324 QMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEG 383

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  ++  M R GI  + LL +TL
Sbjct: 384 KVAEAEDVFRLMERAGIRANELLYTTL 410



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   KL G++   G  PD++TYN ++  +C   R++ A   F ++    +  N +TF+ 
Sbjct: 245 LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFST 304

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            +DAFCK G + +A  +F++M  KG K N VTY+CL+DG  K+  +  A  +  EM +  
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG 364

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N+V+Y++L+DGLCK G + EA   F       +  + + Y  LI G+        A+
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERAL 424

Query: 188 QLYDSMLRNGIMPD 201
            L   M   G+  D
Sbjct: 425 SLLSEMKDKGMELD 438



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 109/193 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL L  ++ D+G+E D+  Y  +I G C+L +LDEA  L  K+    LKPN++ +T +
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DA  K  +  +A  +  KM++ G + N+VTY  L+DG  K+ ++  A   + +M +  +
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGL 540

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+ +Y+ L+DGLCK G +++A+      +D  +  D V    L+ G+ K G   +A  
Sbjct: 541 EPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFA 600

Query: 189 LYDSMLRNGIMPD 201
           L   M+ +G+  D
Sbjct: 601 LKAKMINSGLQLD 613



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 7/207 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ D G  P+I+TY  ++ G C    +DEA+  F K+  + L+PN   +T L+D
Sbjct: 493 AIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+D A ++  +M++KG   + V  + L+DG+ K  N++ AF +  +M  + +  
Sbjct: 553 GLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  Y+  + G C   +++EA       ++N + PD V Y  LI    K G   EA  L 
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQ 672

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + M       + LL  T AD    S G
Sbjct: 673 NEM-------ESLLSCTNADAASGSDG 692



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 35/252 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD AL L  ++  +G+  +++TY  ++ G C   ++ EA  +F  +    ++ N +
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL 405

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
            +T LI                                      C   ++D+A  + +KM
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E G K N V Y+ ++D  FK++    A  + ++M ++   PNIV+Y  L+DGLCK G +
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSI 525

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA+  F+  +D  L P+V  Y  L+ G CK GR  +A+ L D M+  G+  D ++ ++L
Sbjct: 526 DEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSL 585

Query: 209 ADYNLQSSGSQE 220
            D +L+    Q+
Sbjct: 586 MDGHLKQGNLQD 597



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E   + A +LF QL      P++ T+N +I   C    L EA  L  ++  +   P+
Sbjct: 173 LARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPD 228

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID + K G +++   +  +M   G + +VVTY+ L++ + K   M+ A+  + 
Sbjct: 229 VVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFA 288

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N+V++S  +D  CK G++ EA+  F       + P+ VTY  L+ G CKAG
Sbjct: 289 EMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAG 348

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A+ L + M++ G+  + +  + L D
Sbjct: 349 RLDDALVLTNEMVQQGVPLNVVTYTVLVD 377



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 35/235 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KLF Q+  +G++P+ +TY  ++ G C   RLD+A+ L  ++    +  N +T+T+L+D
Sbjct: 318 AMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVD 377

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEG++ +A  +F  M   G +AN + Y+ LI G+F  +N + A  +  EM +  +  
Sbjct: 378 GLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMEL 437

Query: 131 NIVSYSILIDGLC-----------------------------------KRGLMEEALYAF 155
           ++  Y  LI GLC                                   K     EA+   
Sbjct: 438 DVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALL 497

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +D+   P++VTY  L+ G CKAG   EA+  ++ M+  G+ P+    + L D
Sbjct: 498 QKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 85/150 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F ++ D GLEP++  Y  ++ G C   RLD+AV L +++    +  +
Sbjct: 519 LCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLD 578

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++  T L+D   K+G + DA  + +KM+  G + ++  Y+C + G+     ++ A +V  
Sbjct: 579 NVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLS 638

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM EN I+P+ V Y+ LI+   K G MEEA
Sbjct: 639 EMIENGITPDAVVYNCLINKCQKLGNMEEA 668


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 110/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL+ + ++ + G  P + TY  ++C  C   R  EA+ LF ++     +PN  T+T+
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTV 330

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CKEGRMD+A  M ++M+EKG   +VV ++ LI  Y K   M+ A  V   M    
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +Y+ LI G C+   M+ A+   +  +++ L PDVVTY  LI G C+ G    A 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 188 QLYDSMLRNGIMPD 201
           +L+  M+R+G  PD
Sbjct: 451 RLFRLMIRDGFSPD 464



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 1/211 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LFG++ +RG EP++ TY  +I   C   R+DEA+++  ++    + P+ + F  LI 
Sbjct: 309 ALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIG 368

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           ++CK G M+DA  +   M  K    NV TY+ LI G+ + ++M  A  +  +M E+ +SP
Sbjct: 369 SYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSP 428

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ LI GLC+ G+++ A   F   + +   PD  T+   +   C+ GR  EA Q+ 
Sbjct: 429 DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQIL 488

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +S+    +  +    + L D     +G  EH
Sbjct: 489 ESLKEKHVKANEHAYTALID-GYCKAGKIEH 518



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 100/183 (54%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           + ++Y  +I G C   +L EA++ + ++      P   T+T+L+ A C+ GR  +A  +F
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M E+G + NV TY+ LID   K   M  A  +  EM E  ++P++V ++ LI   CKR
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G+ME+A+          + P+V TY  LI G+C+      AM L + M+ + + PD +  
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433

Query: 206 STL 208
           +TL
Sbjct: 434 NTL 436



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  ++ +  L PD++TYNT+I G C +  +D A +LF  +      P+  TF  
Sbjct: 411 MDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNA 470

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            +   C+ GR+ +A  +   + EK  KAN   Y+ LIDGY K+  ++ A  +++ M    
Sbjct: 471 FMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE 530

Query: 128 ISPNIVSYSILIDGLCKRG--------------------------LMEEALYAFHCALDN 161
             PN ++++++IDGL K G                          L+EE L  +     N
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRAN 590

Query: 162 HLL---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +L         P+VVTY   I+ YC  GR  EA ++   +   G++ D  + + L +
Sbjct: 591 EILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 6/210 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A+ + G +  + + P++ TYN +ICG+C    +D A+ L  K+   +L P+ +
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   C+ G +D A+ +F  M+  G   +  T++  +    +   +  A  + E +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E ++  N  +Y+ LIDG CK G +E A   F   L    LP+ +T+ ++I G  K G+ 
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKV 551

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
            +AM L + M +  + P      TL  YN+
Sbjct: 552 QDAMLLVEDMAKFDVKP------TLHTYNI 575



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+ TY +++ GYC  + ++ A  +F    CV  + N++++T LI   C+ G++ +A   
Sbjct: 222 PDLFTYTSLVLGYCRNDDVERACGVF----CVMPRRNAVSYTNLIHGLCEAGKLHEALEF 277

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           +++M E G    V TY+ L+    +S     A  ++ EM E    PN+ +Y++LID LCK
Sbjct: 278 WARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCK 337

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G M+EAL   +  ++  + P VV +  LI  YCK G   +A+ +   M    + P+
Sbjct: 338 EGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPN 394



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 7/197 (3%)

Query: 8   LDAALKLFGQ-LTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +D  + L+ + LTD G  + P++IT NT++  YC L  +  A   F ++   +  P+  T
Sbjct: 167 VDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFT 226

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T L+  +C+   ++ A  +F  M    P+ N V+Y+ LI G  ++  +  A + +  M 
Sbjct: 227 YTSLVLGYCRNDDVERACGVFCVM----PRRNAVSYTNLIHGLCEAGKLHEALEFWARMR 282

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+   P + +Y++L+  LC+ G   EAL  F    +    P+V TY +LI   CK GR  
Sbjct: 283 EDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMD 342

Query: 185 EAMQLYDSMLRNGIMPD 201
           EA+++ + M+  G+ P 
Sbjct: 343 EALKMLNEMVEKGVAPS 359



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITFTILIDAFCKEGRMDDAT 82
            + +YN ++      + +DE + L++++       + PN IT   +++++CK G M  A 
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           + F ++L   P  ++ TY+ L+ GY ++ +++ A  V+  M   N     VSY+ LI GL
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHGL 265

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C+ G + EAL  +    ++   P V TY +L+   C++GR  EA+ L+  M   G  P+ 
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325

Query: 203 LLLSTLADY 211
              + L DY
Sbjct: 326 YTYTVLIDY 334



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 29/222 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++KE   D A ++  +L   G +P+++TY   I  YCS  RL+EA ++  K+    +  +
Sbjct: 580 VLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLD 639

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL-----IDGYFKSQNMKSA 116
           S  + +LI+A+   G +D A  +  +M   G + + +TYS L     I+ + K  +    
Sbjct: 640 SFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVG 699

Query: 117 FDV------------------------YEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            DV                        +E+M E    PN+ +YS LI+GLCK G +  A 
Sbjct: 700 LDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAF 759

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
             +H   +  + P  + +  L+   CK G   EA+ L DSM+
Sbjct: 760 SLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMM 801



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 111/297 (37%), Gaps = 99/297 (33%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++   L ++ ++ +   Y  +I GYC   +++ A  LF+++   +  PNSITF ++ID
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543

Query: 71  AFCKEGRMDDATMM-----------------------------------FSKMLEKGPKA 95
              KEG++ DA ++                                    ++++  G + 
Sbjct: 544 GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQP 603

Query: 96  NVVTYSCLIDGY-------------FKSQN----------------------MKSAFDVY 120
           NVVTY+  I  Y              K +N                      + SAF V 
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVL 663

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA-------LYAFHCALDNH----------- 162
             M      P+ ++YSIL+  L      +E        +   + ++DN            
Sbjct: 664 RRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGIT 723

Query: 163 -----------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                       +P++ TY+ LI G CK GR   A  LY  M   GI P  ++ ++L
Sbjct: 724 TVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSL 780



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 72/137 (52%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ + G  P++ TY+ +I G C + RL+ A  L+  +    + P+ I    L+ + C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G   +A  +   M+E    A++ +Y  LI G F+  N + A  V+  +     + + V
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845

Query: 134 SYSILIDGLCKRGLMEE 150
           ++ +LIDGL K G +++
Sbjct: 846 AWKVLIDGLAKTGYVDQ 862



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 64/141 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  L+  + + G+ P  I +N+++   C L    EAV L + +       +
Sbjct: 749 LCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAH 808

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ +LI    ++   + A  +F  +L  G   + V +  LIDG  K+  +    ++  
Sbjct: 809 LESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLN 868

Query: 122 EMCENNISPNIVSYSILIDGL 142
            M +N    +  +YS+L+  L
Sbjct: 869 LMEKNGCRLHPETYSMLMQEL 889


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 116/209 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++PD++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G   ++V +S +I+   K   +  A ++++      
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V YS+L+DG C  G ME+AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            L+  ML+ GI P  +L S + D   Q+ 
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAG 631



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 117/199 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I ++I
Sbjct: 563 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 622

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A M F +M E G   ++ TY+ ++ G FK++    A  +++E+   N
Sbjct: 623 IIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 682

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++ + +IDG+ +   +EEA   F     + L+P+VVTY+I+I    K G   EA 
Sbjct: 683 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAE 742

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  P+  LL+
Sbjct: 743 DMFSSMQNAGCEPNSRLLN 761



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  +II  N ++ G+C   R DEA+ +      +L CV   P+  +++
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCV---PDVFSYS 199

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     NVV Y+ +IDG+FK  ++  A D+++EM 
Sbjct: 200 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 259

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++V+Y+ ++  LCK   M++A       ++  +LP+  TY  LI GY   G+  
Sbjct: 260 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 319

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R+ I+PD + LS L
Sbjct: 320 EAVRVFKEMRRHSILPDVVTLSML 343



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 121/207 (58%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ PD  T+N +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 385 KGCLVDMT-DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 443

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I A C+ G+MDDA   F++M+++G   +   Y+CLI G+    ++  A ++  E+
Sbjct: 444 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 503

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +S +I+ LCK G + +A   F   ++  L PD V Y++L+ GYC  G+ 
Sbjct: 504 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM 563

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ ++  TL +
Sbjct: 564 EKALRVFDAMVSAGIEPNVVVYCTLVN 590



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 115/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++ + P+  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T ++L+ + CK G++ +A  +F  M  KG   +V +Y+ +++GY     +    D+++
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P+  ++++LI      G++++A+  F+   D+ + PDVVTY  +I   C+ G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G+ PD
Sbjct: 457 KMDDAMEKFNQMIDQGVAPD 476



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ PD   YN +I G+C+   L +A +L  ++    +  + + F+ 
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G   + V YS L+DGY     M+ A  V++ M    
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+V Y  L++G CK G ++E L  F   L   + P  + Y+I+I G  +AGR   A 
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637

Query: 188 QLYDSMLRNGIMPD 201
             +  M  +GI  D
Sbjct: 638 MKFHEMTESGIAMD 651



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 114/210 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ +++II   C L R+ +A  +F+    V L P+++ +++L+D
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + NVV Y  L++GY K   +     ++ EM +  I P
Sbjct: 556 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 615

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + YSI+IDGL + G    A   FH   ++ +  D+ TY I++RG  K     EA+ L+
Sbjct: 616 STILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 675

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  + + L+T+ D   Q+   +E
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEE 705



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 97/177 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++ YNT+I G+     +++A  LF+++    + P+ +T+  ++ A CK   MD A   
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ K    N  TY+ LI GY  +   K A  V++EM  ++I P++V+ S+L+  LCK
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI PD
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 406



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + N++  + L++G+ +++    A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SYSIL+  LC +G   +A        +   +  P+VV Y  +I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G+ K G   +A  L+  M++ GI PD
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPD 266



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 75/151 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ +IIT NT+I G     R++EA  LF  ++  +L PN
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I    KEG +++A  MFS M   G + N    + ++    K   +  A     
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 781

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           ++ E N S   ++  +L+D    +G   E +
Sbjct: 782 KIDERNFSLEHLTAMLLVDLFSSKGTCREQI 812


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 113/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A +L   + + G EPD  TYN ++ G+    +L+ A   F+++    L PN +++T
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K+G++D A  +  +M E G   NV +Y+ +I+G  K      A  + ++M E 
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++Y+ LIDGLC+ G  + A   FH       LP++ TY+ LI G C+ G+  EA
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M R G+ PD +  ++L D
Sbjct: 638 EILLKEMERKGLAPDEVTFTSLID 661



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 115/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  +F ++   G +P+ +TY+T+I G C+  R+DEA+ + E++    ++P   T+T
Sbjct: 248 NLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYT 307

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + I A C     ++A  + ++M ++G + NV TY+ LI G  +   ++ A  +Y +M + 
Sbjct: 308 LPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE 367

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN V+Y+ LI+ LC  G    AL  FH    +  L +  TY  +I+G C  G   +A
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M L++ ML+ G +P  +  +TL +
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLIN 451



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
               ALK+F  +   G   +  TYN II G C    +++A+ LFEK+  +   P  +T+ 
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+ +  +G +++A  +   M E G + +  TY+ L+ G+ K   ++SA   ++EM E 
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++PN VSY+ LIDG  K G ++ AL       +    P+V +Y  +I G  K  R +EA
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            ++ D M+  G++P+ +  +TL D
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLID 591



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 6/220 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L++A   F ++ + GL P+ ++Y  +I G+    ++D A+ L +++  +   PN  
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  +I+   KE R  +A  +  KM+E+G   NV+TY+ LIDG  ++   + AF ++ +M
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PN+ +YS LI GLC+ G  +EA           L PD VT+  LI G+   GR 
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRI 669

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A  L   M+  G  P+         Y++   G Q+ C+
Sbjct: 670 DHAFLLLRRMVDMGCKPN------YRTYSVLLKGLQKECL 703



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 35/223 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++  RG  P++ TY  +I G   L +L+ A+ L+ K+    L PN++T+  LI+  C
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 74  KEGR-----------------------------------MDDATMMFSKMLEKGPKANVV 98
             GR                                   ++ A ++F KML+ GP   VV
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ LI+GY    N+ +A  + + M EN   P+  +Y+ L+ G  K G +E A + F   
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++  L P+ V+Y  LI G+ K G+   A+ L   M   G  P+
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 108/205 (52%), Gaps = 4/205 (1%)

Query: 1   MLIKECHLDAALK----LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C  +  ++       +++  G    + + NT++        ++ A  L++++   
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            ++P+ +TF  LI+   K+G++ +A ++ S++ +     +V TY+ LI G+ +++N+  A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F V++ M +    PN V+YS LI+GLC  G ++EAL      ++  + P V TY + I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
            C      EA++L   M + G  P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPN 337



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 4/164 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A K+  ++ ++GL P++ITY T+I G C   R   A ++F  +   +  PN
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPN 617

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LI   C+EG+ D+A ++  +M  KG   + VT++ LIDG+     +  AF +  
Sbjct: 618 LYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLR 677

Query: 122 EMCENNISPNIVSYSILIDGLCKRG-LMEEALYAFHCALDNHLL 164
            M +    PN  +YS+L+ GL K   L+EE ++     +DN+ L
Sbjct: 678 RMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPL---VDNYFL 718



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 100 YSC--LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           YSC  L+    K + ++ A ++Y++M  + I P++++++ LI+ L K+G + EA      
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                L PDV TY  LI G+C+      A  ++D M++ G  P+ +  STL +
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLIN 276


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 116/209 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++PD++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G   ++V +S +I+   K   +  A ++++      
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V YS+L+DG C  G ME+AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            L+  ML+ GI P  +L S + D   Q+ 
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAG 618



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 116/199 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I ++I
Sbjct: 550 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 609

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A + F +M E G   ++ TY+ ++ G FK++    A  +++E+   N
Sbjct: 610 IIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++ + +IDG+ +   +EEA   F     + L+P VVTY+I+I    K G   EA 
Sbjct: 670 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 729

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  P+  LL+
Sbjct: 730 DMFSSMQNAGCEPNSRLLN 748



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  +II  N ++ G+C   R DEA+ +      +L CV   P+  +++
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCV---PDVFSYS 186

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     NVV Y+ +IDG+FK  ++  A D+++EM 
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 246

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++V+Y+ ++  LCK   M++A       ++  +LP+  TY  LI GY   G+  
Sbjct: 247 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 306

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R+ I+PD + LS L
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSML 330



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 121/207 (58%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ PD  T+N +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 372 KGCLVDMT-DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I A C+ G+MDDA   F++M+++G   +   Y+CLI G+    ++  A ++  E+
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 490

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +S +I+ LCK G + +A   F   ++  L PD V Y++L+ GYC  G+ 
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM 550

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ ++  TL +
Sbjct: 551 EKALRVFDAMVSAGIEPNVVVYCTLVN 577



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 115/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++ + P+  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T ++L+ + CK G++ +A  +F  M  KG   +V +Y+ +++GY     +    D+++
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P+  ++++LI      G++++A+  F+   D+ + PDVVTY  +I   C+ G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G+ PD
Sbjct: 444 KMDDAMEKFNQMIDQGVAPD 463



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ PD   YN +I G+C+   L +A +L  ++    +  + + F+ 
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G   + V YS L+DGY     M+ A  V++ M    
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+V Y  L++G CK G ++E L  F   L   + P  + Y+I+I G  +AGR   A 
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624

Query: 188 QLYDSMLRNGIMPD 201
             +  M  +GI  D
Sbjct: 625 VKFHEMTESGIAMD 638



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 114/210 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ +++II   C L R+ +A  +F+    V L P+++ +++L+D
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + NVV Y  L++GY K   +     ++ EM +  I P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + YSI+IDGL + G    A   FH   ++ +  D+ TY I++RG  K     EA+ L+
Sbjct: 603 STILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 662

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  + + L+T+ D   Q+   +E
Sbjct: 663 KELRAMNVKINIITLNTMIDGMFQTRRVEE 692



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 97/177 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++ YNT+I G+     +++A  LF+++    + P+ +T+  ++ A CK   MD A   
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ K    N  TY+ LI GY  +   K A  V++EM  ++I P++V+ S+L+  LCK
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI PD
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + N++  + L++G+ +++    A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SYSIL+  LC +G   +A        +   +  P+VV Y  +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G+ K G   +A  L+  M++ GI PD
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPD 253



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ +IIT NT+I G     R++EA  LF  ++  +L P+
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 708

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I    KEG +++A  MFS M   G + N    + ++    K   +  A     
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 768

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE 150
           ++ E N S   ++  +L+D    +G   E
Sbjct: 769 KIDERNFSLEHLTTMLLVDLFSSKGTCRE 797


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +M++ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 96/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D M+ NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+ L  ++ +R L P +ITYN++I G C +N L+ A +L   +    L P+
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++ ID  CKEGR+++A  +F  +  KG KAN V Y+ LIDGY K   +  A+ + E
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +   PN  +Y++LI+GLCK   M+EA       L   + P VVTY ILI    K G
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A+++++ M+  G  PD
Sbjct: 594 AFDHALKVFNHMVSLGYQPD 613



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 112/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ ALKLF  +T+    P + TY  +I       R  EA+ LF ++     +PN  T+T
Sbjct: 279 RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYT 338

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID  CKE +MD+A  M S+M EKG   +VVTY+ LIDGY K   +  AF++ + M  N
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN  +Y+ LI GLCK+  + +A+   +  L+  L P ++TY  LI G CK      A
Sbjct: 399 SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA 458

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   M  NG++PD    S   D
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFID 482



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 112/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++ ++G EP++ TY  +I G C  N++DEA ++  +++   L P+ +T+  LID
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CKEG +DDA  +   M       N  TY+ LI G  K + +  A  +  +M E  +SP
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y+ LI G CK   +E A        +N L+PD  TY++ I   CK GR  EA  L+
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           DS+   G+  + ++ + L D
Sbjct: 498 DSVKAKGVKANEVIYTALID 517



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A K+  +++++GL P ++TYN +I GYC    +D+A ++ + +      PN
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  LI   CK+ ++  A  + +KMLE+    +++TY+ LI G  K  +++SA+ +  
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M EN + P+  +YS+ ID LCK G +EEA   F       +  + V Y  LI GYCK G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A  L + ML +  +P+    + L +
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIE 552



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 110/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++F  +  +G + + ++Y  +I G C   R++EA++LF  +T     P   T+T+
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A    GR  +A  +F++M EKG + NV TY+ LIDG  K   M  A  +  EM E  
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y+ LIDG CK G++++A         N   P+  TY  LI G CK  +  +AM
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L + ML   + P  +  ++L
Sbjct: 425 ALLNKMLERKLSPSLITYNSL 445



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 98/185 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++   GL PD  TY ++I G+C    +D A ++F  +     + N +++T LI   C+ G
Sbjct: 219 KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAG 278

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R+++A  +F+ M E      V TY+ LI     S     A +++ EM E    PN+ +Y+
Sbjct: 279 RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYT 338

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           +LIDGLCK   M+EA        +  L+P VVTY  LI GYCK G   +A ++ D M  N
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398

Query: 197 GIMPD 201
              P+
Sbjct: 399 SCGPN 403



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 102/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +L   + + GL PD  TY+  I   C   R++EA  LF+ +    +K N + +T 
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CK G++D A  +  +ML      N  TY+ LI+G  K + MK A  +  +M    
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P +V+Y+ILI  + K G  + AL  F+  +     PDV TY   +  Y   G   E  
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            +   M   GI+PD +  + L D
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLID 657



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 104/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  LF  +  +G++ + + Y  +I GYC + ++D A  L E++      PN
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T+ +LI+  CKE +M +A+ + +KML  G K  VVTY+ LI    K      A  V+ 
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ +Y+  +     +G++EE         +  +LPD+VTY +LI GY + G
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A      M+  G  P   ++S L
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSLYIVSIL 690



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D    ++ +L +  + P+I T+N ++ GYC +  + EA     K+    L P++ T+T 
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTS 234

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+   +D+A  +F  M +KG + N V+Y+ LI G  ++  +  A  ++ +M E+N
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P + +Y++LI  L   G   EAL  F+   +    P+V TY +LI G CK  +  EA 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++   M   G++P  +  + L D
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALID 377



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 90/178 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  L  ++ +    P+  TYN +I G C   ++ EA  L  K+  + +KP  +T+TI
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K+G  D A  +F+ M+  G + +V TY+  +  YF    ++   DV  +M E  
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           I P++V+Y++LIDG  + GL   A     C +D    P +   +ILI+      R  E
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 3/202 (1%)

Query: 12  LKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           L++F ++   G    +P +  YNTI+        +DE   ++ +L   Q+ PN  TF  +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++ +CK G + +A +  SK+++ G   +  TY+ LI G+ +++ + +A++V+  M +   
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             N VSY+ LI GLC+ G + EAL  F    +++  P V TY +LI     +GR  EA+ 
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           L++ M   G  P+    + L D
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLID 342



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 29/238 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  L  ++   G++P ++TY  +I         D A+++F  +  +  +P+
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T  + A+  +G +++   + +KM E+G   ++VTY+ LIDGY +      AFD  +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE-----------------------------AL 152
            M +    P++   SILI  L     M+E                             AL
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIAL 733

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             F   +++    DV  Y  LI G+C+  R  EA  L   M   G+ P   + ++L D
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 38/235 (16%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +  ++ + G+ PD++TY  +I GY  L     A    + +     KP+    +ILI    
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLS 695

Query: 74  KEGRMDD-----------------------------ATMMFSKMLEKGPKANVVTYSCLI 104
            E RM +                             A  +F KM+E G   +V  Y  LI
Sbjct: 696 HENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALI 755

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G+ + + ++ A  +   M E  +SP+   Y+ L+D  CK G+  EA+      ++N LL
Sbjct: 756 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL 815

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG---------IMPDGLLLSTLAD 210
           P + +Y +L+ G    G   +A  ++  +L  G         ++ DGLL   L D
Sbjct: 816 PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 870



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 73/147 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    + ALKLF ++ + G   D+  Y  +I G+C   RL+EA  L   +    + P+  
Sbjct: 725 KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 784

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  L+D  CK G   +A  +   M+E G    + +Y  L+ G +   + + A  V+  +
Sbjct: 785 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 844

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEE 150
                + + V++ +LIDGL KR L++E
Sbjct: 845 LSCGYNYDEVAWKVLIDGLLKRDLVDE 871



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           A++LFEK+       +   +  LI  FC++ R+++A  +   M E+G   +   Y+ L+D
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
              K      A  + + M EN + P + SY +L+ GL   G  E+A   FH  L      
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 851

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           D V + +LI G  K     E  +L D M
Sbjct: 852 DEVAWKVLIDGLLKRDLVDECSELIDIM 879


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L  ++  + + PDI TY+T+I   C L++ +    LF ++  + + PN  
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC 284

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  +ID  CKEG+++DA  +   M+EKG   +V+TY+ +IDGY     +  A ++++ M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              +I PNI+SY+ILI+G  ++  ++EA+          L P +VT  +L+ G  + GR 
Sbjct: 345 INKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A   +D ML  G +PD
Sbjct: 405 KSAQNFFDEMLSAGHIPD 422



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L  E  +  A+ LF +L    + EP+ + Y T++ G C      +A  L   +     KP
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+  ++I+IDAFCK+G +D AT + ++M +K    ++ TYS LID   K    ++   ++
Sbjct: 212 NTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLF 271

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   NI PN+ +++ +IDGLCK G +E+A       ++  + PDV+TY ++I GY   
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+   A +++DSM+   I P+
Sbjct: 332 GQVDRAREIFDSMINKSIEPN 352



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 114/214 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  + ++ +EP+II+YN +I GY    ++DEA+Q+  +++   LKP+ +T  
Sbjct: 333 QVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+    + GR   A   F +ML  G   ++ T+  L+ GYFK+  ++ A   + ++   
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               NI  Y+ +IDGLCK G +++A   F       L PDV+TY  +I GYC+ G   EA
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +   M  NG + D    + +    L+S+   E
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 104/199 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  L   +     +P+   Y+ +I  +C    LD A  L  ++    + P+
Sbjct: 188 LCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPD 247

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LIDA CK  + ++   +F +M+      NV T++ +IDG  K   ++ A ++  
Sbjct: 248 IFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMR 307

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P++++Y+++IDG   RG ++ A   F   ++  + P++++Y ILI GY +  
Sbjct: 308 YMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQK 367

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  EAMQ+   + + G+ P
Sbjct: 368 KIDEAMQVCREISQKGLKP 386



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  LF Q+      P +++++ ++     +      V LF ++  +++  +    +I
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++++ C   R D    + +   +KG   N V ++ L+ G F    +K A  +++++   N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 128 I-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           I  PN V Y  +++GLCK+G  ++A             P+   Y+I+I  +CK G    A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M +  I PD    STL D
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLID 256



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 77/149 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+  F +L  R  + +I  Y  +I G C   +LD+A   FEKL  + L P+ IT+T 
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C+EG +D+A  M  KM + G  A+  TY+ ++ G+ +S  +       EE+   +
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKS 558

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            S    +  +L+D + +   +   +  FH
Sbjct: 559 FSFEAATVELLMDIIAEDPSLLNMIPEFH 587



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+   H  + + LF ++    +       + ++   C ++R D    +        +  N
Sbjct: 82  LVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFN 141

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + F  L+     E ++ DA  +F K++ +   + N V Y  +++G  K  + + AFD+ 
Sbjct: 142 QVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLL 201

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M + +  PN   YSI+ID  CK G+++ A    +      + PD+ TY+ LI   CK 
Sbjct: 202 RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKL 261

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +      L+  M+   I P+    +++ D
Sbjct: 262 SQWENVRTLFLEMIHLNIYPNVCTFNSVID 291



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 47/104 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A   F +L   GL PD+ITY  +I GYC    LDEA  +  K+       +
Sbjct: 468 LCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLAD 527

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           + T+ +++  F +  ++ +      ++  K       T   L+D
Sbjct: 528 NRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571


>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           lycioides]
          Length = 397

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 121/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  +DE  +L   +    ++P+  
Sbjct: 137 KEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVY 196

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  MF +ML+KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 197 TYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 256

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 257 LSQSLXPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKITYTTLIDGCCK 312

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 313 EGDLETAFEHRKRMIQEXIRLDDVAYTAL 341



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 110/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D   +L   +   G++PD+ TY+ +I G C  +++D+A ++F+++    L PN +TFT 
Sbjct: 176 MDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTT 235

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +EM    
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 295

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E A       +   +  D V Y  LI G C+  R  +A 
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAE 355

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 356 KVLREMLSVGLKPD 369



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 107/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A ++F ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 205 LCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPD 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 265 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRK 324

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I  + V+Y+ LI GLC+     +A       L   L PD  TY ++I  +CK G
Sbjct: 325 RMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKG 384

Query: 182 RPTEAMQLYDSM 193
                 +L   M
Sbjct: 385 DVWTGSKLLKEM 396



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F  +T   L+P+
Sbjct: 100 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPS 159

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G MD+   + + M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 160 VVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFD 219

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 220 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKG 279

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 280 DLKQAHDLIDEMSMKGLKPDKITYTTLID 308



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 58  FSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117

Query: 125 ENNISPNIVSYSILIDGLCKRG---------------LMEEALYAFHCALDNHLL----- 164
           E     ++  ++IL+   CK G                +  ++ +F+  ++ ++      
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMD 177

Query: 165 ---------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  +A +++D ML  G++P+G+  +TL 
Sbjct: 178 EGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLI 237

Query: 210 D 210
           D
Sbjct: 238 D 238


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 110/198 (55%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++    L+ ++  RG +P+ ITYN +I      NRLD+A+ L+  L      P   
Sbjct: 837  KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            TF  LID   K GR+DDA  MF  M+  G + N   Y+ L++GY K  ++ +A + ++ M
Sbjct: 897  TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  I P++ SY+IL+D LC  G +++AL+ F       L PD+V Y ++I G  ++ R 
Sbjct: 957  VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ L+  M   GI+PD
Sbjct: 1017 EEALSLFHEMQNRGIVPD 1034



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A  +F +L   GL PD +TYN ++  Y  + ++DEA++L  +++ VQ +P+ I   
Sbjct: 489 RLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVIN 548

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K GR+++A  MF +M E      VVTY+ L+ G  K   ++ A  ++E M  +
Sbjct: 549 SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGH 608

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN ++++ L+D LCK   ++ AL  F+     +  PDV+T+  +I G+ K  +   A
Sbjct: 609 GCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNA 668

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L+  M +  + PD + L TL
Sbjct: 669 IWLFHQM-KKLLRPDHVTLCTL 689



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   LD A ++F  +   G  P+   YN ++ GY  L  +D A + F+++    ++P+
Sbjct: 905  LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TIL+D  C  GR+DDA   F K+ + G   ++V Y+ +I+G  +SQ  + A  ++ 
Sbjct: 965  LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM    I P++ +Y+ LI  L   G++EEA   +       L P+V TY  LIRGY  +G
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
                A  +Y  M+  G  P+
Sbjct: 1085 NSELAYGIYKKMMVGGCDPN 1104



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 112/201 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L ++  +D A ++  ++ D G  PD++TY  +I   C+  +LD+A+ LF K+     KP
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+D F   G +D    ++++M   G   +VVT++ L++   K+  +  AFD+ 
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +  + PN+ +Y+ LI GL +   +++AL  F       + P   TY +LI  + K+
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G P +A++ ++ M   GI P+
Sbjct: 453 GHPGKALETFEKMKARGIAPN 473



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 111/213 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++   + L  ++   GL P+I TY   I       ++DEA ++ +++      P+ +
Sbjct: 241 KRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVV 300

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+LIDA C   ++DDA  +F+KM     K + VTY  L+D +    ++     ++ EM
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  +P++V+++IL++ LCK G + EA           +LP++ TY  LI G  +A R 
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRL 420

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            +A+ L+ +M   G+ P       L DY+ +S 
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSG 453



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 1/202 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           +L K      A  +F + T   G++P +  YN +I G+  ++ ++ A  LFE++      
Sbjct: 763 VLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCA 822

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P++ T+  LIDA  K G++++   ++ +ML +G K N +TY+ +I    KS  +  A D+
Sbjct: 823 PDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDL 882

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y  +   + SP   ++  LIDGL K G +++A   F   +     P+   Y IL+ GY K
Sbjct: 883 YYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGK 942

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G    A + +  M++ GI PD
Sbjct: 943 LGHVDTACEFFKRMVKEGIRPD 964



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 1/216 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HLD   K++ ++   G  PD++T+  ++   C   R++EA  L + +    + PN  T+ 
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    +  R+DDA  +FS M   G +    TY  LID + KS +   A + +E+M   
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PNIV+ +  +  L + G + EA   F+    + L PD VTY ++++ Y K G+  EA
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           ++L   M +    PD +++++L D  L  +G  E  
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLID-TLYKAGRVEEA 563



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  L   +  +G+ P++ TYNT+I G    NRLD+A+ LF  +  + ++P 
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPT 438

Query: 62  SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
           + T+ +LID   K G                                   R+ +A  MF+
Sbjct: 439 AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFN 498

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           ++   G   + VTY+ ++  Y K   +  A  +  EM +    P+++  + LID L K G
Sbjct: 499 ELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAG 558

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +EEA   F    + +L P VVTY IL+ G  K G+  +A+QL++SM  +G  P+ +  +
Sbjct: 559 RVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618

Query: 207 TLAD 210
           TL D
Sbjct: 619 TLLD 622



 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+++ ++   GL+P + T++ ++        +   + L E++  + L+PN  T+TI I 
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              ++G++D+A  +  +M + G   +VVTY+ LID    ++ +  A  ++ +M  ++  P
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y  L+D     G +++    +     +   PDVVT+ IL+   CKAGR  EA  L 
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           D+M + G++P+      L  YN   SG
Sbjct: 393 DTMRKQGVLPN------LHTYNTLISG 413



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  H   AL+ F ++  RG+ P+I+  N  +     + RL EA  +F +L    L P+S+
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +++  + K G++D+A  + S+M +   + +V+  + LID  +K+  ++ A+ ++  M
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E N++P +V+Y+IL+ GL K G +++A+  F     +   P+ +T+  L+   CK    
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A++++  M      PD L  +T+
Sbjct: 631 DLALKMFYKMTTMNCRPDVLTFNTI 655



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A ++F ++ +  L P ++TYN ++ G     ++ +AVQLFE +      PN
Sbjct: 554 LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITF  L+D  CK   +D A  MF KM     + +V+T++ +I G+ K   +K+A  ++ 
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH 673

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA-------LYAFHCALDNHLLPDVVTYAILI 174
           +M +  + P+ V+   L+ G+ K G +E+A        Y     +D     DV+   +  
Sbjct: 674 QM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTE 732

Query: 175 RGYCKA 180
            G  KA
Sbjct: 733 AGTEKA 738



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           L +A    EK+       N+ ++  LI    + G   +A  ++ +M+ +G K ++ T+S 
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           L+    K +N+K+   + EEM    + PNI +Y+I I  L + G ++EA        D+ 
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             PDVVTY +LI   C A +  +AM L+  M  +   PD +   TL D
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLD 342



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 71/132 (53%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             +D AL  F +L   GL+PD++ YN +I G     R +EA+ LF ++    + P+  T+ 
Sbjct: 980  RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             LI      G +++A  ++ ++   G K NV TY+ LI GY  S N + A+ +Y++M   
Sbjct: 1040 SLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVG 1099

Query: 127  NISPNIVSYSIL 138
               PN  +++ L
Sbjct: 1100 GCDPNTGTFAQL 1111



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +  ++ G  +    ++A+   E+L C  +  +      +I   CK  +   A  +F K  
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781

Query: 90  -EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E G K  +  Y+ LIDG+ +  N++ A++++EEM     +P+  +Y+ LID   K G +
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            E    +   L     P+ +TY ++I    K+ R  +AM LY +++     P       L
Sbjct: 842 NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 209 ADYNLQSS 216
            D  L+S 
Sbjct: 902 IDGLLKSG 909



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%)

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R++D   +F  M  +  + NV TY  +    F    ++ A    E+M E     N  SY+
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI  L + G  +EAL  +   +   L P + T++ L+    K       M L + M   
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258

Query: 197 GIMPD 201
           G+ P+
Sbjct: 259 GLRPN 263


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 114/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +  AA+++F ++  +G+   ++TYN++I G CS  +++E V+L E++  + L PN I
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  ++  FCK+G M DA      M E+  + +VV Y+ LIDGY +   M+ A  V E M
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAM 395

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISPN+ +Y+ LI G  + G    A        +  +  DVVTY +LI   C  G  
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L D M   G+ P+ L  +T+
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTI 480



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D A K F     R + PDI T+NT+I G C + +L +A  + + +    L P+
Sbjct: 166 LVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS 225

Query: 62  SITFTILIDAFCKEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             T+  LID +CK+G    M    M+  +M+E G     VT+  LI+GY K+ N  +A  
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+EEM +  I+ ++V+Y+ LI GLC  G +EE +       D  L P+ +T+  +++G+C
Sbjct: 286 VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFC 345

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K G   +A    D M    + PD ++ + L D
Sbjct: 346 KKGMMADANDWIDGMTERNVEPDVVIYTILID 377



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 3/195 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D  LK   ++ + G+ P  +T+  +I GYC  +    AV++FE++    +  + +T+ 
Sbjct: 247 HVDMLLK---EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++++   +  +M + G   N +T+ C++ G+ K   M  A D  + M E 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P++V Y+ILIDG  + G ME+A+          + P+V TY  LI G+ ++G    A
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 187 MQLYDSMLRNGIMPD 201
             L D M   GI  D
Sbjct: 424 SGLLDEMKEKGIEAD 438



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P   + N ++ G     R+D A + F      ++ P+  TF  +I   C+ G++  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV---YEEMCENNISPNIVSYSILID 140
           +   +   G   +V TY+ LIDGY K     + + V    +EM E  ISP  V++ +LI+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK      A+  F       +   VVTY  LI G C  G+  E ++L + M   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 201 D 201
           +
Sbjct: 333 N 333



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 93/174 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +   +  +G+ P++ TYN +I G+        A  L +++    ++ + +T+ +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C +G +  A  +  +M E G + N +TY+ +I G+    N+KSA+++   M +  
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              N+V+Y++ I   C+ G M+EA    +  LD  L+P+ +TY  +  G  + G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  S + L+ GL     ++ A  AF  AL   + PD+ T+  +I G C+ G+  +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
              +   G+ P     ++L D   +  G+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGA 242



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +++TYN  I  +C + ++DEA  L  ++    L PN IT+  + +   ++G   D
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 109/200 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  L  A +  G +   G++P+++TYNTII G+C   +   A  +F+ +    L+P
Sbjct: 225 VLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEP 284

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+   I   CKEGR+++A+ +  KMLE G   N VTY+ LIDGY    ++  A+   
Sbjct: 285 DCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYR 344

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    I  ++V+Y++ I  L   G M +A        +  ++PD VT+ ILI GYC+ 
Sbjct: 345 DEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRC 404

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           G    A  L D M+  GI P
Sbjct: 405 GDAKRAFGLLDEMVGKGIQP 424



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 123/268 (45%), Gaps = 70/268 (26%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  + D+GLEPD  TYN+ I G C   RL+EA  L  K+    L PN++T+  LID
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329

Query: 71  AFCK-----------------------------------EGRMDDATMMFSKMLEKGPKA 95
            +C                                    EGRM DA  M  +M EKG   
Sbjct: 330 GYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP 389

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           + VT++ LI+GY +  + K AF + +EM    I P +V+Y+ LI  L KR  M+EA   F
Sbjct: 390 DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALF 449

Query: 156 ---------------------HCA-------------LDN-HLLPDVVTYAILIRGYCKA 180
                                HCA             +DN  +LPD +TY  L++GYC+ 
Sbjct: 450 SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCRE 509

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G+  EA QL D M R GI PD +  +TL
Sbjct: 510 GKVEEARQLLDEMKRRGIKPDHISYNTL 537



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 10/196 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +  A  LF ++   GL PDII +N +I G+C+   +D A QL +++  +++ P
Sbjct: 435 VLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+  L+  +C+EG++++A  +  +M  +G K + ++Y+ LI GY K  +MK AF V 
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM      P I++Y+ LI GLCK    E A       +   + PD  TY  +I      
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII------ 608

Query: 181 GRPTEAMQLYDSMLRN 196
               EAM+  D +  N
Sbjct: 609 ----EAMETVDDLEGN 620



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +  ++ ++G+ PD +T+N +I GYC       A  L +++    ++P 
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI    K  RM +A  +FSK+ ++G   +++ ++ LIDG+  + N+  AF + +
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+ ++Y+ L+ G C+ G +EEA           + PD ++Y  LI GY K G
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A ++ D M+  G  P  L  + L
Sbjct: 546 DMKDAFRVRDEMMTTGFDPTILTYNAL 572



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 6/205 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL+ F  + ++G  P+I T N ++  +  LNR   A  L+ ++  + ++ +  TF I+
Sbjct: 163 NEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIM 222

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  CKEG++  A      M   G K NVVTY+ +I G+      + A  +++ M +  +
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGL 282

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+  +Y+  I GLCK G +EEA       L+  L+P+ VTY  LI GYC  G   +A  
Sbjct: 283 EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA 342

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNL 213
             D M+  GIM      ++L  YNL
Sbjct: 343 YRDEMISKGIM------ASLVTYNL 361



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 96/191 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +G++P ++TY ++I      NR+ EA  LF K+    L P+ I F  LID
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G +D A  +  +M       + +TY+ L+ GY +   ++ A  + +EM    I P
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + +SY+ LI G  KRG M++A       +     P ++TY  LI+G CK      A +L 
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589

Query: 191 DSMLRNGIMPD 201
             M+  GI PD
Sbjct: 590 KEMVSKGITPD 600



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           DR      + ++ ++  YC L + +EA++ F  +      PN  T   ++  F K  R  
Sbjct: 139 DRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQ 198

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A +++++M     ++++ T++ +I+   K   +K A +    M    + PN+V+Y+ +I
Sbjct: 199 MAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTII 258

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            G C RG  + A   F    D  L PD  TY   I G CK GR  EA  L   ML  G++
Sbjct: 259 HGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV 318

Query: 200 PDGLLLSTLAD 210
           P+ +  + L D
Sbjct: 319 PNAVTYNALID 329


>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Brachypodium distachyon]
          Length = 746

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 119/210 (56%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+ A K+  ++  +GL P+   ++ +I G+C L  +D A ++++ +    +KPN
Sbjct: 428 LVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPN 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ +ID   + G+M +A ++F +M+E     N++TYS ++ GYF+  +   A   +E
Sbjct: 488 VVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWE 547

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M     +PN V+YS+LI+GLC  G  ++A+  +   L    +PD + Y  +I+G+C +G
Sbjct: 548 DMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSG 607

Query: 182 RPTEAMQL-YDSMLRNGIMPDGLLLSTLAD 210
                ++L YD + R    PD +  + L D
Sbjct: 608 MVDAGLRLFYDMLARGDTHPDVICYNVLLD 637



 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 108/199 (54%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA+ +  ++    + P ++TY  ++ G     RL++A ++ E++    L PN   F+ +I
Sbjct: 401 AAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVI 460

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FCK G +D A+ ++  M+  G K NVV YS +IDG  +   M  A  ++ EM E    
Sbjct: 461 TGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV 520

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PNI++YS ++ G  + G   +AL  +   L     P+ VTY++LI G C  GR  +AM +
Sbjct: 521 PNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMV 580

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           +  ML  G +PD +  +++
Sbjct: 581 WKHMLGRGCVPDTIAYTSM 599



 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++   +  A KLF  +  +G  P   TYN ++ G     R   A+ +  ++   ++ P 
Sbjct: 358 MLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPG 417

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D   + GR++DA  +  +M  KG   N   +S +I G+ K   +  A  V++
Sbjct: 418 VMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWD 477

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I PN+V YS +IDGL + G M EA   F   ++   +P+++TY+ ++RGY + G
Sbjct: 478 TMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIG 537

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A+  ++ MLR G  P+ +  S L
Sbjct: 538 DSSQALSFWEDMLRIGCTPNAVTYSVL 564



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 1/188 (0%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L PD  TY+T++       R+D+AV L  ++  V     +  F  ++ A  + G +  A 
Sbjct: 310 LVPDKFTYSTVVSALADAGRVDDAVALVHEMV-VDGVVAAEAFNPVLGAMLRTGDVTGAA 368

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +FS M  KG   +  TY+ L+ G       K+A  V   M    + P +++Y  ++DGL
Sbjct: 369 KLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGL 428

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            + G +E+A           L+P+   ++ +I G+CK G    A +++D+M+  GI P+ 
Sbjct: 429 VRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNV 488

Query: 203 LLLSTLAD 210
           +L S + D
Sbjct: 489 VLYSAMID 496



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 89/163 (54%), Gaps = 1/163 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ +    P+I+TY++++ GY  +    +A+  +E +  +   PN++T+++LI+  C
Sbjct: 510 LFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLC 569

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-YEEMCENNISPNI 132
             GR  DA M++  ML +G   + + Y+ +I G+  S  + +   + Y+ +   +  P++
Sbjct: 570 NVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDV 629

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           + Y++L+DGL +   +  A+   +  LD    PD VT    +R
Sbjct: 630 ICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLR 672



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 18/190 (9%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  +  +   G  P+ +TY+ +I G C++ R  +A+ +++ +      P++I +T +I 
Sbjct: 542 ALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIK 601

Query: 71  AFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            FC  G +D    +F  ML +G    +V+ Y+ L+DG  +++++  A D+  +M +    
Sbjct: 602 GFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACD 661

Query: 130 PNIVSYSI-----------------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
           P+ V+ +                  L+  LC R   + A       L  +++P+     +
Sbjct: 662 PDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAAVLEM 721

Query: 173 LIRGYCKAGR 182
           ++RG C+  R
Sbjct: 722 VVRGVCRRKR 731


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 120/210 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +  A ++  ++   G+ PD + Y T+I G+C L  +  A +LF+++   ++ P
Sbjct: 232 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 291

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+T +I   C+ GR+ +A  +F +M+ K  + + VTY+ LIDGY K   MK AF ++
Sbjct: 292 DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLH 351

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +  ++PNIV+Y+ L DGLCK G ++ A    H      L  ++ TY  L+ G CKA
Sbjct: 352 NQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKA 411

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A++L   M   G  PD +  +TL D
Sbjct: 412 GNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 441



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 111/211 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++D A+KL   +   G  PD +TY T++  YC    +  A +L  ++   +L+P 
Sbjct: 408 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 467

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L++ FC  G ++D   +   MLEKG   N  TY+ LI  Y    NM++  ++Y 
Sbjct: 468 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 527

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            MC   + P+  +Y+ILI G CK   M+EA +     +       V +Y  LI+G+ K  
Sbjct: 528 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 587

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           +  EA +L++ M R G++ D  + +  AD N
Sbjct: 588 KFLEARELFEQMRREGLVADREIYNIFADIN 618



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF ++  + LEPD +TY  +I GYC   ++ EA  L  ++  + L PN +T+T L D
Sbjct: 312 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 371

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G +D A  +  +M  KG + N+ TY+ L++G  K+ N+  A  + ++M      P
Sbjct: 372 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 431

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+D  CK   M  A       LD  L P VVT+ +L+ G+C +G   +  +L 
Sbjct: 432 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 491

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  GIMP+    ++L
Sbjct: 492 KWMLEKGIMPNATTYNSL 509



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  L  Q+   GL P+I+TY  +  G C    +D A +L  ++    L+ N  
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++  CK G +D A  +   M   G   + VTY+ L+D Y KS+ M  A ++  +M
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P +V++++L++G C  G++E+        L+  ++P+  TY  LI+ YC     
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 184 TEAMQLYDSMLRNGIMPDG 202
               ++Y  M   G++PDG
Sbjct: 520 RATTEIYRGMCAKGVVPDG 538



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIIC-------GYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           A KLF ++ + GL   + + N  I        G     + +  ++L E++    LKPN  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I   CK G++ +A  +  +M+ +G   + V Y+ LIDG+ K  N+ SA+ +++EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISP+ ++Y+ +I GLC+ G + EA   FH  +   L PD VTY  LI GYCK G+ 
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L++ ML+ G+ P+ +  + LAD
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALAD 371



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 102/190 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +  LKL  ++  +GL+P+  TYN +I   C   ++ EA ++  ++    + P+ + +T L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID FCK G +  A  +F +M ++    + +TY+ +I G  ++  +  A  ++ EM    +
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ V+Y+ LIDG CK G M+EA    +  L   L P++VTY  L  G CK G    A +
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384

Query: 189 LYDSMLRNGI 198
           L   M R G+
Sbjct: 385 LLHEMCRKGL 394



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 104/191 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++  +GLE +I TYN+++ G C    +D+AV+L + +      P+++T+T 
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA+CK   M  A  +  +ML++  +  VVT++ L++G+  S  ++    + + M E  
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN  +Y+ LI   C R  M      +       ++PD  TY ILI+G+CKA    EA 
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558

Query: 188 QLYDSMLRNGI 198
            L+  M+  G 
Sbjct: 559 FLHRDMVGKGF 569



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 92/191 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  Q+ DR L+P ++T+N ++ G+C    L++  +L + +    + PN+ T+  LI 
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C    M   T ++  M  KG   +  TY+ LI G+ K++NMK A+ ++ +M     + 
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 571

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + SY+ LI G  KR    EA   F       L+ D   Y I        G+    ++L 
Sbjct: 572 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 631

Query: 191 DSMLRNGIMPD 201
           D  +   ++ D
Sbjct: 632 DEAIEKCLVGD 642



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 79/162 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   KL   + ++G+ P+  TYN++I  YC  N +    +++  +    + P+  T+ I
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK   M +A  +   M+ KG    V +Y+ LI G++K +    A +++E+M    
Sbjct: 544 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           +  +   Y+I  D     G ME  L     A++  L+ D+ T
Sbjct: 604 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ +F ++  +G+ PD++TY+T+I  +C + RL +A++ F ++  + L+PN++
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +  LI  FC  G +  A  + S+M+ KG P+ N+V +S +I        +  A DV+  
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNL 570

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +      P IV+++ LIDG C  G ME+A       +   + PDVVTY  L+ GYCK+G+
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             + + L+  ML   + P  +  S + D
Sbjct: 631 IDDGLILFREMLHKKVKPTTVTYSIVLD 658



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+ D+G+EPD +TY  II GY       E+ ++F K+T   L P 
Sbjct: 309 LCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPG 368

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF   + + CK GR  DA  +F  M  KG   ++V+YS L+ GY          +++ 
Sbjct: 369 IVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFH 428

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I  N   ++ILI    KRG+M+EA+  F       + PDVVTY+ LI  +C+ G
Sbjct: 429 SMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ +  M+  G+ P+ ++  +L
Sbjct: 489 RLADAMEKFSQMISIGLEPNTVVYHSL 515



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 35/239 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +   G  P I+T+N++I GYC + ++++A  + + +  V ++P+ +T+  L+ 
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK G++DD  ++F +ML K  K   VTYS ++DG F +    +A  ++ EM ++  + 
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFH------CALD------------------------ 160
           +I +Y IL+ GLC+  L +EA+  FH      C  D                        
Sbjct: 684 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLF 743

Query: 161 -----NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
                + L+P+V TY ++I    K G   EA  ++ SM ++G  P   LL+ +    LQ
Sbjct: 744 AAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 802



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 1/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H   + K+F ++T +GL P I+T+N+ +   C   R  +A ++F+ +T     P+ ++++
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYS 408

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+  +  EGR  D   +F  M +KG  AN   ++ LI  + K   M  A  V+ EM   
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+YS LI   C+ G + +A+  F   +   L P+ V Y  LI G+C  G   +A
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528

Query: 187 MQLYDSMLRNGI-MPDGLLLSTL 208
            +L   M+  GI  P+ +  S++
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSI 551



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 100/178 (56%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            PD++++NT+I G+     + +A  L  ++    ++P+ +T+  ++DA CK   MD A +
Sbjct: 261 SPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAEL 320

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M++KG + + +TY+ +I GY  S + K +  ++ +M    + P IV+++  +  LC
Sbjct: 321 VLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLC 380

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           K G  ++A   F        +PD+V+Y+IL+ GY   GR  +   L+ SM   GI+ +
Sbjct: 381 KHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVAN 438



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 1/184 (0%)

Query: 11  ALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +L  ++  +G+  P+I+ +++II   C+  R+ +A  +F  +  +  +P  +TF  LI
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLI 587

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +C  G+M+ A  +   M+  G + +VVTY+ L+ GY KS  +     ++ EM    + 
Sbjct: 588 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVK 647

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P  V+YSI++DGL   G    A   FH  +D+    D+ TY IL++G C+     EA+ L
Sbjct: 648 PTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 707

Query: 190 YDSM 193
           +  +
Sbjct: 708 FHKL 711



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 3/195 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTI 67
           D     F +L   GL    I  NT +   C   R DEAV  L  +++ +   PN+I++  
Sbjct: 173 DLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNT 232

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +I + C + R  +A  M  +M ++G +   +VV+++ +I G+FK   +  A ++  EM +
Sbjct: 233 VIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQ 292

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P++V+Y+ ++D LCK   M++A       +D  + PD +TY  +I GY  +G   E
Sbjct: 293 KGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKE 352

Query: 186 AMQLYDSMLRNGIMP 200
           + +++  M   G++P
Sbjct: 353 SAKMFRKMTSKGLIP 367



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 103/190 (54%), Gaps = 2/190 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTILIDA 71
           L  +++D G  P+ I+YNT+I   C  +R  EA+ + +++     +  P+ ++F  +I  
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           F K+G +  A  + ++M++KG + +VVTY+ ++D   K++ M  A  V  +M +  + P+
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            ++Y+ +I G    G  +E+   F       L+P +VT+   +   CK GR  +A +++ 
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 192 SMLRNGIMPD 201
            M   G MPD
Sbjct: 394 YMTTKGHMPD 403



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA K+F ++ D G   DI TY  ++ G C  +  DEA+ LF KL  +  K +      +I
Sbjct: 668 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVI 727

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +A  K  R ++A  +F+ +   G   NV TY  +I    K  +++ A  ++  M ++  +
Sbjct: 728 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCA 787

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKAGRPTEAMQ 188
           P+    + +I  L ++G + +A Y +   +D  ++  +  T ++L+  +   G+  E ++
Sbjct: 788 PSSRLLNDIIRMLLQKGDIVKAGY-YMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 846

Query: 189 L 189
            
Sbjct: 847 F 847



 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 4/158 (2%)

Query: 57  QLKPNSI-TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           ++ P S+ T+ IL+D  C+  R D     F+++L  G +   +  +  +     ++    
Sbjct: 150 RVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDE 209

Query: 116 AFDVY-EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAI 172
           A DV    M +    PN +SY+ +I  LC     +EAL              PDVV++  
Sbjct: 210 AVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 269

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +I G+ K G  ++A  L + M++ G+ PD +  +++ D
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVD 307


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E   + A K+  Q+   G+ P++ITYNT+I G+C + +L +A+ L   L    L P+
Sbjct: 313 LCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+  FCK+G    A  +  +M E+G K + +TY+ LID + +  NM+ A  +  
Sbjct: 373 LVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRS 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  ++P++ +YS+LI G C +G M EA   F   +   L P+ V Y  ++ GYCK G
Sbjct: 433 PMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEG 492

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A++L+  M    + P+
Sbjct: 493 SSYRALRLFREMEEKELPPN 512



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 117/206 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+     A KLF ++ +RG+  +I+TYNT+I G C   + +EA ++ +++    + PN I
Sbjct: 280 KDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLI 339

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID FC  G++  A  +   +  +G   ++VTY+ L+ G+ K  +   A  V +EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+ ++Y+ILID   +   ME+A+       +  L PDV TY++LI G+C  G+ 
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA +L+  M+   + P+ ++ +T+ 
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMV 485



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 103/202 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   L  RGL P ++TYN ++ G+C       A ++ +++    +KP+ IT+TI
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F +   M+ A  + S M E G   +V TYS LI G+     M  A  +++ M    
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ ++ G CK G    AL  F    +  L P+V +Y  +I   CK  +  EA 
Sbjct: 474 LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L + M+  GI P   +L+ ++
Sbjct: 534 GLVEKMIDTGIDPSDSILNLIS 555



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 106/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  LF ++   GL  +  TY  +I G        +  +++EK+    + PN  
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +++  CK+GR  DA  +F +M E+G   N+VTY+ LI G  +      A  V ++M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I+PN+++Y+ LIDG C  G + +AL          L P +VTY IL+ G+CK G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + A ++   M   GI P  +  + L D
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILID 416



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 10/221 (4%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C     ++ +  L  +L + G  P+++ Y T+I G C    +++A  LF ++   
Sbjct: 168 IVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKF 227

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L  N  T+T+LI    K G       M+ KM E G   N+ TY+C+++ + K    K A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDA 287

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           F +++EM E  +S NIV+Y+ LI GLC+     EA         + + P+++TY  LI G
Sbjct: 288 FKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDG 347

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +C  G+  +A+ L   +   G+ P      +L  YN+  SG
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSP------SLVTYNILVSG 382



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 102/185 (55%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D+ ++  +I G C    ++++  L  +L      PN + +T LID  CK G ++ A  +F
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M + G  AN  TY+ LI G FK+   K  F++YE+M E+ + PN+ +Y+ +++  CK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G  ++A   F    +  +  ++VTY  LI G C+  +  EA ++ D M  +GI P+ +  
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 206 STLAD 210
           +TL D
Sbjct: 342 NTLID 346



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 90/162 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+     A K+  ++ +RG++P  ITY  +I  +  ++ +++A+QL   +  + L P+  
Sbjct: 385 KKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVH 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI  FC +G+M++A+ +F  M+ K  + N V Y+ ++ GY K  +   A  ++ EM
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREM 504

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
            E  + PN+ SY  +I+ LCK    +EA       +D  + P
Sbjct: 505 EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 72/125 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A++L   + + GL PD+ TY+ +I G+C   +++EA +LF+ +   +L+PN + + 
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++  +CKEG    A  +F +M EK    NV +Y  +I+   K +  K A  + E+M + 
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542

Query: 127 NISPN 131
            I P+
Sbjct: 543 GIDPS 547


>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 108/201 (53%), Gaps = 4/201 (1%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            H+D A++LF  +     +PD  +YNT+I G C  +R  EA +LF ++    + P  +T+
Sbjct: 201 AHIDDAVRLFRNIP----KPDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTVVTY 256

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I+   +EG +DDA  MF +M  +G   NVVTYS LIDG  K     SA D+ E + +
Sbjct: 257 TTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAK 316

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               PN + YS +I+GLCK GL+ EA+            PD   +  LI G C AGR  E
Sbjct: 317 EVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVE 376

Query: 186 AMQLYDSMLRNGIMPDGLLLS 206
           A    D M+  G+ P+ +  S
Sbjct: 377 AANYLDEMVLAGVQPNRVTWS 397



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++  +CS     +D+AV+LF  +     K
Sbjct: 160 LVAHSHLPLAHSLLADMRASGFGPTTATYNVLLKAHCSDAAAHIDDAVRLFRNIP----K 215

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P++ ++  LID  C+  R  +A  +FS+M+E G    VVTY+ +I+   +   +  A ++
Sbjct: 216 PDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTVVTYTTIINWLAREGCLDDALEM 275

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    I+PN+V+YS LIDGLCK G    AL           LP+ + Y+ +I G CK
Sbjct: 276 FDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLPNTIIYSSVINGLCK 335

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   EAM++ D M   G  PD  L   L
Sbjct: 336 EGLLREAMEVLDRMRLQGRKPDAGLFGKL 364



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 6/182 (3%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG--RMDDATMMFS 86
           +Y  ++ G  + + L  A  L   +      P + T+ +L+ A C +    +DDA  +F 
Sbjct: 152 SYTAVLAGLVAHSHLPLAHSLLADMRASGFGPTTATYNVLLKAHCSDAAAHIDDAVRLFR 211

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            +    PK +  +Y+ LIDG  +      A +++ EM EN I+P +V+Y+ +I+ L + G
Sbjct: 212 NI----PKPDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTVVTYTTIINWLAREG 267

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++AL  F       + P+VVTY+ LI G CK GR   A+ L + + +   +P+ ++ S
Sbjct: 268 CLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLPNTIIYS 327

Query: 207 TL 208
           ++
Sbjct: 328 SV 329



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 7/208 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L +E  LD AL++F ++  RG+ P+++TY+++I G C   R   A+ L E+L      P
Sbjct: 262 WLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLP 321

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I ++ +I+  CKEG + +A  +  +M  +G K +   +  LI G   +     A +  
Sbjct: 322 NTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYL 381

Query: 121 EEMCENNISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           +EM    + PN V++S+       ++  LC +G +  A   +       +  +  T+ +L
Sbjct: 382 DEMVLAGVQPNRVTWSLHVRINVAVVTALCVKGEVGRAFQVYQSMRTRGISTEPSTFHLL 441

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +  + K     +A  +   ML    +P+
Sbjct: 442 VEFFSKKNHLEKAAHVVLDMLSERCIPE 469



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 6/189 (3%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI-TFTILIDAFCKEGRMDDA 81
           LEP  +T   ++  +C  +R  +A+QLF         P+S  ++T ++        +  A
Sbjct: 113 LEPPFLT---LLRAFCRTHRPLDALQLFRSAPSALSLPHSARSYTAVLAGLVAHSHLPLA 169

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G      TY+ L+  +    +  +  D    +  N   P+  SY+ LIDG
Sbjct: 170 HSLLADMRASGFGPTTATYNVLLKAH--CSDAAAHIDDAVRLFRNIPKPDACSYNTLIDG 227

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC+R    EA   F   ++N + P VVTY  +I    + G   +A++++D M R GI P+
Sbjct: 228 LCRRSRRVEAQELFSEMVENGIAPTVVTYTTIINWLAREGCLDDALEMFDEMGRRGIAPN 287

Query: 202 GLLLSTLAD 210
            +  S+L D
Sbjct: 288 VVTYSSLID 296



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKA-----NVVTYSCLIDGYFKSQNMKSAFDV 119
           F  L+ AFC+  R  DA  +F       P A     +  +Y+ ++ G     ++  A  +
Sbjct: 117 FLTLLRAFCRTHRPLDALQLF----RSAPSALSLPHSARSYTAVLAGLVAHSHLPLAHSL 172

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGL--MEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             +M  +   P   +Y++L+   C      +++A+  F     N   PD  +Y  LI G 
Sbjct: 173 LADMRASGFGPTTATYNVLLKAHCSDAAAHIDDAVRLFR----NIPKPDACSYNTLIDGL 228

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           C+  R  EA +L+  M+ NGI P  +  +T+ ++
Sbjct: 229 CRRSRRVEAQELFSEMVENGIAPTVVTYTTIINW 262


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 124/214 (57%), Gaps = 1/214 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++P+IITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  RM+DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+ ++  NG++PD    S +A+ NL   G
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAE-NLIEQG 703



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD +TY T+I   C   R+++A++ FE++   +L P +I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI + C   + D A  +  +ML++G   + + ++ +ID + K   +  +  +++ M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PNI++YS LIDG C  G M+EA       +   + PD VTY  LI GYCK  R 
Sbjct: 506 VRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 566 EDALVLFREMESSGVSPD 583



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+  TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  MF  M ++G K  + TY  L+ GY     +     + +
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SILI    K+G +++A+  F       L PD VTY  +I   CK+G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+   + P  ++ ++L
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSL 450



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTC 55
           +LI  C     LD      G +  +G   D I +  ++ G C+  R  +A+ +   ++T 
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNM 113
           +   PN  ++ IL+   C E R  +A  +   M + G     +VV+Y+ +I+G+FK  ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A+  Y EM +  I PN+V+Y+ +I  LCK   M++A+      + N ++P+  TY  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           + GYC +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + PN
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F+ILI A+ K+G++D A ++FSKM ++G   + VTY  +I    KS  ++ A   +E
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  +SP  + Y+ LI  LC     ++A       LD  +  D + +  +I  +CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  E+ +L+D M+R G+ P+ +  STL D
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLID 522



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 110/197 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A++ F Q+ D  L P  I YN++I   C  ++ D+A +L  ++    +  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K N++TYS LIDGY  +  M  A  + 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G CK   ME+AL  F     + + PD++TY I+++G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  +  +G
Sbjct: 598 RRTAAAKELYVGITESG 614



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL+L   + D G +  PD+++Y T+I G+     LD+A   + ++    + PN +T+  +
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSI 240

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A CK   MD A  + + M++ G   N  TY+ ++ GY  S   K A    ++M  + +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ L+D LCK G   EA   F       L P++ TY  L++GY   G   E   
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L D M+RNGI P+  + S L
Sbjct: 361 LLDLMVRNGIHPNHYVFSIL 380



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+++A+ LF ++    + P+ IT+ I
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++  + E G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+PDV TY+++     + G   E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+ SM  NG   +  +L+++    LQ
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQ 736



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 46/234 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-----FEKLTCVQLKPNSITF 65
           A  +F +L  RG    I   N   C    + R   A  +       +    ++ PN  T+
Sbjct: 38  ARHVFDELLRRGRGASIYGLN---CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY----- 120
            ILI + C  GR+D        +++KG + + + ++ L+ G    +    A D+      
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 121 ---------------EEMCENNIS------------------PNIVSYSILIDGLCKRGL 147
                          + +C+ N S                  P++VSY+ +I+G  K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +++A   +H  LD  +LP+VVTY  +I   CKA    +AM++  SM++NG+MP+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T+ G + ++ TYN I+ G C  N  DEA+++F+ L    L+  + TF I+I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K GR D+A  +F+ +   G   +V TYS + +   +   ++   D++  M EN  +
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            N    + ++  L +RG +  A
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRA 743



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVSY 135
           +DA  +F ++L +G  A++   +C +    +  +  +A   Y  M     + ++PN+ +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSML 194
            ILI   C  G ++    A    +      D + +  L++G C   R ++AM +    M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 195 RNGIMPD----GLLLSTLADYN 212
           + G +P+     +LL  L D N
Sbjct: 155 QLGCIPNVFSYNILLKGLCDEN 176



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L    L+ +  T+N +I     + R DEA  LF  L+   L P+  T++++
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +   ++G +++   +F  M E G  AN    + ++    +  ++  A      + E + 
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 129 SPNIVSYSILID 140
           S    + S+ +D
Sbjct: 756 SLEASTASLFLD 767


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K     A   L  ++ DR ++PD+  + T++ G+     LDEA+++F+ +    + P 
Sbjct: 456 LCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPG 515

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  FCK G+M DA    +KM       +  TYS +IDGY K  +M SA  ++ 
Sbjct: 516 IVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFG 575

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M ++   PN+++Y+ LI+G CK+  M  A   F       L+P+VVTY  L+ G+ KAG
Sbjct: 576 QMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAG 635

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P +A  +++ ML NG  P+
Sbjct: 636 KPEKATSIFELMLMNGCPPN 655



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 102/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+   LD A+K+F  +  +G++P I+ YN +I G+C   ++ +A+    K+  V   P+
Sbjct: 491 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPD 550

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ +ID + K+  M  A  MF +M++   K NV+TY+ LI+G+ K  +M  A  V+ 
Sbjct: 551 EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFR 610

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   ++ PN+V+Y+ L+ G  K G  E+A   F   L N   P+  T+  LI G     
Sbjct: 611 GMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTA 670

Query: 182 RPTEAMQLYDSM 193
                ++  DSM
Sbjct: 671 TSPVLIEEKDSM 682



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 110/202 (54%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ AA  LF ++ + G +PD+++Y   I G      +D A+ + EK+    + P++  + 
Sbjct: 392 YVKAAGMLF-RIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYN 450

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+   CK GR     ++ S+ML++  + +V  ++ L+DG+ ++  +  A  +++ +   
Sbjct: 451 VLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRK 510

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P IV Y+ +I G CK G M +AL   +   + H  PD  TY+ +I GY K    + A
Sbjct: 511 GVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSA 570

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           ++++  M+++   P+ +  ++L
Sbjct: 571 LKMFGQMMKHKFKPNVITYTSL 592



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 101/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL +  ++ ++G+ PD   YN ++ G C   R      L  ++    ++P+   F  
Sbjct: 427 IDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFAT 486

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D F + G +D+A  +F  ++ KG    +V Y+ +I G+ K   M  A     +M   +
Sbjct: 487 LMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVH 546

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+  +YS +IDG  K+  M  AL  F   + +   P+V+TY  LI G+CK      A 
Sbjct: 547 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAE 606

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +++  M    ++P+ +  +TL
Sbjct: 607 KVFRGMKSFDLVPNVVTYTTL 627



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 35/229 (15%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G  PDI TYNT+I   C   R+ EA +  EK     L PN  ++T L+ A+CK+G
Sbjct: 331 RMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG 390

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
               A  M  ++ E G K ++V+Y   I G      +  A  V E+M E  + P+   Y+
Sbjct: 391 DYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYN 450

Query: 137 ILIDGLCKRGL-----------------------------------MEEALYAFHCALDN 161
           +L+ GLCK G                                    ++EA+  F   +  
Sbjct: 451 VLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRK 510

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + P +V Y  +I+G+CK G+ T+A+   + M      PD    ST+ D
Sbjct: 511 GVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVID 559



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 91/194 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++   +L      +G  P ++ YN II GYC    L  A +  ++L    + P   T+  
Sbjct: 217 IEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGA 276

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FCK G  +    + ++M  +G   NV  ++ +ID  FK   +  A +    M E  
Sbjct: 277 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMG 336

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+I +Y+ +I+  CK G ++EA      A +  LLP+  +Y  L+  YCK G   +A 
Sbjct: 337 CGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAA 396

Query: 188 QLYDSMLRNGIMPD 201
            +   +   G  PD
Sbjct: 397 GMLFRIAEIGEKPD 410



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 93/207 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    +A  +L  ++  RGL  ++  +N +I        + +A +   ++  +   P+  
Sbjct: 283 KAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDIT 342

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I+  CK GR+ +A     K  E+G   N  +Y+ L+  Y K  +   A  +   +
Sbjct: 343 TYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRI 402

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P++VSY   I G+   G ++ AL      ++  + PD   Y +L+ G CK GR 
Sbjct: 403 AEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRF 462

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                L   ML   + PD  + +TL D
Sbjct: 463 PAMKLLLSEMLDRNVQPDVYVFATLMD 489



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 92/205 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A +   +L  +G+ P + TY  +I G+C     +   QL  ++    L  N  
Sbjct: 248 KKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVK 307

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  +IDA  K G +  A     +M E G   ++ TY+ +I+   K   +K A +  E+ 
Sbjct: 308 VFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKA 367

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  SY+ L+   CK+G   +A        +    PD+V+Y   I G    G  
Sbjct: 368 KERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEI 427

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+ + + M+  G+ PD  + + L
Sbjct: 428 DVALMVREKMMEKGVFPDAQIYNVL 452



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 49/241 (20%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  + +ALK+FGQ+     +P++ITY ++I G+C    +  A ++F  +    L PN 
Sbjct: 562 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNV 621

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS------------ 110
           +T+T L+  F K G+ + AT +F  ML  G   N  T+  LI+G   +            
Sbjct: 622 VTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDS 681

Query: 111 -QNMKS-AFDVYEEMCENNISPNIVSYS--------------------------ILID-- 140
            +N +S   D +  M        I +Y+                           LID  
Sbjct: 682 MENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSV 741

Query: 141 -------GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
                  GLC +G  +E      C L+   L   V Y++ +  Y   GR +EA  +  ++
Sbjct: 742 CFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTL 801

Query: 194 L 194
           +
Sbjct: 802 I 802



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 40/234 (17%)

Query: 8   LDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI--- 63
           LD AL+LF  + +     P ++  N+++ G     ++D A+QL++K+        ++   
Sbjct: 142 LDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDN 201

Query: 64  -TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T +I++   C  G++++   +      KG   +VV Y+ +IDGY K  +++ A    +E
Sbjct: 202 YTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKE 261

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL--- 164
           +    + P + +Y  LI+G CK G  E                 +  F+  +D       
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGL 321

Query: 165 -----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                            PD+ TY  +I   CK GR  EA +  +     G++P+
Sbjct: 322 VTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPN 375



 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFTILIDAFCKEGRM 78
           L+P    ++ +I  Y     LD A+QLF    E   C+   P  +    L++   K G++
Sbjct: 122 LKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCL---PTVVASNSLLNGLVKSGKV 178

Query: 79  DDATMMFSKMLE----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           D A  ++ KML+     G   +  T S ++ G      ++    + ++       P++V 
Sbjct: 179 DVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVF 238

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+++IDG CK+G ++ A           +LP V TY  LI G+CKAG      QL   M 
Sbjct: 239 YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 298

Query: 195 RNGI 198
             G+
Sbjct: 299 ARGL 302


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+KG   N VT++ LI G+ K++ +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++SP++++Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKITYTTLIDGCCK 323

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 324 EGDLETAFEHRKRMIQENIRLDDVAYTAL 352



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGHVP 414



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 109/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN +TFT 
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK  R+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +EM    
Sbjct: 247 LIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAE 366

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 367 KVLREMLSVGLKPD 380



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ D G    +  +N ++  +C    +  A  +F  +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A  +++
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LI G CK   ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 231 EMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 291 DLKQAHDLIDEMSMKGLKPDKITYTTLID 319



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  +  +ML  G K +  TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++VS
Sbjct: 406 EMQRDGHVPSVVS 418



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +     ++  ++IL+   CK G +  A   F+      L P VV++  L+ GY + G   
Sbjct: 129 DCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +M  +G+ PD    S L
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVL 212


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+ L  ++ +R L P +ITYN++I G C +N L+ A +L   +    L P+
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++ ID  CKEGR+++A  +F  +  KG KAN V Y+ LIDGY K   +  A+ + E
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +   PN  +Y++LI+GLCK   M+EA       L   + P VVTY ILI    K G
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A+++++ M+  G  PD
Sbjct: 594 AFDHALKVFNHMVSLGYQPD 613



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 112/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ ALKLF  +T+    P + TY  +I       R  EA+ LF ++     +PN  T+T
Sbjct: 279 RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYT 338

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID  CKE +MD+A  M S+M EKG   +VVTY+ LIDGY K   +  AF++ + M  N
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  PN  +Y+ LI GLCK+  + +A+   +  L+  L P ++TY  LI G CK      A
Sbjct: 399 SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA 458

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   M  NG++PD    S   D
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFID 482



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A K+  +++++GL P ++TYN +I GYC    +D+A ++ + +      PN
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  LI   CK+ ++  A  + +KMLE+    +++TY+ LI G  K  +++SA+ +  
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M EN + P+  +YS+ ID LCK G +EEA   F       +  + V Y  LI GYCK G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A  L + ML +  +P+    + L +
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIE 552



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 112/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++ ++G EP++ TY  +I G C  N++DEA ++  +++   L P+ +T+  LID
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CKEG +DDA  +   M       N  TY+ LI G  K + +  A  +  +M E  +SP
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y+ LI G CK   +E A        +N L+PD  TY++ I   CK GR  EA  L+
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           DS+   G+  + ++ + L D
Sbjct: 498 DSVKAKGVKANEVIYTALID 517



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 110/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++F  +  +G + + ++Y  +I G C   R++EA++LF  +T     P   T+T+
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A    GR  +A  +F++M EKG + NV TY+ LIDG  K   M  A  +  EM E  
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y+ LIDG CK G++++A         N   P+  TY  LI G CK  +  +AM
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L + ML   + P  +  ++L
Sbjct: 425 ALLNKMLERKLSPSLITYNSL 445



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 98/185 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++   GL PD  TY ++I G+C    +D A ++F  +     + N +++T LI   C+ G
Sbjct: 219 KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAG 278

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R+++A  +F+ M E      V TY+ LI     S     A +++ EM E    PN+ +Y+
Sbjct: 279 RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYT 338

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           +LIDGLCK   M+EA        +  L+P VVTY  LI GYCK G   +A ++ D M  N
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398

Query: 197 GIMPD 201
              P+
Sbjct: 399 SCGPN 403



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 102/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +L   + + GL PD  TY+  I   C   R++EA  LF+ +    +K N + +T 
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CK G++D A  +  +ML      N  TY+ LI+G  K + MK A  +  +M    
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P +V+Y+ILI  + K G  + AL  F+  +     PDV TY   +  Y   G   E  
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            +   M   GI+PD +  + L D
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLID 657



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 104/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  LF  +  +G++ + + Y  +I GYC + ++D A  L E++      PN
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T+ +LI+  CKE +M +A+ + +KML  G K  VVTY+ LI    K      A  V+ 
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ +Y+  +     +G++EE         +  +LPD+VTY +LI GY + G
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A      M+  G  P   ++S L
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSLYIVSIL 690



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D    ++ +L +  + P+I T+N ++ GYC +  + EA     K+    L P++ T+T 
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTS 234

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+   +D+A  +F  M +KG + N V+Y+ LI G  ++  +  A  ++ +M E+N
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P + +Y++LI  L   G   EAL  F+   +    P+V TY +LI G CK  +  EA 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++   M   G++P  +  + L D
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALID 377



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 18/212 (8%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  L  ++ +    P+  TYN +I G C   ++ EA  L  K+  + +KP  +T+TI
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K+G  D A  +F+ M+  G + +V TY+  +  YF    ++   DV  +M E  
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE-- 185
           I P++V+Y++LIDG  + GL   A     C +D    P +   +ILI+      R  E  
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704

Query: 186 ----------------AMQLYDSMLRNGIMPD 201
                           A++L++ M+ +G   D
Sbjct: 705 SEIGIDSVSNTLEYEIALKLFEKMVEHGCTID 736



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 3/203 (1%)

Query: 11  ALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            L++F ++   G    +P +  YNTI+        +DE   ++ +L   Q+ PN  TF  
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++ +CK G + +A +  SK+++ G   +  TY+ LI G+ +++ + +A++V+  M +  
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N VSY+ LI GLC+ G + EAL  F    +++  P V TY +LI     +GR  EA+
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L++ M   G  P+    + L D
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLID 342



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 18/227 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  L  ++   G++P ++TY  +I         D A+++F  +  +  +P+
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T  + A+  +G +++   + +KM E+G   ++VTY+ LIDGY +      AFD  +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE------------------ALYAFHCALDNHL 163
            M +    P++   SILI  L     M+E                  AL  F   +++  
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGC 733

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             DV  Y  LI G+C+  R  EA  L   M   G+ P   + ++L D
Sbjct: 734 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + ALKLF ++ + G   D+  Y  +I G+C   RL+EA  L   +    + P+   +  L
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D  CK G   +A  +   M+E G    + +Y  L+ G +   + + A  V+  +     
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 838

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           + + V++ +LIDGL KR L++E         +    P+ +TY++LI G
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 18/211 (8%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDE------------------AVQLFEKLTCVQLK 59
           + D G +P +   + +I      NR+ E                  A++LFEK+      
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCT 734

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            +   +  LI  FC++ R+++A  +   M E+G   +   Y+ L+D   K      A  +
Sbjct: 735 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 794

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            + M EN + P + SY +L+ GL   G  E+A   FH  L      D V + +LI G  K
Sbjct: 795 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 854

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                E  +L D M   G  P+ L  S L +
Sbjct: 855 RDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 119/207 (57%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   ++ AL+ F ++ DR   P++ITY+ +I G C  NR+ +AV+L E +      P+
Sbjct: 89  LCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+TIL+D  CKE ++  A  +  +ML+ G   N+VTY+ L+ G  +++ +  A  +  
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M     +PN+V+Y  LIDGLCK G +++A       +D    PD++ Y +LI G CKA 
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  E++ L    +  GI PD +  S++
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSV 294



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  + AA ++  ++ D G  P+++TYN+++ G C   R+ +A+ L   +TC    PN
Sbjct: 158 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 217

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK GR+ DA  M + M++KG   +++ Y+ LI+G  K+  +  +  +  
Sbjct: 218 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 277

Query: 122 EMCENNISPNIVSYS-----------------------------------ILIDGLCKRG 146
                 I P++V+YS                                    LIDGLCK G
Sbjct: 278 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 337

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++EA   +     +    DVVTY+ LI G CKAGR  EA  L   M+R G  P  +  +
Sbjct: 338 KVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 397

Query: 207 TL 208
           +L
Sbjct: 398 SL 399



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D ++ L  +    G++PD++TY+++I G C  NRLDEA +L   +      P+
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I ++ LID  CK G++D+A  ++  M   G  A+VVTYS LIDG  K+  +  A  +  
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+ ++Y+ LI GLC    ++EA+        ++  P  VTY ILI G C+  
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 442

Query: 182 R-PTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  + A+  +  M+ NG++PD +  S L
Sbjct: 443 RVDSAALDYFQEMIDNGVIPDHITYSIL 470



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 110/184 (59%), Gaps = 2/184 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D G EP+++TYN++I G C  N  D A +LFE +  V+  P+ +T+  L+D   + G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           ++ A  +F +ML++    +V++++ L+ G  ++  +++A + + +M ++  SPN+++YS+
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LIDGLCK   + +A+            PDV+TY IL+ G CK  +   A ++   ML  G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 198 IMPD 201
            +P+
Sbjct: 179 CVPN 182



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 115/198 (58%), Gaps = 2/198 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   LD A +L   +  RG  PD+I Y+T+I G C   ++DEA  L+E +T      +
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK GR+D+A ++ ++M+  G   + +TY+ LI G     ++  A ++ E
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM  +N +P+ V+Y+ILI G+C+   ++ A L  F   +DN ++PD +TY+IL+ G  K+
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKS 477

Query: 181 GRPTEAMQLY-DSMLRNG 197
               E   L  D M++ G
Sbjct: 478 KDLHELRHLVLDQMVQLG 495



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +   + D+G  PD++ YN +I G C  +++DE++ L  +     +KP+
Sbjct: 228 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 287

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +I   C+  R+D+A  +   +  +G   +V+ YS LIDG  K+  +  AFD+YE
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    ++V+YS LIDGLCK G ++EA       +     P  +TY  LI+G C   
Sbjct: 348 VMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 407

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA++L + M R+   P  +  + L
Sbjct: 408 HLDEAIELVEEMERSNCAPSAVTYNIL 434



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A +LF  +      P ++TYNT++ G     +L+ A+ LF+++   +   +
Sbjct: 20  LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML-DRRSHD 78

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I+F IL+   C+ G+++ A   F KM ++    NV+TYS LIDG  K+  +  A ++ E
Sbjct: 79  VISFNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLE 137

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     SP++++Y+IL+DGLCK   +  A       LD   +P++VTY  L+ G C+A 
Sbjct: 138 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 197

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R ++A+ L   M   G  P+ +   TL D
Sbjct: 198 RVSDALALMRDMTCRGCTPNVVTYGTLID 226


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 108/188 (57%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P+I TY  ++ G C  +++ EA  L + ++    +PN I +  LID FCK G++D+A M
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F+KM E+G   NV TYS LID  FK + +  A  V   M EN+ +PN++ Y+ +IDGLC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  +EA        +    P+VVTY  +I G+ KAG+  + ++L   M   G  P+ +
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 204 LLSTLADY 211
               L ++
Sbjct: 813 TYRVLINH 820



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  +  ++  +G  PD  TY+ +I   C+ +++D A  LFE++    + P+  T+TI
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G +  A   F +M+  G   NVVTY+ LI  Y K++ M SA +++E M    
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV----------------VTYA 171
             PN+V+Y+ LIDG CK G +E+A   +     N  +PDV                 TY 
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +  EA  L D M   G  P+ ++   L D
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 16/226 (7%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L     +D A  LF ++    + PD+ TY  +I  +C +  L +A + F+++      P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T LI A+ K  +M  A  +F  ML +G   NVVTY+ LIDG+ KS  ++ A  +Y
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608

Query: 121 EEMCEN---------------NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
             M  N               NI  PNI +Y  L+DGLCK   ++EA             
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P+ + Y  LI G+CK G+  EA  ++  M   G  P+    S+L D
Sbjct: 669 PNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC------SLNRLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++ D G +P  + YN +I G C      SL+ L+ A + + ++    +  N + 
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            + L    C  G+ + A  +  +M+ KG   +  TYS +I     +  + +AF ++EEM 
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N++ P++ +Y+ILID  CK GL+++A   F   + +   P+VVTY  LI  Y KA + +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L++ ML  G +P+ +  + L D + +S   ++ C
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 99/192 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L   ++  G EP+ I Y+ +I G+C + +LDEA  +F K++     PN
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID   K+ R+D A  + S+MLE     NV+ Y+ +IDG  K      A+ +  
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    PN+V+Y+ +IDG  K G +++ L            P+ VTY +LI   C AG
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 182 RPTEAMQLYDSM 193
              +A QL D M
Sbjct: 826 LLDDAHQLLDEM 837



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A K +G++ D  +  + +  + +    C   + ++A  +  ++      P++ T++ 
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSK 485

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   ++D+A ++F +M       +V TY+ LID + K   ++ A   ++EM  + 
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   M  A   F   L    +P+VVTY  LI G+CK+G+  +A 
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           Q+Y  M  N  +PD  +   + D N++
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIR 632



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 12/197 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD ALK+  ++ +    P++I Y  +I G C + + DEA +L   +      PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID F K G++D    +  +M  KG   N VTY  LI+    +  +  A  + +
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----GLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM +     ++  Y  +I+G  +      GL++E         +N  +P +  Y ILI  
Sbjct: 836 EMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE-------IAENVAVPIIPAYRILIDS 888

Query: 177 YCKAGRPTEAMQLYDSM 193
           +CKAGR   A++L+  M
Sbjct: 889 FCKAGRLELALELHKXM 905



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 41/249 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A+    ++      P+++TY  ++CG     +L    ++   +      P+   F  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------------ 115
           LI A+C+ G    A  +  KM + G +   V Y+ LI G   ++ + S            
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 116 -----------------------------AFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                        A+ +  EM      P+  +YS +I  LC   
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++ A   F     NH++PDV TY ILI  +CK G   +A + +D M+R+G  P+ +  +
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 207 TLADYNLQS 215
            L    L++
Sbjct: 555 ALIHAYLKA 563



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D + Y  +I G C  +  +EA+    ++      PN +T+ IL+    ++ ++     + 
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           S M+ +G   +   ++ LI  Y +S +   A+ + ++M +    P  V Y+ILI G+C  
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  ++E A  A+   LD H++ + V  + L R  C AG+  +A  +   M+  G +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 200 PD 201
           PD
Sbjct: 478 PD 479



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LI++C      + AL+  G+L D G +P  +TYN ++  +   +RLD A  +  +++  
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
               +  T    +   CK GR  +A  +  K   +  K + V Y+ +I G  ++   + A
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D    M  ++  PN+V+Y IL+ G  ++  +          +     P    +  LI  
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           YC++G  + A +L   M   G  P
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQP 402



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N +I   C     + A++   +L  +  KP+ +T+  L+  F +  R+D A ++  +M +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   +  T  C +    K+   + A  + E   +     + V Y+ +I GLC+  L EE
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+        +  +P+VVTY IL+ G  +  +     ++   M+  G  P   + ++L
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 35/216 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A +L   + ++G  P+++TY  +I G+    ++D+ ++L  ++      PN
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK-GPK-------------------------- 94
            +T+ +LI+  C  G +DDA  +  +M +   PK                          
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 95  -ANVV-----TYSCLIDGYFKSQNMKSAFDVYEEM--CENNISPNIVSYSILIDGLCKRG 146
             NV       Y  LID + K+  ++ A ++++ M  C +  + +   YS LI+ L    
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            +++A   +   +    +P++  +  L++G  +  R
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 119/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ Q+  + + PD  T N++I G+C + +L EAV L  K+    + P   TF+I
Sbjct: 226 VNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSI 285

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DAFCKEG++ +A MM    ++K    +VVTY+ L+DGY   + +  A D+++ M    
Sbjct: 286 LVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRG 345

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N+ SY+ +I+GLCK  +++EA+  F       ++P+VVTY  LI G  K G+ +  +
Sbjct: 346 VIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVL 405

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L D M   G  P+ +  +++ D
Sbjct: 406 KLVDEMHDRGQPPNIITYNSILD 428



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 113/201 (56%), Gaps = 2/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  +  RG+  ++ +Y T+I G C +  +DEAV LFE++ C ++ PN
Sbjct: 327 LVKE--INKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPN 384

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID   K G++     +  +M ++G   N++TY+ ++D   K+ ++  A  +  
Sbjct: 385 VVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLT 444

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + +  I P++ +Y++LI GLC+ G +E+A   F   L      DV TY ++I+G+C  G
Sbjct: 445 NLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKG 504

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
               A+ L   M  NG +P+ 
Sbjct: 505 LFDAALALLSKMEDNGCIPNA 525



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 107/195 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL    ++  +G   D ++Y T+I G C + R+  A+QL +++    ++PN++ + 
Sbjct: 155 HIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 214

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK   ++DA  ++S+M+ K    +  T + LI G+     +K A  +  +M   
Sbjct: 215 MIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILE 274

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           NI+P + ++SIL+D  CK G ++EA       +   ++ DVVTY  L+ GYC      +A
Sbjct: 275 NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKA 334

Query: 187 MQLYDSMLRNGIMPD 201
             ++DSM   G++ +
Sbjct: 335 KDIFDSMASRGVIAN 349



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 109/194 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  + G    + +  D++TYN+++ GYC +  +++A  +F+ +    +  N  
Sbjct: 292 KEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQ 351

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T +I+  CK   +D+A  +F +M  +    NVVTY+ LIDG  K   +     + +EM
Sbjct: 352 SYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM 411

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PNI++Y+ ++D LCK   +++A+       D  + PD+ TY +LI+G C++G+ 
Sbjct: 412 HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKL 471

Query: 184 TEAMQLYDSMLRNG 197
            +A ++++ +L  G
Sbjct: 472 EDAQKVFEDLLVKG 485



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 109/200 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +  +FG++  +G +P+ IT+NT+I G C    + +A+   +K+       + +++  LI+
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+  A  +  ++  K  + N V Y+ +ID   K++ +  AFD+Y +M    ISP
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  + + LI G C  G ++EA+   H  +  ++ P + T++IL+  +CK G+  EA  + 
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
              ++  I+ D +  ++L D
Sbjct: 304 GVTMKKDIILDVVTYNSLMD 323



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 106/194 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  R + P+++TYN++I G   L ++   ++L +++      PN IT+  
Sbjct: 366 VDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNS 425

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++DA CK   +D A  + + + ++G + ++ TY+ LI G  +S  ++ A  V+E++    
Sbjct: 426 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKG 485

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + ++ +Y+++I G C +GL + AL       DN  +P+  TY I+I    +      A 
Sbjct: 486 YNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAE 545

Query: 188 QLYDSMLRNGIMPD 201
           +L   M+  G++ +
Sbjct: 546 KLLREMIARGLLDE 559



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   AL L  Q+   G+  D  T+N +I  +  L     +  +F K+      PN
Sbjct: 80  LVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPN 139

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITF  LI   C +G +  A     K++ +G   + V+Y  LI+G  K   + +A  + +
Sbjct: 140 AITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLK 199

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    + PN V Y+++ID +CK  L+ +A   +   +   + PD  T   LI G+C  G
Sbjct: 200 RVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMG 259

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA+ L   M+   I P     S L D
Sbjct: 260 QLKEAVGLLHKMILENINPRMYTFSILVD 288



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AAL+L  ++  + ++P+ + YN II   C    +++A  L+ ++   ++ P+
Sbjct: 185 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD 244

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T   LI  FC  G++ +A  +  KM+ +     + T+S L+D + K   +K A  +  
Sbjct: 245 DFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLG 304

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              + +I  ++V+Y+ L+DG C    + +A   F       ++ +V +Y  +I G CK  
Sbjct: 305 VTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIK 364

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA+ L++ M    I+P+ +  ++L D
Sbjct: 365 MVDEAVNLFEEMRCRKIIPNVVTYNSLID 393



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  +   P II +N I+           A+ L +++    +  +  TF ILI+ F + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              +  +F K+L+KG   N +T++ LI G     ++  A + ++++       + VSY  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI+GLCK G +  AL          + P+ V Y ++I   CKA    +A  LY  M+   
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 198 IMPDGLLLSTL 208
           I PD    ++L
Sbjct: 241 ISPDDFTCNSL 251



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 19/154 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A+ L   L D+G+ PD+ TY  +I G C   +L++A ++FE L       +
Sbjct: 430 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLD 489

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T++I  FC +G  D A  + SKM + G   N  TY  +I   F+    K   D+ E
Sbjct: 490 VYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFE----KDENDMAE 545

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++    I+               RGL++E  Y +
Sbjct: 546 KLLREMIA---------------RGLLDEKSYIY 564



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 85  FSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           F+ +L  K P   ++ ++ ++    K+++  +A  ++++M  N I  +  +++ILI+   
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + GL   +   F   L     P+ +T+  LI+G C  G   +A+  +D ++  G   D +
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 204 LLSTLAD 210
              TL +
Sbjct: 177 SYGTLIN 183


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 108/188 (57%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P+I TY  ++ G C  +++ EA  L + ++    +PN I +  LID FCK G++D+A M
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F+KM E+G   NV TYS LID  FK + +  A  V   M EN+ +PN++ Y+ +IDGLC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  +EA        +    P+VVTY  +I G+ KAG+  + ++L   M   G  P+ +
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 204 LLSTLADY 211
               L ++
Sbjct: 813 TYRVLINH 820



 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  +  ++  +G  PD  TY+ +I   C+ +++D A  LFE++    + P+  T+TI
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G +  A   F +M+  G   NVVTY+ LI  Y K++ M SA +++E M    
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV----------------VTYA 171
             PN+V+Y+ LIDG CK G +E+A   +     N  +PDV                 TY 
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +  EA  L D M   G  P+ ++   L D
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 16/226 (7%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L     +D A  LF ++    + PD+ TY  +I  +C +  L +A + F+++      P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T LI A+ K  +M  A  +F  ML +G   NVVTY+ LIDG+ KS  ++ A  +Y
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608

Query: 121 EEMCEN---------------NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
             M  N               NI  PNI +Y  L+DGLCK   ++EA             
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P+ + Y  LI G+CK G+  EA  ++  M   G  P+    S+L D
Sbjct: 669 PNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC------SLNRLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++ D G +P  + YN +I G C      SL+ L+ A + + ++    +  N + 
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            + L    C  G+ + A  +  +M+ KG   +  TYS +I     +  + +AF ++EEM 
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N++ P++ +Y+ILID  CK GL+++A   F   + +   P+VVTY  LI  Y KA + +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L++ ML  G +P+ +  + L D + +S   ++ C
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 99/192 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L   ++  G EP+ I Y+ +I G+C + +LDEA  +F K++     PN
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID   K+ R+D A  + S+MLE     NV+ Y+ +IDG  K      A+ +  
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    PN+V+Y+ +IDG  K G +++ L            P+ VTY +LI   C AG
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 182 RPTEAMQLYDSM 193
              +A QL D M
Sbjct: 826 LLDDAHQLLDEM 837



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A K +G++ D  +  + +  + +    C   + ++A  +  ++      P++ T++ 
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSK 485

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   ++D+A ++F +M       +V TY+ LID + K   ++ A   ++EM  + 
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   M  A   F   L    +P+VVTY  LI G+CK+G+  +A 
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           Q+Y  M  N  +PD  +   + D N++
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIR 632



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 12/197 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD ALK+  ++ +    P++I Y  +I G C + + DEA +L   +      PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID F K G++D    +  +M  KG   N VTY  LI+    +  +  A  + +
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----GLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM +     ++  Y  +I+G  +      GL++E         +N  +P +  Y ILI  
Sbjct: 836 EMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE-------IAENVAVPIIPAYRILIDS 888

Query: 177 YCKAGRPTEAMQLYDSM 193
           +CKAGR   A++L+  M
Sbjct: 889 FCKAGRLELALELHKEM 905



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 41/249 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A+    ++      P+++TY  ++CG     +L    ++   +      P+   F  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------------ 115
           LI A+C+ G    A  +  KM + G +   V Y+ LI G   ++ + S            
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 116 -----------------------------AFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                        A+ +  EM      P+  +YS +I  LC   
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++ A   F     NH++PDV TY ILI  +CK G   +A + +D M+R+G  P+ +  +
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 207 TLADYNLQS 215
            L    L++
Sbjct: 555 ALIHAYLKA 563



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D + Y  +I G C  +  +EA+    ++      PN +T+ IL+    ++ ++     + 
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           S M+ +G   +   ++ LI  Y +S +   A+ + ++M +    P  V Y+ILI G+C  
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  ++E A  A+   LD H++ + V  + L R  C AG+  +A  +   M+  G +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 200 PD 201
           PD
Sbjct: 478 PD 479



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LI++C      + AL+  G+L D G +P  +TYN ++  +   +RLD A  +  +++  
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
               +  T    +   CK GR  +A  +  K   +  K + V Y+ +I G  ++   + A
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D    M  ++  PN+V+Y IL+ G  ++  +          +     P    +  LI  
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           YC++G  + A +L   M   G  P
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQP 402



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N +I   C     + A++   +L  +  KP+ +T+  L+  F +  R+D A ++  +M +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   +  T  C +    K+   + A  + E   +     + V Y+ +I GLC+  L EE
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+        +  +P+VVTY IL+ G  +  +     ++   M+  G  P   + ++L
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 35/189 (18%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK---- 59
           K   +D  L+L  Q+  +G  P+ +TY  +I   C+   LD+A QL +++          
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 60  -----------------------------PNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                        P    + ILID+FCK GR++ A  +  +M  
Sbjct: 848 GYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS 907

Query: 91  --KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                 A+   YS LI+    +  +  AF++Y +M +    P +  +  L+ GL +    
Sbjct: 908 CTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRW 967

Query: 149 EEALYAFHC 157
           EEAL    C
Sbjct: 968 EEALQLSDC 976


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 108/188 (57%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P+I TY  ++ G C  +++ EA  L + ++    +PN I +  LID FCK G++D+A M
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F+KM E+G   NV TYS LID  FK + +  A  V   M EN+ +PN++ Y+ +IDGLC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  +EA        +    P+VVTY  +I G+ KAG+  + ++L   M   G  P+ +
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 204 LLSTLADY 211
               L ++
Sbjct: 813 TYRVLINH 820



 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  +  ++  +G  PD  TY+ +I   C+ +++D A  LFE++    + P+  T+TI
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G +  A   F +M+  G   NVVTY+ LI  Y K++ M SA +++E M    
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV----------------VTYA 171
             PN+V+Y+ LIDG CK G +E+A   +     N  +PDV                 TY 
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +  EA  L D M   G  P+ ++   L D
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 16/226 (7%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L     +D A  LF ++    + PD+ TY  +I  +C +  L +A + F+++      P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T LI A+ K  +M  A  +F  ML +G   NVVTY+ LIDG+ KS  ++ A  +Y
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608

Query: 121 EEMCEN---------------NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
             M  N               NI  PNI +Y  L+DGLCK   ++EA             
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P+ + Y  LI G+CK G+  EA  ++  M   G  P+    S+L D
Sbjct: 669 PNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC------SLNRLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++ D G +P  + YN +I G C      SL+ L+ A + + ++    +  N + 
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            + L    C  G+ + A  +  +M+ KG   +  TYS +I     +  + +AF ++EEM 
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            N++ P++ +Y+ILID  CK GL+++A   F   + +   P+VVTY  LI  Y KA + +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L++ ML  G +P+ +  + L D + +S   ++ C
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 99/192 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L   ++  G EP+ I Y+ +I G+C + +LDEA  +F K++     PN
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID   K+ R+D A  + S+MLE     NV+ Y+ +IDG  K      A+ +  
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    PN+V+Y+ +IDG  K G +++ L            P+ VTY +LI   C AG
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 182 RPTEAMQLYDSM 193
              +A QL D M
Sbjct: 826 LLDDAHQLLDEM 837



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A K +G++ D  +  + +  + +    C   + ++A  +  ++      P++ T++ 
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSK 485

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   ++D+A ++F +M       +V TY+ LID + K   ++ A   ++EM  + 
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   M  A   F   L    +P+VVTY  LI G+CK+G+  +A 
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           Q+Y  M  N  +PD  +   + D N++
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIR 632



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 12/197 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD ALK+  ++ +    P++I Y  +I G C + + DEA +L   +      PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID F K G++D    +  +M  KG   N VTY  LI+    +  +  A  + +
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----GLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM +     ++  Y  +I+G  +      GL++E         +N  +P +  Y ILI  
Sbjct: 836 EMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE-------IAENVAVPIIPAYRILIDS 888

Query: 177 YCKAGRPTEAMQLYDSM 193
           +CKAGR   A++L+  M
Sbjct: 889 FCKAGRLELALELHKEM 905



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 41/249 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A+    ++      P+++TY  ++CG     +L    ++   +      P+   F  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------------ 115
           LI A+C+ G    A  +  KM + G +   V Y+ LI G   ++ + S            
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 116 -----------------------------AFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                        A+ +  EM      P+  +YS +I  LC   
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++ A   F     NH++PDV TY ILI  +CK G   +A + +D M+R+G  P+ +  +
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 207 TLADYNLQS 215
            L    L++
Sbjct: 555 ALIHAYLKA 563



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D + Y  +I G C  +  +EA+    ++      PN +T+ IL+    ++ ++     + 
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           S M+ +G   +   ++ LI  Y +S +   A+ + ++M +    P  V Y+ILI G+C  
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 146 ------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  ++E A  A+   LD H++ + V  + L R  C AG+  +A  +   M+  G +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 200 PD 201
           PD
Sbjct: 478 PD 479



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LI++C      + AL+  G+L D G +P  +TYN ++  +   +RLD A  +  +++  
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
               +  T    +   CK GR  +A  +  K   +  K + V Y+ +I G  ++   + A
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D    M  ++  PN+V+Y IL+ G  ++  +          +     P    +  LI  
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           YC++G  + A +L   M   G  P
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQP 402



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N +I   C     + A++   +L  +  KP+ +T+  L+  F +  R+D A ++  +M +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   +  T  C +    K+   + A  + E   +     + V Y+ +I GLC+  L EE
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+        +  +P+VVTY IL+ G  +  +     ++   M+  G  P   + ++L
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 35/189 (18%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK---- 59
           K   +D  L+L  Q+  +G  P+ +TY  +I   C+   LD+A QL +++          
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 60  -----------------------------PNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                        P    + ILID+FCK GR++ A  +  +M  
Sbjct: 848 GYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS 907

Query: 91  --KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                 A+   YS LI+    +  +  AF++Y +M +    P +  +  L+ GL +    
Sbjct: 908 CTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRW 967

Query: 149 EEALYAFHC 157
           EEAL    C
Sbjct: 968 EEALQLSDC 976


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 118/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L   +    ++P+  
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 ETAFEYRKIMIKENIRLDDVAYTAL 352



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 112/196 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGI 198
             +A ++   ML  G+
Sbjct: 362 SVDAEKMLREMLSVGL 377



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L  ++ TY ++I  +CK G
Sbjct: 336 IMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLMKEMQRDGYVP 414



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 103/189 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 2/204 (0%)

Query: 9   DAALKLFGQ-LTDRGLE-PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D+A  +F   L  RG +  DI  ++ +I  Y     L +A++        + +    T  
Sbjct: 46  DSASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCR 105

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++   K          + + LE G  A++  ++ L+  + K   ++ A  V++ + + 
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKW 165

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++VS++ L++G  K G + E     +    + + PDV TY++LI G CK  +  +A
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L+D ML NG++P+G+  +TL D
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLID 249



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  + +    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418


>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rubella]
          Length = 394

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 112/195 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 175 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +EM    
Sbjct: 235 LIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 294

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 295 LKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 354

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 355 KMLREMLSVGLKPDA 369



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 136 KERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 195

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQM 255

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKITYTALIDGCCK 311

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 312 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 340



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 107/188 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 204 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPD 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 264 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRK 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 324 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 383

Query: 182 RPTEAMQL 189
              +  +L
Sbjct: 384 DVWKGSKL 391



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 99  LMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPS 158

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 159 VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 218

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ AL  +   L   LLPD++TY  LI G CK G
Sbjct: 219 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKG 278

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  + L D
Sbjct: 279 DLKQAHDLIDEMSMKGLKPDKITYTALID 307



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 63/145 (43%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  Y+E+
Sbjct: 56  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 115

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+    ++  ++IL+   CK   +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 116 LESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 175

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L  +M  +G+ PD    S L
Sbjct: 176 DEGFRLKSAMHASGVQPDVYTYSVL 200


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 SVDAEKMLREMLSVGLKPD 380



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++SP++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 323

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 324 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 352



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD+ TY ++I  +CK G
Sbjct: 336 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M RNG  P      ++  YN+  +G
Sbjct: 396 DVWKGSKLLKEMQRNGHAP------SVVTYNVLMNG 425



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 101/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ +++  L++ + + G +D+ 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S ML  G + +V TYS LI+G  K   M  A ++++EM    + PN V+++ LIDG
Sbjct: 191 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
               +TL D
Sbjct: 311 KFTYTTLID 319



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 65/144 (45%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   ++   E        T   +++   K +  K  +  YE++ 
Sbjct: 69  FSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVL 212


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+     N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFKYRKRMIKENIRLDDVAYTAL 352



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D  L P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF   +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 95/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML N ++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A + F ++  +GL  D +TY T+I G C    L+EA +L +++   +L  + +T+T+
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CK G+M +A  M + M+++G   NVVTY+ L DG  K  ++++A ++  EM    
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N  +Y+ LI+GLCK G +E+A+          L PDV TY  LI   CK+G    A 
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            L   ML  GI P      T+  YN+  +G
Sbjct: 557 SLLQEMLDKGIKP------TIVTYNVLMNG 580



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L+ A KL  ++  R L+ D +TY  +I GYC   ++ EA Q+   +    + PN
Sbjct: 406 LCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPN 465

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L D  CK+G +  A  +  +M  KG + N  TY+ LI+G  K+  ++ A     
Sbjct: 466 VVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMA 525

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P++ +Y+ LID LCK G ++ A       LD  + P +VTY +L+ G+C +G
Sbjct: 526 DMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 585

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R     +L D ML   I P+    ++L
Sbjct: 586 RVEGGKKLLDWMLEKNIHPNAATYNSL 612



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 110/197 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  + AA +L  +++++GLE +  TYN++I G C    L++A++    +    LKP+
Sbjct: 476 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPD 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LIDA CK G +D A  +  +ML+KG K  +VTY+ L++G+  S  ++    + +
Sbjct: 536 VYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E NI PN  +Y+ L+   C    M+     +       + P+  TY ILI+G+CKA 
Sbjct: 596 WMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKAR 655

Query: 182 RPTEAMQLYDSMLRNGI 198
              EA+  +D M++ G 
Sbjct: 656 NMKEALYFHDEMIQKGF 672



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 113/200 (56%), Gaps = 3/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++      PD++TY  +I G+C+L  L+ AV+L +++    ++PN+  +T ++ 
Sbjct: 278 ARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVA 334

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +G + DA  +   M+++    +   Y+ ++ G+    ++ SA   ++EM    ++ 
Sbjct: 335 LLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT 394

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ +I+GLC+   +EEA           L  D VTY +LI GYCK G+  EA Q++
Sbjct: 395 DGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMH 454

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           ++M++ G+ P+ +  + L D
Sbjct: 455 NAMVQRGVTPNVVTYTALTD 474



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 105/212 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A++    +    L+PD+ TY T+I   C    LD A  L +++    +KP 
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +L++ FC  GR++    +   MLEK    N  TY+ L+  Y    NMKS  ++Y+
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   ++ PN  +Y+ILI G CK   M+EALY     +         +Y+ LIR   K  
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           +  EA +L+  M + G+  +  +     D N 
Sbjct: 691 KFVEARELFHDMRKEGLTAESDVYDFYIDLNF 722



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 105/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++   +  R +  D   Y T++ G+C+   L  A + F+++    L  + +T+T +I+
Sbjct: 345 ALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMIN 404

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+   +++A  +  +M  +    + VTY+ LIDGY K   M  AF ++  M +  ++P
Sbjct: 405 GLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTP 464

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ L DGLCK+G ++ A    H   +  L  +  TY  LI G CKAG   +AM+  
Sbjct: 465 NVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTM 524

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M    + PD    +TL D
Sbjct: 525 ADMDTACLKPDVYTYTTLID 544



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 100/191 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+KL  ++   G+EP+   Y +++   C    + +A+++ E +   ++  +   +T 
Sbjct: 307 LENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTT 366

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  FC +G +  A   F +M  KG   + VTY+ +I+G  ++  ++ A  + +EM    
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  + V+Y++LIDG CKRG M EA    +  +   + P+VVTY  L  G CK G    A 
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486

Query: 188 QLYDSMLRNGI 198
           +L   M   G+
Sbjct: 487 ELLHEMSNKGL 497



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 11/195 (5%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  +L   G+ P     N ++    S   LDEA++LF++L       N  ++ IL+ A C
Sbjct: 219 LLRRLRQYGISPSPEACNAVL----SRLPLDEAIELFQELP----HKNVCSYNILLKALC 270

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             GR+ DA  +F +M       +VVTY  LI G+     +++A  + +EM    + PN  
Sbjct: 271 DAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            Y+ ++  LC +G + +AL      +   ++ D   Y  ++ G+C  G    A + +D M
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 194 LRNGIMPDGLLLSTL 208
            R G+  DG+  +T+
Sbjct: 388 QRKGLATDGVTYTTM 402



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 61/124 (49%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E ++ +  +++  +  R + P+  TYN +I G+C    + EA+   +++     +  + +
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATS 678

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ LI    K+ +  +A  +F  M ++G  A    Y   ID  F   N++S   + +E+ 
Sbjct: 679 YSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738

Query: 125 ENNI 128
           E +I
Sbjct: 739 EASI 742


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 112/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G+EPD+ TY+ +I G C  +++D A +LF+++    L PN +TFT 
Sbjct: 179 LDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTT 238

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +   A+++TY+ LI G  K  ++K A ++ +EM    
Sbjct: 239 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKG 298

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 299 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAE 358

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 359 KMLREMLSVGLKPD 372



 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 140 KEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVY 199

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE ++D A  +F +ML+KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 200 TYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 259

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++S ++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 260 LSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDL 319

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D ++ +TL
Sbjct: 320 ETAFEHRKRMIQENIRLDDVVYTTL 344



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++    L  +
Sbjct: 208 LCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSAD 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 268 LITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRK 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 328 RMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 387

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 388 DVWTGSKLLKEMQRDGHVP 406



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 103 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPS 162

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + S M   G + +V TYS LI+G  K   +  A ++++
Sbjct: 163 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFD 222

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L  D++TY  LI G CK G
Sbjct: 223 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKG 282

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 283 DLKQAQNLIDEMRMKGLKPDKITYTTLID 311



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 278 LCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLD 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++ +   + +
Sbjct: 338 DVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLK 397

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 398 EMQRDGHVPSVVT 410



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 35/188 (18%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L+ +   F+ LI A+ + G + DA   +    E        T   +++   K +  K  +
Sbjct: 54  LRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVW 113

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNH 162
             Y+E+ E     ++  ++IL+   CK G +  A               + +F+  ++ +
Sbjct: 114 GFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGY 173

Query: 163 LL--------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           +                     PDV TY++LI G CK  +   A +L+D ML  G++P+G
Sbjct: 174 IRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNG 233

Query: 203 LLLSTLAD 210
           +  +TL D
Sbjct: 234 VTFTTLID 241


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 110/193 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +   G+ P++ +YN +I G C   R+DEA+ L  ++    + P+++T+  LID
Sbjct: 237 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 296

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR+  A  + ++M  +G  A+VVTY+ L+D   K+QN+  A  ++ +M E  I P
Sbjct: 297 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 356

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + +Y+ LIDGLCK G ++ A   F   L      DV TY ++I G CK G   EA+ + 
Sbjct: 357 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 416

Query: 191 DSMLRNGIMPDGL 203
             M  NG +P+ +
Sbjct: 417 SKMEDNGCIPNAV 429



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 2/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL   + DR   P+++ Y+ II G C    ++EA  L+ ++   ++ PN IT+  LI 
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFC  G++  A  +  +M+ K    +V T+S LID   K    K+A  ++  M +  ++P
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNP 251

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ SY+I+I+GLCK   ++EA+      L  +++PD VTY  LI G CK+GR T A+ L 
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + M   G   D +  ++L D
Sbjct: 312 NEMHHRGQPADVVTYTSLLD 331



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L+ ++  R + P++ITYNT+IC +C   +L  A  L  ++    + P+
Sbjct: 160 LCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPD 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+ILIDA CKEG+  +A  +F  M++ G   NV +Y+ +I+G  K + +  A ++  
Sbjct: 220 VYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLR 277

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+ P+ V+Y+ LIDGLCK G +  AL   +         DVVTY  L+   CK  
Sbjct: 278 EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQ 337

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L+  M   GI P     + L D
Sbjct: 338 NLDKATALFMKMKERGIQPTMYTYTALID 366



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 108/193 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ L  ++  + + PD +TYN++I G C   R+  A+ L  ++       + +T+T
Sbjct: 268 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 327

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+DA CK   +D AT +F KM E+G +  + TY+ LIDG  K   +K+A ++++ +   
Sbjct: 328 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 387

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               ++ +Y+++I GLCK G+ +EAL       DN  +P+ VT+ I+IR   +     +A
Sbjct: 388 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 447

Query: 187 MQLYDSMLRNGIM 199
            +L   M+  G++
Sbjct: 448 EKLLHEMIAKGLL 460



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 5/199 (2%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     +  L G++   G  P+ IT+ T++ G C    + + +   +K+     + N 
Sbjct: 56  CHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQ 115

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  L++  CK G    A  +   + ++  + NVV YS +IDG  K + +  A+D+Y E
Sbjct: 116 VSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSE 175

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+++Y+ LI   C  G +  A    H  +  ++ PDV T++ILI   CK G+
Sbjct: 176 MDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK 235

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              A Q++ +M++ G+ P+
Sbjct: 236 --NAKQIFHAMVQMGVNPN 252



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +    + L  Q+  +G+E +++T + +I  +C L ++  +  L  K+  +   PN
Sbjct: 20  LVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPN 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T L+   C +G +        K++ +  + N V+Y  L++G  K+   + A  +  
Sbjct: 80  TITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLR 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKA 180
            + + +  PN+V YS +IDGLCK  L+ EA Y  +  +D   + P+V+TY  LI  +C A
Sbjct: 140 MIEDRSTRPNVVMYSAIIDGLCKDKLVNEA-YDLYSEMDAREIFPNVITYNTLICAFCLA 198

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+   A  L   M+   I PD    S L D
Sbjct: 199 GQLMGAFSLLHEMILKNINPDVYTFSILID 228



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           II +N I+     L      + L +++    ++ N +T +ILI+ FC  G+M  +  +  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           K+L+ G   N +T++ L+ G      +K     ++++       N VSY  L++GLCK G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
               A+       D    P+VV Y+ +I G CK     EA  LY  M    I P+ +  +
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 207 TL 208
           TL
Sbjct: 190 TL 191


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 113/210 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ PDI TYN++I   C+L        L  ++   ++ PN
Sbjct: 262 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG +  A  +   M+++G + +VVTY+ L+DG+     M  A  V++
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN+ SY+ILI+G C+   M++A+          L+ D VTY  LI G C  G
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           R   A+ L+  M+ +G +PD +    L DY
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDY 471



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ PD+ T N +I  +C L RL  A  +  KL  +  +P++ TF 
Sbjct: 127 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFN 186

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F K + +G + +VVTY  L++G  K  N  +A  +   M + 
Sbjct: 187 TLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 246

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+++Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C        
Sbjct: 247 NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 306

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M+ + IMP+ ++ ST+ D
Sbjct: 307 TTLLNEMVNSKIMPNVVVFSTVVD 330



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 106/197 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF +    G +PD++TY T++ G C +     A++L   +     +PN I 
Sbjct: 195 EGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA 254

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +ID+ CK+ ++ +A  +FS+M+ KG   ++ TY+ LI         K    +  EM 
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 314

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I PN+V +S ++D LCK G++  A       +   + PDVVTY  L+ G+C      
Sbjct: 315 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 374

Query: 185 EAMQLYDSMLRNGIMPD 201
           EA++++D+M+  G +P+
Sbjct: 375 EAVKVFDTMVHKGCVPN 391



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +  AA++L   +  +   P++I YNTII   C   ++ EA  LF ++    + P+
Sbjct: 227 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 286

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI A C        T + ++M+      NVV +S ++D   K   +  A DV +
Sbjct: 287 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 346

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P++V+Y+ L+DG C R  M+EA+  F   +    +P+V +Y ILI GYC+  
Sbjct: 347 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 406

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  +AM L + M   G++ D +  +TL  + L   G  +H I
Sbjct: 407 RMDKAMGLLEQMSLQGLIADTVTYNTLI-HGLCHVGRLQHAI 447



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 106/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  RG+EPD++TY  ++ G+C  + +DEAV++F+ +      PN
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +C+  RMD A  +  +M  +G  A+ VTY+ LI G      ++ A  ++ 
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++V+Y IL+D LCK   + EA+        ++L  D++ Y I I G C+AG
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511

Query: 182 RPTEAMQLYDSM 193
               A  L+ ++
Sbjct: 512 ELEAARDLFSNL 523



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 87/171 (50%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            N LD+A+  F ++  +   P+++ FT L+ +  K         + ++M   G   +V T
Sbjct: 90  FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 149

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
            + LI+ +   + +  AF V  ++ +    P+  +++ LI GLC  G + EAL+ F   +
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                PDVVTY  L+ G CK G  + A++L  SM++    P+ +  +T+ D
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 260


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 137 KDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 196

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE ++DDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 197 TYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQM 256

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDL 316

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++     D ++ + L
Sbjct: 317 DTAFEHRKRMIQENTRLDDVVYTAL 341



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 205 LCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 265 LITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRK 324

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N   + V Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 325 RMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 385 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 414



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 100 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPS 159

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   +  A ++++
Sbjct: 160 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFD 219

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 220 EMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 279

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 280 DLKQAHHLIDEMSMKGLKPDKITYTTLID 308



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 58  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 118 ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 177

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 178 EGFRLKSAMLASGVQPDVYTYSVL 201


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 112/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++++A +LF ++    L PN +TFT 
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A   + +ML +G   +++TY+ LI G  K  ++K A D+ +EM    
Sbjct: 247 LIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E ALY     +  ++  D V Y  LI G C+ G+  +A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAE 366

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 367 KMLREMLSVGLKPD 380



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F ++T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +M+DA  +F +M+  G   N VT++ LIDG+ K+ ++  A + Y+EM
Sbjct: 208 TYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+     M++  I  D +  + L
Sbjct: 328 ETALYYRKRMIKENIRLDDVAYTAL 352



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 108/199 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +LFG++   GL P+ +T+ T+I G+C    +D A++ ++++      P+
Sbjct: 216 LCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++A    +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVKTGSKLLKEMQRDGHVP 414



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ + G    +  +N ++  +C    +  A  +F+++T   L+P+ ++F  L++ + 
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYI 182

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G +D+   + S M   G + +V TYS LI+G  K   M  A +++ EM  N + PN V
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGV 242

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LIDG CK G ++ A+  +   L     PD++TY  LI G CK G   +A  L D M
Sbjct: 243 TFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 194 LRNGIMPDGLLLSTLAD 210
              G+ PD +  +TL D
Sbjct: 303 SMKGLKPDKITYTTLID 319



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A+   +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EG+  DA  M  +ML  G K +  TY+ +I+ + K  ++K+   + +
Sbjct: 346 DVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMQRDGHVPCVVT 418



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 37/204 (18%)

Query: 44  DEAVQLFEKLTCVQ--LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           D A  +FE +   +   + +   F+ LI A+ + G + DA   F    E        T  
Sbjct: 46  DSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCR 105

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA---------- 151
            +++ + K +  K  +  Y+E+ E     ++  ++IL+   CK G M  A          
Sbjct: 106 KVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKW 165

Query: 152 -----LYAFHCALDNHLL--------------------PDVVTYAILIRGYCKAGRPTEA 186
                + +F+  ++ ++                     PDV TY++LI G CK  +  +A
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDA 225

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L+  M+ NG++P+G+  +TL D
Sbjct: 226 NELFGEMIGNGLVPNGVTFTTLID 249


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I++  LD   +L   +   G++PD+ TY+ +I G C  +++DEA +LF ++    L PN 
Sbjct: 182 IRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK G++D A  ++ +ML +    +++TY+ LI G  K  ++K A ++  E
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       ++ ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 SVDAEKMLREMLSVGLKPD 380



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  +  +F  +   GL P ++++NT++ GY     LD+  +L   +    ++P+  
Sbjct: 148 KEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD+A  +F +ML+KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A    +      L PD +TY  LI G CK G  
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M+   I  D +  + L
Sbjct: 328 ETAFEYRKRMIEENIRLDDVAYTAL 352



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 115/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   ++D A+++++++    L P+
Sbjct: 216 LCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  + ++M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLLKEMQRDGHVP 414



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  +  +F+ +    L+P+
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + ++G +D    + S M   G + +V TYS LI+G  K   M  A +++ 
Sbjct: 171 VVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFX 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L + M   G+ PD +  +TL D
Sbjct: 291 DLKQARNLINEMSMKGLKPDKITYTTLID 319



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGHVPSVVT 418



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E   +    T   +++   K +  K  +  Y+E+ 
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGL---------------MEEALYAFHCALDNHLL----- 164
           E     ++  ++IL+   CK G                +  ++ +F+  ++ ++      
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD 188

Query: 165 ---------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  EA +L+  ML  G++P+G+  +TL 
Sbjct: 189 KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           velutina]
          Length = 406

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 112/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 168 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTT 227

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ ++M    
Sbjct: 228 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKG 287

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G++  A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 288 LKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAE 347

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 348 KMLREMLSVGLNPD 361



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 121/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P  ++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 129 KDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVY 188

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 189 TYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 248

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN----HLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D+     L PD +TY  LI G CK
Sbjct: 249 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDDMSRKGLKPDKITYTTLIDGCCK 304

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    +++  I  D ++ + L
Sbjct: 305 EGVLVSAFEHRKRLIQENIRLDDVVYTAL 333



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 92  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 151

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 152 AVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFD 211

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 212 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 271

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M R G+ PD +  +TL D
Sbjct: 272 DLKQAHDLIDDMSRKGLKPDKITYTTLID 300



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 197 LCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +   M  KG K + +TY+ LIDG  K   + SAF+  +
Sbjct: 257 LITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRK 316

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + + NI  + V Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 317 RLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKG 376

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 377 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 406



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC--LIDGYFKSQNMKSAFDVYE 121
            F+ LI A+ + G + DA   +   L +  K  V   +C  +++   K +  K  +  YE
Sbjct: 49  VFSGLITAYLESGFLRDAIECYX--LTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYE 106

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E     ++  ++IL+   CK G +  A   F       L P  V+Y  L+ GY + G
Sbjct: 107 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLG 166

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              E  +L  +ML +G+ PD    S L
Sbjct: 167 VLDEGFRLKSAMLASGVQPDVYTYSVL 193


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 120/205 (58%), Gaps = 8/205 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNSITFT 66
           AL+L  ++T+ G  PD IT+N ++ G C   +++    L  +L     C+   PN +T+T
Sbjct: 237 ALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCM---PNVVTYT 293

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  +CK GRM+DA  +++ MLE G + N VTY+ LI+GY K+ +M+SA  +Y ++   
Sbjct: 294 SVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILR 353

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V++S LIDG C+ G +++A+  +     +H+ P+V T++I+I   CK  R  EA
Sbjct: 354 RCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEA 413

Query: 187 MQLYDSM-LRNGIMPDGLLLSTLAD 210
           +     + +R  I P   + + + D
Sbjct: 414 LGFLRELNMRADIAPQTFIYNPVID 438



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 2/203 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           +LI       A+ LF      GL  PD  ++N +I G C +    +A++L E++T     
Sbjct: 191 LLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCS 250

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFD 118
           P++IT  IL+D  C+  +++    +  ++   G    NVVTY+ +I GY K+  M+ A  
Sbjct: 251 PDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALS 310

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           VY +M E+   PN V+Y++LI+G  K   ME A+  +   +     PDVVT++ LI GYC
Sbjct: 311 VYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYC 370

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           + G+  +AM+++  M ++ I P+
Sbjct: 371 RCGQLDDAMRIWKEMGQHHIQPN 393



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL ++  + + G  P+ +TYN +I GY     ++ AV+++ +L   +  P+ +
Sbjct: 301 KAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVV 360

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA  ++ +M +   + NV T+S +I    K      A     E+
Sbjct: 361 TFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLREL 420

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P    Y+ +ID LCK G +EEA        +    PD  TY ILI G+C  GR
Sbjct: 421 NMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGR 480

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA+ L+  M+  G  PD + +++ 
Sbjct: 481 IPEAITLFHKMVETGCRPDKITVNSF 506



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFT 66
           LDAA+ L  + +  G   +   YN ++    +  R  +AV LFE      L  P+  +F 
Sbjct: 163 LDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFN 222

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   C+ G    A  +  +M E G   + +T++ L+DG  +++ +    D+   +  +
Sbjct: 223 VVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRD 282

Query: 127 NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN+V+Y+ +I G CK G ME+AL  ++  L++   P+ VTY +LI GY KA     
Sbjct: 283 GVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMES 342

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++Y  ++     PD +  S+L D
Sbjct: 343 AVRMYRQLILRRCPPDVVTFSSLID 367



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 6/206 (2%)

Query: 7   HLDAALKLFGQLTDR-GLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLKPNSIT 64
           H DA LKLF Q+TD+ G  PD + + + + G C+    LD AV L  K +    +     
Sbjct: 127 HRDA-LKLFDQMTDQSGYLPDAVFF-SFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYA 184

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  L++     GR  DA  +F   ++ G    +  +++ +I G  +  N + A ++ E M
Sbjct: 185 YNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERM 244

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGR 182
            E   SP+ ++++IL+DGLC+   +            D   +P+VVTY  +I GYCKAGR
Sbjct: 245 TEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGR 304

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A+ +Y+ ML +G  P+ +  + L
Sbjct: 305 MEDALSVYNDMLESGTRPNTVTYNVL 330



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 103/187 (55%), Gaps = 1/187 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +++A++++ QL  R   PD++T++++I GYC   +LD+A+++++++    ++PN  
Sbjct: 336 KALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVY 395

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           TF+I+I + CK+ R  +A     ++  +   A     Y+ +ID   K   ++ A  +  +
Sbjct: 396 TFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTD 455

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E    P+  +Y+ILI G C +G + EA+  FH  ++    PD +T    I    KAG 
Sbjct: 456 MEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGM 515

Query: 183 PTEAMQL 189
           P E  Q+
Sbjct: 516 PNEVDQI 522



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 98/197 (49%), Gaps = 5/197 (2%)

Query: 10  AALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITFT 66
           +AL++F  L    L   P   +Y+ +I   C   R  +A++LF+++T      P+++ F+
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +  +    G +D A  + +K  + G +     Y+ L++        + A  ++E   ++
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211

Query: 127 NI-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            + SP+  S++++I G+C+ G  ++AL       +    PD +T+ IL+ G C+A +   
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271

Query: 186 AMQLYDSMLRNGI-MPD 201
              L   + R+G+ MP+
Sbjct: 272 GHDLLRRLQRDGVCMPN 288



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 4/170 (2%)

Query: 45  EAVQLFEKLTCVQLK--PNSITFTILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYS 101
            A+++F  L    L   P+  +++ +I   C+ GR  DA  +F +M ++ G   + V +S
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +      +  + +A  +  +  +        +Y+ L++ L  RG  ++A+  F   + +
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211

Query: 162 HLL-PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L  PD  ++ ++I+G C+ G   +A++L + M   G  PD +  + L D
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVD 261



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A  +   + ++G  PD  TY  +I G+C   R+ EA+ LF K+     +P
Sbjct: 439 ILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRP 498

Query: 61  NSITFTILIDAFCKEG 76
           + IT    I    K G
Sbjct: 499 DKITVNSFISCVLKAG 514


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFT 66
           +D A +LF ++   G  PD+ITYNT+I G+C +N +D    L ++L     L P+ +T+T
Sbjct: 253 VDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYT 312

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  +CK G+M+ A+++F+ M+  G K N  T++ LI+G+ K  +M SA ++YEEM   
Sbjct: 313 SIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLL 372

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+I++++ LIDG C+ G +E +L  +H     +L P+  T+AIL    CK  R  EA
Sbjct: 373 GCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEA 432



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 35/226 (15%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L+   L PD++TY +II GYC L ++++A  LF  +    +KPN+ TF ILI+ F K G 
Sbjct: 299 LSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGD 358

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           M  A  M+ +ML  G   +++T++ LIDG+ ++  ++ +  ++ E+   N+SPN  +++I
Sbjct: 359 MVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAI 418

Query: 138 L-----------------------------------IDGLCKRGLMEEALYAFHCALDNH 162
           L                                   IDG CK G ++EA        +  
Sbjct: 419 LTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKR 478

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             PD +TY ILI G+C  GR +EA+ +++ ML  G  PD + +++L
Sbjct: 479 CKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSL 524



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 109/190 (57%), Gaps = 1/190 (0%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+E  ++ YN ++      N++DEAV  F +   +    +S +F ILI   C+ G++D A
Sbjct: 197 GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKA 256

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CENNISPNIVSYSILID 140
             +F++M   G   +V+TY+ LI+G+ +   +    D+ +E+  +N++SP++V+Y+ +I 
Sbjct: 257 FELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIIS 316

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK G ME+A   F+  + + + P+  T+ ILI G+ K G    A  +Y+ ML  G  P
Sbjct: 317 GYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPP 376

Query: 201 DGLLLSTLAD 210
           D +  ++L D
Sbjct: 377 DIITFTSLID 386



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 98/180 (54%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A  ++ ++   G  PDIIT+ ++I G+C   +++ +++L+ +L    L PN  TF IL 
Sbjct: 361 SAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILT 420

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +A CKE R+ +A      +  +   A    Y+ +IDG+ K+ N+  A  +  EM E    
Sbjct: 421 NALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCK 480

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ ++Y+ILI G C +G + EA+  F+  L     PD +T   LI    KAG P EA ++
Sbjct: 481 PDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRI 540



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ +LKL+ +L  R L P+  T+  +    C  NRL EA      L    +      +  
Sbjct: 394 VERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNP 453

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID FCK G +D+A ++ ++M EK  K + +TY+ LI G+     +  A  ++  M    
Sbjct: 454 VIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTG 513

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA 151
            +P+ ++ + LI  L K G+  EA
Sbjct: 514 CAPDSITMTSLISCLLKAGMPNEA 537



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 26/212 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A      L  R +      YN +I G+C    +DEA  +  ++   + KP+
Sbjct: 423 LCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPD 482

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+TILI   C +GR+ +A  +F++ML  G   + +T + LI    K+     A+ + +
Sbjct: 483 KITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ 542

Query: 122 EMCEN------NISPNI---------VSYSILIDGLCKR--GLMEEALYAFHCALDNHLL 164
              E+      ++  N+         V++   +DGL     GL    L    C     L 
Sbjct: 543 IASEDFNLGLKSLKRNVPLRTNTDIPVAFMSTVDGLTNHFPGLASMPLAT--CNEGQSL- 599

Query: 165 PDVVTYAILIRGYC-KAGRPTEAMQLYDSMLR 195
                Y IL+  YC KA  P EA  +  ++ R
Sbjct: 600 -----YNILLDKYCIKAAHPWEASDMCFTVFR 626


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITY-----------------------------------NTIIC 35
           A K+F  +  RGL+PDI TY                                   N +IC
Sbjct: 131 ARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILIC 190

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
            Y    ++DE V +F K+    L PN++ +  +ID  CK GR+DDA + F +M++KG   
Sbjct: 191 AYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTP 250

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           NVV Y+ LI         + A ++  E+ +  I+PNIV ++ ++D LCK G + E+   F
Sbjct: 251 NVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLF 310

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                  + PDV+TY+ LI GYC AG+   AM+L   M+  G+ PD +  STL
Sbjct: 311 DLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D  + +F ++  +GL P+ + Y T+I G C L RLD+A+  FE++    L PN +
Sbjct: 194 KQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVV 253

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI A C   + + A  +  ++L++G   N+V ++ ++D   K   +  +  +++ +
Sbjct: 254 VYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLL 313

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P++++YS LIDG C  G M+ A+      +   L PD VTY+ LI GYCK  R 
Sbjct: 314 GHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRM 373

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  NG+ PD
Sbjct: 374 EDALALFKEMESNGVNPD 391



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 109/196 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+  F Q+ D+GL P+++ Y ++I   C+ ++ ++A +L  ++    + PN
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  ++D+ CKEGR+ ++  +F  +   G   +V+TYS LIDGY  +  M  A  +  
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLT 346

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+ V+YS LI+G CK   ME+AL  F     N + PD++TY I++ G  +  
Sbjct: 347 GMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTR 406

Query: 182 RPTEAMQLYDSMLRNG 197
           R   A +LY  +  +G
Sbjct: 407 RTAAAKELYARITESG 422



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 42/237 (17%)

Query: 16  GQLTDRGLE-------PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            Q  DR +E       P+  TYN+I+ GYCS  + ++A+ +F K+    ++P+ +T+  L
Sbjct: 59  AQAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG---------------------- 106
           +D  CK G+  +A  +F  M+++G K ++ TY  L+ G                      
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 107 -------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
                        Y K + +     V+ +M +  ++PN V+Y  +IDGLCK G +++A+ 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            F   +D  L P+VV Y  LI   C   +  +A +L   +L  GI P+ +  +T+ D
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILD 295



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 4/184 (2%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+++YNTII G      +D+A   + ++   ++ P+++T+  +I A  K   MD A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + M+      N  TY+ ++ GY  S   + A  ++ +MC + I P++V+Y+ L+D LCK
Sbjct: 69  LTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G   EA   F   +   L PD+ TY  L+ GY   G   E   L   M++NG+  D  +
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 205 LSTL 208
            + L
Sbjct: 185 FNIL 188



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 87/143 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  + KLF  L   G+ PD+ITY+T+I GYC   ++D A++L   +  V LKP+
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T++ LI+ +CK  RM+DA  +F +M   G   +++TY+ ++ G F+++   +A ++Y 
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA 416

Query: 122 EMCENNISPNIVSYSILIDGLCK 144
            + E+     + +Y+I++    K
Sbjct: 417 RITESGTQLELSTYNIILMDFAK 439



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 39/242 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A   + ++ DR + PD +TYN+II        +D A+++      V + PN
Sbjct: 21  LFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL----TVMVMPN 76

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  ++  +C  G+ + A  +F KM   G + +VVTY+ L+D   K+     A  +++
Sbjct: 77  CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFD 136

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLM--------------------------------- 148
            M +  + P+I +Y  L+ G   +G +                                 
Sbjct: 137 SMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQE 196

Query: 149 --EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             +E +  F       L P+ V Y  +I G CK GR  +AM  ++ M+  G+ P+ ++ +
Sbjct: 197 KVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYT 256

Query: 207 TL 208
           +L
Sbjct: 257 SL 258



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 4/116 (3%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +VV+Y+ +IDG FK  ++  A+  Y EM +  +SP+ V+Y+ +I  L K   M+ A+   
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME-- 67

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              L   ++P+  TY  ++ GYC +G+  +A+ ++  M  +GI PD +  ++L DY
Sbjct: 68  --VLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 67/110 (60%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL   +   GL+PD +TY+T+I GYC +NR+++A+ LF+++    + P+ IT+ I
Sbjct: 338 MDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNI 397

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           ++    +  R   A  +++++ E G +  + TY+ ++  + K+ ++   F
Sbjct: 398 ILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHF 447


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A +L  ++   G  P++  YN +I   C    LD+A  L+  ++ + L+PN
Sbjct: 340 LRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPN 399

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE------------------------------- 90
            IT++ILID+FC+ GR+D A   F +M++                               
Sbjct: 400 GITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFI 459

Query: 91  ----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
               KG +    T++ LI GY K   ++ AF +Y +M +N I+PN+ +++ LI GLC   
Sbjct: 460 EMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTN 519

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            M EA   F   ++  + P  VTY +LI GYC+ G+  +A +L + M + G++PD
Sbjct: 520 KMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 19/220 (8%)

Query: 6   CH---LDAALK---------LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL 53
           CH   +D ALK         L   + D+GL PD + Y ++I  Y       +A + ++ +
Sbjct: 647 CHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLM 706

Query: 54  TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
              +  PN +T+T L++  CK G MD A ++F +M       N +TY C +D   K  NM
Sbjct: 707 VTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNM 766

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           K A  ++  M +  ++ N V+++I+I G CK G   EA        +N + PD VTY+ L
Sbjct: 767 KEAIGLHHAMLKGLLA-NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTL 825

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           I  YC++G    +++L+D+ML  G+ PD      L  YNL
Sbjct: 826 IYEYCRSGNVGASVKLWDTMLNRGLEPD------LVAYNL 859



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE     A + +  +      P+++TY  ++ G C    +D A  LF+++    + PNSI
Sbjct: 692 KEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI 751

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   +D   KEG M +A  +   ML KG  AN VT++ +I G+ K      A  V  EM
Sbjct: 752 TYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEM 810

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN I P+ V+YS LI   C+ G +  ++  +   L+  L PD+V Y +LI G C  G  
Sbjct: 811 TENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGEL 870

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L D MLR GI+PD
Sbjct: 871 DKAFELRDDMLRRGIIPD 888



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   LD A+  F ++   G+   +  YN++I G C    L  A  LF ++T   ++P + 
Sbjct: 412 RSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTAT 471

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI  +CK+ ++  A  +++KM++ G   NV T++ LI G   +  M  A ++++E+
Sbjct: 472 TFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL 531

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P  V+Y++LI+G C+ G +++A           L+PD  TY  LI G C  GR 
Sbjct: 532 VERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRV 591

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A    D + +  +  + +  S L
Sbjct: 592 SKAKDFIDDLHKQNVKLNEMCYSAL 616



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A KL+ ++ D G+ P++ T+  +I G CS N++ EA +LF++L   ++KP  +
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEV 541

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI+ +C++G++D A  +   M +KG   +  TY  LI G   +  +  A D  +++
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + N+  N + YS L+ G C+ G + EAL A    +   +  D+V +A+LI G  K    
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                L   M   G+ PD ++ +++ D
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMID 688



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D A +L   +  +GL PD  TY  +I G CS  R+ +A    + L    +K N +
Sbjct: 552 RDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEM 611

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ L+  +C+EGR+ +A     +M+++G   ++V ++ LIDG  K  + K+ FD+ ++M
Sbjct: 612 CYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDM 671

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y+ +ID   K G  ++A   +   +     P+VVTY  L+ G CKAG  
Sbjct: 672 HDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEM 731

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A  L+  M    + P+ +      D NL   G+ +  I
Sbjct: 732 DRAGLLFKRMQAANVPPNSITYGCFLD-NLTKEGNMKEAI 770



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 105/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   L  +GL  D++TY T++ G+C L + +  +QL +++  +   P 
Sbjct: 270 LCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + L+D   K+G++DDA  +  K+   G   N+  Y+ LI+   K  ++  A  +Y 
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYS 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   N+ PN ++YSILID  C+ G ++ A+  F   + + +   V  Y  LI G CK G
Sbjct: 390 NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG 449

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + A  L+  M   G+ P     ++L
Sbjct: 450 DLSAAESLFIEMTNKGVEPTATTFTSL 476



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 95/177 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G +  I+TYN +I G C  +R+ EAV++   L    L  + +T+  L+  FC+  + +  
Sbjct: 255 GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAG 314

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  +M+E G        S L+DG  K   +  A+++  ++      PN+  Y+ LI+ 
Sbjct: 315 IQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINS 374

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           LCK G +++A   +      +L P+ +TY+ILI  +C++GR   A+  +D M+++GI
Sbjct: 375 LCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGI 431



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 1/165 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  LF ++    + P+ ITY   +        + EA+ L   +    L  N
Sbjct: 725 LCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLAN 783

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T  I+I  FCK GR  +AT + S+M E G   + VTYS LI  Y +S N+ ++  +++
Sbjct: 784 TVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWD 843

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
            M    + P++V+Y++LI G C  G +++A       L   ++PD
Sbjct: 844 TMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 92/210 (43%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++E H       F     R      + +N ++  Y   +R+ +AV + + +    L P
Sbjct: 129 LLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLP 188

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              T + L++   K  +      +F + +  G + +  T S ++    + ++   A +  
Sbjct: 189 EVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKI 248

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M  N    +IV+Y++LI GLCK   + EA+          L  DVVTY  L+ G+C+ 
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +    +QL D M+  G  P    +S L D
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVD 338



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 35/223 (15%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P++ T + ++ G   + +     +LF++     ++P+  T + ++ + C+      A 
Sbjct: 186 LLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAK 245

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV----------------------- 119
                M   G   ++VTY+ LI G  K   +  A +V                       
Sbjct: 246 EKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGF 305

Query: 120 ------------YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
                        +EM E   SP   + S L+DGL K+G +++A            +P++
Sbjct: 306 CRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNL 365

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             Y  LI   CK G   +A  LY +M    + P+G+  S L D
Sbjct: 366 FVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILID 408


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 119/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE ++DDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++     D ++ + L
Sbjct: 334 DTAFEHRKRMIQENTRLDDVVYTAL 358



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N   + V Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   +  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLKQAHHLIDEMSMKGLKPDKITYTTLID 325



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVL 218


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 107/187 (57%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ +TYN +I GYC  + ++ A +LF+++    + PN +T   L+D  CK GR++ A   
Sbjct: 414 PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEF 473

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F++M  KG K N VTY+ LI  +    N++ A ++++EM E   SP+ + Y  LI GL +
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G ++ A +      +    PD+V++ +LI G+C+  +  EA ++   M   GI PDG+ 
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593

Query: 205 LSTLADY 211
            +TL  +
Sbjct: 594 YNTLISH 600



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 112/197 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++AA +LF Q+   G+ P+++T NT++ G C   R++ AV+ F ++    LK N++
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI AFC    ++ A  +F +MLE G   + + Y  LI G  ++  +  A  V  +M
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   SP+IVS+++LI+G C++  ++EA        +  + PD VTY  LI  + K G  
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607

Query: 184 TEAMQLYDSMLRNGIMP 200
           + A +L   M++ G++P
Sbjct: 608 STAHRLMKKMVKEGLVP 624



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 106/196 (54%), Gaps = 1/196 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A++LF ++ + G  PD I Y T+I G     +LD A  +  K+      P+ ++F 
Sbjct: 501 NIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFN 560

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI+ FC++ ++D+A  M  +M   G K + VTY+ LI  + K+ +  +A  + ++M + 
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE 620

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            + P +V+Y  LI   C  G ++EA+  F   +  + + P+ V Y ILI   C+  +   
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680

Query: 186 AMQLYDSMLRNGIMPD 201
           A+ L D M   G+ P+
Sbjct: 681 ALSLMDDMKVKGVKPN 696



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 49/259 (18%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRL------DEAVQLFEK 52
           +L ++  +D AL L  ++     E  P+  T + +       +++      +E V L  K
Sbjct: 201 VLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSK 260

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDA------------------------------- 81
               ++ PNSI  T LI   C+ GR D A                               
Sbjct: 261 FAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRARE 320

Query: 82  ----TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM--CENN---ISPNI 132
                 + ++M E   + NVVT+  LI+   K + +  A +V+E+M   E+N   + P++
Sbjct: 321 FKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDV 380

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           ++Y+ LIDGLCK G  EE L            +P+ VTY  LI GYCKA     A +L+D
Sbjct: 381 ITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFD 440

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M ++G+ P+ + L+TL D
Sbjct: 441 QMNKDGVPPNVVTLNTLVD 459



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKPNS 62
           K      A +L  ++   GL P ++TY  +I  YC    LDEA+++F  ++   ++ PN+
Sbjct: 603 KTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNT 662

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + + ILI++ C++ ++D A  +   M  KG K N  T++ +  G  +   +  AF++ + 
Sbjct: 663 VIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDR 722

Query: 123 MCENNISPNIVSYSILIDGLCKRG 146
           M E+  +P+ ++  IL + L   G
Sbjct: 723 MTEHACNPDYITMEILTEWLSAVG 746



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  LD A ++  ++ + G++PD +TYNT+I  +        A +L +K+    L P  +
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627

Query: 64  TFTILIDAFCKEGRMDDATMMFSKM--LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           T+  LI A+C  G +D+A  +F  M    K P  N V Y+ LI+   +   +  A  + +
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP-PNTVIYNILINSLCRKNQVDLALSLMD 686

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN  +++ +  GL ++  + +A        ++   PD +T  IL       G
Sbjct: 687 DMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 53/204 (25%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKA----NVVTYSCLIDGYFKSQNMKSAFDVYE- 121
           ILID   ++GR+DDA  +  +ML+  PKA    N  T   +     K   +  A D  E 
Sbjct: 197 ILIDVLFRKGRVDDALHLLDEMLQ--PKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEI 254

Query: 122 -----EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----------NHLL-- 164
                +  E+ + PN +  + LI  LC+ G  + A    H  +           N LL  
Sbjct: 255 VGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTA 314

Query: 165 -----------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSM---LRNGI 198
                                  P+VVT+ ILI   CK  R  EA+++++ M     NG 
Sbjct: 315 LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374

Query: 199 M--PDGLLLSTLADYNLQSSGSQE 220
           +  PD +  +TL D  L   G QE
Sbjct: 375 LVEPDVITYNTLID-GLCKVGRQE 397


>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 395

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 114/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  LK+  ++ ++G +   +TYNTII G      LDEA+ L+ +L      P   
Sbjct: 116 KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC 175

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+D   K+G ++DA  +F +MLE G + N   Y+ L++GY  + + +   +++E M
Sbjct: 176 TYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 235

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++P+I SY+++ID LC  G + + L  F    D  L PD++TY +LI G  K+GR 
Sbjct: 236 VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 295

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA+ LY+ M + GI P+
Sbjct: 296 EEALSLYNDMEKKGIAPN 313



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+ +++ A  LF ++ + G EP+   YN ++ GY      ++  +LFE +    + P+
Sbjct: 184 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 243

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++T++ID  C +GR++D    F ++ + G + +++TY+ LI G  KS  ++ A  +Y 
Sbjct: 244 IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 303

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  I+PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 304 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 363

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
            P  A   Y  M+  G  P+
Sbjct: 364 SPENAFAAYGRMIVGGCRPN 383



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 103/192 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L  +  + G+     +YN +ICG    + +D A +LF ++  +   P+  T+ +++
Sbjct: 52  AAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLIL 111

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K  R++D   +  +M  KG K+  VTY+ +I G  KS+ +  A ++Y ++     S
Sbjct: 112 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 171

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   +Y  L+DGL K G +E+A   F   L+    P+   Y IL+ GY  AG   +  +L
Sbjct: 172 PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 231

Query: 190 YDSMLRNGIMPD 201
           ++SM+  G+ PD
Sbjct: 232 FESMVEQGMNPD 243



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 73/134 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +  L+  L  F QLTD GLEPD+ITYN +I G     RL+EA+ L+  +    + PN
Sbjct: 254 LCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 313

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI    K G+  +A  M+ ++L KG K NV TY+ LI GY  S + ++AF  Y 
Sbjct: 314 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYG 373

Query: 122 EMCENNISPNIVSY 135
            M      PN  +Y
Sbjct: 374 RMIVGGCRPNSSTY 387



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +LF  + ++G+ PDI +Y  +I   C+  RL++ +  F++LT + L+P+ IT+ +LI   
Sbjct: 230 ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 289

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K GR+++A  +++ M +KG   N+ TY+ LI    K+     A  +YEE+      PN+
Sbjct: 290 GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV 349

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
            +Y+ LI G    G  E A  A+   +     P+  TY
Sbjct: 350 FTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 387



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    + +++    +   GL  D +  + II   C       A +L +K   + +   
Sbjct: 9   ILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLK 68

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LI     E  +D A  +FS+M   G   +  TY  ++D   KS  ++    + E
Sbjct: 69  TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQE 128

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K  +++EA+  ++  +     P   TY  L+ G  K G
Sbjct: 129 EMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDG 188

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A  L+D ML  G  P+
Sbjct: 189 NIEDAEALFDEMLECGCEPN 208


>gi|297723907|ref|NP_001174317.1| Os05g0275100 [Oryza sativa Japonica Group]
 gi|255676205|dbj|BAH93045.1| Os05g0275100, partial [Oryza sativa Japonica Group]
          Length = 213

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 103/180 (57%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD  TY+++I G  +   +DEA  L + +    L PN IT+  LI   CK G++  A  +
Sbjct: 7   PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 66

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+K+  KG   N +TY+ LID Y K      AF + ++M E  I P +++YSILI GLC 
Sbjct: 67  FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 126

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +G MEEA+      ++N++ P+ +TY  LI GY K+G   E  +LYD M   G++P   +
Sbjct: 127 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 186



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 84/143 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  L   +   GL P+IITYN++I G C   +L  AV LF KL    + PN IT+  
Sbjct: 25  IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 84

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +CKEG+  +A  +  KM+E+G +  V+TYS LI G      M+ A  + ++M ENN
Sbjct: 85  LIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENN 144

Query: 128 ISPNIVSYSILIDGLCKRGLMEE 150
           + PN ++Y  LI G  K G MEE
Sbjct: 145 VDPNYITYCTLIHGYIKSGNMEE 167



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 86/161 (53%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P++ T++ LI      G +D+A  +   ML  G   N++TY+ LI G  KS  +  A ++
Sbjct: 7   PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 66

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + ++    ISPN ++Y+ LID  CK G   EA       ++  + P V+TY+ILI G C 
Sbjct: 67  FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 126

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            G   EA++L D M+ N + P+ +   TL    ++S   +E
Sbjct: 127 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE 167



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 71/122 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ LF +L  +G+ P+ ITYNT+I  YC   +  EA +L +K+    ++P 
Sbjct: 54  LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPT 113

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ILI   C +G M++A  +  +M+E     N +TY  LI GY KS NM+    +Y+
Sbjct: 114 VITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 173

Query: 122 EM 123
           EM
Sbjct: 174 EM 175



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 35/59 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L  + +++ A+KL  Q+ +  ++P+ ITY T+I GY     ++E  +L++++    L P
Sbjct: 124 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 182


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 120/205 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LD+  +L   +    ++P+  
Sbjct: 148 KEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +M++A  +F++ML+KG   N VT++ LIDG+ K+  + SA + Y++M
Sbjct: 208 TYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L ++M++  I  D +  + L
Sbjct: 328 DSAFELRETMVKESIRLDDVAYTAL 352



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 109/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   KL   +   G++PD+ TY+ +I G C  ++++EA  LF ++    L PN +TFT 
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G++D A   + +ML +    +++TY+ LI G  K  ++K A D+ +EM    
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +   +  D V Y  LI G C+ GR T+A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAE 366

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 367 KMLREMLSVGLKPD 380



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 110/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  LF ++ D+GL P+ +T+ T+I G+C   ++D A++ ++++      P+
Sbjct: 216 LCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ SAF++ E
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRE 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + +I  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK  
Sbjct: 336 TMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKE 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A +L   M R G +P
Sbjct: 396 DVKTAAKLLKEMQRQGHVP 414



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 109/211 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D    + + M   G + +V TYS LI+G  K   M  A D++ 
Sbjct: 171 VVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFN 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ A+  +   L    LPD++TY  LI G CK G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A  L D M   G+ PD +  +TL D N
Sbjct: 291 DLKQAQDLLDEMRMKGLKPDKITYTTLIDGN 321



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  ++  +GL+PD ITY T+I G C    LD A +L E +    ++ +
Sbjct: 286 LCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K +++K+A  + +
Sbjct: 346 DVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM      P +V+
Sbjct: 406 EMQRQGHVPCVVT 418



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI+A+ + G + DA   F    E   +    T   +++   K +  K  +  Y+E+ 
Sbjct: 69  FSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGL---------------MEEALYAFHCALDNHLL----- 164
           E     ++  ++IL+   CK G                +  ++ +F+  ++ ++      
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLD 188

Query: 165 ---------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  EA  L++ ML  G++P+G+  +TL 
Sbjct: 189 QGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++E  LD A  LF ++ D+G+ P+ ITYN ++ GYCS  +  EA+ +F K+    ++P+
Sbjct: 216 LLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   CK GR  +A  +F  M++KG K +   Y  L+ GY     +     + +
Sbjct: 276 VVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N   P+   ++ILI    K G+++EA+ AF       L P++VTY  ++   C+ G
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +AM  +D ++  G+ P+G++  TL
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTL 422



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 4/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +    ++ D+ITY T+I GYC   ++DEA +L E +    +KPN
Sbjct: 461 LCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPN 520

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I+ +CK GR++DA  +F +M  KG    +V YS ++ G F+++ + +A ++Y 
Sbjct: 521 EVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYL 580

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCK 179
            M +  I   I +Y+I++ GLC+    ++AL  FH  C +D HL     T+ I+I    K
Sbjct: 581 WMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHL--QNRTFNIMIDALLK 638

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            GR  EA  L+ S+L  G++P+
Sbjct: 639 GGRHDEAKDLFASLLARGLVPN 660



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 7/205 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK----PNSI 63
           +D AL+    L   G  P+  +YN ++ G C  NR  +A+ L   +     +    P+ +
Sbjct: 151 MDIALRRMPAL---GCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVV 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T +I+   +EG++D A  +F +ML++G   N +TY+CL+ GY  S   K A  ++ +M
Sbjct: 208 SYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           C + + P++V+Y+ L+  LCK G   EA   F   +     PD   Y  L+ GY   G  
Sbjct: 268 CRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  QL D M+RNG  PD  + + L
Sbjct: 328 VQMHQLLDVMVRNGTQPDHYIFNIL 352



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 5/207 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
           HLD A    G++   G     IT++ ++ G C   R  +A+ +   ++  +   PN+ ++
Sbjct: 111 HLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSY 170

Query: 66  TILIDAFCKEGRMDDATMMFSKML----EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IL+   C E R   A  +   M+      G   +VV+Y+ +I+G  +   +  A+ +++
Sbjct: 171 NILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +SPN ++Y+ L+ G C  G  +EA+  F     + + PDVVTY  L+   CK G
Sbjct: 231 EMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA +++DSM++ G  PD  +  TL
Sbjct: 291 RSMEARKVFDSMVKKGHKPDSSIYGTL 317



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 111/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+  F ++  +GL P+I+TY T++   C + ++D+A+  F++L    L PN +
Sbjct: 358 KHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGV 417

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  LI   C   + D A  +  +M+ +G   N + ++ L++   K   +  A ++++ M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++  ++++Y+ LIDG C  G ++EA       + + + P+ VTY  +I GYCK GR 
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L+  M   G+ P  ++ ST+
Sbjct: 538 EDACSLFRQMASKGVNPGIVIYSTI 562



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 105/204 (51%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E +L    +L   +   G +PD   +N +I  Y     +DEA+  F K+    L PN +T
Sbjct: 324 EGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT 383

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  ++DA C+ G++DDA   F +++ +G   N V +  LI G         A ++  EM 
Sbjct: 384 YGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMI 443

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I PN + ++ L++ LCK G++  A   F   +   +  DV+TY  LI GYC  G+  
Sbjct: 444 GRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD 503

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA +L + M+ +G+ P+ +  +T+
Sbjct: 504 EATKLLEGMVLDGVKPNEVTYNTI 527



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 107/196 (54%), Gaps = 1/196 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F +L   GL P+ + + T+I G C+ ++ D+A +L  ++    + PN+I F  
Sbjct: 397 VDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNT 456

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CKEG +  A  +F  M+    + +V+TY+ LIDGY     +  A  + E M  + 
Sbjct: 457 LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG 516

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V+Y+ +I+G CK G +E+A   F       + P +V Y+ ++ G  +  R   A 
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576

Query: 188 QLYDSMLRNGI-MPDG 202
           +LY  M++ GI +P G
Sbjct: 577 ELYLWMIKCGIKLPIG 592



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 104/201 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F ++   G+EPD++TYNT++   C   R  EA ++F+ +     KP+S  +  L+ 
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  EG +     +   M+  G + +   ++ LI  Y K   +  A   + +M +  + P
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHP 379

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y  ++D LC+ G +++A+  F   +   L P+ V +  LI G C   +  +A +L 
Sbjct: 380 NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELA 439

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M+  GI P+ +  +TL ++
Sbjct: 440 VEMIGRGICPNTIFFNTLLNH 460



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 11/216 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AL LF ++       D+ TY +I+ G CS    LD A     ++        +ITF+ L+
Sbjct: 84  ALSLFNRMP----RADLCTY-SIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLL 138

Query: 70  DAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
              C + R  DA  +   +M   G   N  +Y+ L+ G       + A  +   M  ++ 
Sbjct: 139 KGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDT 198

Query: 129 S----PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                P++VSY+ +I+GL + G +++A   F   LD  + P+ +TY  L+ GYC +G+P 
Sbjct: 199 RGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPK 258

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           EA+ ++  M R+G+ PD +  +TL  Y  ++  S E
Sbjct: 259 EAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSME 294



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   + AA +L+  +   G++  I TYN I+ G C  N  D+A+++F  L  +     
Sbjct: 566 LFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQ 625

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF I+IDA  K GR D+A  +F+ +L +G   NVVTY  ++    +   ++   D++ 
Sbjct: 626 NRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFL 685

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            + +N  + +    + L+  L ++G + +A
Sbjct: 686 SLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L          T+N +I       R DEA  LF  L    L PN +T+ ++
Sbjct: 608 DDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 667

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + +  ++G +++   +F  + + G  A+    + L+    +   ++ A     ++ ENN 
Sbjct: 668 MKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNF 727

Query: 129 S 129
           S
Sbjct: 728 S 728


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 150 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 209

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y+ M
Sbjct: 210 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRM 269

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 270 LSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 329

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 330 DTAFEHRKRMIQENIXLDDVAYTAL 354



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN +TFT 
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ P+
Sbjct: 369 KMLREMLSVGLKPN 382



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 218 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPD 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 278 LITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P+  TY ++I  +CK G
Sbjct: 338 RMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKG 397

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 398 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 427



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 103/189 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ +++  L++ + + G +D+ 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 192

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S ML  G + +V TYS LI+G  K   M  A ++++EM    + PN V+++ LIDG
Sbjct: 193 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 252

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   LLPD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 253 HCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 312

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 313 KITYTTLID 321



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 94/187 (50%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
             DI  ++ +I  Y     L +A++ +      +      T   +++   K         
Sbjct: 65  RSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 124

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
            +  +LE G  A++  ++ L+  + K  +++ A  V++ + +  + P++VSY+ L++G  
Sbjct: 125 FYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G ++E        L + + PDV TY++LI G CK  +  +A +L+D ML  G++P+G+
Sbjct: 185 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 244

Query: 204 LLSTLAD 210
             +TL D
Sbjct: 245 TFTTLID 251


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+  +D AL++F +L +  L PD   YN ++ G    NR+DEA +L + +    + P+
Sbjct: 678 LVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPD 737

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L+D   K GR+++A  MF+KM E+G + +VV Y+ L+D   K   +  A  ++ 
Sbjct: 738 LFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P++V+YS LID L K G +EEA Y F  ++     P+V  Y+ LI  + K G
Sbjct: 798 AMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKG 857

Query: 182 RPTEAMQLYDSMLRNGIMPDGL----LLSTLA 209
               A++L++ M R    P+ +    LLS LA
Sbjct: 858 MVDRALELFEEMQRRQCPPNIVTYNNLLSGLA 889



 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 116/210 (55%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+K     +A+ +FG+L    ++PD  T+   +  +    RLD A +  +++    + P
Sbjct: 261 LLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDP 320

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              TFT+LIDA  K G +D+A   F+ M       NVVTY+ L++G  K+  ++ A +V+
Sbjct: 321 GVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVF 380

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM ENN SP+ ++Y+ LIDGL K G  + A   F    D  L+P++ TY I+I    KA
Sbjct: 381 VEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKA 440

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  EA QL+  +   G +PD    +TL D
Sbjct: 441 GRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D AL +FG++ + G+EP +  Y T++       ++D A+Q+F +L    L P+
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  + I+++   K  R+D+A  +   M  +    ++ TY+ L+DG  KS  ++ AF+++ 
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    P++V+Y+ L+D L K G +  AL  F        +PDVVTY+ LI    K G
Sbjct: 763 KMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA   +++ +  G  P+  + S+L D
Sbjct: 823 RVEEAYYFFENSISKGCTPNVGVYSSLID 851



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D A KL   + ++ + PD+ TY +++ G     RL+EA  +F K+T    +P+
Sbjct: 713 LVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPD 772

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T L+D   K G++  A ++F  M +K    +VVTYS LID   K   ++ A+  +E
Sbjct: 773 VVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFE 832

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                  +PN+  YS LID   K+G+++ AL  F         P++VTY  L+ G  KAG
Sbjct: 833 NSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAG 892

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R   A +L + M + G +PD +  + L D
Sbjct: 893 RLNVAEKLLEEMEKVGCVPDLVTYNILID 921



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I   H+D A+KL   +      P ++TY T++ G     RLDEAV L  ++     +P+
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+ +F K  + +++  +F +M+ KG  A+V TYS +I+   KS ++  A DV+ 
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P + +Y  L+  L K   ++ AL  F+   ++ L+PD   Y I++ G  K+ 
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           R  EA +L DSM    I+PD    ++L D  L  SG  E  
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLD-GLGKSGRLEEA 757



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   L  AL +F  +  +   PD++TY+++I       R++EA   FE        P
Sbjct: 782 VLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTP 841

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   ++ LID+F K+G +D A  +F +M  +    N+VTY+ L+ G  K+  +  A  + 
Sbjct: 842 NVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +    P++V+Y+ILIDG+ K G+++EA   F    +  ++PDV+T+  LI    K 
Sbjct: 902 EEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKV 961

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA +L+DSM   G  P  +  + L D
Sbjct: 962 DKLLEACELFDSMEEEGYNPSVVTYNVLID 991



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 99/172 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K+  +D AL+LF ++  R   P+I+TYN ++ G     RL+ A +L E++  V   P+ +
Sbjct: 855  KKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ ILID   K G +D+A   F +M EKG   +V+T++ LI+   K   +  A ++++ M
Sbjct: 915  TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM 974

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
             E   +P++V+Y++LID L + G + EA   FH       +PD +T  I+ R
Sbjct: 975  EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 118/222 (53%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L  ++  +G EP ++TY++++  +   ++ +E++ LF+++       +
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVAD 632

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++++I+  CK   +D A  +F +M E+G +  +  Y  L+    K + +  A  ++ 
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E+++ P+   Y+I+++GL K   ++EA        + ++LPD+ TY  L+ G  K+G
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  EA  ++  M   G  PD +  ++L D  L   G   H +
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDV-LGKGGKLSHAL 793



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 107/207 (51%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L KE  ++ A   F     +G  P++  Y+++I  +     +D A++LFE++   Q  PN
Sbjct: 818  LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T+  L+    K GR++ A  +  +M + G   ++VTY+ LIDG  K   +  A   ++
Sbjct: 878  IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M E  I P++++++ LI+ L K   + EA   F    +    P VVTY +LI    +AG
Sbjct: 938  RMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAG 997

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  EA  ++  M   G MPDG+ +  +
Sbjct: 998  KVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 98/194 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   LD A +   ++   G++P + T+  +I        +DEA + F  +  ++  PN +
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T L++   K GR+++A  +F +M E     + + Y+ LIDG  K+     A  +++EM
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN+ +Y+I+I  L K G   EA   FH   +   +PDV TY  LI    K G+ 
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478

Query: 184 TEAMQLYDSMLRNG 197
            + + +   M+  G
Sbjct: 479 DKVLAIIKEMVEKG 492



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 107/202 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + +L LF ++  +G   D+ TY+ +I   C  + +D+A+ +F ++    ++P    +  L
Sbjct: 615 EESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTL 674

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + +  K+ ++D A  +F+++ E     +   Y+ +++G  KS  +  A  + + M   NI
Sbjct: 675 LSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI 734

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ +Y+ L+DGL K G +EEA   F    +    PDVV Y  L+    K G+ + A+ 
Sbjct: 735 LPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALI 794

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           ++ +M +   +PD +  S+L D
Sbjct: 795 IFRAMAKKRCVPDVVTYSSLID 816



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 31/238 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A ++F ++ +    PD I YNT+I G       D A  LF+++    L PN
Sbjct: 367 LAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPN 426

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I    K GR  +A  +F  + E+G   +V TY+ LID   K   M     + +
Sbjct: 427 LRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK 486

Query: 122 EMCENN----IS--------------------PNI-------VSYSILIDGLCKRGLMEE 150
           EM E      IS                    P++       ++Y+ L+      G ++E
Sbjct: 487 EMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDE 546

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+        +  +P VVTY  L+ G  KAGR  EA+ L   M + G  P  +  S+L
Sbjct: 547 AVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 101/202 (50%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA +++   +   G    +    +++  + S N +  A+++F ++      P++  +  +
Sbjct: 199 DAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFV 258

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++   K G    A ++F K+ +   + +  T+   +  + +S  +  A +  +EM ++ I
Sbjct: 259 LELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGI 318

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P + ++++LID L K G ++EA   F+   +    P+VVTY  L+ G  KAGR  EA +
Sbjct: 319 DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACE 378

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           ++  M  N   PD +  +TL D
Sbjct: 379 VFVEMKENNCSPDAIAYNTLID 400



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 82/151 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  ++D A K F  + +    P+++TY T++ G     RL+EA ++F ++      P+
Sbjct: 332 LVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPD 391

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I +  LID   K G  D A  +F +M ++G   N+ TY+ +I    K+     A+ ++ 
Sbjct: 392 AIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFH 451

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           ++ E    P++ +Y+ LID L K G M++ L
Sbjct: 452 DLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL 482



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 72/159 (45%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T++I         D    + + M ++G + ++   + L+  +  + N+  A +++ +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                +P+   Y+ +++ L K G    A+  F       + PD  T+ I +  + ++GR 
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             A +    M+++GI P     + L D  ++S    E C
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 7/222 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ HL      +    D G    + TY  +I         D  VQ+   LT +  + + I
Sbjct: 160 KDLHLAKCFFTWAGQQD-GYSHTVGTYTLMIKRLAGAQETDAVVQI---LTAMWKEGHRI 215

Query: 64  T---FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +    T L+  F     +  A  +F++M   G   +   Y+ +++   K     SA  V+
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVF 275

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            ++ +  I P+  ++ I +    + G ++ A       + + + P V T+ +LI    K+
Sbjct: 276 GKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G   EA + ++ M      P+ +  +TL +   ++   +E C
Sbjct: 336 GNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEAC 377


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A K+F  +   G+ P++ TY+ +I GYC    L +A  L++++   +L PN
Sbjct: 278 LCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPN 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  L+D FCK   +  A  +F  M++ G   N+  Y+CLI G  KS NM  A  +  
Sbjct: 338 VVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLS 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+SP++ +Y+ILI+GLC    + EA   F    +  + P  VTY  LI G+CK  
Sbjct: 398 EMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEY 457

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+ L   M  +G+ P+ +  STL D
Sbjct: 458 NIEKALDLCSEMTSSGVEPNIITFSTLID 486



 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L AA  LF  +   G++P++  YN +I G C    + EA+ L  ++  + L P+  
Sbjct: 350 KARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVF 409

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+  C E R+ +A  +F +M  +    + VTY+ LI G+ K  N++ A D+  EM
Sbjct: 410 TYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEM 469

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PNI+++S LIDG CK   ++ A+  +       ++PDVVTY  LI  + K    
Sbjct: 470 TSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANM 529

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA++LY  ML  GI P+    + L D
Sbjct: 530 KEALRLYSDMLEAGIHPNDHTFACLVD 556



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 122/214 (57%), Gaps = 8/214 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +++ AL L  ++T  G+EP+IIT++T+I GYC +  +  A+ L+ ++T   + P+ +
Sbjct: 455 KEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVV 514

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LIDA  KE  M +A  ++S MLE G   N  T++CL+DG++K   +  A D Y E 
Sbjct: 515 TYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLEN 574

Query: 124 CENNISPNIVS--------YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
            +     +IV         ++ LI+GLC+ G +  A   F       + PD+ +Y  +++
Sbjct: 575 NQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLK 634

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            + +  R T+ M L+  M++ GI+P+ ++   LA
Sbjct: 635 AHLREKRITDTMMLHCDMIKTGILPNLMVNQLLA 668



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 112/187 (59%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++  A+ L  ++    L PD+ TY  +I G C+  RL EA +LF+++   ++ P+S+
Sbjct: 385 KSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSV 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FCKE  ++ A  + S+M   G + N++T+S LIDGY K +N+K+A  +Y EM
Sbjct: 445 TYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEM 504

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y+ LID   K   M+EAL  +   L+  + P+  T+A L+ G+ K GR 
Sbjct: 505 TIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 564

Query: 184 TEAMQLY 190
           ++A+  Y
Sbjct: 565 SDAIDFY 571



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 5/209 (2%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++T  G++P++  Y   I   C  N+++EA ++FE +    + PN  T++ +ID +
Sbjct: 254 KLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGY 313

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK G +  A  ++ ++L      NVV +  L+DG+ K++ + +A  ++  M +  + PN+
Sbjct: 314 CKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNL 373

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
             Y+ LI G CK G M EA+         +L PDV TY ILI G C   R  EA +L+  
Sbjct: 374 YVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQR 433

Query: 193 MLRNGIMPDGLLLSTL-----ADYNLQSS 216
           M    I P  +  ++L      +YN++ +
Sbjct: 434 MKNERIFPSSVTYNSLIHGFCKEYNIEKA 462



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L  A +LF ++ +  + P  +TYN++I G+C    +++A+ L  ++T   ++PN
Sbjct: 418 LCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPN 477

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF+ LID +CK   +  A  ++ +M  KG   +VVTY+ LID +FK  NMK A  +Y 
Sbjct: 478 IITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYS 537

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF----HCALDNHLLP----DVVTYAIL 173
           +M E  I PN  +++ L+DG  K G + +A+  +      A    ++       V +  L
Sbjct: 538 DMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCL 597

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           I G C+ G    A + +  M   G+ PD
Sbjct: 598 IEGLCQNGYILRASRFFSDMKSGGVTPD 625



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)

Query: 13  KLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           +LF  L D +  +  I  ++ +I  +  +   ++A+ +  ++ C    P+S     +++ 
Sbjct: 151 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRC---SPDSKACLAILNG 207

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             +  R D   + +  M+ +G   +V  YS L    FK         + +EM    + PN
Sbjct: 208 LVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPN 267

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +  Y+I I  LC+   MEEA   F     + ++P++ TY+ +I GYCK G   +A  LY 
Sbjct: 268 VYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYK 327

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            +L   ++P+ ++  TL D
Sbjct: 328 EILVAELLPNVVVFGTLVD 346



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD      I+ G     R D     ++ +    L P+   +++L     K+G       +
Sbjct: 196 PDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKL 255

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M   G K NV  Y+  I    +   M+ A  ++E M  + + PN+ +YS +IDG CK
Sbjct: 256 LDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCK 315

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G + +A   +   L   LLP+VV +  L+ G+CKA     A  L+  M++ G+ P+
Sbjct: 316 TGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPN 372


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 112/202 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +F Q+ D+G++PD  TYN +I GY S+ +  E V++ E+++   LKP+  T+  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C  GR  +A  +F  M+ KG K NV  Y  LI GY     +    D+   M EN 
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP+   ++I+     K+ +++EA++ F+      L PDVV Y  LI   CK GR  +A+
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAV 433

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
             ++ M+  G+ P+  + ++L 
Sbjct: 434 LKFNQMMNEGVAPNIFVFNSLV 455



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 105/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G  P +I+Y T+I G+C + R+DEA +  + +  V LKP+  T+  L+ 
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ GR+DDA  +F +ML  G    VVTYS ++ G F ++    A ++Y  M  +    
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI  Y+I+++GL K   ++EA   F          ++ T+ I+I    K+GR  +AM L+
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681

Query: 191 DSMLRNGIMPD 201
            ++   G++PD
Sbjct: 682 ATISSYGLVPD 692



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 5   ECHLDAALKLFGQLTD---RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           E   + AL+L   + D   R   P++++Y  +I G+ +  ++D+A  LF ++    ++PN
Sbjct: 178 EKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPN 237

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID  CK   +D A  +F +M++KG K +  TY+CLI GY      K    + E
Sbjct: 238 VVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLE 297

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + P+  +Y  L++ LC  G   EA + F   +   + P+V  Y ILI GY   G
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKG 357

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             +E   L + M+ NG+ PD
Sbjct: 358 ALSEMHDLLNLMVENGLSPD 377



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL PD++ Y  +I   C L R+D+AV  F ++    + PN  
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  L+   C   + + A   + +ML +G + +VV ++ ++        +  A  + + M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P ++SY+ LI G C  G ++EA  +    L   L PD  TY  L+ GYC+AGR 
Sbjct: 510 ERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  ++  MLRNGI P  +  ST+
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTI 594



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
            L+     FG +   G   + I  N ++ G C   RL EA+  L +++  +   P+ +++
Sbjct: 109 RLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSY 168

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKA---NVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             L+  FC E R ++A  +   M +   ++   NVV+Y+ +I+G+F    +  A++++ E
Sbjct: 169 NTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLE 228

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I PN+V+Y+ +IDGLCK  +++ A   F   +D  + PD  TY  LI GY   G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             E +++ + M  +G+ PD     +L +Y
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 105/203 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A K    +   GL+PD  TYNT++ GYC   R+D+A  +F ++    + P  +T++
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++       R  +A  ++  M+  G + N+  Y+ +++G  K+  +  AF +++ +C  
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +    I +++I+I  L K G  E+A++ F       L+PDV TY ++     + G   E 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
             L+ +M ++G  P+  +L+ L 
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALV 735



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 103/189 (54%), Gaps = 1/189 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK F Q+ + G+ P+I  +N+++ G C++++ ++A + + ++    ++P+ + F  +
Sbjct: 431 DAVLK-FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C +G++  A  +   M   G +  V++Y+ LI G+     +  A    + M    +
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+  +Y+ L+ G C+ G +++A   F   L N + P VVTY+ ++ G     R +EA +
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 189 LYDSMLRNG 197
           LY +M+ +G
Sbjct: 610 LYLNMITSG 618



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYC-------SLNRLDEAVQLFEKLT---CVQ 57
           LD ALKLF  L        +I +N ++           S    +  V LF ++     ++
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+  T++ILI  FC+ GR++     F  +L+ G + N +  + L+ G   ++ +  A 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL---PDVVTYAIL 173
           D+  + M E   +P++VSY+ L+ G C     EEAL   H   D+      P+VV+YAI+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I G+   G+  +A  L+  M+  GI P+ +  +T+ D
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  +  +G++P++  Y  +I GY +   L E   L   +    L P+   F I+  A+ 
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K+  +D+A  +F+KM ++G   +VV Y  LID   K   +  A   + +M    ++PNI 
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ L+ GLC     E+A   +   L+  + PDVV +  ++   C  G+  +A +L D M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 194 LRNGIMPDGLLLSTL 208
            R G  P  +  +TL
Sbjct: 510 ERVGTRPGVISYTTL 524



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L+  +   G + +I  YN I+ G    N +DEA +LF+ L     +    TF I+I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K GR +DA  +F+ +   G   +V TY  + +   +   ++   D++  M ++  +P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           N    + L+  L  RG +  A  A+ C LD
Sbjct: 727 NSRMLNALVRRLLHRGDITRA-GAYLCKLD 755



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KLF  L  +  + +I T+N +I       R ++A+ LF  ++   L P+  T+ +
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   +FS M + G   N    + L+       ++  A     ++ E N
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKN 758

Query: 128 ISPNIVSYSILIDGLCK 144
            S    + ++LI  L +
Sbjct: 759 FSLEASTTAMLISLLSR 775


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 121/208 (58%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ LF QL + GL PD+ +Y  +I G C+  R+ EA+ L   +    L P+
Sbjct: 405 LCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPH 464

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  C+ GR+ +A  + ++M  KGP  + +TYS L+D  +K Q++  A  ++ 
Sbjct: 465 IVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFN 524

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + P+++ Y+I+IDG CK   ++EA+  F      +L+PD+VTY IL     K+G
Sbjct: 525 QMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
             +   + + +++R+ I P   +L  LA
Sbjct: 585 SNSYEWK-FVNVIRD-INPPPRVLKYLA 610



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 120/209 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F ++ +RG EP+I+T   ++ GYC    +D A +LF+ +     K +
Sbjct: 265 LCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ + I  +CK GR+ DA  +F +M  +G   N+VTY+ LID   K+  +  A+++ +
Sbjct: 325 VWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVK 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + ++P+IV+  IL+DGLCK   +++A+  F+  +++ L PDV +Y ILI G C + 
Sbjct: 385 TMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSR 444

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EAM L   M    ++P  +  S L D
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLID 473



 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 116/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A +LF  + + G + D+ TYN  I GYC + R+ +AV++F+++    + PN +T+ 
Sbjct: 305 NVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYN 364

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK G +  A  +   M   G   ++VT   L+DG  KS+ +  A  ++ ++ E+
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P++ SY+ILI G C    M EA+         +L+P +VTY+ LI G C++GR + A
Sbjct: 425 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 484

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L + M   G +PD +  S L D
Sbjct: 485 WRLLNEMHVKGPLPDTITYSILLD 508



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 119/218 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++   +   GL PDI+T   ++ G C   RLD+A+ LF +L    L P+
Sbjct: 370 LCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 429

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++TILI   C   RM +A  +   M  K    ++VTYSCLIDG  +S  + +A+ +  
Sbjct: 430 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLN 489

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ ++YSIL+D L K+  ++EA++ F+  +   L PDV+ Y I+I GYCK+ 
Sbjct: 490 EMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           R  EA+ L+  M    ++PD +  + L +   +S  + 
Sbjct: 550 RIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D   + + ++   G+ P+  TY ++I G C + +  E   L +++    L  +
Sbjct: 195 LCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVS 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV----------------------- 98
              FT+LID  CK G + +A  MF +M+ +G + N+V                       
Sbjct: 255 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFD 314

Query: 99  ------------TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                       TY+  I GY K   ++ A  V++EMC   + PNIV+Y+ LID LCK G
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +  A         + L PD+VT  IL+ G CK+ R  +A+ L++ ++ +G+ PD
Sbjct: 375 EVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 429



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 43/243 (17%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--------LKPNS 62
           AL+   ++ + G   + ++Y  +I G C   R++EAV L   +   +        +K N 
Sbjct: 126 ALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNV 185

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + ++I+ID  C+ G +D+    +++M+  G   N  TY  LI G          F + +E
Sbjct: 186 VMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDE 245

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP----------------- 165
           M    +  ++  +++LIDGLCK G++ EA   F   ++    P                 
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305

Query: 166 ------------------DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                             DV TY + I GYCK GR  +A++++D M R G++P+ +  ++
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365

Query: 208 LAD 210
           L D
Sbjct: 366 LID 368



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 27/204 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  +  +FG++  RG   D +  NT++ G C    + +A++  +++       N +++ 
Sbjct: 87  HVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYG 146

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+  C+ GR+++A  +   +                DG+F                  
Sbjct: 147 ILINGLCENGRVNEAVNLLRMI--------EKEKEKEKDGFF------------------ 180

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N+V YSI+ID LC+ G ++E    ++  + N + P+  TY  LIRG C  G+  E 
Sbjct: 181 -VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEG 239

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L D M+R G+     + + L D
Sbjct: 240 FGLVDEMIRRGLDVSVYVFTVLID 263



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A +L  ++  +G  PD ITY+ ++        LDEAV LF ++    L+P+
Sbjct: 475 LCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPD 534

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TI+ID +CK  R+D+A  +F +M  K    ++VTY+ L +  FKS +    +    
Sbjct: 535 VMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVN 594

Query: 122 EMCENNISPNIVSYSILIDGLCK 144
            + + N  P ++ Y   +  LCK
Sbjct: 595 VIRDINPPPRVLKY---LAALCK 614


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 118/206 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE ++D+A  +F++ML++G   N VT++ LID + K+  + SA ++Y++M
Sbjct: 208 TYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP++++Y+ LI GLCK+G +++          N L PD +TY  LI G CK G  
Sbjct: 268 LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             A +    M++  I  D +  + L 
Sbjct: 328 ETAFEFRKRMIKESIRLDNVAYTALV 353



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 110/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++DEA +LF ++    L PN +TFT 
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A  ++ +ML +G   +++TY+ LI G  K  ++K    + +EM  N 
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E A       +   +  D V Y  L+ G C+ GR  +A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAE 366

Query: 188 QLYDSMLRNGIMPD 201
           +++  ML  G+ PD
Sbjct: 367 KMFREMLSVGLKPD 380



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ DRGL P+ +T+ T+I  +C    +D A+++++++      P+
Sbjct: 216 LCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +     +  +M   G K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + +I  + V+Y+ L+ GLC+ G  ++A   F   L   L PD  TY ++I  +CK G
Sbjct: 336 RMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A +L   M R+G +P
Sbjct: 396 DVRTASRLLKEMQRDGHVP 414



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + S M   G + +V TYS LI+G  K   +  A +++ 
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFN 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LID  CK G+++ A+  +   L     PD++TY  LI G CK G
Sbjct: 231 EMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +   L D M  NG+ PD +  +TL D
Sbjct: 291 DLKQVRALIDEMSMNGLKPDKITYTTLID 319



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 75/133 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L     L  +++  GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +T L+   C+EGR DDA  MF +ML  G K +  TY+ +I+ + K  ++++A  + +
Sbjct: 346 NVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMQRDGHVPCVVT 418



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 2/204 (0%)

Query: 9   DAALKLFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D+A  +F  +  T      DI  ++ ++  Y     + +A+Q F      +      T  
Sbjct: 46  DSASAVFAAILGTKGTQRSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCR 105

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++   K          + ++LE G  A++  ++ ++  + K   M+ A  V++ + + 
Sbjct: 106 KVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKW 165

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++VS++ L++G  + G ++E          + + PDV TY++LI G CK  +  EA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEA 225

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L++ ML  G++P+G+  +TL D
Sbjct: 226 NELFNEMLDRGLVPNGVTFTTLID 249


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  +  LDE  +L   +    + P+  
Sbjct: 148 KEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y +M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD +TY  LI G CK
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKITYTTLIDGXCK 323

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 324 EGDLETAFEYRKRMIKENIRXDDVAYTAL 352



 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G+ PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNX 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ B GL P+ +T+ T+I G+C   R+D A++++ ++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I   CK G
Sbjct: 336 RMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                 +L   M R G +P+
Sbjct: 396 DVWTGSKLLKEMQRXGYVPN 415



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 103/189 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S M   G   +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   LLPD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+   K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM      PN+V+
Sbjct: 406 EMQRXGYVPNVVT 418



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 35/187 (18%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           + +   F+ LI A+ + G + DA   +    E   +    T   +I+   K +  K  + 
Sbjct: 63  RSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHL 163
            YEE  E     ++  ++IL+   CK G +  A               + +F+  ++ ++
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182

Query: 164 L--------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
                                PDV TY++LI G CK  +  +A +L+D ML NG++P+ +
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242

Query: 204 LLSTLAD 210
             +TL D
Sbjct: 243 TFTTLID 249


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 104/188 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ ++GL  + ITY+ +I  +C    +D A+   +K+T   ++     +  LI+ +C
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G    A   F +M++KG    VVTY+ LI GY        AF VY EM    ISPN  
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ +I GLC+  +M EA+  F    +  ++P  VTY ++I G+C++G  +EA  L D M
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 194 LRNGIMPD 201
           +  G +PD
Sbjct: 394 VGKGFVPD 401



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E    A   L  ++ + GL PD + Y  +I  +     L EA  L++ +      PN +
Sbjct: 484 REHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVV 543

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI+  CK G MD A ++  + L      N +TY C +D   +  NM+ A  ++  M
Sbjct: 544 TYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM 603

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ++   VSY+ILI G C+ G +EEA    H   DN +LPD +TY+ +I   CK    
Sbjct: 604 LKGFLATT-VSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNL 662

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA++L+ +ML  G+ PD L  S L 
Sbjct: 663 QEAIKLWHTMLDKGLKPDTLAYSFLV 688



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +  ++  A  L  ++  +G  PD  TY  +I G CS+ R+ EA +  + L     K N++
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ L+  +CKEGR  DA      M+E+G   ++V Y+ LIDG  +  + ++ F + +EM
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+ V Y+ +ID   K G ++EA   +   +D   LP+VVTY  LI G CKAG  
Sbjct: 499 HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLM 558

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            +A  L    L + + P+ +      D+ L   G+ E  +
Sbjct: 559 DKAELLSKETLVSDVTPNHITYGCFLDH-LTRGGNMEKAV 597



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 1/195 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A  L+  + D G  P+++TY  +I G C    +D+A  L ++     + PN I
Sbjct: 519 KAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHI 578

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   +D   + G M+ A  +   ML KG  A  V+Y+ LI G+ +   ++ A  +   M
Sbjct: 579 TYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGM 637

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N+I P+ ++YS +I   CKR  ++EA+  +H  LD  L PD + Y+ L+ G C AG  
Sbjct: 638 TDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGEL 697

Query: 184 TEAMQLYDSMLRNGI 198
            +A +L D M+R G+
Sbjct: 698 EKAFELRDEMIRRGM 712



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 100/193 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +D A+    ++T   +E  +  YN++I GYC L     A   F+++    L P  +
Sbjct: 239 RRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVV 298

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI  +C EG    A  ++++M  KG   N  T++ +I G  ++  M  A  ++ EM
Sbjct: 299 TYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM 358

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+ V+Y+++I+G C+ G + EA +     +    +PD  TY  LI G C  GR 
Sbjct: 359 KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418

Query: 184 TEAMQLYDSMLRN 196
           +EA +  D + ++
Sbjct: 419 SEAKEFVDDLHKD 431



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 35/246 (14%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA   F ++ D+GL P ++TY ++I GYC+     +A +++ ++T   + PN+ TFT +I
Sbjct: 280 AAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAII 339

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C+   M +A  +F +M E+    + VTY+ +I+G+ +S N+  AF + +EM      
Sbjct: 340 SGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFV 399

Query: 130 PNIVSYSILIDGLCKRGLMEEA------LYAFHCALDN---------------------- 161
           P+  +Y  LI GLC  G + EA      L+  H  L+N                      
Sbjct: 400 PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSA 459

Query: 162 -------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
                   +  D+V YAILI G  +         L   M  +G+ PD ++ + + D + +
Sbjct: 460 CRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSK 519

Query: 215 SSGSQE 220
           +   +E
Sbjct: 520 AGNLKE 525



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 26/226 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++    +  L LF  +    ++PDI  Y+ ++   C L   ++A ++   +   Q K +
Sbjct: 106 LLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLS 165

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV----------------------- 98
            + + +LI   CK  R+ +A  + + +++KG +ANVV                       
Sbjct: 166 IVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCA 225

Query: 99  ---TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
              TYS LID + +   M +A    ++M + +I   +  Y+ LI+G CK G    A Y F
Sbjct: 226 NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYF 285

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              +D  L P VVTY  LI GYC  G   +A ++Y+ M   GI P+
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPN 331



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 74/133 (55%), Gaps = 1/133 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  +++ A++L   +  +G     ++YN +I G+C L +++EA +L   +T   + P+
Sbjct: 587 LTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ +I   CK   + +A  ++  ML+KG K + + YS L+ G   +  ++ AF++ +
Sbjct: 646 YITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRD 705

Query: 122 EMCENNISPNIVS 134
           EM    +  N V+
Sbjct: 706 EMIRRGMRSNHVT 718



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 9/154 (5%)

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L P   T + L++   +  R +D  ++F  ++    + ++  YS ++    + ++   A
Sbjct: 91  NLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKA 150

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            ++   M  N    +IV Y++LI GLCK   + EAL   +C +   L  +VVTY      
Sbjct: 151 KEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY------ 204

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               G+  EA  L+  M   G+  + +  S L D
Sbjct: 205 ---YGKFNEAELLFKEMGEKGLCANHITYSILID 235



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            LKP+ +   +++ +      M D  +M            V T S L++G  + +     
Sbjct: 66  NLKPSHVDKVLMMLSLNDSRLMKDCNLM----------PEVRTLSALLNGLLRFRRFNDV 115

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +++++   N+ P+I  YS ++  LC+     +A    H    N     +V Y +LI G
Sbjct: 116 LLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHG 175

Query: 177 YCKAGRPTEAMQLYDSMLRNGI 198
            CK+ R  EA+++ + +++ G+
Sbjct: 176 LCKSRRIWEALEIKNCLMQKGL 197


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 LMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++  ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++ +    L P+
Sbjct: 216 LCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G MP
Sbjct: 396 DVWTGSKLLKEMQRDGYMP 414



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 103/191 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 122/219 (55%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +    +L   +   G+ PD+I+YNT+I G+C    +DEA +L E +  V LKP+
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S ++  L+  +CK GR+D A   F KML  G    VVTY+ ++ G F+++    A ++Y 
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    +I +Y+I+++GLCK   ++EA+  F       L  +++T+ I+I    K G
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  +AM L+ ++  NG++ + ++   L   NL   GS E
Sbjct: 673 RKEDAMDLFAAIPANGLVQN-VVTYRLVVENLIEEGSLE 710



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 108/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  +F Q+ D G++P+I TYN +I GY S+ +  E V++ E+++    KPN  T+  
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS 313

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CK GR  +A   F  M+ KG K +V TY  ++ GY     +    D+   M  N 
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG 373

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISPN   ++I      K G++++A+  F+      L PD V+Y  LI   CK GR  +A 
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             ++ M+  G+ PD ++ S+L
Sbjct: 434 VKFNQMINEGVTPDIVVFSSL 454



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGL---EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           L  E   + AL+L   + D  +    P++++Y+T+I G+ +  ++D+   LF ++    +
Sbjct: 175 LCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGI 234

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            P+ +T+T +ID  CK    D A  +F +M++ G K N+ TY+CLI GY      K    
Sbjct: 235 PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR 294

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + EEM      PN  +Y  L++ LCK G   EA + F   +   + P V TY I++ GY 
Sbjct: 295 MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYA 354

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
             G  +E   L + M+ NGI P+
Sbjct: 355 TKGALSEMHDLLNLMVANGISPN 377



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 107/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   GL+PD  +YNT++ GYC   R+D A   F K+    + P  +T+  
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R  +A  ++  M+  G K ++ TY+ +++G  KS  +  A  +++ +C   
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++++I+I  L K G  E+A+  F     N L+ +VVTY +++    + G   E  
Sbjct: 654 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFD 713

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+ +M +NG  P+  +L+ L
Sbjct: 714 SLFSAMEKNGTAPNSQMLNAL 734



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
           HL+     FG +   G   D I  N ++ G C   R+ EA+  L +++  +   P+++++
Sbjct: 109 HLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSY 168

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKA---NVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            IL+   C E R ++A  +   M +    +   NVV+YS +I+G+F    +   ++++ E
Sbjct: 169 NILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLE 228

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I P++V+Y+ +IDGLCK  L + A   F   +DN + P++ TY  LI GY   G+
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             E +++ + M   G  P+     +L +Y
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNY 317



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 109/193 (56%), Gaps = 1/193 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA +K F Q+ + G+ PDI+ +++++ G C++++ ++  +LF ++  V + PN + F  +
Sbjct: 431 DAEVK-FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   CKEGR+ +   +   +   G + +V++Y+ LIDG+  +  +  A  + E M    +
Sbjct: 490 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 549

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+  SY+ L+ G CK G ++ A   F   L N + P VVTY  ++ G  +  R +EA +
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 189 LYDSMLRNGIMPD 201
           LY +M+ +G   D
Sbjct: 610 LYLNMINSGTKWD 622



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 102/195 (52%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +   G+ P+   +N     Y     +D+A+ +F K+    L P+++++  LIDA C
Sbjct: 365 LLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALC 424

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+DDA + F++M+ +G   ++V +S L+ G       +   +++ EM    I PNIV
Sbjct: 425 KLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIV 484

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ ++  LCK G + E            + PDV++Y  LI G+C AG   EA +L + M
Sbjct: 485 FFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGM 544

Query: 194 LRNGIMPDGLLLSTL 208
           +  G+ PD    +TL
Sbjct: 545 VSVGLKPDSFSYNTL 559



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 102/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F ++  +GL PD ++Y  +I   C L R+D+A   F ++    + P+ + F+ 
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS 453

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C   + +    +F +ML  G   N+V ++ ++    K   +     + + +    
Sbjct: 454 LVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG 513

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+++SY+ LIDG C  G ++EA       +   L PD  +Y  L+ GYCKAGR   A 
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             +  ML NGI P  +  +T+
Sbjct: 574 SHFRKMLSNGITPGVVTYNTI 594



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 14/217 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYC-------SLNRLDEAVQLFEKLT---CVQ 57
           L  ALKLF +L        ++ +N ++           + +  +  V LF ++     ++
Sbjct: 30  LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + PN  T++ILI  FC+ G ++     F  +L+ G + + +  + L++G    + +  A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL---PDVVTYAIL 173
           DV  + M E    P+ VSY+IL+ GLC     EEAL   H   D+ +    P+VV+Y+ +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I G+   G+  +   L+  M+  GI PD +  +T+ D
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVID 246



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 2   LIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LIK+   +D A  LF ++  +GL PD++TYNTI+ G     R  EA +L+  +   + + 
Sbjct: 800 LIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 859

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+ I+++  CK   +D+A  MF  +  KG + N++T++ +I    K    + A D++
Sbjct: 860 NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 919

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEE 150
             +  N + P++V+Y ++ + L + G +EE
Sbjct: 920 AAIPANGLVPDVVTYRLVAENLIEEGSLEE 949



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 92/173 (53%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           R+D+A  LF ++    L P+ +T+  ++    + GR  +A  ++  M+    + N+ TY+
Sbjct: 806 RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 865

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +++G  KS  +  AF +++ +C   +  NI++++I+I  L K G  E+A+  F     N
Sbjct: 866 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 925

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            L+PDVVTY ++     + G   E   L+ +M ++G   D  LL+ L    LQ
Sbjct: 926 GLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQ 978



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 29/247 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+E  L+    LF  +   G  P+    N ++        +  A     KL        
Sbjct: 703 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 762

Query: 62  SITFTILIDAFC----------------------------KEGRMDDATMMFSKMLEKGP 93
           + T ++LI  F                             K  R+DDA  +F +ML KG 
Sbjct: 763 ASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGL 822

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
             +VVTY+ ++ G F++     A ++Y  M  +    NI +Y+I+++GLCK   ++EA  
Sbjct: 823 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFK 882

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
            F       L  +++T+ I+I    K GR  +AM L+ ++  NG++PD +    +A+ NL
Sbjct: 883 MFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAE-NL 941

Query: 214 QSSGSQE 220
              GS E
Sbjct: 942 IEEGSLE 948



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 89/183 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D+A   F ++   G+ P ++TYNTI+ G     R  EA +L+  +     K +  
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+++  CK   +D+A  MF  +  KG + N++T++ +I    K    + A D++  +
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  N+V+Y ++++ L + G +EE    F     N   P+      L+R     G  
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744

Query: 184 TEA 186
           + A
Sbjct: 745 SRA 747



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 28/215 (13%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  L  +GL+ +IIT+N +I       R ++A+ LF  +    L  N +T+ +
Sbjct: 639 VDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRL 698

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++   +EG +++   +FS M + G   N    + L+       ++  A     ++ E N
Sbjct: 699 VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 758

Query: 128 ISPNIVSYSILI---------------------------DGLCKRG-LMEEALYAFHCAL 159
            S    + S+LI                             L K+   +++A   F   L
Sbjct: 759 FSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREML 818

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
              L PDVVTY  ++ G  + GR +EA +LY SM+
Sbjct: 819 MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +D A K+F  L  +GL+ +IIT+N +I       R ++A+ LF  +    L P+ +T+ +
Sbjct: 877  VDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRL 936

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            + +   +EG +++   +F  M + G   +    + L+    +  ++  A     ++ E N
Sbjct: 937  VAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKN 996

Query: 128  ISPNIVSYSILIDGLCKRG 146
             S    + S LI  L  RG
Sbjct: 997  FSLEASTTSELIS-LFSRG 1014


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 118/208 (56%), Gaps = 6/208 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H      L+ Q+   GL PD++T N +I   C++NR++E +     +      P+ +TFT
Sbjct: 106 HYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFT 165

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C E R+ +AT +F +M + G   NVVTY  LI G     N+  A   ++EM  +
Sbjct: 166 TLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLND 225

Query: 127 ------NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
                 N  PN++SYSI+IDGLCK G  EEA+  F+  +D  + P+VVT+++LI   CK 
Sbjct: 226 TSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKE 285

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G+  +A +L + M++ GI+P+    ++L
Sbjct: 286 GQVIKAKKLLEMMIQIGIVPNLFTYTSL 313



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 10/214 (4%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQL 58
           E  +  A KLF ++   G  P+++TY T+I G C+L  ++ A++  +++           
Sbjct: 174 EHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNC 233

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +PN I+++I+ID  CK G  ++A  +F++M+++G + NVVT+S LID   K   +  A  
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + E M +  I PN+ +Y+ LI G C  G +  A   F         PDV++Y +LI GYC
Sbjct: 294 LLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC 353

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD----GLLLSTL 208
           K  +  EAM+L++ ML  G+ PD    G+LL  L
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKAL 387



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 128/238 (53%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +LF  +  +G EPD+I+YN +I GYC   +++EA++LF ++  V + P+  T  +
Sbjct: 323 LNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGV 382

Query: 68  LI-----------------------------------DAFCKEGRMDDATMMFSKMLEKG 92
           L+                                   D  CK G + +A  +F+++    
Sbjct: 383 LLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYN 442

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            K ++ T+ CLIDG  K+  +++A++++E++ E  I P+ ++YS +I G CK+G +++A 
Sbjct: 443 MKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKAN 502

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             F    +N   PD++TY+IL+RG+ ++ +  + +QL   M+   + PD  + + + D
Sbjct: 503 ILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVED 560



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 106/180 (58%), Gaps = 1/180 (0%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P++I+Y+ II G C +   +EA+ LF ++    ++PN +TF++LID  CKEG++  A  
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +   M++ G   N+ TY+ LI G+    ++ SA +++  M      P+++SY++LI+G C
Sbjct: 294 LLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC 353

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   +EEA+  F+  L   + PDV T  +L++    AG+  +A +L+  +++   MP  L
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF-RVIKPYAMPKDL 412



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + + A+ LF ++ D+G++P+++T++ +I   C   ++ +A +L E +  + + PN
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LI  FC  G ++ A  +F  M  KG + +V++Y+ LI+GY K+  ++ A  ++ 
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366

Query: 122 EMCENNISPNIVSYSILI-----------------------------------DGLCKRG 146
           EM    + P++ +  +L+                                   DGLCK G
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNG 426

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + EA+  F+     ++  D+ T+  LI G CKAG+   A +L++ +   GI PD +  S
Sbjct: 427 YIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYS 486

Query: 207 TL 208
           ++
Sbjct: 487 SM 488



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 18/196 (9%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           I ++N ++ G   +    +   L++++    L P+ +T  ILI+  C   R+++     +
Sbjct: 91  IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMA 150

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            ++ +G   +VVT++ LI G      +  A  ++  M +   +PN+V+Y  LI GLC  G
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210

Query: 147 LMEEAL------------YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            +  AL            Y F+C       P+V++Y+I+I G CK G   EA+ L++ M+
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCR------PNVISYSIIIDGLCKVGNWEEAICLFNEMV 264

Query: 195 RNGIMPDGLLLSTLAD 210
             G+ P+ +  S L D
Sbjct: 265 DQGVQPNVVTFSVLID 280



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 90/151 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A+KLF +L    ++ DI T+  +I G C   +L+ A +LFEKL    ++P+
Sbjct: 422 LCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPD 481

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ ++ +I  FCK+G++D A ++F KM E G   +++TYS L+ G+++S  ++    +  
Sbjct: 482 AMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLH 541

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M E ++ P+   Y+I+ D +CK    +E L
Sbjct: 542 RMIEKDVWPDDGIYAIVEDMVCKDEKYKEWL 572



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +LF  +    +  D+      + G C    + EA++LF +L    +K +  TF  
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G+++ A  +F K+ E+G + + + YS +I G+ K   +  A  ++++M EN 
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++++YSIL+ G  +   +E+ +   H  ++  + PD   YAI+    CK  +  E +
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWL 572

Query: 188 QLYDSML----RNG 197
            L         RNG
Sbjct: 573 DLLQRFFVQKHRNG 586



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 60  PNSITFTILIDAF---CKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           P  I+F   I  F   CK G +    A   F  M+      ++ +++ L+ G  K ++  
Sbjct: 54  PERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYS 108

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
             F +Y++M    + P++++ +ILI+ LC    + E L A    +    +PDVVT+  LI
Sbjct: 109 QVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLI 168

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +G C   R  EA +L+  M + G  P+ +   TL
Sbjct: 169 KGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTL 202



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 66/121 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A +LF +L + G++PD + Y+++I G+C   ++D+A  LF+K+      P+
Sbjct: 457 LCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPD 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++IL+  F +  +++    +  +M+EK    +   Y+ + D   K +  K   D+ +
Sbjct: 517 LITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576

Query: 122 E 122
            
Sbjct: 577 R 577


>gi|147789026|emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
          Length = 993

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 110/196 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE HLD AL L   +  +G+  +I  YN++I G C    L +A +LF+ L  + L P
Sbjct: 648 VLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVP 707

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+  LID+ CKEG + DA  +F KM+ KG   NV  Y+ LIDGY K  NM+ A ++ 
Sbjct: 708 SEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEALNLL 767

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            ++    I P+  + S LI+G C +G ME AL  F       +LPD + +  L+RG C  
Sbjct: 768 IDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAK 827

Query: 181 GRPTEAMQLYDSMLRN 196
           GR  EA  +   ML+ 
Sbjct: 828 GRMEEARGILREMLQT 843



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 112/205 (54%), Gaps = 5/205 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A++   ++ ++G+ PD ++Y  +I G+     +++A+   EK+    LKPN +
Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T ++  FCK+G++D+A  +F  +   G + +   Y  LIDG+    ++   F + E+M
Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDM 289

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISP+IV+Y+ +I+GLCK G   EA       +   +  D VT++ L+ GY +    
Sbjct: 290 EKRGISPSIVTYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENV 344

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
              ++    +  +G+  D ++ +T+
Sbjct: 345 KGILETKRRLEEDGVCIDLVMCNTI 369



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 7/184 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D++ Y++ ICGY     L EA++  +++    + P+++++TILID F +EG ++ A    
Sbjct: 157 DVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFL 216

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLCK 144
            KM + G K N+VTY+ ++ G+ K   +  A+ +++ M EN  I  +   Y  LIDG C 
Sbjct: 217 EKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFK-MVENLGIEVDEFMYVTLIDGFCT 275

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           RG ++             + P +VTY  +I G CKAGR +EA +     +  GI  D + 
Sbjct: 276 RGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADE-----VSKGIAGDAVT 330

Query: 205 LSTL 208
            STL
Sbjct: 331 FSTL 334



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 1/181 (0%)

Query: 31  NTIICGYCSLNRLDEAVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +++I G+C +++   AV  FE  +    L+PN  T T L+ A  + GR+ + + + S M 
Sbjct: 91  SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWME 150

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +    +VV YS  I GYF+   +  A   ++EM E  I+P+ VSY+ILIDG  + G +E
Sbjct: 151 REEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVE 210

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A+        + L P++VTY  ++ G+CK G+  EA  L+  +   GI  D  +  TL 
Sbjct: 211 KAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLI 270

Query: 210 D 210
           D
Sbjct: 271 D 271



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  LF  + + G+E D   Y T+I G+C+   +D    L E +    + P+ +
Sbjct: 240 KKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIV 299

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I+  CK GR  +A       + KG   + VT+S L+ GY + +N+K   +    +
Sbjct: 300 TYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRL 354

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E+ +  ++V  + +I  L   G +E+A YAF+  +    L+ D VTY  +I GYC+  R
Sbjct: 355 EEDGVCIDLVMCNTIIKALLMVGALEDA-YAFYKGMSGMDLVADSVTYCTMINGYCRVXR 413

Query: 183 PTEAMQLYDSMLRNGI 198
             EA++++D   +  I
Sbjct: 414 IEEALEIFDEFRKTSI 429



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +  R L P+I T   ++     L R+ E   L   +   +   + + ++  I  + +EG 
Sbjct: 114 VNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGV 173

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           + +A     +M+EKG   + V+Y+ LIDG+ +   ++ A    E+M ++ + PN+V+Y+ 
Sbjct: 174 LVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTA 233

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           ++ G CK+G ++EA   F    +  +  D   Y  LI G+C  G       L + M + G
Sbjct: 234 IMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRG 293

Query: 198 IMP 200
           I P
Sbjct: 294 ISP 296



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 79/146 (54%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + ++I+ID  CKEG +D A  + + + +KG   N+  Y+ +I+G  +   +  AF +++ 
Sbjct: 640 VDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDS 699

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + + ++ P+ ++Y+ LID LCK G + +A   F   +     P+V  Y  LI GYCK G 
Sbjct: 700 LEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGN 759

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA+ L   +    I PD   +S L
Sbjct: 760 MEEALNLLIDLKARCIKPDEFTVSAL 785



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 1/159 (0%)

Query: 53  LTCVQLKPNSITFTI-LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ 111
           LT +Q+  +++ F + ++ +  K GR+ DA  +     E  P  ++V YS +ID   K  
Sbjct: 594 LTNIQVNTSAVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEG 653

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           ++  A D+   + +  I+ NI +Y+ +I+GLC++G + +A   F       L+P  +TYA
Sbjct: 654 HLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYA 713

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI   CK G   +A QL++ M+  G  P+  + ++L D
Sbjct: 714 TLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLID 752



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 7/187 (3%)

Query: 30  YNTIICGYC-SLNRLDEAVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++++I G C  L   ++A+ + +  LT + + P+S TF  LI +F  +G+M  A  +   
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 88  MLE---KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNIVSYSILIDGLC 143
           M     + P  N V+ S +I G+ K    + A   +E    + +  PNI + + L+  L 
Sbjct: 76  MTHDKVRYPFGNFVS-SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALF 134

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G + E             + DVV Y+  I GY + G   EA++ +  M+  GI PD +
Sbjct: 135 QLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTV 194

Query: 204 LLSTLAD 210
             + L D
Sbjct: 195 SYTILID 201



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 5/196 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E ++   L+   +L + G+  D++  NTII     +  L++A   ++ ++ + L  +S
Sbjct: 339 IEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADS 398

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +I+ +C+  R+++A  +F +   K   ++V  Y C+I G  +   +  A +V+ E
Sbjct: 399 VTYCTMINGYCRVXRIEEALEIFDE-FRKTSISSVSCYKCMIYGLCRKGMVDMAIEVFIE 457

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA--LDNHLLPDVVTYAILIRGYCKA 180
           + E  +     +Y+ LI    +    E  L   H    L       +   AI     CK 
Sbjct: 458 LNEKGLELVSGTYTSLIKASFEEQGAEGVLKFVHRIENLGREAFDTISNSAICF--LCKR 515

Query: 181 GRPTEAMQLYDSMLRN 196
           G    A ++Y  M R 
Sbjct: 516 GFSLAACEVYMRMRRK 531


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------TCVQLKPNSITFT 66
           +L  ++  R + P ++T+  ++   C   R+DEA+Q+F++L        V ++P+ + F 
Sbjct: 302 ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFN 361

Query: 67  ILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LID  CK G+ +D   +  +M +    + N VTY+CLIDG+FK+ N   A +++ +M E
Sbjct: 362 TLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + PN+++ + L+DGLCK G +  A+  F+      L  +  TY  LI  +C       
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           AMQ ++ ML +G  PD ++  +L
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSL 504



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 7/192 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRG------LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           L K   +D AL++F +L  +G      +EPD++ +NT+I G C + + ++ + L E++  
Sbjct: 326 LCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKM 385

Query: 56  VQL-KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
             + +PN++T+  LID F K G  D A  +F +M E+G + NV+T + L+DG  K   + 
Sbjct: 386 GNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVH 445

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A + + EM    +  N  +Y+ LI   C    +  A+  F   L +   PD V Y  LI
Sbjct: 446 RAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLI 505

Query: 175 RGYCKAGRPTEA 186
            G C AGR  +A
Sbjct: 506 SGLCIAGRMNDA 517



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 90/188 (47%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P+ +TYN +I G+      D A +LF ++    ++PN IT   L+D  CK GR+  A  
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
            F++M  KG K N  TY+ LI  +    N+  A   +EEM  +  SP+ V Y  LI GLC
Sbjct: 450 FFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLC 509

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
             G M +A              D   Y +LI G+CK  +     +L   M   G+ PD +
Sbjct: 510 IAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTI 569

Query: 204 LLSTLADY 211
             +TL  Y
Sbjct: 570 TYNTLISY 577



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A++ F ++  +GL+ +  TY  +I  +C +N ++ A+Q FE++      P+
Sbjct: 438 LCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPD 497

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LI   C  GRM+DA+++ SK+   G   +   Y+ LI G+ K + ++  +++  
Sbjct: 498 AVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLT 557

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + P+ ++Y+ LI  L K G    A       +   L P VVTY  +I  YC   
Sbjct: 558 EMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKK 617

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              E M+++  M     +P
Sbjct: 618 NVDEGMKIFGEMCSTSKVP 636



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 98/199 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K  + D A +LF Q+ + G++P++IT NT++ G C   R+  AV+ F ++    LK N
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+T LI AFC    ++ A   F +ML  G   + V Y  LI G   +  M  A  V  
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++     S +   Y++LI G CK+  +E          +  + PD +TY  LI    K G
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A ++ + M++ G+ P
Sbjct: 583 DFATASKVMEKMIKEGLRP 601



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 7/203 (3%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + LKL G   DR        YN +I G+C   +L+   +L  ++    +KP++IT+  LI
Sbjct: 522 SKLKLAGFSLDRS------CYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLI 575

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNI 128
               K G    A+ +  KM+++G + +VVTY  +I  Y   +N+     ++ EMC  + +
Sbjct: 576 SYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKV 635

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN V Y+ILID LC+   ++ A+          + P+  TY  +++G        +A +
Sbjct: 636 PPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFE 695

Query: 189 LYDSMLRNGIMPDGLLLSTLADY 211
           L D M+     PD + +  L ++
Sbjct: 696 LMDRMVEEACRPDYITMEVLTEW 718



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 1/142 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKPNSITFTIL 68
            A K+  ++   GL P ++TY  II  YCS   +DE +++F ++ +  ++ PN++ + IL
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA C+   +D A  +   M  K  + N  TY+ ++ G    + +  AF++ + M E   
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC 705

Query: 129 SPNIVSYSILIDGLCKRGLMEE 150
            P+ ++  +L + L   G +E+
Sbjct: 706 RPDYITMEVLTEWLSAVGEIEK 727



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           E V L  KL    + P+    T L+   C + +   A  +   ++  G   +  + + L+
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALL 288

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN--- 161
               + +++K   ++  EM +  I P++V++ IL++ LCK   ++EAL  F         
Sbjct: 289 TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348

Query: 162 ---HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
               + PDVV +  LI G CK G+  + + L + M
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM 383


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 10/207 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-------KPN 61
           D A KL  ++T++GL PD++T+N+ I   C   ++ EA ++F  +   Q+       KPN
Sbjct: 236 DEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDM---QMDGELGLPKPN 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +++  FC+EG M++A  +   M + G   ++ +Y+  + G  ++  +     V +
Sbjct: 293 VVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLD 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM EN I PNI SY+I++DGLC+  +M +A       + N + PD VTY  L+ GYC  G
Sbjct: 353 EMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKG 412

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  + + M+R G  P+    +TL
Sbjct: 413 KVFEAKAILNEMIRKGCHPNTYTCNTL 439



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 22/209 (10%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G+ PD +TY T++ GYCS  ++ EA  +  ++      PN+ T   L++
Sbjct: 382 ARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLN 441

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC------ 124
           +  KEGR  +A  M  KM EK  + + VT + +++G  ++  ++ A +V  EM       
Sbjct: 442 SLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNS 501

Query: 125 ---EN----------NIS---PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
              EN          N+S   P++++Y+ LI+GLCK G +EEA   F   +  +L PD V
Sbjct: 502 LGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSV 561

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           TY   +  +CK G+ + A+++   M RNG
Sbjct: 562 TYDTFVLNFCKQGKISSALRVLKDMERNG 590



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+ITY T+I G C + +L+EA + F ++    L P+S+T+   +  FCK+G++  A  +
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRV 582

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M   G    + TY+ LI G      +   + + +EM E  I P+I +Y+ +I+ LC+
Sbjct: 583 LKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCE 642

Query: 145 RGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            G  ++A    H  LD  ++ P+V ++ ILI+ +CK+G    A +L+D  L
Sbjct: 643 GGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 6/188 (3%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L+  +   G+ P+  T+N +I   C  N LD A +LF+K++    +PN  T  IL+  FC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR   A       +  G   N V Y+ L+  + K      A  + E M E  + P++V
Sbjct: 198 RAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 134 SYSILIDGLCKRGLMEEALYAFH-CALDNHL---LPDVVTYAILIRGYCKAGRPTEAMQL 189
           +++  I  LC+ G + EA   F    +D  L    P+VVT+ ++++G+C+ G   EA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 190 YDSMLRNG 197
            ++M + G
Sbjct: 316 VETMKKGG 323



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 116/232 (50%), Gaps = 26/232 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L     +  ++ + G+EP+I +YN ++ G C  + + +A +L + +    + P+
Sbjct: 338 LLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD 397

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T L+  +C +G++ +A  + ++M+ KG   N  T + L++  +K      A ++ +
Sbjct: 398 TVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQ 457

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA------------------------LYAFHC 157
           +M E +   + V+ +I+++GLC+ G +E+A                        + + H 
Sbjct: 458 KMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHN 517

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              N  +PDV+TY  LI G CK G+  EA + +  M+   + PD +   T  
Sbjct: 518 VSTN--VPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFV 567



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 4/177 (2%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           NR      L+  +    + P + TF +LI + C+   +D A  +F KM EKG + N  T 
Sbjct: 130 NRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTV 189

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
             L+ G+ ++   K A +  +     N+  N V Y+ L+   CK+ + +EA        +
Sbjct: 190 GILVRGFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTE 247

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             LLPDVVT+   I   C+AG+  EA +++  M  +G +  GL    +  +NL   G
Sbjct: 248 KGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGEL--GLPKPNVVTFNLMLKG 302



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 22/213 (10%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +  ++  +G  P+  T NT++       R  EA ++ +K+     + +++T  I+++
Sbjct: 417 AKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVN 476

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKA----------------------NVVTYSCLIDGYF 108
             C+ G ++ A+ + S+M   G  +                      +V+TY+ LI+G  
Sbjct: 477 GLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLC 536

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K   ++ A   + EM   N+ P+ V+Y   +   CK+G +  AL        N     + 
Sbjct: 537 KVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQ 596

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           TY  LI G    G+  E   L D M   GI PD
Sbjct: 597 TYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD 629



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  + +AL++   +   G    + TYN++I G  S  ++ E   L +++    + P+  
Sbjct: 572 KQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDIC 631

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSA---FDV 119
           T+  +I+  C+ G+  DAT +  +ML+KG    NV ++  LI  + KS + K A   FDV
Sbjct: 632 TYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDV 691

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              +C +  +     YS++ + L   G + +A   F  +L+  LL     Y  LI   CK
Sbjct: 692 ALSVCGHKEAL----YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCK 747

Query: 180 AGRPTEAMQLYDSMLRNG 197
            GR  +A  L   ++  G
Sbjct: 748 DGRLDDAHGLLQKLIDKG 765



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 6/212 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A K F ++  + L PD +TY+T +  +C   ++  A+++ + +        
Sbjct: 535 LCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKT 594

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI     +G++ +   +  +M E+G   ++ TY+ +I+   +    K A  +  
Sbjct: 595 LQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLH 654

Query: 122 EMCENN-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALD--NHLLPDVVTYAILIRGYC 178
           EM +   +SPN+ S+ ILI   CK G  + A   F  AL    H       Y+++     
Sbjct: 655 EMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGH---KEALYSLMFNELL 711

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             G+ ++A +L+++ L   ++    +   L D
Sbjct: 712 AGGKLSDAKELFEASLERSLLSKNFMYEDLID 743



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 4/178 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSITFTILIDAF 72
           L  ++ +RG+ PDI TYN +I   C   +  +A  L  E L    + PN  +F ILI AF
Sbjct: 617 LMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAF 676

Query: 73  CKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           CK G    A  +F   L   G K  +  YS + +       +  A +++E   E ++   
Sbjct: 677 CKSGDFKVACELFDVALSVCGHKEAL--YSLMFNELLAGGKLSDAKELFEASLERSLLSK 734

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
              Y  LID LCK G +++A       +D     D  ++  +I G  K G   +A +L
Sbjct: 735 NFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A ++  ++  +G  PD  TY  +I   C   +++++  LF+++    + P+  T+TI
Sbjct: 433 FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTI 492

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A   F +M   G   NVVTY+ L+  Y KS+ +  A D++  M +  
Sbjct: 493 LIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA 552

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH----------------LLPDVVTYA 171
             PN V+YS LIDGLCK G +++A   +   +                   + P+VVTY 
Sbjct: 553 CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYG 612

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G CKA + ++A +L D+ML  G  P+ ++   L D
Sbjct: 613 ALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALID 651



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 105/189 (55%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P+++TY  +I G C   ++ +A +L + +     +PN I +  LID FCK G++D+A 
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F +M + G   +V TY+ LID  FK   +  A  V  EM  ++ +PN+V+Y+ +IDGL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            K G +E+AL       +    P+VVTY  LI G  K G+   +++L+  M   G  P+ 
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783

Query: 203 LLLSTLADY 211
           +    L ++
Sbjct: 784 VTYRVLINH 792



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 103/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L   +   G EP+ I Y+ +I G+C + ++D A ++F ++T     P+
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID   K+GR+D A  + S+ML      NVVTY+ +IDG  K   ++ A ++  
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   SPN+V+Y+ LIDGL K G  + +L  F         P+ VTY +LI   C AG
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797

Query: 182 RPTEAMQLYDSM 193
              EA  L D M
Sbjct: 798 LLDEAHLLLDEM 809



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ +  LF ++   G+ PD+ TY  +I  +C    +++A   F+++  V   PN +T+T 
Sbjct: 468 VEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTA 527

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           L+ A+ K  ++  A  +F +M++     N VTYS LIDG  K+  ++ A +VYE++    
Sbjct: 528 LLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTS 587

Query: 125 ---------ENN----ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
                    E N    I+PN+V+Y  LIDGLCK   + +A       L     P+ + Y 
Sbjct: 588 GNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYD 647

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G+CK G+   A +++  M + G +P     ++L D
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLID 686



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 115/272 (42%), Gaps = 71/272 (26%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++F ++T  G  P + TY ++I       RLD A+++  ++      PN +T+T 
Sbjct: 659 IDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTA 718

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G ++ A  + S M EKG   NVVTY+ LIDG  K+    ++  ++++M    
Sbjct: 719 MIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALD------------ 160
            +PN V+Y +LI+  C  GL++EA               L  +HCA+             
Sbjct: 779 CAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGL 838

Query: 161 ------NHLLPDVVTYAILIRGYCKAGR-------------------------------- 182
                 +  +P    Y +LI  + KAGR                                
Sbjct: 839 LEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQA 898

Query: 183 ------PTEAMQLYDSMLRNGIMPDGLLLSTL 208
                   EA  LY  M R GI+PD ++  +L
Sbjct: 899 LCLASQVEEAFTLYTEMTRKGIVPDLIVFVSL 930



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA--VQLFEKL-------TCVQLKPN 61
           A KLF ++T  G  P  + YN  I   C    L  A  + L EK+       +CV  K N
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVN 419

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  F+      C  G+ + A  +  +M+ KG   +  TY+ +I    +++ ++ +F +++
Sbjct: 420 TANFS---RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQ 476

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++P++ +Y+ILID  CK GL+E+A   F         P+VVTY  L+  Y K+ 
Sbjct: 477 EMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSK 536

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +  +A  ++  M+     P+ +  S L D   ++   Q+ C
Sbjct: 537 QLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKAC 577



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 88/157 (56%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C + + ++A Q+ +++      P++ T+T +I   C+  +++ + ++F +M   G   +V
Sbjct: 428 CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TY+ LID + K+  ++ A   ++EM     SPN+V+Y+ L+    K   + +A   FH 
Sbjct: 488 YTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHR 547

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            +D    P+ VTY+ LI G CKAG   +A ++Y+ ++
Sbjct: 548 MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 36/224 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL L   + ++G  P+++TY  +I G     + D +++LF+++      PN
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC------------------- 102
            +T+ +LI+  C  G +D+A ++  +M       ++  Y C                   
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEM 842

Query: 103 --------------LIDGYFKSQNMKSAFDVYEEMCENNISPNIVS---YSILIDGLCKR 145
                         LID + K+  +++A ++++E+ E + S N+ S   Y+ LI  LC  
Sbjct: 843 ESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLA 902

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
             +EEA   +       ++PD++ +  L++G  +  +  EA+QL
Sbjct: 903 SQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 11/206 (5%)

Query: 1   MLIKEC--H--LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +L++ C  H   D AL+  G+L D G  P  +TYN ++    S  +++   ++ ++++  
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC--LIDGYFKSQNMK 114
               +  T      A CK GR  DA  M  K        N+ T  C  +I G  ++    
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEK-----EDFNLDTVLCTQMISGLMEASLFN 288

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A      M  N+  PN+V+Y  L+ G  K+          +  +     P+   +  L+
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMP 200
            GYC AG    A +L++ M   G  P
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPP 374



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 23/196 (11%)

Query: 23  LEPDIITYNTIIC-----GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           LE +    +T++C     G    +  +EA+    ++ C    PN +T+  L+  F K+ +
Sbjct: 262 LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 321

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
                 + + M+ +G   N   ++ L+ GY  + +   A+ ++  M      P  V+Y+I
Sbjct: 322 FGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNI 381

Query: 138 LIDGLCKR---------GLME---EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            I  +C +          L+E   E + A  C L+       V  A   R  C  G+  +
Sbjct: 382 FIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK------VNTANFSRCLCGVGKFEK 435

Query: 186 AMQLYDSMLRNGIMPD 201
           A Q+   M+R G +PD
Sbjct: 436 AFQILKEMMRKGFVPD 451



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT---FT 66
           A+L L  ++      P    Y  +I  +    RL+ A++L ++L  V    N  +   + 
Sbjct: 834 ASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYA 893

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI A C   ++++A  ++++M  KG   +++ +  L+ G  +      A  +    C  
Sbjct: 894 SLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHE 953

Query: 127 NIS 129
            ++
Sbjct: 954 GVN 956


>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
 gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
          Length = 244

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L+ ++  +GL PD +TYNT+I G C L RL EA  LF+ +      P+  
Sbjct: 41  KATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLF 100

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++IL+D  CK+G +  A  +F  M     K ++V Y+ L+D   KS N+K A +++ E+
Sbjct: 101 AYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSEL 160

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+  Y+ +I+GLCK GL++EAL AF    ++   PD  +Y ++IRG+ +    
Sbjct: 161 FVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHKDE 220

Query: 184 TEAMQLYDSMLRNGIMPD 201
           + A+ L   M   G + D
Sbjct: 221 SRAVHLIGEMRDRGFIAD 238



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KLF  +  +G +PD+  YN +I GYC   R+D+A QL+ ++    L P+ +T+  LI 
Sbjct: 13  ARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIH 72

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ GR+ +A  +F  M + G   ++  YS L+DG  K   +  AF ++  M  +++ P
Sbjct: 73  GLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKP 132

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V Y+IL+D +CK G +++A   F       L P+V  Y  +I G CK G   EA++ +
Sbjct: 133 DLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAF 192

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            +M  +G  PD         YN+   G  +H
Sbjct: 193 RNMEEDGCPPDEF------SYNVIIRGFLQH 217



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 100/173 (57%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           GY     + EA +LF+ +     KP+   + ILI+ +CK  R+D A  ++++M+ +G   
Sbjct: 3   GYSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTP 62

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           + VTY+ LI G  +   ++ A D+++ M +N   P++ +YSIL+DGLCK+G + +A   F
Sbjct: 63  DKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLF 122

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                + L PD+V Y IL+   CK+G   +A +L+  +   G+ P+  + +T+
Sbjct: 123 RAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTI 175



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 75/131 (57%)

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A  +F  M+ KG K +V  Y+ LI+GY K+  +  A  +Y EM    ++P+ V+Y+ LI
Sbjct: 12  EARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLI 71

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            GLC+ G + EA   F     N  LPD+  Y+IL+ G CK G   +A +L+ +M  + + 
Sbjct: 72  HGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLK 131

Query: 200 PDGLLLSTLAD 210
           PD ++ + L D
Sbjct: 132 PDLVMYNILVD 142



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 65/122 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +L  A +LF  +    L+PD++ YN ++   C    L +A +LF +L    L+PN
Sbjct: 109 LCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPN 168

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T +I+  CKEG +D+A   F  M E G   +  +Y+ +I G+ + ++   A  +  
Sbjct: 169 VQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIG 228

Query: 122 EM 123
           EM
Sbjct: 229 EM 230



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%)

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           GY     +  A  +++ M      P++  Y+ILI+G CK   +++A   ++  +   L P
Sbjct: 3   GYSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTP 62

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D VTY  LI G C+ GR  EA  L+ +M +NG +PD    S L D
Sbjct: 63  DKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLD 107



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A +LF +L  +GL+P++  Y TII G C    LDEA++ F  +      P+  
Sbjct: 146 KSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEF 205

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           ++ ++I  F +      A  +  +M ++G  A+V T
Sbjct: 206 SYNVIIRGFLQHKDESRAVHLIGEMRDRGFIADVGT 241


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 116/199 (58%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  ++LD+A +LF+++    L PNS
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNS 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           ++FT LID  CK+GR+D A  ++ +ML +    +++TY+ LI G  K+ ++K A D+  E
Sbjct: 242 VSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L   +    ++P+  
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE ++DDA  +F +ML+ G   N V+++ LIDG+ K   +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK G +++A    +      L PD +TY  LI G CK G  
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A +LF ++ D GL P+ +++ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK G +  A  + ++M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLMKEMQRDGYVP 414



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 103/189 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   +  A ++++EM +N + PN VS++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L + M   G+ PD
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KITYTTLID 319



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 93/185 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + +  + P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + E     +    + + PDV TY++LI G CK  +  +A +L+D ML NG++P+ +  
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D   +LF ++  RG+ PD++ Y++II G C   R + A  LF ++    + PN
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +LIDA CK G+M++A  +   M+++G   +  TY+ LIDG+     +  A D++ 
Sbjct: 308 VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFV 367

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I  + VSY++LI+G CK G M EA   +   +   ++P V+TY  L+ G  + G
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A  L+  M  + + P+    + L D
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLD 456



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 3/208 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH    + A  LF ++ D G+ P+++T+N +I   C   +++EA  L + +      P++
Sbjct: 284 CHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDT 343

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  LID FC EGR+DDA  +F  M  KG + + V+Y+ LI+GY KS  M  A  +Y E
Sbjct: 344 FTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYRE 403

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P +++Y+ L+ GL + G + +A   F     + L P+  TY IL+ G CK   
Sbjct: 404 MMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNH 463

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +EAM+L+  +  +   P   + + L D
Sbjct: 464 LSEAMELFHYLENHDFQPSIQIFNCLID 491



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 128/221 (57%), Gaps = 3/221 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  L   +  RG  PD  TYNT+I G+C   R+D+A  LF  +    ++ +
Sbjct: 318 LCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETD 377

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++ +LI+ +CK GRM +A  ++ +M+ K     V+TY+ L+ G F+   ++ A++++ 
Sbjct: 378 AVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFG 437

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKA 180
           EM  ++++P   +Y+IL+DGLCK   + EA+  FH  L+NH   P +  +  LI G CKA
Sbjct: 438 EMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH-YLENHDFQPSIQIFNCLIDGLCKA 496

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            +   A +L++ +   G+ P+ ++  T+  + L  SG  E+
Sbjct: 497 RKIEIARELFNRLSHEGLEPN-VITYTVMIHGLCKSGQLEN 536



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 112/204 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +D A  LF  +  +G+E D ++YN +I GYC   R+ EA +L+ ++ C ++ P  IT
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  L+    +EG++ DA  +F +M          TY+ L+DG  K+ ++  A +++  + 
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            ++  P+I  ++ LIDGLCK   +E A   F+      L P+V+TY ++I G CK+G+  
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A  L+  M   G  P+ +  +TL
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTL 559



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQLKP 60
            +  A  L  ++   G  P+++TY T++ G C       AV+L E++        V +KP
Sbjct: 177 RISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKP 236

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + +  +ID+ CK+G +D    +F +M  +G   +VV YS +I G   +   + A  ++
Sbjct: 237 NLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF 296

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  + PN+V++++LID LCK G MEEA +     +     PD  TY  LI G+C  
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLE 356

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  +A  L+ SM   GI  D +  + L +
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVSYNVLIN 386



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 41/241 (17%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            + L+ +++  GL PD IT N +I  YC+LN++D  + +  ++      PN++TFT L+ 
Sbjct: 111 VISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVK 170

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN--- 127
             C   R+ +AT +  KM+  G + NVVTY  L++G   + N   A  ++EEM   N   
Sbjct: 171 GLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGF 230

Query: 128 --------------------------------------ISPNIVSYSILIDGLCKRGLME 149
                                                 ISP++V+YS +I G+C  G  E
Sbjct: 231 GVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWE 290

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            A   F+  +D  + P+VVT+ +LI   CKAG+  EA  L   M++ G  PD    +TL 
Sbjct: 291 GAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350

Query: 210 D 210
           D
Sbjct: 351 D 351



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 110/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A KL+ ++  + + P +ITYNT++ G     ++ +A  LF ++    L P S 
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  CK   + +A  +F  +     + ++  ++CLIDG  K++ ++ A +++  +
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+++Y+++I GLCK G +E A   F    +    P++VT+  L+RG+C+    
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEM 569

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + ++L   M      PD   +S + D
Sbjct: 570 QKVVELLQEMAEKDFSPDASTISIVVD 596



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A  LFG++    L P+  TYN ++ G C  N L EA++LF  L     +P+
Sbjct: 423 LFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPS 482

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F  LID  CK  +++ A  +F+++  +G + NV+TY+ +I G  KS  +++A D++ 
Sbjct: 483 IQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFL 542

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   +PN+V+++ L+ G C+   M++ +       +    PD  T +I++    K  
Sbjct: 543 GMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDE 602

Query: 182 RPTEAMQLYDSMLRNG 197
           +  E + L  +    G
Sbjct: 603 KYREYLHLLPTFPAQG 618



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 41/241 (17%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  L D    P I ++NT++     + R  + + L+++++ + L P+ IT  ILI+
Sbjct: 76  AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C   ++D    +  +ML +G   N VT++ L+ G      +  A  +  +M      P
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195

Query: 131 NIVSYSILIDGLCKRG-------LMEEALY---AFHCALDNHLL---------------- 164
           N+V+Y  L++GLC  G       L EE L     F   +  +L+                
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255

Query: 165 ---------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDVV Y+ +I G C  GR   A  L++ M+  G+ P+ +  + L 
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLI 315

Query: 210 D 210
           D
Sbjct: 316 D 316



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 56  VQLKPNSITFTILIDAFCKEG--RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           V   P+       + + CK G  +  +A  +F+ +++  P   + +++ L+    K +  
Sbjct: 49  VSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRY 108

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
                +Y+ M    ++P+ ++ +ILI+  C    ++  L      L     P+ VT+  L
Sbjct: 109 FDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSL 168

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++G C   R +EA  L   M+R G  P+ +   TL
Sbjct: 169 VKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTL 203


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L  +L D G+ P++  YN +I   C   R D+A +LF+++    L+PN
Sbjct: 313 LRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK------------ 109
            +T+ ILI A CK G ++DA  +F KM +KG K  V  Y+ LI+GY K            
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 110 -----------------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                  + ++ S  +++ EM E  I+ N  +++ LI+G CK  
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDK 492

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M+EA   F   +D++++P+ VT+ ++I GYC  G   +A QLYD M+  G+ PD     
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR 552

Query: 207 TL 208
           +L
Sbjct: 553 SL 554



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 2/221 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   GL P   +Y+ +I G C    L   ++L  ++    +  N+ 
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI+ FCK+ +MD+A  +F KM++     N VT++ +I+GY    N++ AF +Y++M
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E  + P+  +Y  LI GLC    + +A   F   L+N + + +  +   L+ G+ + GR
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            TE   L+D M   G+  D +  + +    L+    ++ C+
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 107/188 (56%), Gaps = 1/188 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ ++G++PD I Y  +I        + +A+  ++++      PN++T T+LI+  C
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +  A ++  +ML      N  TY+C +D +    +M+ A D++  M + +++ +IV
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 758

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           S++ILI GLCK G ++EA+       ++   PD ++Y+ +I   CK G   +A +L++ M
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 194 LRNGIMPD 201
           L  G+ PD
Sbjct: 819 LYKGLKPD 826



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE ++  AL  + Q+   G  P+ +T+  +I   C    L  A  L +++    + PN
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   +D F  EG M+ A  + S ML+ G  A++V+++ LI G  K+  ++ A D+  
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E+  SP+ +SYS +I  LCK G + +A   ++  L   L PDVV Y I IR     G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A+ +Y +M+R+G+ P+
Sbjct: 842 ESDKALGIYTNMIRSGVQPN 861



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   + + G+  D +TY T++ G+C +  L+ A+++   +  +   P+
Sbjct: 243 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPS 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + +ID   K+  +++A  +  K+ + G   NV  Y+ LID   K++    A  +++
Sbjct: 303 EANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFK 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+Y+ILI  LCKRG++E+AL  F    D  +   V  Y  LI GYCK G
Sbjct: 363 EMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG 422

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L   M++ G+ P     S L
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPL 449



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 69/271 (25%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICG--------------------YCSLN----- 41
           ++  A +L+ Q+ + GL+PD  TY ++I G                    Y  LN     
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 42  ----------RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                     R  E   L++++    +K + ++FTI++ A  K+   + + ++F +M E+
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K + + Y+C+ID   K +NM  A + +++M  +  SPN V++++LI+ LCK G +  A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 152 ---------------LYAFHCALD-------------------NHLLPDVVTYAILIRGY 177
                           + ++C LD                      L  +V++ ILI+G 
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 767

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CKAG+  EA+ L   +  +G  PD +  ST+
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTI 798



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  L  ++   G++   + YN ++ G C   R+ EAV++   +  + +  + +T+ 
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FC+   ++ A  +   M+  G   +    S +ID   K + ++ AF +  ++ + 
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+ LID LCK    ++A   F       L P+ VTYAILI   CK G   +A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 187 MQLYDSMLRNGI 198
           + L+D M   GI
Sbjct: 393 LCLFDKMRDKGI 404



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 36/251 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L + ++L  ++ +RG+  +  T+  +I G+C   ++DEA +LF+K+    + PN
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID---------------- 105
            +TF ++I+ +C  G +  A  ++ +M+E G K +  TY  LI                 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 106 -------------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                              G+F+       + +++EM    +  ++VS++I++    K+ 
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             E++   F    +  + PD + Y  +I    K     +A+  +D M+ +G  P+ +  +
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 207 TLADYNLQSSG 217
            L + NL  SG
Sbjct: 693 VLIN-NLCKSG 702



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  LF ++   G+  D   Y   I  YC    LD A  L  ++    +K +
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +L+   CK  R+ +A  + + M+  G  A+ VTY  L+ G+ + + ++ A  +  
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKA 180
           +M      P+  + S +ID L K+ L+EEA ++  C L D  ++P+V  Y  LI   CK 
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEA-FSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  +A +L+  M   G+ P+ +  + L
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAIL 379



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T + ++ +  K  +   A  +F KML+ G   +   Y+  I  Y +S+N+  A  + 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    +  + V Y++L+ GLCK   ++EA+   +  ++  +  D VTY  L+ G+C+ 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
                A+++   M+R G +P
Sbjct: 282 EELEMALRITHDMIRLGFVP 301


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 108/189 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EP+I+ YN +I GYC+   ++ A+++FE +   +  PN  T+T LI   CK G+++ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++FS+M+E G + NVVTY+ LI G     +++ AF +   M  N + PN  ++S+LID 
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCKR  +EEA       +   +  + V Y  LI G CK G+   A +L   M+  G +PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 202 GLLLSTLAD 210
               S+L D
Sbjct: 387 AHSYSSLID 395



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+ LF ++ + GLEP+++TY  +I G C+   L  A +L   +    L PN
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF++LIDA CK  ++++A +    +++KG K N V Y+ LIDG  K+  + +A ++ +
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRG-----------LMEEALYA---------------- 154
           +M      P+  SYS LIDGLC++            +ME+ + A                
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 155 --------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                   F   +   + PD+VTY + +R YC+ GR  +A  +   M+  G+ P+ +  +
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 207 TL 208
           TL
Sbjct: 497 TL 498



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A    G L  +G++ + + Y ++I G C   ++D A +L +K+      P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +++ LID  C++ ++  AT+M   M+EKG +A+ VTY+ +ID   +    +    +++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I+P+IV+Y++ +   C+ G ME+A       +D  + P++VTY  LIRGY   G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             ++A   ++ M+  G  P+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPN 526



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A ++F  +  RG      TY  ++ G      + EA+ +F  +      P++  +  
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C+ GR ++A ++  + +  G + N+V Y+ LIDGY  +  M+ A  V+E M  N 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+ +Y+ LI GLCK G +E A+  F   ++  L P+VVTY  LI+G C  G    A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  NG++P+    S L D
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLID 325



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 100/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F  +      PD   Y T++ G C   R +EA  L E+      +PN + +  LID
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G M+ A  +F  M       NV TY+ LI G  KS  ++ A  ++  M E  + P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI G C  G ++ A    H    N L+P+  T+++LI   CK  +  EA    
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
            S+++ G+  + ++ ++L D
Sbjct: 341 GSLVKKGVKVNEVVYTSLID 360



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 95/189 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DAA +L  ++   G  PD  +Y+++I G C   +L +A  + E +    ++ +
Sbjct: 362 LCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQAS 421

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI+ID   +E   +    +F KM+  G   ++VTY+  +  Y +   M+ A  +  
Sbjct: 422 PVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIV 481

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ LI G    GL+ +A   F   +     P+  +Y +L+R   K  
Sbjct: 482 QMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKS 541

Query: 182 RPTEAMQLY 190
               ++ ++
Sbjct: 542 SSDNSVDIW 550



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA +    L   GL PD   Y + + GYC    L  A ++F  +        + T+T 
Sbjct: 88  IPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G + +A  +F  M       +   Y+ ++ G  ++   + A  + EE   N 
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG 207

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PNIV Y+ LIDG C  G ME AL  F     N   P+V TY  LI G CK+G+   AM
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  G+ P+ +  + L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTAL 288



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  R    ++ TY T+I  YC    +  A Q    L    L P+S  +T  +  +C+ G 
Sbjct: 63  LASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +  A  +F  M  +G      TY+ L+ G   +  ++ A  V+  M  ++ +P+   Y+ 
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           ++ GLC+ G  EEA      A+ N   P++V Y  LI GYC AG    A+++++ M  N 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 198 IMPD 201
             P+
Sbjct: 243 CSPN 246



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 7/154 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++E   +   K+F ++   G+ PDI+TY   +  YC   R+++A  +  ++    + PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY- 120
            +T+  LI  +   G +  A   F  M+ KG K N  +Y+ L+    K  +  ++ D++ 
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 121 ----EEMCENNISPNIVSYSILIDGLCKRGLMEE 150
               +++ E+N   + + + ILI GL ++G + E
Sbjct: 552 IADMKDLQESNY--DEIVWKILIYGLLQKGSVAE 583



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 1/163 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T LI+A+C  G +  A    + +L  G   +   Y+  + GY ++  +  A  V+
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M          +Y+ L+ GL   G++ EA+  F     +   PD   YA ++ G C+A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           GR  EA  L +  + NG  P+ ++ + L D    ++G  EH +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALID-GYCNAGEMEHAL 232


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 114/203 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++PD++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G   ++V +S +I+   K   +  A ++++      
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y++L+DG C  G ME+AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  ML+ GI P  +L S + D
Sbjct: 593 SLFREMLQRGIKPSTILYSIIID 615



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 116/199 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I ++I
Sbjct: 553 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 612

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A M F +M E G   ++ TY+ ++ G FK++    A  +++E+   N
Sbjct: 613 IIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 672

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++ + +IDG+ +   +EEA   F     + L+P VVTY+I+I    K G   EA 
Sbjct: 673 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 732

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  P+  LL+
Sbjct: 733 DMFSSMQNAGCEPNSRLLN 751



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  +II  N ++ G+C   R DEA+ +      +L CV   P+  +++
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCV---PDVFSYS 189

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     NVV Y+ +IDG+FK  ++  A D+++EM 
Sbjct: 190 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 249

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++V+Y+ ++  LCK   M++A       ++  +LP+  TY  LI GY   G+  
Sbjct: 250 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 309

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R+ I+PD + LS L
Sbjct: 310 EAVRVFKEMRRHSILPDVVTLSML 333



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 119/207 (57%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ PD  T+N +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 375 KGCLVDMT-DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 433

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I A C+ G+MDDA   F++M+++G   +   Y+CLI G+    ++  A ++  E+
Sbjct: 434 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 493

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +S +I+ LCK G + +A   F   ++  L PD V Y +L+ GYC  G+ 
Sbjct: 494 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 553

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ +   TL +
Sbjct: 554 EKALRVFDAMVSAGIEPNVVGYGTLVN 580



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 115/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++ + P+  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T ++L+ + CK G++ +A  +F  M  KG   +V +Y+ +++GY     +    D+++
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P+  ++++LI      G++++A+  F+   D+ + PDVVTY  +I   C+ G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G+ PD
Sbjct: 447 KMDDAMEKFNQMIDQGVAPD 466



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ PD   YN +I G+C+   L +A +L  ++    +  + + F+ 
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G   + V Y+ L+DGY     M+ A  V++ M    
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+V Y  L++G CK G ++E L  F   L   + P  + Y+I+I G  +AGR   A 
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627

Query: 188 QLYDSMLRNGIMPD 201
             +  M  +GI  D
Sbjct: 628 MKFHEMTESGIAMD 641



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 113/210 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ +++II   C L R+ +A  +F+    V L P+++ + +L+D
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + NVV Y  L++GY K   +     ++ EM +  I P
Sbjct: 546 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + YSI+IDGL + G    A   FH   ++ +  D+ TY I++RG  K     EA+ L+
Sbjct: 606 STILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 665

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  + + L+T+ D   Q+   +E
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEE 695



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 97/177 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++ YNT+I G+     +++A  LF+++    + P+ +T+  ++ A CK   MD A   
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ K    N  TY+ LI GY  +   K A  V++EM  ++I P++V+ S+L+  LCK
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI PD
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 396



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + N++  + L++G+ +++    A 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SYSIL+  LC +G   +A        +   +  P+VV Y  +I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G+ K G   +A  L+  M++ GI PD
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPD 256



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 75/151 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ +IIT NT+I G     R++EA  LF  ++  +L P+
Sbjct: 652 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 711

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I    KEG +++A  MFS M   G + N    + ++    K   +  A     
Sbjct: 712 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 771

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           ++ E N S   ++  +L+D    +G   E +
Sbjct: 772 KIDERNFSLEHLTAMLLVDLFSSKGTCREQI 802


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 108/189 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EP+I+ YN +I GYC+   ++ A+++FE +   +  PN  T+T LI   CK G+++ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++FS+M+E G + NVVTY+ LI G     +++ AF +   M  N + PN  ++S+LID 
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCKR  +EEA       +   +  + V Y  LI G CK G+   A +L   M+  G +PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 202 GLLLSTLAD 210
               S+L D
Sbjct: 387 AHSYSSLID 395



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+ LF ++ + GLEP+++TY  +I G C+   L  A +L   +    L PN
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF++LIDA CK  ++++A +    +++KG K N V Y+ LIDG  K+  + +A ++ +
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRG-----------LMEEALYA---------------- 154
           +M      P+  SYS LIDGLC++            +ME+ + A                
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 155 --------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                   F   +   + PD+VTY + +R YC+ GR  +A  +   M+  G+ P+ +  +
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 207 TL 208
           TL
Sbjct: 497 TL 498



 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A    G L  +G++ + + Y ++I G C   ++D A +L +K+      P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +++ LID  C++ ++  AT+M   M+EKG +A+ VTY+ +ID   +    +    +++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I+P+IV+Y++ +   C+ G ME+A       +D  + P++VTY  LIRGY   G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             ++A   ++ M+  G  P+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPN 526



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A ++F  +  RG      TY  ++ G      + EA+ +F  +      P++  +  
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C+ GR ++A ++  + +  G + N+V Y+ LIDGY  +  M+ A  V+E M  N 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+ +Y+ LI GLCK G +E A+  F   ++  L P+VVTY  LI+G C  G    A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  NG++P+    S L D
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLID 325



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 100/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F  +      PD   Y T++ G C   R +EA  L E+      +PN + +  LID
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G M+ A  +F  M       NV TY+ LI G  KS  ++ A  ++  M E  + P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI G C  G ++ A    H    N L+P+  T+++LI   CK  +  EA    
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
            S+++ G+  + ++ ++L D
Sbjct: 341 GSLVKKGVKVNEVVYTSLID 360



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 95/189 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DAA +L  ++   G  PD  +Y+++I G C   +L +A  + E +    ++ +
Sbjct: 362 LCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQAS 421

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI+ID   +E   +    +F KM+  G   ++VTY+  +  Y +   M+ A  +  
Sbjct: 422 PVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIV 481

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ LI G    GL+ +A   F   +     P+  +Y +L+R   K  
Sbjct: 482 QMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKS 541

Query: 182 RPTEAMQLY 190
               ++ ++
Sbjct: 542 SSDNSVDIW 550



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA +    L   GL PD   Y + + GYC    L  A ++F  +        + T+T 
Sbjct: 88  IPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G + +A  +F  M       +   Y+ ++ G  ++   + A  + EE   N 
Sbjct: 148 LLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG 207

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PNIV Y+ LIDG C  G ME AL  F     N   P+V TY  LI G CK+G+   AM
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  G+ P+ +  + L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTAL 288



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 12/211 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++E   +   K+F ++   G+ PDI+TY   +  YC   R+++A  +  ++    + PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY- 120
            +T+  LI  +   G +  A   F  M+ KG K N  +Y+ L+    K  +  ++ D++ 
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 121 -----------EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
                      E++ E  +      YS  I  LC+   +EEA + F    + +L P    
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           Y  +I   C+    T+A+ L DSM ++G +P
Sbjct: 612 YTSIIDCCCRLKILTDALTLLDSMTKSGYLP 642



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            L  R    ++ TY T+I  YC    +  A Q    L    L P+S  +T  +  +C+ G
Sbjct: 62  SLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAG 121

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +  A  +F  M  +G      TY+ L+ G   +  ++ A  V+  M  ++ +P+   Y+
Sbjct: 122 MLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYA 181

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            ++ GLC+ G  EEA      A+ N   P++V Y  LI GYC AG    A+++++ M  N
Sbjct: 182 TMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 197 GIMPD 201
              P+
Sbjct: 242 RCSPN 246



 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 47/244 (19%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++ A  +  Q+ DRG+ P+++TYNT+I GY +L  + +A   FE +     KPN  
Sbjct: 469 EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528

Query: 64  TFTILIDAFCKEGR------------MDDATMMFSKMLEKGPKANVVTYSCLI------- 104
           ++T+L+    K+              M D  ++   + E+        YSC I       
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588

Query: 105 -----DGYF---KSQNMKSAFDVY--------------------EEMCENNISPNIVSYS 136
                  +F   ++ N+  + DVY                    + M ++   P++ SY 
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYR 648

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           I+I  LC+ G    A   F   L      D + + ILI G  + G   E   L   M  +
Sbjct: 649 IIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH 708

Query: 197 GIMP 200
           G  P
Sbjct: 709 GYQP 712



 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 1/163 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T LI+A+C  G +  A    + +L  G   +   Y+  + GY ++  +  A  V+
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M          +Y+ L+ GL   G++ EA+  F     +   PD   YA ++ G C+A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           GR  EA  L +  + NG  P+ ++ + L D    ++G  EH +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALID-GYCNAGEMEHAL 232


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  Q+ D G+ P+ +TY ++I GY +L R +EA ++F ++T   L P+
Sbjct: 161 LCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPD 220

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++   +D+ CK GR  +A  +F  M  KG + N+VTY  L+ GY            + 
Sbjct: 221 IVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFN 280

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I  N + ++ILID   KRG+M+EA+          L PDV TY+ LI   C+ G
Sbjct: 281 TMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMG 340

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A+  ++ M+  G+ P+ ++  +L
Sbjct: 341 RLADAVDKFNQMIGTGVQPNTVVYHSL 367



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 102/192 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + A K+F ++T RGL PDI+++N+ +   C   R  EA ++F  +     +PN +T+ 
Sbjct: 201 RWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYG 260

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+  +  EG   D    F+ M   G  AN + ++ LID Y K   M  A  +  EM   
Sbjct: 261 ILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQ 320

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++ +YS LI  LC+ G + +A+  F+  +   + P+ V Y  LI+G+C  G   +A
Sbjct: 321 GLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKA 380

Query: 187 MQLYDSMLRNGI 198
            +L   M+ NGI
Sbjct: 381 KELVYEMMNNGI 392



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 103/187 (55%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            PD++TYNT+I G+    ++ +A  L+ ++      P+ +T   +I+A CK   +D+A +
Sbjct: 113 SPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAEL 172

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M++ G   N VTY+ +I GY      + A  ++ EM    + P+IVS++  +D LC
Sbjct: 173 LLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLC 232

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  +EA   F+        P++VTY IL+ GY   G   + M  +++M  +GI+ + L
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL 292

Query: 204 LLSTLAD 210
           + + L D
Sbjct: 293 VFTILID 299



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTILI 69
            L  FG+L   GL+ D    NT++   C   R D+AV+ L  ++T +   P++ ++ I++
Sbjct: 27  GLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVL 86

Query: 70  DAFCKEGRMDDATMMFSKML-EKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
              C + R   A  +   M  E+G    +VVTY+ +I G+FK   +  A ++Y EM +  
Sbjct: 87  KRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQG 146

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+++ +I+ LCK   ++ A       +DN + P+ VTY  +I GY   GR  EA 
Sbjct: 147 FVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEAT 206

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +++  M   G++PD +  ++  D   +   S+E
Sbjct: 207 KMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKE 239



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 105/200 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A  +   +   G+ PD  TYNT++ GY    R+D+ + LF +++  ++KP ++T+ 
Sbjct: 447 EMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYN 506

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++D   + GR   A  M  +M+  G   ++ TY+ ++ G  ++     A  +++++C  
Sbjct: 507 IILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTM 566

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  NI + + +I+ +      EEA   F    D+ L+P+  TY I+IR   K G   EA
Sbjct: 567 NVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEA 626

Query: 187 MQLYDSMLRNGIMPDGLLLS 206
             ++ SM ++G  P   LL+
Sbjct: 627 DNMFSSMEKSGCAPCSRLLN 646



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ +  ++  +GL PD+ TY+T+I   C + RL +AV  F ++    ++PN++
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTV 362

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +  LI  FC  G +  A  +  +M+  G P+ N+  ++ ++    K   +  A  +++ 
Sbjct: 363 VYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDL 422

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + +     +I+ ++ LIDG C  G M +A       +   + PD  TY  L+ GY K+GR
Sbjct: 423 VKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGR 482

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             + + L+  M    I P  +  + + D
Sbjct: 483 IDDGLNLFREMSDKKIKPTTVTYNIILD 510



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 1/187 (0%)

Query: 8   LDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           L  A +L  ++ + G+  P+I  +N+I+   C   R+ +A  +F+ +  +  + + I F 
Sbjct: 377 LVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFN 436

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +C  G M  A  +   M+  G   +  TY+ L++GYFKS  +    +++ EM + 
Sbjct: 437 TLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P  V+Y+I++DGL + G    A    H  +       + TY I+++G C+     EA
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556

Query: 187 MQLYDSM 193
           + ++  +
Sbjct: 557 IVMFQKL 563


>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
          Length = 630

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 119/216 (55%), Gaps = 1/216 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ A K+  ++  +GL P    ++ +I G+C    +D A+ ++E +   ++KPN
Sbjct: 311 LVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPN 370

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ +ID F + GRM +A  +F +M++     N+VTYS ++ GYF   N   A   +E
Sbjct: 371 VVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWE 430

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    P  +SYSILI GLC  G +++A+  +   +     PD + Y  +++G C +G
Sbjct: 431 EMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSG 490

Query: 182 RPTEAMQLYDSMLRNG-IMPDGLLLSTLADYNLQSS 216
                ++L++ ML  G   PD +  + L D  ++++
Sbjct: 491 MVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTN 526



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 9/214 (4%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA+ +  ++ + G+ P ++TY  ++ G     R+++A ++ +++    L P+   F+ +I
Sbjct: 284 AAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVI 343

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FCK G +D A M++  M+    K NVV YS +IDG+ +S  M  A  ++EEM +    
Sbjct: 344 TGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCI 403

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PNIV+YS ++ G         AL  +   +    +P  ++Y+ILI G C  GR  +AM +
Sbjct: 404 PNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMV 463

Query: 190 YDSMLRNGIMPD---------GLLLSTLADYNLQ 214
           + +M+  G  PD         GL +S + D  L+
Sbjct: 464 WKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLR 497



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++   ++ A+KLF  +  +G     +TYN ++ G         A+ +  ++    + P 
Sbjct: 241 MLRAGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPG 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D   K GR++DA  +  +M  +G   +   +S +I G+ KS  +  A  V+E
Sbjct: 301 LMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWE 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN+V YS +IDG  + G M EA   F   +D   +P++VTY+ ++RGY    
Sbjct: 361 TMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIA 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + A+  ++ M++ G +P  +  S L
Sbjct: 421 NSSRALSTWEEMIKVGCVPTAISYSIL 447



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 93/175 (53%), Gaps = 1/175 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  A KLF ++ D    P+I+TY++++ GY  +     A+  +E++  V   P +I
Sbjct: 383 RSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAI 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +++ILI   C  GR+ DA M++  M+ +G   + + Y+ ++ G   S  +     ++ +M
Sbjct: 443 SYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDM 502

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             + +  P+++SY++L+D L +   +  A+   +  LD    PD +T  I +R +
Sbjct: 503 LAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREF 557



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 1/188 (0%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L PD  TY+T++        ++EAV L  ++  V    ++  F  ++ A  + G ++ A 
Sbjct: 193 LVPDKFTYSTVVSALADAGCVEEAVALVHEMV-VDGVVSAEAFNPVLKAMLRAGDVNGAV 251

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +F  M  KG     VTY+ L+ G       ++A ++   M    I P +++Y  ++DGL
Sbjct: 252 KLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGL 311

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            K G +E+A           L P    ++ +I G+CK+G    A+ ++++M+   + P+ 
Sbjct: 312 VKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNV 371

Query: 203 LLLSTLAD 210
           +L S + D
Sbjct: 372 VLYSAMID 379



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 92/180 (51%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            +N ++        ++ AV+LF  +        ++T+ +L+      G    A  +  +M
Sbjct: 233 AFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRM 292

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G    ++TY  ++DG  K   ++ A+ V +EM    ++P+   +S +I G CK G +
Sbjct: 293 ENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEV 352

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + AL  +   +   + P+VV Y+ +I G+ ++GR TEA +L++ M+    +P+ +  S++
Sbjct: 353 DRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSM 412



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 19/191 (9%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  + ++   G  P  I+Y+ +I G C + RL +A+ +++ +      P++I +T ++ 
Sbjct: 425 ALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMK 484

Query: 71  AFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             C  G +D    +F+ ML KG  K +V++Y+ L+D   ++ ++  A D+  +M +    
Sbjct: 485 GLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCD 544

Query: 130 PNIVSYSI------------------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           P+ ++ +I                  L+  LC R     A       L  +++P+   + 
Sbjct: 545 PDTITCNIFLREFGVLEGKGREFLEGLVMRLCYRDRYRAAGDVVMVMLAKYIVPEAGIWY 604

Query: 172 ILIRGYCKAGR 182
            ++RG C+  R
Sbjct: 605 TIVRGVCQTKR 615


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A +LF ++  RGLEP+ +TY  +I   C    +++A+ LF+K+    +K  
Sbjct: 371 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 430

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LI+ +CK+G +D A  + S M+++G      +YS LI G  ++ ++ S  +++ 
Sbjct: 431 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I+ N  +++ LI+G CK   M+EA   F   +D++++P+ VT+ ++I GYC  G
Sbjct: 491 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 550

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A QLYD M+  G+ PD     +L
Sbjct: 551 NIRKAFQLYDQMVEMGLKPDNYTYRSL 577



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 2/221 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   GL P   +Y+ +I G C    L   ++L  ++    +  N+ 
Sbjct: 443 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 502

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI+ FCK+ +MD+A  +F KM++     N VT++ +I+GY    N++ AF +Y++M
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 562

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E  + P+  +Y  LI GLC    + +A   F   L+N + + +  +   L+ G+ + GR
Sbjct: 563 VEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGFFREGR 621

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            TE   L+D M   G+  D +  + +    L+    ++ C+
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 662



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 107/188 (56%), Gaps = 1/188 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ ++G++PD I Y  +I        + +A+  ++++      PN++T T+LI+  C
Sbjct: 663 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 722

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +  A ++  +ML      N  TY+C +D +    +M+ A D++  M + +++ +IV
Sbjct: 723 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 781

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           S++ILI GLCK G ++EA+       ++   PD ++Y+ +I   CK G   +A +L++ M
Sbjct: 782 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 841

Query: 194 LRNGIMPD 201
           L  G+ PD
Sbjct: 842 LYKGLKPD 849



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE ++  AL  + Q+   G  P+ +T+  +I   C    L  A  L +++    + PN
Sbjct: 686 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 745

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   +D F  EG M+ A  + S ML+ G  A++V+++ LI G  K+  ++ A D+  
Sbjct: 746 KFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMS 804

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E+  SP+ +SYS +I  LCK G + +A   ++  L   L PDVV Y I IR     G
Sbjct: 805 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 864

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A+ +Y +M+R+G+ P+
Sbjct: 865 ESDKALGIYTNMIRSGVQPN 884



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   + + G+  D +TY T++ G+C +  L+ A+++   +  +   P+
Sbjct: 266 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPS 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + +ID   K+  +++A  +  K+ + G   NV  Y+ LID   K++    A  +++
Sbjct: 326 EANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFK 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+Y+ILI  LCKRG++E+AL  F    D  +   V  Y  LI GYCK G
Sbjct: 386 EMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG 445

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L   M++ G+ P     S L
Sbjct: 446 SLDRARGLLSGMVKEGLTPTAASYSPL 472



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 69/271 (25%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICG--------------------YCSLN----- 41
           ++  A +L+ Q+ + GL+PD  TY ++I G                    Y  LN     
Sbjct: 551 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 610

Query: 42  ----------RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                     R  E   L++++    +K + ++FTI++ A  K+   + + ++F +M E+
Sbjct: 611 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 670

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K + + Y+C+ID   K +NM  A + +++M  +  SPN V++++LI+ LCK G +  A
Sbjct: 671 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 730

Query: 152 ---------------LYAFHCALD-------------------NHLLPDVVTYAILIRGY 177
                           + ++C LD                      L  +V++ ILI+G 
Sbjct: 731 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 790

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CKAG+  EA+ L   +  +G  PD +  ST+
Sbjct: 791 CKAGKIQEAIDLMSKITESGFSPDCISYSTI 821



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  L  ++   G++   + YN ++ G C   R+ EAV++   +  + +  + +T+ 
Sbjct: 236 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 295

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FC+   ++ A  +   M+  G   +    S +ID   K + ++ AF +  ++ + 
Sbjct: 296 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 355

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+ LID LCK    ++A   F       L P+ VTYAILI   CK G   +A
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415

Query: 187 MQLYDSMLRNGI 198
           + L+D M   GI
Sbjct: 416 LCLFDKMRDKGI 427



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 36/251 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L + ++L  ++ +RG+  +  T+  +I G+C   ++DEA +LF+K+    + PN
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID---------------- 105
            +TF ++I+ +C  G +  A  ++ +M+E G K +  TY  LI                 
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595

Query: 106 -------------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                              G+F+       + +++EM    +  ++VS++I++    K+ 
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             E++   F    +  + PD + Y  +I    K     +A+  +D M+ +G  P+ +  +
Sbjct: 656 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 715

Query: 207 TLADYNLQSSG 217
            L + NL  SG
Sbjct: 716 VLIN-NLCKSG 725



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  LF ++   G+  D   Y   I  YC    LD A  L  ++    +K +
Sbjct: 196 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 255

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +L+   CK  R+ +A  + + M+  G  A+ VTY  L+ G+ + + ++ A  +  
Sbjct: 256 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 315

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKA 180
           +M      P+  + S +ID L K+ L+EEA ++  C L D  ++P+V  Y  LI   CK 
Sbjct: 316 DMIRLGFVPSEANCSFMIDELRKKELVEEA-FSLACKLGDLGMVPNVFAYNALIDKLCKN 374

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  +A +L+  M   G+ P+ +  + L
Sbjct: 375 ERFDDADRLFKEMAGRGLEPNEVTYAIL 402



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T + ++ +  K  +   A  +F KML+ G   +   Y+  I  Y +S+N+  A  + 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    +  + V Y++L+ GLCK   ++EA+   +  ++  +  D VTY  L+ G+C+ 
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
                A+++   M+R G +P
Sbjct: 305 EELEMALRITHDMIRLGFVP 324


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 119/212 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L AA+  F ++ D+GL+P +++Y ++I GYC+  +L EA +L+ ++T   + PN+ TFT
Sbjct: 451 NLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFT 510

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI A  +  RM DA  +F +MLE+    N VTY+ +I+G+ K  N   AF++  +M + 
Sbjct: 511 TLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK 570

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+  +Y  LI  LC  G + EA          H   + + Y+ L+ GYCK GR  +A
Sbjct: 571 GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDA 630

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           + +   M++ G+  D +  + L D  ++   +
Sbjct: 631 LGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662



 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 104/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G  P +  YN +I   C   + DEA  LF+++    L  N +T++ILID
Sbjct: 350 AFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           +FC+ G++D A     KM+  G K  V  Y+ LI+G+ K  N+ +A   ++EM +  + P
Sbjct: 410 SFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKP 469

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +VSY+ LI G C +G + EA   +H      + P+  T+  LI    +A R T+A +L+
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529

Query: 191 DSMLRNGIMPD 201
           D ML   +MP+
Sbjct: 530 DEMLEQNMMPN 540



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D A  LF ++ ++GL  + +TY+ +I  +C   +LD A+    K+    +K  
Sbjct: 376 LCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKIT 435

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LI+  CK G +  A   F +M++KG K  VV+Y+ LI GY     +  AF +Y 
Sbjct: 436 VYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYH 495

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I+PN  +++ LI  L +   M +A   F   L+ +++P+ VTY ++I G+CK G
Sbjct: 496 EMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEG 555

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A +L + M++ G++PD
Sbjct: 556 NTVKAFELLNQMVQKGLVPD 575



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 105/188 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+   G++   G++  +  YN++I G+C L  L  AV  F+++    LKP  +++T 
Sbjct: 417 LDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTS 476

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C +G++ +A  ++ +M  KG   N  T++ LI   F++  M  AF +++EM E N
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V+Y+++I+G CK G   +A    +  +   L+PD  TY  LI   C  GR  EA 
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596

Query: 188 QLYDSMLR 195
           +  D + R
Sbjct: 597 KFIDDLHR 604



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 1/201 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE    A   L   + D+ L PD + Y ++I GY     + +A  +++ +      PN 
Sbjct: 657 IKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNI 716

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T LI+  CK G MD A +++ +ML      N VTY C +D   +  +M+ A  ++ +
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHND 776

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  ++ N VSY+IL+ G CK G +EEA       +DN + PD +TY+ +I   C+ G 
Sbjct: 777 MLKGLLA-NTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGN 835

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
              A++ +D+ML  G+ PD L
Sbjct: 836 LDGAIEFWDTMLNKGLKPDTL 856



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 69/274 (25%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   A +L  Q+  +GL PD  TY  +I   CS  R+ EA +  + L     K N +
Sbjct: 553 KEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGP------------------------------ 93
            ++ L+  +CKEGR+ DA  +  +M+++G                               
Sbjct: 613 CYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672

Query: 94  -----KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                + + V Y+ +IDGY K+ ++K AF +++ M +   +PNIV+Y+ LI+ LCK GLM
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732

Query: 149 EEAL--------------YAFHCALDNH--------------------LLPDVVTYAILI 174
           ++A               +  +C   +H                    LL + V+Y IL+
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILV 792

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           RG+CK GR  EA +L D M+ N I PD +  ST+
Sbjct: 793 RGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTI 826



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 109/198 (55%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  ++  + D G  P+I+TY T+I   C    +D+A  L++++      PN +
Sbjct: 693 KAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   +D   +EG M+ A  + + ML KG  AN V+Y+ L+ G+ K   ++ A  + +EM
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N I P+ ++YS +I   C+RG ++ A+  +   L+  L PD + Y  LI G C AG  
Sbjct: 812 IDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L D M+R G+ P+
Sbjct: 872 GKAFELRDDMIRRGVKPN 889



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 100/192 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G  P     ++++ G     ++ +A  L  ++  V   P+   +  LI++ CK+G
Sbjct: 321 EMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDG 380

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           + D+A ++F +M EKG  AN VTYS LID + +   + +A     +M    I   +  Y+
Sbjct: 381 KFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYN 440

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI+G CK G +  A+  F   +D  L P VV+Y  LI GYC  G+  EA +LY  M   
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500

Query: 197 GIMPDGLLLSTL 208
           GI P+    +TL
Sbjct: 501 GIAPNTYTFTTL 512



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D  L LFG++   G+ PDI  Y  +I  +C L    +A ++ +++    L  N
Sbjct: 203 LAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--N 260

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LI   CK  R+ +A  + + +++KG  A+ VTY  L+ G  K Q  +    V +
Sbjct: 261 VVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMD 320

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P   + S L++GL ++G + +A    +       +P +  Y  LI   CK G
Sbjct: 321 EMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDG 380

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L+  M   G+  + +  S L D
Sbjct: 381 KFDEAELLFKEMGEKGLCANDVTYSILID 409



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A++L   +  +GL  + ++YN ++ G+C L R++EA +L +++    + P+
Sbjct: 761 LAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPD 819

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ +I   C+ G +D A   +  ML KG K + + Y+ LI G   +  +  AF++ +
Sbjct: 820 CITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRD 879

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +M    + PN  ++  L  G  ++
Sbjct: 880 DMIRRGVKPNQATHKSLSHGASRK 903



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 2/183 (1%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++ +I  Y    R+ ++V +F  +   +L P   T   +++   K  R+D   ++F +
Sbjct: 159 LGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGE 218

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           +L  G + ++  Y  +I  + + +N   A ++ + M  +++  N+V Y++LI GLCK   
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKR 276

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EA+   +  +   L    VTY  L+ G CK         + D M+  G +P    LS+
Sbjct: 277 VWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSS 336

Query: 208 LAD 210
           L +
Sbjct: 337 LVE 339


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT+I GY  L  LD+  +L   +    + P+  
Sbjct: 148 KEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T+LI+  CKE +MD+A  +F++ML+KG   N VT++ LIDG+ KS  +  A ++Y++M
Sbjct: 208 TNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP++++Y+ LI GLC++G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L   M+   I  D +  + L
Sbjct: 328 ETAFELRKRMIEESIRLDDVAYTAL 352



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 108/194 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G+ PD+ T   +I G C  +++DEA +LF ++    L PN +TFT 
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +G   +++TY+ LI G  +  ++K A D+  EM    
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E A       ++  +  D V Y  LI G C+ GR  +A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAE 366

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ P+
Sbjct: 367 KMLREMLSVGLKPE 380



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 116/199 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D+GL P+ +T+ T+I G+C   R+D A+++++++      P+
Sbjct: 216 LCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   C++G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF++ +
Sbjct: 276 LITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E +I  + V+Y+ LI GLC+ G   +A       L   L P+  TY ++I G+CK G
Sbjct: 336 RMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A +L   M R+G +P
Sbjct: 396 DVKTASKLLKEMQRDGHVP 414



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 91/150 (60%), Gaps = 1/150 (0%)

Query: 60  PNSITF-TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           P S+ F  IL+  FCKEG +  A  +F  + + G + +VV+++ LI+GY +  ++   F 
Sbjct: 133 PTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFR 192

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +   M  + + P++ + ++LI+GLCK   M+EA   F+  LD  L+P+ VT+  LI G+C
Sbjct: 193 LKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHC 252

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           K+GR   A+++Y  MLR G  PD +  +TL
Sbjct: 253 KSGRVDLALEIYKQMLRQGYSPDLITYNTL 282



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 104/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  LI+ + + G +D    + + M   G   +V T + LI+G  K   M  A +++ 
Sbjct: 171 VVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFN 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN V+++ LIDG CK G ++ AL  +   L     PD++TY  LI G C+ G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L   M   G+ PD +  +TL D
Sbjct: 291 DLKQARDLIVEMSMKGLKPDKITYTTLID 319



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 75/133 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +L +++    ++ +
Sbjct: 286 LCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K    TY+ +I+G+ K  ++K+A  + +
Sbjct: 346 DVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMQRDGHVPCVVT 418



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 2/210 (0%)

Query: 9   DAALKLFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D+A  +F  +  T      DI  ++ +I  Y     L +A++ F      +      T  
Sbjct: 46  DSASAVFAAILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCR 105

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++   K          + ++LE G   ++  ++ L+  + K   ++ A  V++ + + 
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKC 165

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++VS++ LI+G  + G +++          + + PDV T  +LI G CK  +  EA
Sbjct: 166 GLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEA 225

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            +L++ ML  G++P+G+  +TL D + +S 
Sbjct: 226 NELFNEMLDKGLVPNGVTFTTLIDGHCKSG 255


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKP 60
           L K+  +  A +L  ++  RG +P++ T+ T+I G C     ++A +LF KL      KP
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T +I+ +CKE +++ A M+ S+M E+G   N  TY+ LIDG+ K  N   A+++ 
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +   SPNI +Y+ +IDGLCK+G ++EA    +    + L  D VTY IL+  +C+ 
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQ 483

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                ++  ++ ML+ G  PD
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPD 504



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F ++  RG+ PD +++  ++   C++ R+ EA +    +       ++ T T+
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTL 264

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +IDAFC++G ++     F KM+E G   NV+ ++ LI+G  K  ++K AF++ EEM    
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             PN+ +++ LIDGLCK+G  E+A   F      +   P+V TY  +I GYCK  +   A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M   G++P+    +TL D
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLID 408



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 106/199 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G  P+I TYN II G C    LDEA +L  K++   L+ + +T+TIL+ 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++   + + + F+KML+ G   ++ +Y+ LI  + + + MK +  ++EE     + P
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIP 538

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ +I G C+ G    A+  F    ++   PD +TY  LI G CK  +  +A  LY
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 191 DSMLRNGIMPDGLLLSTLA 209
           D+M+  G+ P  +   TLA
Sbjct: 599 DAMMDKGLSPCEVTRLTLA 617



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  L  ++ ++GL P+  TY T+I G+C +     A +L + +      PN  
Sbjct: 377 KEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY 436

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID  CK+G +D+A  + +K+   G +A+ VTY+ L+  + +  +   +   + +M
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +   +P+I SY+ LI   C++  M+E+   F  A+   L+P   TY  +I GYC+ G  
Sbjct: 497 LKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A++L+  M  +G  PD +    L
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGAL 581



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A +L  +++  GL+ D +TY  ++  +C     + ++  F K+  V   P+
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPD 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++T LI  FC++ +M ++  +F + +  G      TY+ +I GY +  N   A  +++
Sbjct: 505 IHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +  +P+ ++Y  LI GLCK   +++A   +   +D  L P  VT   L   YCK  
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 182 RPTEAMQLYDSM 193
             + A+ + D +
Sbjct: 625 DSSTAINVLDRL 636



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +  ++ ++GL     T N ++     +  ++ A  +F ++    + P+ ++F +
Sbjct: 170 LKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKL 229

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++ A C  GR+ +A    + M+E+G   +  T + +ID + +   +      + +M E  
Sbjct: 230 MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN+++++ LI+GLCK+G +++A       +     P+V T+  LI G CK G   +A 
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAF 349

Query: 188 QLYDSMLR-NGIMPD 201
           +L+  ++R +G  P+
Sbjct: 350 RLFLKLVRSDGYKPN 364



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  + +LF +    GL P   TY ++ICGYC       AV+LF++++     P+SI
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CKE ++DDA  ++  M++KG     VT   L   Y K  +  +A +V + +
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
            +      I + + L+  LC  G ++ A   FH  LD    P+V    +L
Sbjct: 637 EKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDKE--PNVNRVTLL 681



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 35/174 (20%)

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           F + G++ +A  M  +M  +G   +  T +C++D       ++ A +++ EMC+  +SP+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 132 IVSY-----------------------------------SILIDGLCKRGLMEEALYAFH 156
            VS+                                   +++ID  C++G +   +  F 
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             ++  L P+V+ +  LI G CK G   +A +L + M+R G  P+    +TL D
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 32/147 (21%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT------ 64
           A+KLF ++++ G  PD ITY  +I G C  ++LD+A  L++ +    L P  +T      
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618

Query: 65  --------------------------FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
                                        L+   C EG++D A + F K+L+K P  N V
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRV 678

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T    ++  ++S       ++ E +CE
Sbjct: 679 TLLGFMNKCYESNKYGLVSELSERICE 705



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 1/117 (0%)

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
           +AN V   C++  + ++  +K A ++  EM    +  +  + + ++D     GL+E A  
Sbjct: 152 RANEVM-QCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAEN 210

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            F       + PD V++ +++   C  GR  EA +  ++M+  G + D    + + D
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267


>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
 gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
          Length = 478

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 4/207 (1%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            H++ AL+LF  +     +PD+ +YNTII G C   RL EA+ +F ++    + P  +T+
Sbjct: 180 AHIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTY 235

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I    +EG  DDA  +F +M  +G   N+VTYS LIDG  K     SA ++ + M +
Sbjct: 236 TTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVK 295

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               PN ++YS +IDGLCK  ++ EA+            PD   +  LI G C AGR  E
Sbjct: 296 EKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVE 355

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYN 212
           A    D M+  GI P+ +  S  A  N
Sbjct: 356 AANYLDEMVLAGIEPNRVTWSLHARIN 382



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++  +CS     +++A++LF  +     K
Sbjct: 139 LVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIP----K 194

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+  ++  +ID  C+ GR+ +A  MFS+M+ K     VVTY+ +I    +      A  +
Sbjct: 195 PDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKI 254

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + EM    +SPN+V+YS LIDGLCK G    AL      +    LP+ +TY+ +I G CK
Sbjct: 255 FHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCK 314

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +EAM++ D M   G  PD  L   L
Sbjct: 315 EHMLSEAMEVLDRMRLQGRKPDAGLFGKL 343



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 17/239 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL +F ++  + + P ++TY T+I         D+A+++F ++    + PN
Sbjct: 207 LCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPN 266

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK GR   A  +  +M+++    N +TYS +IDG  K   +  A +V +
Sbjct: 267 LVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLD 326

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR------ 175
            M      P+   +  LI GLC  G   EA       +   + P+ VT+++  R      
Sbjct: 327 RMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVL 386

Query: 176 -GYCKAGRPTEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSSGS------QEHCI 223
              C  G    A Q+Y S     I  D     LL+ + +  N++ +         E CI
Sbjct: 387 TALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKNNIEKAARVVLDMLSERCI 445


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 112/195 (57%), Gaps = 1/195 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITFT 66
           +  A ++  ++  +G +P++ T+  +I G C     ++A +LF KL      KPN  T+T
Sbjct: 314 IKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYT 373

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+ +CKE +++ A M+  +M E+G   N  TY+CLIDG+ K+ N   A+++ + M + 
Sbjct: 374 CMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKE 433

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +PNI +Y+ +IDGLCK+G   EA       L + L  D VTY ILI  +C+     +A
Sbjct: 434 GFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQA 493

Query: 187 MQLYDSMLRNGIMPD 201
           + ++  M + G+ PD
Sbjct: 494 LAIFSRMFKVGLQPD 508



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 110/204 (53%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F ++ DR + PD  +Y  ++ GYC + R+ +  +  + +       ++ T T+
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  F ++G ++ A   F K ++ G   N++ +S LI+G  K  ++K AF++ EEM    
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             PN+ +++ LIDGLCK+G  E+A   F      ++  P+V TY  +I GYCK  +   A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M   G++P+    + L D
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLID 412



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 106/206 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +   A +L   +   G  P+I TYN II G C   R  EA +L  +     L  + +
Sbjct: 416 KAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKV 475

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI  FC++     A  +FS+M + G + ++ TY+ LI  + + + ++ +  ++EE 
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEA 535

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P   +Y+ +I G C+ G +  A+  FH   D    PD +TY  LI G C   + 
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA QLY++M+ NG+ P  +   TLA
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLA 621



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 108/219 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  L  ++ ++GL P+  TY  +I G+C       A +L + +      PN  
Sbjct: 381 KEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIF 440

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID  CK+GR  +A  +  + L+ G  A+ VTY+ LI  + +  + K A  ++  M
Sbjct: 441 TYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRM 500

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++ +Y++LI   C++  +EE+   F  A+   LLP   TY  +I GYC+ G  
Sbjct: 501 FKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHI 560

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + A++ +  M   G  PD +    L       S   E C
Sbjct: 561 SSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEAC 599



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+   + A +LF +L      +P++ TY  +I GYC   +L+ A  L  ++    L P
Sbjct: 343 LCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVP 402

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+T LID  CK G    A  +   M ++G   N+ TY+ +IDG  K      A+ + 
Sbjct: 403 NTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLL 462

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
               ++ +  + V+Y+ILI   C++   ++AL  F       L PD+ TY +LI  +C+ 
Sbjct: 463 RRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQ 522

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            +  E+ +L++  +  G++P
Sbjct: 523 KKVEESEKLFEEAVGLGLLP 542



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 96/192 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A KL  +    GL  D +TY  +I  +C      +A+ +F ++  V L+P+
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LI  FC++ +++++  +F + +  G      TY+ +I GY +  ++ SA   + 
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+ ++Y  LI GLC    ++EA   +   +DN L P  VT   L   YCK G
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG 628

Query: 182 RPTEAMQLYDSM 193
               AM + + +
Sbjct: 629 DSATAMIILERL 640



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 100/189 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +  ++ + GL       N +I    +L  +D A ++F+++    + P+S ++ +
Sbjct: 174 LKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKL 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  +C+ GR+ D       M+E+G   +  T + +I  + +   +  AF  +++  +  
Sbjct: 234 MVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMG 293

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN++++S LI+GLCK G +++A       +     P+V T+  LI G CK G   +A 
Sbjct: 294 LNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAF 353

Query: 188 QLYDSMLRN 196
           +L+  ++R+
Sbjct: 354 RLFLKLVRS 362



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 32/193 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F ++   GL+PD+ TYN +I  +C   +++E+ +LFE+   + L P   T+T +I 
Sbjct: 493 ALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMIC 552

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C++G +  A   F KM + G K + +TY  LI G      +  A  +YE M +N +SP
Sbjct: 553 GYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP 612

Query: 131 NIVSYSILIDGLCKRG----------LMEEALYA----------------------FHCA 158
             V+   L    CK+G           +E+ L+                       FH  
Sbjct: 613 CEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKL 672

Query: 159 LDNHLLPDVVTYA 171
           LD  L  D +T A
Sbjct: 673 LDKDLNVDRITLA 685



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 83/178 (46%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++  +  + +L EAV +  ++    L   +     +ID     G +D A  +F +ML++ 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              +  +Y  ++ GY +   +       ++M E   + +  + +++I    ++G +  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + F   +   L P+++ ++ LI G CK G   +A ++ + M+R G  P+    + L D
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
           C++  + +   +K A ++  EM  + +       + +ID     G ++ A   F   LD 
Sbjct: 163 CMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG----LLLSTLAD 210
            ++PD  +Y +++ GYC+ GR ++  +    M+  G   D     L++ST ++
Sbjct: 223 AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSE 275


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE +++ A ++  +  + GL P  + +NTI+ GYC +  +++A    EK+  V L+PN
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+  FC+   M++A     KM+EKG   NV TY+ LIDGY +S      F + E
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN++SY  LI+ LCK   + EA       +   ++P+   Y +LI G C AG
Sbjct: 487 EMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAG 546

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  +A + +D M+   I+P      TL  YN+  +G
Sbjct: 547 KLKDAFRFFDEMVAREIVP------TLVTYNILING 576



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 112/194 (57%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A K   ++ ++G+ P++ TYNT+I GY      D   Q+ E++    LKPN I++ 
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYG 501

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK+  + +A ++   M+ +G   N   Y+ LIDG   +  +K AF  ++EM   
Sbjct: 502 CLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAR 561

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P +V+Y+ILI+GLCK+G + EA           L  DV+TY  LI GY  AG   +A
Sbjct: 562 EIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKA 621

Query: 187 MQLYDSMLRNGIMP 200
           ++LY++M ++GI P
Sbjct: 622 LELYETMKKSGIKP 635



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 6/200 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---L 58
           L+     +  L+LF ++ + GL PD   Y   I     L  L  A++L   +TC++   +
Sbjct: 157 LVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL---MTCMKRGGV 213

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            P    + ++I   CKE RM DA  +F +ML++    N +TY+ LIDGY K   ++ AF+
Sbjct: 214 SPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFN 273

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + E M   N+ P I++++ L++GLC+  +MEEA            +PD  TY  L  G+ 
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333

Query: 179 KAGRPTEAMQLYDSMLRNGI 198
           K G    ++ L +  +R G+
Sbjct: 334 KCGNVDASITLSEEAVRKGV 353



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 117/224 (52%), Gaps = 2/224 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A KLF ++ DR + P+ ITYNT+I GYC + +L+EA  + E++    ++P 
Sbjct: 227 LCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPT 286

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  L++  C+   M++A  +  +M   G   +  TY+ L DG+ K  N+ ++  + E
Sbjct: 287 IITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSE 346

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E     +     + SIL++ LCK G ME+A       L+N L P  V +  ++ GYC+ G
Sbjct: 347 EAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVG 406

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY--NLQSSGSQEHCI 223
              +A    + M   G+ P+ +  ++L      +++    E CI
Sbjct: 407 DINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI 450



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++  A  + G +  RG+ P+   YN +I G C   +L +A + F+++   ++ P 
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILI+  CK+G++ +A  + S++  KG   +V+TY+ LI GY  + N++ A ++YE
Sbjct: 567 LVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYE 626

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL-MEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            M ++ I P + +Y  LI G  K GL + E +Y     L  +L+PD V Y  LI  Y + 
Sbjct: 627 TMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIY--QEMLQMNLVPDRVIYNALIHCYVEH 684

Query: 181 GRPTEAMQLYDSMLRNGIMPDGL 203
           G   +A  L+ +M   GI PD +
Sbjct: 685 GDVQKACSLHSAMEAQGIQPDKM 707



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 104/207 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  + +L+  +   G+ P + + N  +    S  R ++ +QLF ++    L+P+   +  
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I A  K G +  A  + + M   G    V  Y+ +I G  K + MK A  +++EM +  
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN ++Y+ LIDG CK G +EEA          ++ P ++T+  L+ G C+A    EA 
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQ 307

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           ++ + M   G +PD    +TL D +L+
Sbjct: 308 RVLEEMEVYGFVPDRFTYTTLFDGHLK 334



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 35/230 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A  +  ++    +EP IIT+N+++ G C    ++EA ++ E++      P+  T+T
Sbjct: 267 QLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYT 326

Query: 67  -----------------------------------ILIDAFCKEGRMDDATMMFSKMLEK 91
                                              IL++A CKEG M+ A  +  K LE 
Sbjct: 327 TLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLEN 386

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G     V ++ +++GY +  ++  A+   E+M    + PN V+Y+ L+   C+   MEEA
Sbjct: 387 GLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEA 446

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                  ++  +LP+V TY  LI GY ++       Q+ + M + G+ P+
Sbjct: 447 EKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 100/204 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++DA++ L  +   +G++    T + ++   C    +++A ++ +K     L P  + F 
Sbjct: 337 NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++ +C+ G ++ A     KM   G + N VTY+ L+  + + +NM+ A    ++M E 
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK 456

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+ LIDG  +  L +             L P+V++Y  LI   CK     EA
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +   M+  G++P+  + + L D
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLID 540



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 1/180 (0%)

Query: 30  YNTIICGYCSLNRL-DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           ++ ++   CS +++  E+ +L+  +    + P+  +  + +++     R +D   +FS++
Sbjct: 114 FSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEI 173

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           +E G + +   Y   I    K  ++K A ++   M    +SP +  Y+++I GLCK   M
Sbjct: 174 VESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRM 233

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A   F   LD  + P+ +TY  LI GYCK G+  EA  + + M    + P  +  ++L
Sbjct: 234 KDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSL 293



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 34/219 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP- 60
           L K+  +  A  L  ++T +GL  D+ITYN++I GY S   + +A++L+E +    +KP 
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636

Query: 61  ---------------------------------NSITFTILIDAFCKEGRMDDATMMFSK 87
                                            + + +  LI  + + G +  A  + S 
Sbjct: 637 LNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSA 696

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G + + +TY+CLI G+FK   M    ++  +M    + P   +Y ILI G CK   
Sbjct: 697 MEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKD 756

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + A   +    +N   P V     LI G  + GR  +A
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA 795


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 123/222 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +++ AL+LFG+++ +G +PDI T+N++I G C  ++++EA+ L+  +    +  N
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+ AF     +  A  +  +ML +G   + +TY+ LI    K+  ++    ++E
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I P I+S +ILI GLC+ G + +AL      +   L PD+VTY  LI G CK G
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
              EA  L++ +   GI PD +  +TL   +       + C+
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACL 678



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+ +L +AL+L  ++  +  EP++ITY  +I G+C   RL+EA ++   ++   L  N
Sbjct: 387 LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LI A CK+G +++A  +F +M  KG K ++ T++ LI+G  K+  M+ A  +Y 
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506

Query: 122 EMCENNISPNIVSYSI-----------------------------------LIDGLCKRG 146
           +M    +  N V+Y+                                    LI  LCK G
Sbjct: 507 DMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +E+ L  F   L   + P +++  ILI G C+ G+  +A++    M+  G+ PD
Sbjct: 567 AVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPD 621



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L+  +   G EPD  T+N +I G      L  A++L  ++   + +PN IT+TILI+ FC
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFC 423

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K+GR+++A  + + M  KG   N V Y+CLI    K  N++ A  ++ EM      P+I 
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIY 483

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ LI+GLCK   MEEAL  +H      ++ + VTY  L+  +       +A +L D M
Sbjct: 484 TFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543

Query: 194 LRNG 197
           L  G
Sbjct: 544 LFRG 547



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 5/176 (2%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EPD+ T+N +I G C   R+ EA +L +++       +++T+  L+   C+ G++D+A  
Sbjct: 272 EPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARA 331

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCENNISPNIVSYSILIDGL 142
           + +K+    P  N V Y+ LI GY  S   + A D +Y  M      P+  +++I+IDGL
Sbjct: 332 LLNKI----PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGL 387

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
            K+G +  AL   +  +     P+V+TY ILI G+CK GR  EA ++ +SM   G+
Sbjct: 388 VKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGL 443



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 5/201 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A KL  ++  RG   D +TY  ++ G C + ++DEA  L  K+      PN
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPN 340

Query: 62  SITFTILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++ +  LI  +   GR ++A  ++++ M+  G + +  T++ +IDG  K   + SA ++ 
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM      PN+++Y+ILI+G CK+G +EEA    +      L  + V Y  LI   CK 
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   EA+QL+  M   G  PD
Sbjct: 461 GNIEEALQLFGEMSGKGCKPD 481



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 5/202 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A  +F  +  RG+ P + T+  ++   C ++ +D A  L   +      PNS+ +  LI
Sbjct: 188 VAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLI 247

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A C+  R+ +A  +   M     + +V T++ +I G  ++  +  A  + + M     S
Sbjct: 248 HALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFS 307

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ- 188
            + ++Y  L+ GLC+ G ++EA       L+    P+ V Y  LI GY  +GR  EA   
Sbjct: 308 TDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDL 363

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
           LY++M+  G  PD    + + D
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMID 385



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 80/144 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++  L LF ++  +G+ P II+ N +I G C   ++++A++  + +    L P+
Sbjct: 562 LCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPD 621

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK G + +A+ +F+K+  +G + + +TY+ LI  +        A  +  
Sbjct: 622 IVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLY 681

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +  ++   PN V++SILI+ + K+
Sbjct: 682 KGVDSGFIPNEVTWSILINYIVKK 705



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM----------- 113
           F +++  + K G    AT +   M           YSC  D  FKS N+           
Sbjct: 137 FILIMKHYGKAGLPGQATRLLLDMWG--------VYSC--DPTFKSYNVVLDILVDGDCP 186

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           + A +V+ +M    +SP + ++ +++  LC    ++ A         +  +P+ V Y  L
Sbjct: 187 RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL 246

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           I   C+  R +EA+QL + M      PD
Sbjct: 247 IHALCENNRVSEALQLLEDMFLMCCEPD 274


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 118/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  L  L+E  +L + +    ++P+  
Sbjct: 152 KEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVY 211

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDD   +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 212 TYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 271

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++V+Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 272 LSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 331

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 332 ETAFEYRXRMIKENIRLDDVAYTAL 356



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+   +L   +   G++PD+ TY+ +I G C  +++D+  +LF+++    L PN 
Sbjct: 186 IKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNG 245

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    ++VTY+ LI G  K  ++K A D+ +E
Sbjct: 246 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDE 305

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 306 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGR 365

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 366 SVDAEKMLREMLSVGLKPE 384



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D   +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 220 LCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+   
Sbjct: 280 LVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRX 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 340 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 399

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                 +L   M R+G +P      ++  YN+  +G
Sbjct: 400 DVWTGSKLMKEMQRDGYVP------SVVTYNVLMNG 429



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 100/189 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  L++ + K G +++ 
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEX 194

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M   G + +V TYS LI+G  K   M    ++++EM +  + PN V+++ LIDG
Sbjct: 195 FRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDG 254

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD+VTY  LI G CK G   +A  L D M   G+ PD
Sbjct: 255 HCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 314

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 315 KITYTTLID 323



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 64/146 (43%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ +I A+ + G + DA   +    E   +    T   +++   K +  K  +  YEE  
Sbjct: 73  FSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 132

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV++  L+ GY K G   
Sbjct: 133 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 192

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           E  +L  +M  +G+ PD    S L +
Sbjct: 193 EXFRLKKAMQASGVQPDVYTYSVLIN 218


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 114/198 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  LK+  ++ ++G +   +TYNTII G      LDEA+ L+ +L      P   
Sbjct: 813  KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC 872

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K+G ++DA  +F +MLE G + N   Y+ L++GY  + + +   +++E M
Sbjct: 873  TYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 932

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             E  ++P+I SY+++ID LC  G + + L  F    D  L PD++TY +LI G  K+GR 
Sbjct: 933  VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 992

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ LY+ M + GI P+
Sbjct: 993  EEALSLYNDMEKKGIAPN 1010



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 109/200 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K+ +++ A  LF ++ + G EP+   YN ++ GY      ++  +LFE +    + P+
Sbjct: 881  LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++T++ID  C +GR++D    F ++ + G + +++TY+ LI G  KS  ++ A  +Y 
Sbjct: 941  IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +M +  I+PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
             P  A   Y  M+  G  P+
Sbjct: 1061 SPENAFAAYGRMIVGGCRPN 1080



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 110/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    +  + L G++  RG+ P++ +Y   I       RL+EA ++  K+     KP+ +
Sbjct: 218 KRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVV 277

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T+LI   C  GR+ DA  +F KM     K + VTY  L+D    S + +S  +++  +
Sbjct: 278 TNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNAL 337

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N+VSY+  +D LC+ G ++EAL  F       ++P   +Y  LI G+ KA R 
Sbjct: 338 KADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRF 397

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
             A++L++ M  +G  P+G       +Y+ +S  S
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALK +  +  +G+ PD++  N ++ G     RL  A ++F +L  + + P++IT+T++I 
Sbjct: 435 ALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIK 494

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K    D+A  +F++M+E     +V+  + LID  +K+     A+ ++ E+ E N+ P
Sbjct: 495 CCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ L+ GL + G ++E +        N   P+++TY  ++   CK G    A+ + 
Sbjct: 555 TDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDML 614

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
            SM  NG MPD      L+ YN
Sbjct: 615 YSMTMNGCMPD------LSSYN 630



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 103/192 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L  +  + G+     +YN +ICG    + +D A +LF ++  +   P+  T+ +++
Sbjct: 749 AAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLIL 808

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K  R++D   +  +M  KG K+  VTY+ +I G  KS+ +  A ++Y ++     S
Sbjct: 809 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 868

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   +Y  L+DGL K G +E+A   F   L+    P+   Y IL+ GY  AG   +  +L
Sbjct: 869 PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928

Query: 190 YDSMLRNGIMPD 201
           ++SM+  G+ PD
Sbjct: 929 FESMVEQGMNPD 940



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +++  L   G   ++++Y   +   C + R+DEA+ +F+++    + P   ++  LI  F
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGF 391

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K  R + A  +F+ M   GP  N  T+   I+ + KS     A   YE M    I P++
Sbjct: 392 LKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDV 451

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+ + ++ GL K G +  A   FH      + PD +TY ++I+   KA    EAM+++  
Sbjct: 452 VAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAE 511

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M+ N   PD L +++L D
Sbjct: 512 MIENRCAPDVLAMNSLID 529



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 20/231 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F +L   G+ PD ITY  +I      +  DEA+++F ++   +  P+
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K GR ++A  +F ++ E   +    TY+ L+ G  +   +K    + E
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N+  PNI++Y+ ++D LCK G +  AL   +    N  +PD+ +Y  ++ G  K G
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEG 640

Query: 182 RPTEAMQLY------------------DSMLRNGIMPDGLLLSTLADYNLQ 214
           R  EA  ++                   S +R+G+M +   L T+ +Y LQ
Sbjct: 641 RLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA--LHTVREYILQ 689



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 1/217 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   L+ A ++  ++ + G +PD++T   +I   C   RL +A  +F K+     KP
Sbjct: 250 VLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKP 309

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+D     G     + +++ +   G   NVV+Y+  +D   +   +  A DV+
Sbjct: 310 DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVF 369

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P   SY+ LI G  K      AL  F+    +   P+  T+ + I  + K+
Sbjct: 370 DEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKS 429

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G   +A++ Y+ M   GI+PD ++      Y L  +G
Sbjct: 430 GESLKALKRYELMKSKGIVPD-VVAGNAVLYGLAKTG 465



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 73/134 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L  +  L+  L  F QLTD GLEPD+ITYN +I G     RL+EA+ L+  +    + PN
Sbjct: 951  LCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 1010

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              T+  LI    K G+  +A  M+ ++L KG K NV TY+ LI GY  S + ++AF  Y 
Sbjct: 1011 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYG 1070

Query: 122  EMCENNISPNIVSY 135
             M      PN  +Y
Sbjct: 1071 RMIVGGCRPNSSTY 1084



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%)

Query: 13   KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
            +LF  + ++G+ PDI +Y  +I   C+  RL++ +  F++LT + L+P+ IT+ +LI   
Sbjct: 927  ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986

Query: 73   CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
             K GR+++A  +++ M +KG   N+ TY+ LI    K+     A  +YEE+      PN+
Sbjct: 987  GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV 1046

Query: 133  VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             +Y+ LI G    G  E A  A+   +     P+  TY
Sbjct: 1047 FTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 35/239 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL +F ++  +G+ P   +YN++I G+   +R + A++LF  +      PN  T  
Sbjct: 361 RVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHV 420

Query: 67  ILID-----------------------------------AFCKEGRMDDATMMFSKMLEK 91
           + I+                                      K GR+  A  +F ++   
Sbjct: 421 LFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAM 480

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   + +TY+ +I    K+ N   A  ++ EM EN  +P++++ + LID L K G   EA
Sbjct: 481 GISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEA 540

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              F+   + +L P   TY  L+ G  + G+  E MQL + M  N   P+ +  +T+ D
Sbjct: 541 WKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD 599



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 8/212 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K    + A K+F +L +  LEP   TYNT++ G     ++ E +QL E +      P
Sbjct: 530 MLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPP 589

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N IT+  ++D  CK G ++ A  M   M   G   ++ +Y+ ++ G  K   +  AF ++
Sbjct: 590 NIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMF 649

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV----VTYAILIRG 176
            +M +  ++P+  +   ++    + GLM+EAL   H   +  L PD      +   L+ G
Sbjct: 650 CQM-KKVLAPDYATVCTILPSFVRSGLMKEAL---HTVREYILQPDSKVDRSSVHSLMEG 705

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             K     ++++  +++  +G++ D L LS +
Sbjct: 706 ILKRDGTEKSIEFAENIASSGLLLDDLFLSPI 737



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 9/198 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSI 63
           + AL+LF  +     +P ++ + T  C Y      +  R+ +  Q+F+ +    +K N  
Sbjct: 82  EEALELFLSVAR---QPRVV-HTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVG 137

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  +  A   EG +  A +    M E G   N  TY+ LI    KS   + A DVY+ M
Sbjct: 138 TFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAM 197

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P + +YS+L+    KR   E  +          + P+V +Y I IR   +AGR 
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA ++   M   G  PD
Sbjct: 258 EEAYRILRKMEEEGCKPD 275



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 89/200 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    + +++    +   GL  D +  + II  +C       A +L +K   + +   
Sbjct: 706 ILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLK 765

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LI     E  +D A  +FS+M   G   +  TY  ++D   KS  ++    + E
Sbjct: 766 TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQE 825

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K  +++EA+  ++  +     P   TY  L+ G  K G
Sbjct: 826 EMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDG 885

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A  L+D ML  G  P+
Sbjct: 886 NIEDAEALFDEMLECGCEPN 905



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+  LI    K G   +A  ++  M   G    V TYS L+  + K ++ ++   + 
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLL 229

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    + PN+ SY+I I  L + G +EEA        +    PDVVT  +LI+  C A
Sbjct: 230 GEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDA 289

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  +A  ++  M  +   PD +   TL D
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLD 319


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A +LF ++  RGLEP+ +TY  +I   C    +++A+ LF+K+    +K  
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LI+ +CK+G +D A  + S M+++G      +YS LI G  ++ ++ S  +++ 
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I+ N  +++ LI+G CK   M+EA   F   +D++++P+ VT+ ++I GYC  G
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A QLYD M+  G+ PD     +L
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSL 554



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 2/221 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L   +   GL P   +Y+ +I G C    L   ++L  ++    +  N+ 
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI+ FCK+ +MD+A  +F KM++     N VT++ +I+GY    N++ AF +Y++M
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E  + P+  +Y  LI GLC    + +A   F   L+N + + +  +   L+ G+ + GR
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKA-NEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            TE   L+D M   G+  D +  + +    L+    ++ C+
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 107/188 (56%), Gaps = 1/188 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ ++G++PD I Y  +I        + +A+  ++++      PN++T T+LI+  C
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +  A ++  +ML      N  TY+C +D +    +M+ A D++  M + +++ +IV
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIV 758

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           S++ILI GLCK G ++EA+       ++   PD ++Y+ +I   CK G   +A +L++ M
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818

Query: 194 LRNGIMPD 201
           L  G+ PD
Sbjct: 819 LYKGLKPD 826



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE ++  AL  + Q+   G  P+ +T+  +I   C    L  A  L +++    + PN
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   +D F  EG M+ A  + S ML+ G  A++V+++ LI G  K+  ++ A D+  
Sbjct: 723 KFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E+  SP+ +SYS +I  LCK G + +A   ++  L   L PDVV Y I IR     G
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A+ +Y +M+R+G+ P+
Sbjct: 842 ESDKALGIYTNMIRSGVQPN 861



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+++   + + G+  D +TY T++ G+C +  L+ A+++   +  +   P+
Sbjct: 243 LCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPS 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + +ID   K+  +++A  +  K+ + G   NV  Y+ LID   K++    A  +++
Sbjct: 303 EANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFK 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+Y+ILI  LCKRG++E+AL  F    D  +   V  Y  LI GYCK G
Sbjct: 363 EMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQG 422

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L   M++ G+ P     S L
Sbjct: 423 SLDRARGLLSGMVKEGLTPTAASYSPL 449



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 69/271 (25%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICG--------------------YCSLN----- 41
           ++  A +L+ Q+ + GL+PD  TY ++I G                    Y  LN     
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 42  ----------RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                     R  E   L++++    +K + ++FTI++ A  K+   + + ++F +M E+
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K + + Y+C+ID   K +NM  A + +++M  +  SPN V++++LI+ LCK G +  A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 152 ---------------LYAFHCALD-------------------NHLLPDVVTYAILIRGY 177
                           + ++C LD                      L  +V++ ILI+G 
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 767

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CKAG+  EA+ L   +  +G  PD +  ST+
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTI 798



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  L  ++   G++   + YN ++ G C   R+ EAV++   +  + +  + +T+ 
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FC+   ++ A  +   M+  G   +    S +ID   K + ++ AF +  ++ + 
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+ LID LCK    ++A   F       L P+ VTYAILI   CK G   +A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 187 MQLYDSMLRNGI 198
           + L+D M   GI
Sbjct: 393 LCLFDKMRDKGI 404



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 36/251 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L + ++L  ++ +RG+  +  T+  +I G+C   ++DEA +LF+K+    + PN
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID---------------- 105
            +TF ++I+ +C  G +  A  ++ +M+E G K +  TY  LI                 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 106 -------------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                              G+F+       + +++EM    +  ++VS++I++    K+ 
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             E++   F    +  + PD + Y  +I    K     +A+  +D M+ +G  P+ +  +
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 207 TLADYNLQSSG 217
            L + NL  SG
Sbjct: 693 VLIN-NLCKSG 702



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  LF ++   G+  D   Y   I  YC    LD A  L  ++    +K +
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +L+   CK  R+ +A  + + M+  G  A+ VTY  L+ G+ + + ++ A  +  
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKA 180
           +M      P+  + S +ID L K+ L+EEA ++  C L D  ++P+V  Y  LI   CK 
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEA-FSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  +A +L+  M   G+ P+ +  + L
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAIL 379



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T + ++ +  K  +   A  +F KML+ G   +   Y+  I  Y +S+N+  A  + 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    +  + V Y++L+ GLCK   ++EA+   +  ++  +  D VTY  L+ G+C+ 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
                A+++   M+R G +P
Sbjct: 282 EELEMALRITHDMIRLGFVP 301


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L  ++  + + PDI TY+T+I   C L++ +    LF ++  + + PN  
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC 284

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  +ID  CKEG+++DA  +   M+EKG   +V+TY+ +IDGY     +  A ++++ M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              +I P+I+SY+ILI+G  ++  ++EA+          L P +VT  +L+ G  + GR 
Sbjct: 345 INKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A   +D ML  G +PD
Sbjct: 405 KSAQNFFDEMLSAGHIPD 422



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L  E  +  A+ LF +L    + EP+ + Y T++ G C      +A  L   +     KP
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKP 211

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+TI+IDAFCK+G +D AT + ++M +K    ++ TYS LID   K    ++   ++
Sbjct: 212 NTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLF 271

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   NI PN+ +++ +IDGLCK G +E+A       ++  + PDV+TY ++I GY   
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+   A +++DSM+   I PD
Sbjct: 332 GQVDRAREIFDSMINKSIEPD 352



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 114/214 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  + ++ +EPDII+YN +I GY    ++DEA+Q+  +++   LKP+ +T  
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+    + GR   A   F +ML  G   ++ T+  L+ GYFK+  ++ A   + ++   
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               NI  Y+ +IDGLCK G +++A   F       L PDV+TY  +I GYC+ G   EA
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +   M  NG + D    + +    L+S+   E
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 104/199 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  L   +     +P+  TY  +I  +C    LD A  L  ++    + P+
Sbjct: 188 LCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPD 247

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LIDA CK  + ++   +F +M+      NV T++ +IDG  K   ++ A ++  
Sbjct: 248 IFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMR 307

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P++++Y+++IDG   RG ++ A   F   ++  + PD+++Y ILI GY +  
Sbjct: 308 YMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQK 367

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  EAMQ+   + + G+ P
Sbjct: 368 KIDEAMQVCREISQKGLKP 386



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  LF Q+      P + +++ ++     +      V LF ++  +++  +    +I
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++++ C   R D    + +   +KG   N VT++ LI G F    +K A  +++++   N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 128 I-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           I  PN V Y  +++GLCK+G  ++A             P+  TY I+I  +CK G    A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M +  I PD    STL D
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLID 256



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 1/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H  + + LF ++    +       + ++   C ++R D    +        +  N +TFT
Sbjct: 87  HYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFT 146

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LI     E ++ DA  +F K++ +   + N V Y  +++G  K  + + AFD+   M +
Sbjct: 147 TLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN  +Y+I+ID  CK G+++ A    +      + PD+ TY+ LI   CK  +   
Sbjct: 207 GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
              L+  M+   I P+    +++ D
Sbjct: 267 VRTLFLEMIHLNIYPNVCTFNSVID 291



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 71/133 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+  F +L  R  + +I  Y  +I G C   +LD+A   FEKL  + L P+ IT+T 
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C+EG +D+A  M  KM + G  A+  TY+ ++ G+ +S  +       EE+   +
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKS 558

Query: 128 ISPNIVSYSILID 140
            S    +  +L+D
Sbjct: 559 FSFEAATVELLMD 571



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 47/104 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A   F +L   GL PD+ITY  +I GYC    LDEA  +  K+       +
Sbjct: 468 LCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLAD 527

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           + T+ +++  F +  ++ +      ++  K       T   L+D
Sbjct: 528 NRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKP 60
           L K+  +  A +L  ++  RG +P++ T+ T+I G C     ++A +LF KL      KP
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T +I+ +CKE +++ A M+ S+M E+G   N  TY+ LIDG+ K  N   A+++ 
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +   SPNI +Y+ +IDGLCK+G ++EA    +    + L  D VTY IL+  +C+ 
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQ 483

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                ++  ++ ML+ G  PD
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPD 504



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F ++  RG+ PD +++  ++   C++ R+ EA +    +       ++ T T+
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTL 264

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +IDAFC++G ++     F KM+E G   NV+ ++ LI+G  K  ++K AF++ EEM    
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             PN+ +++ LIDGLCK+G  E+A   F      +   P+V TY  +I GYCK  +   A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M   G++P+    +TL D
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLID 408



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 106/199 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G  P+I TYN II G C    LDEA +L  K++   L+ + +T+TIL+ 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++   + + + F+KML+ G   ++ +Y+ LI  + + + MK +  ++EE     + P
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIP 538

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ +I G C+ G    A+  F    ++   PD +TY  LI G CK  +  +A  LY
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 191 DSMLRNGIMPDGLLLSTLA 209
           D+M+  G+ P  +   TLA
Sbjct: 599 DAMMDKGLSPCEVTRLTLA 617



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  L  ++ ++GL P+  TY T+I G+C +     A +L + +      PN  
Sbjct: 377 KEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY 436

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID  CK+G +D+A  + +K+   G +A+ VTY+ L+  + +  +   +   + +M
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +   +P+I SY+ LI   C++  M+E+   F  A+   L+P   TY  +I GYC+ G  
Sbjct: 497 LKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A++L+  M  +G  PD +    L
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGAL 581



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A +L  +++  GL+ D +TY  ++  +C     + ++  F K+  V   P+
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPD 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++T LI  FC++ +M ++  +F + +  G      TY+ +I GY +  N   A  +++
Sbjct: 505 IHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +  +P+ ++Y  LI GLCK   +++A   +   +D  L P  VT   L   YCK  
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 182 RPTEAMQLYDSM 193
             + A+ + D +
Sbjct: 625 DSSTAINVLDRL 636



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 104/195 (53%), Gaps = 1/195 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +  ++ ++GL P   T N ++     +  ++ A  +F ++    + P+ ++F +
Sbjct: 170 LKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKL 229

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++ A C  GR+ +A    + M+E+G   +  T + +ID + +   +      + +M E  
Sbjct: 230 MVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN+++++ LI+GLCK+G +++A       +     P+V T+  LI G CK G   +A 
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAF 349

Query: 188 QLYDSMLR-NGIMPD 201
           +L+  ++R +G  P+
Sbjct: 350 RLFLKLVRSDGYKPN 364



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  + +LF +    GL P   TY ++ICGYC       AV+LF++++     P+SI
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CKE ++DDA  ++  M++KG     VT   L   Y K  +  +A +V + +
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
            +      I + + L+  LC  G ++ A   FH  LD    P+V    +L
Sbjct: 637 EKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDKE--PNVNRVTLL 681



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 35/174 (20%)

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           F + G++ +A  M  +M  +G   +  T +C++D       ++ A +++ EMC+  +SP+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 132 IVSY-----------------------------------SILIDGLCKRGLMEEALYAFH 156
            VS+                                   +++ID  C++G +   +  F 
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             ++  L P+V+ +  LI G CK G   +A +L + M+R G  P+    +TL D
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 32/147 (21%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT------ 64
           A+KLF ++++ G  PD ITY  +I G C  ++LD+A  L++ +    L P  +T      
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618

Query: 65  --------------------------FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
                                        L+   C EG++D A + F K+L+K P  N V
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRV 678

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T    ++  ++S       ++ E +CE
Sbjct: 679 TLLGFMNKCYESNKYGLVSELSERICE 705



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
           +AN V   C++  + ++  +K A ++  EM    + P+  + + ++D     GL+E A  
Sbjct: 152 RANEVM-QCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAEN 210

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            F       + PD V++ +++   C  GR  EA +  ++M+  G + D    + + D
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 108/189 (57%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EP+I+ YN +I GYC+   ++ A+++FE +   +  PN  T+T LI   CK G+++ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++FS+M+E G + NVVTY+ LI G     +++ AF +   M  N + PN  ++S+LID 
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCKR  +EEA       +   +  + V Y  LI G CK G+   A +L   M+  G +PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 202 GLLLSTLAD 210
               S+L D
Sbjct: 387 AHSYSSLID 395



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+ LF ++ + GLEP+++TY  +I G C+   L  A +L   +    L PN
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF++LIDA CK  ++++A +    +++KG K N V Y+ LIDG  K+  + +A ++ +
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRG-----------LMEEALYA---------------- 154
           +M      P+  SYS LIDGLC++            +ME+ + A                
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 155 --------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                   F   +   + PD+VTY + +R YC+ GR  +A  +   M+  G+ P+ +  +
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 207 TL 208
           TL
Sbjct: 497 TL 498



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A    G L  +G++ + + Y ++I G C   ++D A +L +K+      P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +++ LID  C++ ++  AT+M   M+EKG +A+ VTY+ +ID   +    +    +++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I+P+IV+Y++ +   C+ G ME+A       +D  + P++VTY  LIRGY   G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             ++A   ++ M+  G  P+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPN 526



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A ++F  +  RG      TY  ++ G      + EA+ +F  +      P++  +  
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYAT 182

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C+ GR ++A ++  + +  G + N+V Y+ LIDGY  +  M+ A  V+E M  N 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+ +Y+ LI GLCK G +E A+  F   ++  L P+VVTY  LI+G C  G    A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  NG++P+    S L D
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLID 325



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 100/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F  +      PD   Y T++ G C   R +EA  L E+      +PN + +  LID
Sbjct: 161 AMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G M+ A  +F  M       NV TY+ LI G  KS  ++ A  ++  M E  + P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI G C  G ++ A    H    N L+P+  T+++LI   CK  +  EA    
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
            S+++ G+  + ++ ++L D
Sbjct: 341 GSLVKKGVKVNEVVYTSLID 360



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + AA +    L   GL PD   Y + + GYC    L  A ++F  +        + T+T 
Sbjct: 88  IPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTA 147

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G + +A  +F  M       +   Y+ ++ G  ++   + A  + EE   N 
Sbjct: 148 LLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG 207

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PNIV Y+ LIDG C  G ME AL  F     N   P+V TY  LI G CK+G+   AM
Sbjct: 208 FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  G+ P+ +  + L
Sbjct: 268 VLFSRMVEAGLEPNVVTYTAL 288



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 95/189 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DAA +L  ++   G  PD  +Y+++I G C   +L +A  + E +    ++ +
Sbjct: 362 LCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQAS 421

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI+ID   +E   +    +F KM+  G   ++VTY+  +  Y +   M+ A  +  
Sbjct: 422 PVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIV 481

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ LI G    GL+ +A   F   +     P+  +Y +L+R   K  
Sbjct: 482 QMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKS 541

Query: 182 RPTEAMQLY 190
               ++ ++
Sbjct: 542 SSDNSVDIW 550



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            L  R    ++ TY T+I  YC    +  A Q    L    L P+S  +T  +  +C+ G
Sbjct: 62  SLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAG 121

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +  A  +F  M  +G      TY+ L+ G   +  ++ A  V+  M  ++ +P+   Y+
Sbjct: 122 MLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYA 181

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            ++ GLC+ G  EEA      A+ N   P++V Y  LI GYC AG    A+++++ M  N
Sbjct: 182 TMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 197 GIMPD 201
              P+
Sbjct: 242 RCSPN 246



 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 12/185 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++E   +   K+F ++   G+ PDI+TY   +  YC   R+++A  +  ++    + PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY- 120
            +T+  LI  +   G +  A   F  M+ KG K N  +Y+ L+    K  +  ++ D++ 
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 121 -----------EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
                      E++ E  +      YS  I  LC+   +EEA + F    + +L P    
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 170 YAILI 174
           Y  +I
Sbjct: 612 YTSII 616



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 1/163 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T LI+A+C  G +  A    + +L  G   +   Y+  + GY ++  +  A  V+
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M          +Y+ L+ GL   G++ EA+  F     +   PD   YA ++ G C+A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           GR  EA  L +  + NG  P+ ++ + L D    ++G  EH +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALID-GYCNAGEMEHAL 232



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++ A  +  Q+ DRG+ P+++TYNT+I GY +L  + +A   FE +     KPN  
Sbjct: 469 EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528

Query: 64  TFTILIDAFCKEGR------------MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ 111
           ++T+L+    K+              M D  ++   + E+        YSC I    +  
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILID 140
            ++ A   +  M   N++P+   Y+ +ID
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A ++   +  +G  PD  TY+ +I   C   ++++A  LF+++  V + P+  T+TI
Sbjct: 436 FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A   F +M   G   +VVTY+ L+  Y K++ +  A D++  M +  
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA--------------FHCALDNHLLPDVVTYA 171
            +PN ++YS L+DGLCK G  ++A  +YA              F     + + P+VVTY 
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G CKA +  +A +L D M  NG  P+ ++   L D
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALID 654



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 1/196 (0%)

Query: 16  GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
           G+ TD  + P+++TY  +I G C  +++ +A +L + ++    +PN I +  LID FCK 
Sbjct: 601 GEHTD-SIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKV 659

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           G++D+A  +F +M + G    V TY+ LID  FK + +  A  V  +M E++ +PN+V+Y
Sbjct: 660 GKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTY 719

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           + +IDGLC+ G  ++AL            P+VVTY  LI G  K+G+   ++QL+  M+ 
Sbjct: 720 TAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMIT 779

Query: 196 NGIMPDGLLLSTLADY 211
            G  P+ +    L ++
Sbjct: 780 QGCAPNYVTYRVLINH 795



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   G+ PD+ TY  +I  +C +  +++A   F+++  V   P+ +T+T 
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           L+ A+ K  ++  A+ +F +M++ G   N +TYS L+DG  K+   + A +VY +M    
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS 590

Query: 125 -------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
                         ++I+PN+V+Y  LIDGLCK   + +A         N   P+ + Y 
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G+CK G+   A +++  M + G +P     ++L D
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLID 689



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 100/183 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   ++  G EP+ I Y+ +I G+C + +LD A ++F +++     P   T+T LID
Sbjct: 630 AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLID 689

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+ R+D A  + S+MLE     NVVTY+ +IDG  +    + A  +   M +   +P
Sbjct: 690 AMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP 749

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LIDGL K G ++ +L  F   +     P+ VTY +LI   C AG   EA  L 
Sbjct: 750 NVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLL 809

Query: 191 DSM 193
             M
Sbjct: 810 SEM 812



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 33/220 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A ++F +++  G  P + TY ++I       RLD A+++  ++      PN +T+T 
Sbjct: 662 LDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTA 721

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  C+ G    A  + S M ++G   NVVTY+ LIDG  KS  +  +  ++ +M    
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--------------LYAFHCA--------------- 158
            +PN V+Y +LI+  C  GL++EA                  +C+               
Sbjct: 782 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGL 841

Query: 159 ---LDNHLLPDVV-TYAILIRGYCKAGRPTEAMQLYDSML 194
              L++H +  +   Y +LI  + KAGR  +A++L+  M+
Sbjct: 842 LEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMM 881



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 12/221 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDE------AVQLFEKL---TCVQLKPN 61
           A KL  ++   G  P  + YN  I   CS   L        A +++E++   +CV  K N
Sbjct: 363 AYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVN 422

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  F       C  G+ D A  +   M+ KG   +  TYS +I    ++  ++ AF +++
Sbjct: 423 TANFA---RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 479

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P++ +Y+ILID  CK GL+E+A   F         P VVTY  L+  Y K  
Sbjct: 480 EMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTK 539

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +  +A  ++  M+  G  P+ +  S L D   ++  SQ+ C
Sbjct: 540 QVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 7/202 (3%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I EC    ALKL   +  RG  P+++TY ++I G     ++D ++QLF ++      PN 
Sbjct: 729 IGECQ--KALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ +LI+  C  G +D+A  + S+M +      V  Y  ++ G+  S+   ++  + EE
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEE 844

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV---TYAILIRGYCK 179
           +  + +      Y +LID   K G +E+AL      ++     ++    TY  LI+  C 
Sbjct: 845 LESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCL 904

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
           A +  +A +LY  + R G++P+
Sbjct: 905 ASQLEKAFELYSEITRKGVVPE 926



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 85/157 (54%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C + + D+A Q+ + +      P++ T++ +I   C+  +++ A ++F +M   G   +V
Sbjct: 431 CGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDV 490

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TY+ LID + K   ++ A   ++EM     SP++V+Y+ L+    K   + +A   FH 
Sbjct: 491 YTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHR 550

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            +D    P+ +TY+ L+ G CKAG   +A ++Y  M+
Sbjct: 551 MVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 6/215 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++    D A+    ++      P+++TY T++ G+    +L    ++   +      PN
Sbjct: 284 LMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPN 343

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------ 115
              F  L+ ++C       A  + ++M   G     V Y+  I      + + S      
Sbjct: 344 PSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLAL 403

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  VYEEM  ++   N V+ +     LC  G  ++A       +    +PD  TY+ +I 
Sbjct: 404 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVIT 463

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             C+A +  +A  L+  M   G++PD    + L D
Sbjct: 464 FLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 6/182 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +    +I G    +  DEA+    ++ C    PN +T+  L+  F K+ ++     + 
Sbjct: 273 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRII 332

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC-- 143
           S M+ +G   N   ++ L+  Y  +++   A+ +   M      P  V Y+I I  +C  
Sbjct: 333 SMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSG 392

Query: 144 ----KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                  L+  A   +   L +  + + V  A   R  C  G+  +A Q+   M+R G +
Sbjct: 393 EELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFV 452

Query: 200 PD 201
           PD
Sbjct: 453 PD 454



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 3/190 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+  G+L D G  P   TYN ++    +  ++D   ++ ++++ +    +  T      
Sbjct: 191 ALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQ 250

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEGR  DA +M  +   +  K + V  + +I G  ++     A      M  N+  P
Sbjct: 251 ALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP 307

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y  L+ G  K+  +          ++    P+   +  L+  YC A     A +L 
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367

Query: 191 DSMLRNGIMP 200
           + M   G  P
Sbjct: 368 NRMAGCGCPP 377



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI---TFT 66
           A+L L  +L   G+      Y  +I  +    RL++A++L +++  V    N     T+T
Sbjct: 837 ASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYT 896

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI A C   +++ A  ++S++  KG    +  + CLI G  K      A  +   MC+ 
Sbjct: 897 SLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDE 956

Query: 127 NIS 129
            ++
Sbjct: 957 GVN 959


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 2   LIKECHLDAALKLFGQLTDR-----GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           L K   +D AL+LF  +  R     G EPD+I+Y+T+I   C   R+D+A + F+++  V
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
              PN +T++ LID  CK  R  +   +   M EKG   N++ ++ ++   +K+   + A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
              +E + ++   PN+V+Y++ + GLCK G ++EA       +++ + PDV+TY+ +I G
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +CKAGR  +A  ++  M+ +  +P  +   TL
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 401



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 118/221 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A + F +L   G +P+++TYN  + G C   R+DEA ++  ++   ++ P+
Sbjct: 300 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPD 359

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ +ID FCK GRMD A  +F++M+      + VT+  L+ G+ + +  + AF V+E
Sbjct: 360 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 419

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      P + +Y++L+D +C    +E AL  +H        PD  TYA LI+  C+A 
Sbjct: 420 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRAR 479

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           R  EA +  D M  + ++P+G +   L +   +     E C
Sbjct: 480 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 520



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 127/247 (51%), Gaps = 41/247 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L  ++ +RG++ D++ ++T+I G C   R+DEA++ F+ +   +  PN I
Sbjct: 123 KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVI 181

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK-----GPKANVVTYSCLIDGYFKSQNMKSAFD 118
           T+  +++  CK  R+D+A  +F  M ++     G + +V++YS +ID   K+Q +  A++
Sbjct: 182 TYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 241

Query: 119 VYEEMCENNISPNIVSYSILIDGLCK----------------RGL--------------- 147
            ++ M     +PN+V+YS LIDGLCK                +G                
Sbjct: 242 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301

Query: 148 ----MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
                E+A   F   L +   P+VVTY + + G CKAGR  EA ++   M+ + + PD +
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361

Query: 204 LLSTLAD 210
             S++ D
Sbjct: 362 TYSSIID 368



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 7/208 (3%)

Query: 9   DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           D A   F    ++ G + +  T   ++  +    R +EA +L ++       PN I +T 
Sbjct: 57  DVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTT 116

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+ FCK G++D A  +  +M E+G K +V+ +S LI G  +   +  A + ++ M E  
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-E 175

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAF-----HCALDNHLLPDVVTYAILIRGYCKAGR 182
            SPN+++Y+ +++GLCK   ++EAL  F          +   PDV++Y+ +I   CKA R
Sbjct: 176 CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 235

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A + +  M   G  P+ +  S+L D
Sbjct: 236 VDKAYEYFKRMRAVGCAPNVVTYSSLID 263



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 105/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  ++ +  + PD+ITY++II G+C   R+D+A  +F ++   +  P+
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  L+  F +  +  +A  +   M+  G    + TY+ L+D    + +++SA ++Y 
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      P+  +Y+ LI  LC+   ++EA         ++++P+      L+   CK G
Sbjct: 455 KMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 514

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  + D+++  G  P G     L +
Sbjct: 515 EVDEACSVLDNVVEVGCQPLGETFKILVE 543



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 33/245 (13%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++AL+++ ++  +  +PD  TY  +I   C   R+DEA +  + +    + PN      
Sbjct: 446 VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 505

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPK--------------------------------A 95
           L++  CK+G +D+A  +   ++E G +                                A
Sbjct: 506 LVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVA 565

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +  TYS  +    K+     A +V E+M    + P+  +Y  ++  LC    +E A+  F
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
                    P +VTY +LI   C A    EA +++++M+  G  P    + TL+   L+ 
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC-LRD 684

Query: 216 SGSQE 220
           +G Q+
Sbjct: 685 AGYQD 689



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++   + + G  P + TYN ++   C  + ++ A++++ K+   + +P+  T+  LI 
Sbjct: 414 AFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQ 473

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  R+D+A      M       N      L++   K   +  A  V + + E    P
Sbjct: 474 CLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQP 533

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              ++ IL++ L  R   E A            + D  TY++ +   CKAG+P EA+++ 
Sbjct: 534 LGETFKILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVI 590

Query: 191 DSMLRNGIMPD 201
           + M+  G+ PD
Sbjct: 591 EQMVLKGVRPD 601



 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)

Query: 1   MLIKECHL----DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +L++E +L    +AA KL   L   G   D  TY+  +   C   + DEAV++ E++   
Sbjct: 540 ILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK 596

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            ++P+  T+  ++ + C   R++ A   F KM  +G    +VTY+ LI     +     A
Sbjct: 597 GVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEA 656

Query: 117 FDVYEEMCENNISPNIVSYSIL 138
           F ++E M     +P   +   L
Sbjct: 657 FRIFEAMVAAGFTPQAQTMRTL 678


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P +++YNT++ GY  L  L+E  +L   +    ++P+  
Sbjct: 148 KEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A +VY++M
Sbjct: 208 TYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G + +A    H  +D      L PD +TY  LI G CK
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGALNQA----HDLMDEMSMKGLKPDKITYTTLIDGCCK 323

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 324 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 352



 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 110/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+   KL   +   G++PD+ TY+ +I G C  +++D+A +LFE++    L PN +TFT 
Sbjct: 187 LNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K   +  A D+ +EM    
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 367 KMMREMLSFGLKPD 380



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G ++ A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 276 LITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +  +L   M R+G  P
Sbjct: 396 DVWKGSKLLKEMQRDGHAP 414



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  + +     + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +++   + S M   G + +V TYS LI+G  K   M  A +++E
Sbjct: 171 VVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFE 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 231 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 291 ALNQAHDLMDEMSMKGLKPDKITYTTLID 319



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 74/133 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  L  +++ +GL+PD ITY T+I G C    LD A +  +++    ++ +
Sbjct: 286 LCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++     + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +  +P++V+
Sbjct: 406 EMQRDGHAPSVVT 418


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 114/198 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  LK+  ++ ++G +   +TYNTII G      LDEA+ L+ +L      P   
Sbjct: 813  KSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC 872

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K+G ++DA  +F +MLE G + N   Y+ L++GY  + + +   +++E M
Sbjct: 873  TYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 932

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             E  ++P+I SY+++ID LC  G + + L  F    D  L PD++TY +LI G  K+GR 
Sbjct: 933  VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 992

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ LY+ M + GI P+
Sbjct: 993  EEALSLYNDMEKKGIAPN 1010



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 109/200 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K+ +++ A  LF ++ + G EP+   YN ++ GY      ++  +LFE +    + P+
Sbjct: 881  LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++T++ID  C +GR++D    F ++ + G + +++TY+ LI G  KS  ++ A  +Y 
Sbjct: 941  IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +M +  I+PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
             P  A   Y  M+  G  P+
Sbjct: 1061 SPENAFAAYGRMIVGGCRPN 1080



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 110/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    +  + L G++  RG+ P++ +Y   I       RL+EA ++  K+     KP+ +
Sbjct: 218 KRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVV 277

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T+LI   C  GR+ DA  +F KM     K + VTY  L+D    S + +S  +++  +
Sbjct: 278 TNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNAL 337

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N+VSY+  +D LC+ G ++EAL  F       ++P   +Y  LI G+ KA R 
Sbjct: 338 KADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRF 397

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
             A++L++ M  +G  P+G       +Y+ +S  S
Sbjct: 398 NRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALK +  +  +G+ PD++  N ++ G     RL  A ++F +L  + + P++IT+T++I 
Sbjct: 435 ALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIK 494

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K    D+A  +F++M+E     +V+  + LID  +K+     A+ ++ E+ E N+ P
Sbjct: 495 CCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ L+ GL + G ++E +        N   P+++TY  ++   CK G    A+ + 
Sbjct: 555 TDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDML 614

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
            SM  NG MPD      L+ YN
Sbjct: 615 YSMTMNGCMPD------LSSYN 630



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 103/192 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L  +  + G+     +YN +ICG    + +D A +LF ++  +   P+  T+ +++
Sbjct: 749 AAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLIL 808

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K  R++D   +  +M  KG K+  VTY+ +I G  KS+ +  A ++Y ++     S
Sbjct: 809 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 868

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   +Y  L+DGL K G +E+A   F   L+    P+   Y IL+ GY  AG   +  +L
Sbjct: 869 PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928

Query: 190 YDSMLRNGIMPD 201
           ++SM+  G+ PD
Sbjct: 929 FESMVEQGMNPD 940



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +++  L   G   ++++Y   +   C + R+DEA+ +F+++    + P   ++  LI  F
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGF 391

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K  R + A  +F+ M   GP  N  T+   I+ + KS     A   YE M    I P++
Sbjct: 392 LKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDV 451

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+ + ++ GL K G +  A   FH      + PD +TY ++I+   KA    EAM+++  
Sbjct: 452 VAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAE 511

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M+ N   PD L +++L D
Sbjct: 512 MIENRCAPDVLAMNSLID 529



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 1/217 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   L+ A ++  ++ + G +PD++T   +I   C   RL +A  +F K+     KP
Sbjct: 250 VLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKP 309

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+D     G     + +++ +   G   NVV+Y+  +D   +   +  A DV+
Sbjct: 310 DRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVF 369

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P   SY+ LI G  K      AL  F+    +   P+  T+ + I  + K+
Sbjct: 370 DEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKS 429

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G   +A++ Y+ M   GI+PD ++      Y L  +G
Sbjct: 430 GESLKALKRYELMKSKGIVPD-VVAGNAVLYGLAKTG 465



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 73/134 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L  +  L+  L  F QLTD GLEPD+ITYN +I G     RL+EA+ L+  +    + PN
Sbjct: 951  LCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 1010

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              T+  LI    K G+  +A  M+ ++L KG K NV TY+ LI GY  S + ++AF  Y 
Sbjct: 1011 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYG 1070

Query: 122  EMCENNISPNIVSY 135
             M      PN  +Y
Sbjct: 1071 RMIVGGCRPNSSTY 1084



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%)

Query: 13   KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
            +LF  + ++G+ PDI +Y  +I   C+  RL++ +  F++LT + L+P+ IT+ +LI   
Sbjct: 927  ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986

Query: 73   CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
             K GR+++A  +++ M +KG   N+ TY+ LI    K+     A  +YEE+      PN+
Sbjct: 987  GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNV 1046

Query: 133  VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             +Y+ LI G    G  E A  A+   +     P+  TY
Sbjct: 1047 FTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 20/231 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F +L   G+ PD ITY  +I      +  DEA+++F ++   +  P+
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K GR ++A  +F ++ E   +    TY+ L+ G  +   +K    + E
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N+  PNI++Y+ ++D LCK G +  AL   +    N  +PD+ +Y  ++ G  K  
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKED 640

Query: 182 RPTEAMQLY------------------DSMLRNGIMPDGLLLSTLADYNLQ 214
           R  EA  ++                   S +R+G+M +   L T+ +Y LQ
Sbjct: 641 RLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA--LHTVREYILQ 689



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 35/239 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL +F ++  +G+ P   +YN++I G+   +R + A++LF  +      PN  T  
Sbjct: 361 RVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHV 420

Query: 67  ILID-----------------------------------AFCKEGRMDDATMMFSKMLEK 91
           + I+                                      K GR+  A  +F ++   
Sbjct: 421 LFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAM 480

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   + +TY+ +I    K+ N   A  ++ EM EN  +P++++ + LID L K G   EA
Sbjct: 481 GISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEA 540

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              F+   + +L P   TY  L+ G  + G+  E MQL + M  N   P+ +  +T+ D
Sbjct: 541 WKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD 599



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 8/212 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K    + A K+F +L +  LEP   TYNT++ G     ++ E +QL E +      P
Sbjct: 530 MLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPP 589

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N IT+  ++D  CK G ++ A  M   M   G   ++ +Y+ ++ G  K   +  AF ++
Sbjct: 590 NIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMF 649

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV----VTYAILIRG 176
            +M +  ++P+  +   ++    + GLM+EAL   H   +  L PD      +   L+ G
Sbjct: 650 CQM-KKVLAPDYATVCTILPSFVRSGLMKEAL---HTVREYILQPDSKVDRSSVHSLMEG 705

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             K     ++++  +++  +G++ D L LS +
Sbjct: 706 ILKRDGTEKSIEFAENIASSGLLLDDLFLSPI 737



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 9/198 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSI 63
           + AL+LF  +     +P ++ + T  C Y      +  R+ +  Q+F+ +    +K N  
Sbjct: 82  EEALELFLSVAR---QPRVV-HTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVG 137

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  +  A   EG +  A +    M E G   N  TY+ LI    KS   + A DVY+ M
Sbjct: 138 TFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAM 197

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P + +YS+L+    KR   E  +          + P+V +Y I IR   +AGR 
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA ++   M   G  PD
Sbjct: 258 EEAYRILRKMEEEGCKPD 275



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T+  LI    K G   +A  ++  M   G    V TYS L+  + K ++ ++   + 
Sbjct: 170 NAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLL 229

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    + PN+ SY+I I  L + G +EEA        +    PDVVT  +LI+  C A
Sbjct: 230 GEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDA 289

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  +A  ++  M  +   PD +   TL D
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLD 319



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K    + +++    +   GL  D +  + II   C       A +L +K   + +   
Sbjct: 706 ILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLK 765

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LI     E  +D A  +FS+M   G   +  TY  ++D   KS  ++    + E
Sbjct: 766 TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQE 825

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K  +++EA+  ++  +     P   TY  L+ G  K G
Sbjct: 826 EMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDG 885

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A  L+D ML  G  P+
Sbjct: 886 NIEDAEALFDEMLECGCEPN 905


>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
          Length = 478

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 4/207 (1%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            H++ AL+LF  +     +PD+ +YNTII G C   RL EA+ +F ++    + P  +T+
Sbjct: 180 AHIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTY 235

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I    +EG  DDA  +F +M  +G   N+VTYS LIDG  K     SA ++ + M +
Sbjct: 236 TTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIK 295

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               PN+++YS +IDGLCK  ++ EA+            PD   +  LI G C AGR  E
Sbjct: 296 EKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVE 355

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYN 212
           A    D M+  GI P+ +  S  A  N
Sbjct: 356 AANYLDEMVLAGIEPNRVTWSLHARIN 382



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++  +CS     +++A++LF  +     K
Sbjct: 139 LVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIP----K 194

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+  ++  +ID  C+ GR+ +A  MFS+M+ K     VVTY+ +I    +      A  +
Sbjct: 195 PDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKI 254

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + EM    +SPN+V+YS LIDGLCK G    AL      +    LP+++TY+ +I G CK
Sbjct: 255 FHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCK 314

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +EAM++ D M   G  PD  L   L
Sbjct: 315 EHMLSEAMEILDRMRLQGRKPDAGLFGKL 343



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 17/239 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL +F ++  + + P ++TY T+I         D+A+++F ++    + PN
Sbjct: 207 LCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPN 266

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK GR   A  +  +M+++    N++TYS +IDG  K   +  A ++ +
Sbjct: 267 LVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILD 326

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR------ 175
            M      P+   +  LI GLC  G   EA       +   + P+ VT+++  R      
Sbjct: 327 RMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVL 386

Query: 176 -GYCKAGRPTEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSSGS------QEHCI 223
              C  G    A Q+Y S     I  D     LL+ + +  N++ +         E CI
Sbjct: 387 TALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKNNIEKAARVVLDMLSERCI 445


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD  TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK+GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 248 VTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 368 SVDAEKMLREMLSVGLKPD 386



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K   +  A ++Y+ M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A       +   L PD +TY  LI G CK G  
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 334 DTAFEHRKRMIQENIRLDDVAYTAL 358



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M+ KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M RNG +P      ++  YN+  +G
Sbjct: 402 DVWKGSRLLKEMQRNGHVP------SVVTYNVLMNG 431



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +  TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK+G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M+  G+ PD +  +TL D
Sbjct: 297 DLKQANDLIDEMVMKGLKPDKITYTTLID 325



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 195 EGFRLKSAMLASGVQPDXYTYSVL 218


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 113/209 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL++   + ++GL PD  TY  ++ G+C   R  EA  +FE +    L PN  T+T 
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F KEG +++A  +  +M+ +G K NVVTY+ +I G  K+  M  A  ++ EM    
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+  +Y++LIDG  K   M +A           L P   TY++LI G C +    +A 
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           ++ D M+RNG+ P+  +  TL    +Q S
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQES 500



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 113/217 (52%), Gaps = 1/217 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E   + A++L   +   G+ PD+  YN +I G C   +++EA  L   +    +KPN+
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+   I+ + K G +  A   F  ML  G   N V Y+ LI G+    N   A   ++ 
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKC 616

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + P+I +YS +I  L K G  +EA+  F   L   ++PDV  Y  LI G+CK G 
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLA-DYNLQSSGS 218
             +A QLYD ML NGI P+ ++ +TL  DY    SG+
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  A ++  Q+   G++P++  Y T+I  Y   +R + A++L + +    + P+ 
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  LI   C+  ++++A M+   M EKG K N  TY   I+ Y KS  ++ A   +++
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  + I PN V Y+ILI G C  G   EAL  F C L+  L+PD+  Y+ +I    K G+
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EAM ++   L+ G++PD  L ++L
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSL 667



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 1/221 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +    K++G + +  + PD+ TY  +I  +C +  + +   +  ++   + KPN
Sbjct: 217 LLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPN 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I   C+ G +D+A  +   M+EKG   +  TY+ L+DG+ K +  K A  ++E
Sbjct: 276 LFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFE 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + ++PN  +Y+ LIDG  K G +EEAL      +   L  +VVTY  +I G  KAG
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
              +AM L++ ML  GI PD    + L D  L+S    + C
Sbjct: 396 EMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKAC 436



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 100/185 (54%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P++ TYN  I G C    +DEA+++ + +    L P+  T+T+L+D FCK+ R  +A +
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F  M   G   N  TY+ LIDG+ K  N++ A  + +EM    +  N+V+Y+ +I G+ 
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G M +A+  F+  L   + PD  TY +LI GY K+    +A +L   M    + P   
Sbjct: 393 KAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 204 LLSTL 208
             S L
Sbjct: 453 TYSVL 457



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           KE  ++ A +L+ ++   G+ P+I+ YNT+I   GYC    L EA +LF+++    + P+
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ILID   KEG ++ A  +F +  +K    ++  ++ LID + K   +  A ++++
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFD 791

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++PNIV+Y+ILID   K  +MEEA   F      +++P+ +TY  L+  Y + G
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 851

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              + + L+  M   GI  D +    +A
Sbjct: 852 NRFKMISLFKDMEARGIACDAIAYGVMA 879



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 105/201 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE +++ AL++  ++  RGL+ +++TYN +I G      + +A+ LF ++    ++P+
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPD 415

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+ +LID + K   M  A  + ++M  +    +  TYS LI G   S +++ A +V +
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  N + PN+  Y  LI    +    E A+      + N +LPD+  Y  LI G C+A 
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           +  EA  L   M   GI P+ 
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNA 556



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K   +  A+ LF ++   G+EPD  TYN +I GY   + + +A +L  ++   +L P+
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI   C    +  A  +  +M+  G K NV  Y  LI  Y +    + A ++ +
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA------------------------LYA--- 154
            M  N + P++  Y+ LI GLC+   +EEA                        LY+   
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570

Query: 155 --------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                   F   L + ++P+ V Y ILI+G+C  G   EA+  +  ML  G++PD
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 97/190 (51%), Gaps = 1/190 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L+ AL LF +   + +   +  +N++I  +C   ++ EA +LF+ +   +L PN +
Sbjct: 745 KEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 803

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILIDA+ K   M++A  +F  M  +    N +TY+ L+  Y +  N      ++++M
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I+ + ++Y ++    CK G   EAL   + +L   +  +   +  LI   CK  + 
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923

Query: 184 TEAMQLYDSM 193
           +  ++L   M
Sbjct: 924 STVLELLSEM 933



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 51/243 (20%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP-----------------NSITFTILIDA 71
           +Y+ +    C+   + +A  + EKL   +  P                 N   F I ID 
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP- 130
           F   G +++A+ +F   + +G    ++  + L+    K+  M   + VY  M E  I P 
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 131 ---------------------------------NIVSYSILIDGLCKRGLMEEALYAFHC 157
                                            N+ +Y+  I GLC+ G ++EAL     
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKL 301

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            ++  L PD  TY +L+ G+CK  R  EA  +++SM  +G+ P+    + L D  ++   
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 218 SQE 220
            +E
Sbjct: 362 IEE 364



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 35/176 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT---- 66
           A +LF  + D+ L P+I+TY  +I  Y     ++EA QLF  +    + PN++T+T    
Sbjct: 786 ARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 845

Query: 67  -------------------------------ILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                                          ++  A+CKEG+  +A  + +K L +G K 
Sbjct: 846 SYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKL 905

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               +  LI    K + + +  ++  EM +  +S +  + + L+ G  K G  +EA
Sbjct: 906 EDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 961



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 49/108 (45%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           + LF  +  RG+  D I Y  +   YC   +  EA++L  K     +K     F  LI  
Sbjct: 857 ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFH 916

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            CKE ++     + S+M ++    +  T + L+ G++KS N   A  V
Sbjct: 917 LCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKV 964


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 119/208 (57%), Gaps = 1/208 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   L+ F ++   GL+P++++Y+T++  +C    + +A++ +  +  V L PN  T+T 
Sbjct: 181 LPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 240

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA+CK G + DA  + ++ML+ G + NVVTY+ LIDG    +N      + +EM E +
Sbjct: 241 LIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD 300

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           I   +V++ +LIDGLCK  L+ +A+ Y    + D  L  +   Y  +I G CK  +   A
Sbjct: 301 IKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAA 360

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
             L++ M + G++PD    ++L D N +
Sbjct: 361 TTLFEQMAQKGLVPDRTAYTSLMDGNFK 388



 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 107/191 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++AA  LF ++  RGL PD +TYN++I G+  + RLD+ V  FE++  +  +P+ I
Sbjct: 107 KEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 166

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK G++      F +M   G K NVV+YS L+D + K   M+ A   Y +M
Sbjct: 167 TYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 226

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ LID  CK G + +A    +  L   +  +VVTY  LI G C    P
Sbjct: 227 RRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENP 286

Query: 184 TEAMQLYDSML 194
           TE + L D M+
Sbjct: 287 TEGLHLLDEMV 297



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 111/210 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI    ++ A++ F ++    + P   + N ++  +  L + D   + F+ +     KP
Sbjct: 34  VLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKP 93

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              T+ I+ID  CKEG ++ A  +F +M  +G   + VTY+ +IDG+ K   +      +
Sbjct: 94  TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFF 153

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +    P++++Y+ LI+  CK G + + L  F     N L P+VV+Y+ L+  +CK 
Sbjct: 154 EEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKE 213

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A++ Y  M R G++P+    ++L D
Sbjct: 214 GMMQQAIKFYVDMRRVGLVPNEYTYTSLID 243



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+K +  +   GL P+  TY ++I  YC +  L +A +L  ++  V ++ N +
Sbjct: 212 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVV 271

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  C      +   +  +M+E   K  VVT+  LIDG  K++ +  A D +  +
Sbjct: 272 TYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRI 331

Query: 124 CEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             +  +  N   Y+ +IDGLCK   +E A   F       L+PD   Y  L+ G  K G 
Sbjct: 332 SNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGN 391

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA+ L D M+  G+  D L  ++L
Sbjct: 392 VLEALALRDKMVETGMKLDLLAYTSL 417



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 97/186 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +      L  ++EA+Q F K+   ++ P + +   L+  F K G+ D     
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+  G K  V TY+ +ID   K  ++++A  ++EEM    + P+ V+Y+ +IDG  K
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +++ +  F    D    PDV+TY  LI  +CK G+  + ++ +  M RNG+ P+ + 
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 205 LSTLAD 210
            STL D
Sbjct: 203 YSTLVD 208



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 1/199 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  A +L  ++   G+E +++TY  +I G C      E + L +++  + +K   +TF 
Sbjct: 250 NLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFC 309

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +LID  CK   +  A   F ++    G +AN   Y+ +IDG  K   +++A  ++E+M +
Sbjct: 310 VLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQ 369

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P+  +Y+ L+DG  K+G + EAL      ++  +  D++ Y  L+ G     +  +
Sbjct: 370 KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQK 429

Query: 186 AMQLYDSMLRNGIMPDGLL 204
           A    + M+  GI PD +L
Sbjct: 430 ARSFLEEMIGEGIHPDEVL 448



 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 35/132 (26%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++AA  LF Q+  +GL PD   Y                               
Sbjct: 351 LCKGNQVEAATTLFEQMAQKGLVPDRTAY------------------------------- 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               T L+D   K+G + +A  +  KM+E G K +++ Y+ L+ G      ++ A    E
Sbjct: 380 ----TSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 435

Query: 122 EMCENNISPNIV 133
           EM    I P+ V
Sbjct: 436 EMIGEGIHPDEV 447


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 115/212 (54%), Gaps = 6/212 (2%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL+    A  + G +   G +P   T+ T+I G C   ++ EA+QLF+K+T    +P+ 
Sbjct: 56  CHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDV 115

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  LI+  CK+ ++ +A  +FS ML KG   N  TYS LI G     + K A  ++  
Sbjct: 116 LTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 175

Query: 123 MCENNISPNIVSYSILIDGLCKRGL---MEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           M    I P+ ++++ L+D LCK G+   M++A+  F       L+PD VTY  LI G C 
Sbjct: 176 MIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 235

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            GR  +A+ L+  M+  G +PD +    L DY
Sbjct: 236 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 267



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 3/205 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L+ Q+   G+  +  T N +I  +C LNRL  A  +   +  +  +P++ TFT
Sbjct: 25  HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFT 84

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F KM  +G + +V+TY  LI+G  K + +  A  ++ +M   
Sbjct: 85  TLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK 144

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT-- 184
            ISPN  +YS LI GLC  G  +EA+  F+  +   ++PD +T+  L+   CK G     
Sbjct: 145 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIM 204

Query: 185 -EAMQLYDSMLRNGIMPDGLLLSTL 208
            +AM L++ M + G++PD +  +TL
Sbjct: 205 DKAMGLFEEMSQQGLIPDTVTYNTL 229



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  AL LF  +  +G+ P+  TY+++I G C L    EA++LF  +   ++ P+
Sbjct: 125 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 184

Query: 62  SITFTILIDAFCKEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +TF  L+DA CKEG    MD A  +F +M ++G   + VTY+ LI G      ++ A  
Sbjct: 185 QLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 244

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++ EM      P++V+Y IL D LCK   + EA+         +L PD+  Y+I++ G C
Sbjct: 245 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 304

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           +AG    A  L+  +   G+ PD
Sbjct: 305 RAGELEAARDLFSKLSSKGLHPD 327



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 3/209 (1%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL+LF ++T  G +PD++TY T+I G C   +L EA+ LF  +    + PN+ T
Sbjct: 93  EGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFT 152

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS---QNMKSAFDVYE 121
           ++ LI   C  G   +A  +F  M+ +    + +T++ L+D   K    Q M  A  ++E
Sbjct: 153 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFE 212

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + P+ V+Y+ LI GLC  G + +A+  FH  +    +PD+VTY IL    CK  
Sbjct: 213 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 272

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EAM L   +    + PD  + S + D
Sbjct: 273 RLAEAMVLLKVIEGTNLDPDIHIYSIVMD 301



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 100/173 (57%), Gaps = 4/173 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF +++ +GL PD +TYNT+I G C + RL +A+ LF ++      P+ +T+ I
Sbjct: 204 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 263

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L D  CK  R+ +A ++   +       ++  YS ++DG  ++  +++A D++ ++    
Sbjct: 264 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 323

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + P++ +Y+I+I+GLC++GL+ EA   F    +N    D+ +Y+   R   K 
Sbjct: 324 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN----DIESYSTFSRNAFKG 372



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 96/186 (51%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I+ ++ ++     +      + L++++    +  N+ T  ILI++FC   R+  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              +L+ G + +  T++ LI G      +  A  ++++M      P++++Y  LI+GLCK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              + EAL  F   L   + P+  TY+ LI G C  G   EA++L+ +M+   IMPD L 
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 205 LSTLAD 210
            +TL D
Sbjct: 188 FNTLVD 193



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ L   +    L+PDI  Y+ ++ G C    L+ A  LF KL+   L P+
Sbjct: 268 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
             T+TI+I+  C++G + +A+ +F +M E     ++ +YS      FK 
Sbjct: 328 VRTYTIMINGLCQQGLLAEASKLFGEMDEN----DIESYSTFSRNAFKG 372


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 1/201 (0%)

Query: 12  LKLFGQLTDRGLE-PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           + ++ +L D   E P+IITY  ++ G C  NR++EA +L + ++    +PN I +  LID
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALID 652

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G++++A  +F KM E+G   N+ TYS LI+  FK + +     V  +M EN+ +P
Sbjct: 653 GFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTP 712

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ +IDGLCK G  EEA        +    P+V+TY  +I G+ K G+  + ++LY
Sbjct: 713 NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELY 772

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M   G  P+ +    L ++
Sbjct: 773 RDMCSKGCAPNFITYRVLINH 793



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 120/219 (54%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A ++  ++  +G  PD  TY+ +I   C  +++++A  LFE++    + P+  T+TI
Sbjct: 434 FDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTI 493

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G +  A   F +ML      NVVTY+ LI  Y K++ +  A  ++E M    
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA------------FHCALDNH--LLPDVVTYA 171
             PN+V+Y+ LIDG CK G +++A  +YA             +  LD++    P+++TY 
Sbjct: 554 SKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYG 613

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA R  EA +L D+M  NG  P+ ++   L D
Sbjct: 614 ALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALID 652



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 22/222 (9%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   G+ P + TY  +I  +C    + +A   F+++      PN +T+T 
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---- 123
           LI A+ K  ++ DA  +F  ML +G K NVVTY+ LIDG+ K+  +  A  +Y  M    
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 124 ---------------CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
                          CE   +PNI++Y  L+DGLCK   +EEA         N   P+ +
Sbjct: 589 ESSDIDMYFKLDDNDCE---TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQI 645

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            Y  LI G+CK G+   A +++  M   G  P+    S+L +
Sbjct: 646 VYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLIN 687



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL--DEAVQLFEKLTCVQLKP----NSIT 64
           A KLF ++   G +P  + YN  I   CS   L   + ++L EK     L      N + 
Sbjct: 361 AYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVN 420

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +      C  G+ D A  +  +M+ KG   +  TYS +I     +  ++ AF ++EEM 
Sbjct: 421 VSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMK 480

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +N I P++ +Y+ILID  CK GL+++A   F   L ++  P+VVTY  LI  Y KA +  
Sbjct: 481 KNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVF 540

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +A +L++ ML  G  P+ +  + L D + ++    + C
Sbjct: 541 DANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKAC 578



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 70/268 (26%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A ++F ++++RG  P++ TY+++I       RLD  +++  K+      PN +
Sbjct: 656 KTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVV 715

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +ID  CK G+ ++A  +  KM E G   NV+TY+ +IDG+ K   ++   ++Y +M
Sbjct: 716 IYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM 775

Query: 124 CENNISPNIVSYSILIDGLCKRGL----------MEEALYAFHCAL-------------- 159
           C    +PN ++Y +LI+  C  GL          M++  +  H +               
Sbjct: 776 CSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFIT 835

Query: 160 ---------DNHLLPDVVTYAILIRGYCKAGR--------------PT------------ 184
                    +N  +P    Y ILI  + KAGR              P+            
Sbjct: 836 SIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSL 895

Query: 185 -----------EAMQLYDSMLRNGIMPD 201
                      +A +LY SM+   ++P+
Sbjct: 896 IESLSHASKVDKAFELYASMINKNVVPE 923



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 99/186 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A K + ++ D G+  + +  +      C   + D+A ++  ++      P+  T++ 
Sbjct: 399 LELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSK 458

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A ++F +M + G   +V TY+ LID + K+  ++ A + ++EM  +N
Sbjct: 459 VIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDN 518

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   + +A   F   L     P+VVTY  LI G+CKAG+  +A 
Sbjct: 519 CTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKAC 578

Query: 188 QLYDSM 193
           Q+Y  M
Sbjct: 579 QIYARM 584



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD  LK+  ++ +    P+++ Y  +I G C + + +EA +L  K+  V   PN
Sbjct: 689 LFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPN 748

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+T +ID F K G+++    ++  M  KG   N +TY  LI+    +  +  A  + +
Sbjct: 749 VITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLD 808

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----GLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM +     +I SY  +I+G  +      GL++E         +N  +P    Y ILI  
Sbjct: 809 EMKQTYWPRHISSYRKIIEGFNREFITSIGLLDE-------LSENESVPVESLYRILIDN 861

Query: 177 YCKAGRPTEAMQLYDSM 193
           + KAGR   A+ L + +
Sbjct: 862 FIKAGRLEGALNLLEEI 878



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 6/183 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + YN ++ G C  +   EA+ + +++  +   PN +T+ IL+     +G++     +
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S M+ +G   N   ++ L+  Y KS++   A+ ++++M +    P  + Y+I I  +C 
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICS 389

Query: 145 R------GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                   L+E A  A+   LD  ++ + V  +   R  C AG+  +A ++   M+  G 
Sbjct: 390 NEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGF 449

Query: 199 MPD 201
           +PD
Sbjct: 450 VPD 452



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 105/222 (47%), Gaps = 39/222 (17%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +L  ++ + G  P++ITY  +I G+  + ++++ ++L+  +      PN IT+ +L
Sbjct: 731 EEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVL 790

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  C  G +D+A  +  +M +     ++ +Y  +I+G+  ++   ++  + +E+ EN  
Sbjct: 791 INHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENES 848

Query: 129 SPNIVSYSILIDGLCKRGLMEEAL----------------------------------YA 154
            P    Y ILID   K G +E AL                                   A
Sbjct: 849 VPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKA 908

Query: 155 FH---CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           F      ++ +++P++ T+  LI+G  + G+  EA+QL DS+
Sbjct: 909 FELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 7/208 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
            LI++C      + AL+  G+L D G +    TYN +I  +   ++LD A  +  +++  
Sbjct: 175 FLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNS 234

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
             + +  T      + CK GR  DA  +  K  E  P  + V Y+ ++ G  ++   + A
Sbjct: 235 GFRMDGCTLGCFAYSLCKAGRCGDALSLLEKE-EFVP--DTVFYNRMVSGLCEASLFQEA 291

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D+ + M   +  PN+V+Y IL+ G   +G +          +     P+   +  L+  
Sbjct: 292 MDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA 351

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           YCK+   + A +L+  M++ G  P  LL
Sbjct: 352 YCKSRDYSYAYKLFKKMIKCGCQPGYLL 379



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 41/225 (18%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++TY  ++ G     +L    ++   +      PN   F  L+ A+CK      A  +
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMK------------------------------ 114
           F KM++ G +   + Y+  I     ++ +                               
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424

Query: 115 -----------SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
                       AF++  EM      P+  +YS +I  LC    +E+A   F     N +
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGI 484

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +P V TY ILI  +CKAG   +A   +D MLR+   P+ +  ++L
Sbjct: 485 VPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSL 529



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 39/201 (19%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA--------------------- 46
           ++  L+L+  +  +G  P+ ITY  +I   CS   LDEA                     
Sbjct: 765 IEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRK 824

Query: 47  ------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK 94
                       + L ++L+  +  P    + ILID F K GR++ A  +  + +   P 
Sbjct: 825 IIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEE-ISSSPS 883

Query: 95  ---ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
              AN   Y+ LI+    +  +  AF++Y  M   N+ P + ++  LI GL + G  +EA
Sbjct: 884 LAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943

Query: 152 LYAFH--CALDNHLLPDVVTY 170
           L      C +  H+  + V Y
Sbjct: 944 LQLSDSICQMVCHVCSNFVNY 964


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 113/198 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++  +G +P ++TY ++I G   ++RLDEA  LFE+     L+ N +
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   NV T++CL+D   K++ +  A   ++ M
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                +PN ++YSILI+GLC+     +A   +       L P+ +TY  +I G  KAG  
Sbjct: 749 KNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNI 808

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  L++    NG +PD
Sbjct: 809 AEASSLFERFKANGGVPD 826



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K        +LF  + ++G   D   YNT I G+C   ++++A QL E++     +P 
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +    G + NVV YS LIDG+ K   +  A+ + E
Sbjct: 652 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIME 711

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    +    P+ +TY+ILI G C+  
Sbjct: 712 ELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G+ P+ +  +T+
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTM 798



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 107/210 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K   ++AA K+   + + GL P+++T N +I   C   +LDEA  +FE +      P
Sbjct: 416 MLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSP 475

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TF  LID   K+GR+DDA  ++ +ML+     N V Y+ LI  +FK    +    ++
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM     SP++   +  +D + K G   +    F        +PDV++Y+ILI G  KA
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKA 595

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   E  +L+ +M   G + D    +T  D
Sbjct: 596 GFARETYELFYAMKEQGCVLDTHAYNTFID 625



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  L  +   RG  P +I YN I+       RL EA++ FE++      PN  T+ +
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNV 412

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G ++ A  +   M E G   NV+T + +ID   K++ +  A  ++E M    
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+ V++  LIDGL K+G +++A   +   LD+  +P+ V Y  LI+ + K GR  +  
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH 532

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +++  M+  G  PD  LL+   D
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMD 555



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 1/222 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +E  LDAAL L  ++    L  DI+ YN  I  +    ++D A + F ++    L P
Sbjct: 242 VFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLP 301

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I   CK  R+D+A  +F +M +         Y+ +I GY  +     A+ + 
Sbjct: 302 DDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLL 361

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E        P++++Y+ ++  L K+G + EAL  F   +     P++ TY +LI   CKA
Sbjct: 362 ERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFE-EMKKDAAPNLSTYNVLIDMLCKA 420

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G    A ++ D+M   G+ P+ + ++ + D   ++    E C
Sbjct: 421 GEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 97/198 (48%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F ++  RG  PD+   N  +          +   LFE++      P+ ++++ILI   
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +   +F  M E+G   +   Y+  IDG+ KS  +  A+ + EEM      P +
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A  N L  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 713 LMQKGLTPNVYTWNCLLD 730



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K    D   ++ G+++  G  P   T   +I      N+L E   L + +   + +P
Sbjct: 137 VMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRP 196

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
               +T LI A       D    +F +M E G + +V  ++ +I  + +   + +A  + 
Sbjct: 197 AFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLL 256

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  N +  +IV Y++ ID   K G ++ A   FH    + LLPD VTY  +I   CK 
Sbjct: 257 DEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKG 316

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            R  EA+++++ M +N  +P
Sbjct: 317 NRLDEAVEIFEQMEQNRNVP 336



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 90/198 (45%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L     L   +      P    Y T+I    S+   D  + LF ++  +  + + 
Sbjct: 174 IKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSV 233

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             FT +I  F +EGR+D A  +  +M      A++V Y+  ID + K+  +  A+  + E
Sbjct: 234 HLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHE 293

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +  + + P+ V+Y+ +I  LCK   ++EA+  F     N  +P    Y  +I GY  AG+
Sbjct: 294 IKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGK 353

Query: 183 PTEAMQLYDSMLRNGIMP 200
             EA  L +     G +P
Sbjct: 354 FDEAYSLLERQKARGCIP 371



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 51/109 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A   + ++  +GL+P+ ITY T+I G      + EA  LFE+       P+S ++  
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           +I+      R  +A  +F +   KG   +  T   L+D   K + ++ A
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L    KL   +  +G  P+ +TYNT+I G C   +LD+AV L E++   +  PN
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K+ R  DA  + S M E+G   N   YS LI G FK    + A  ++ 
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    PNIV YS+L+DGLC+ G   EA    +  + +  LP+  TY+ L++G+ K G
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA+Q++  M + G   +    S L D
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLID 475



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 108/193 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+     A++L   + +RG   +   Y+ +I G     + +EA+ L+ K+     KPN
Sbjct: 337 LVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +++L+D  C+EG+ ++A  + ++M+  G   N  TYS L+ G+FK+   + A  V++
Sbjct: 397 IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK 456

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +   S N   YS+LIDGLC  G ++EA+  +   L   + PD V Y+ +I+G C  G
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516

Query: 182 RPTEAMQLYDSML 194
               A++LY  ML
Sbjct: 517 SMDAALKLYHEML 529



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 3/220 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A+ L+ ++ ++G +P+I+ Y+ ++ G C   + +EA ++  ++      PN
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++ L+  F K G  ++A  ++ +M + G   N   YS LIDG      +K A  V+ 
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH---CALDNHLLPDVVTYAILIRGYC 178
           +M    I P+ V+YS +I GLC  G M+ AL  +H   C  +    PDVVTY IL+ G C
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
                + A+ L +SML  G  PD +  +T  +   + S S
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 102/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A+ L  ++   G  P  + YN +I G C    L    +L + +      PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C +G++D A  +  +M+      N VTY  LI+G  K +    A  +  
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E     N   YS+LI GL K G  EEA+  +    +    P++V Y++L+ G C+ G
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +P EA ++ + M+ +G +P+    S+L
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSL 438



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 95/175 (54%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P+ +++N +I   C L  +D A+++F  +   +  P+  T+  L+D  CKE R+D+A 
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           ++  +M  +G   + V Y+ LIDG  K  ++     + + M      PN V+Y+ LI GL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           C +G +++A+      + +  +P+ VTY  LI G  K  R T+A++L  SM   G
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 6/212 (2%)

Query: 5   ECHL-DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC----VQL 58
           + HL D A+ LF ++ D    +  + ++N+++    +       ++ ++ +      + +
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 183

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN ++F ++I A CK   +D A  +F  M E+    +  TY  L+DG  K + +  A  
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + +EM     SP+ V Y++LIDGLCK+G +               +P+ VTY  LI G C
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             G+  +A+ L + M+ +  +P+ +   TL +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 22/194 (11%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSI 63
            +  A+ ++ ++   G++PD + Y++II G C +  +D A++L+ ++ C +    +P+ +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF-KSQNMKSAFDVYEE 122
           T+ IL+D  C +  +  A  + + ML++G   +V+T +  ++    KS +        EE
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
                          L+  L KR  +  A       L  +L P   T+A+++R  CK  +
Sbjct: 602 ---------------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646

Query: 183 PTEAMQLYDSMLRN 196
              A+   D   RN
Sbjct: 647 INAAI---DKCWRN 657



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 5/187 (2%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T +++I  Y +    D   +L  ++          +F ++  A+ K    D A  +F +M
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 89  LEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN----ISPNIVSYSILIDGLC 143
           +++   K +V +++ +++            + Y+ +  +N    ISPN +S++++I  LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   ++ A+  F    +   LPD  TY  L+ G CK  R  EA+ L D M   G  P  +
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 204 LLSTLAD 210
           + + L D
Sbjct: 259 IYNVLID 265


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 115/210 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L  +  +  AL++   +T  G+  D + + T+I G+CS   L  A +LFE++    L  
Sbjct: 331 LLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAA 390

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T T LI+  C+ G + +A  +  +M++KG   +VVTY+ LIDGY K  NM  AF V+
Sbjct: 391 DRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVH 450

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    ++PN+V+Y+ L DGLCK+G +  A    H   +  L  +V TY  LI G CK 
Sbjct: 451 NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +AM++   M   G   D    +TL D
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLID 540



 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  A ++  ++ D+GL+ D++TY  +I GYC    + EA ++  ++   ++ PN
Sbjct: 402 LCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPN 461

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L D  CK+G +  A  +  +M  KG + NV TY+ LI+G  K  N++ A  +  
Sbjct: 462 VVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMT 521

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       ++ +Y+ LID LCK G  + A       LD  + P + TY +L+ G+C +G
Sbjct: 522 EMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG 581

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA-----DYNLQSS 216
           R     +L + ML   + P+ +  ++L      D N++S+
Sbjct: 582 RVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKST 621



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 109/197 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  + AA +L  ++ ++GLE ++ TYN++I G C    L++A+++  ++     + +
Sbjct: 472 LCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTD 531

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID  CK G  D A  M  +ML+KG K ++ TY+ L++G+  S  ++    + E
Sbjct: 532 VYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLE 591

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E N+ PN+V+Y+ L+   C    M+     +       + P+  TY ILI+G+CKA 
Sbjct: 592 WMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKAR 651

Query: 182 RPTEAMQLYDSMLRNGI 198
              EA+  +  M+  G+
Sbjct: 652 NMKEALYFHQEMIEKGL 668



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 108/186 (58%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TY T++ GYC    L+ AV+L +++    L+ N+  +T +I   C +G++ DA  +
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRV 344

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M   G   + V ++ +I G+    ++ +A  ++EEM +  ++ + V+++ LI+GLC+
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G ++EA       +D  L  DVVTY +LI GYCK G   EA ++++ M+   + P+ + 
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 205 LSTLAD 210
            + L+D
Sbjct: 465 YTALSD 470



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 109/191 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+KL  ++  +GLE +   Y ++I   C+  ++ +A+++ E +T   +  +++ FT 
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  FC +G +  A  +F +M ++G  A+ VT++ LI+G  ++  +K A  V +EM +  
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  ++V+Y++LIDG CKRG M EA    +  +   + P+VVTY  L  G CK G    A 
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482

Query: 188 QLYDSMLRNGI 198
           +L   M   G+
Sbjct: 483 ELLHEMCNKGL 493



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A+++  ++   G   D+ TY T+I   C     D A  + +++    +KP+
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +L++ FC  GR++    +   MLEK  + NVVTY+ L+  Y   +NMKS  ++Y+
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYK 626

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN  +Y+ILI G CK   M+EALY     ++  L     +Y+ LIR   K  
Sbjct: 627 GMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKK 686

Query: 182 RPTEAMQLYDSMLRNGIM--PD 201
           + +EA   +D M   G+   PD
Sbjct: 687 KFSEARVFFDKMRNEGLTAEPD 708



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  +L   GL P   + N ++    S   LDEA+ LF +L       N  +  IL+ A 
Sbjct: 214 ELLRRLRQYGLSPSPESCNAVL----SRLPLDEAIALFRELP----DKNVCSHNILLKAL 265

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
              GR+ DA   F +M       +VVTY  ++ GY     +++A  + +EM    +  N 
Sbjct: 266 LSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNA 322

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
             Y+ +I  LC +G + +AL        + +  D V +  +I G+C  G    A +L++ 
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 193 MLRNGIMPDGLLLSTL 208
           M + G+  D +  + L
Sbjct: 383 MQKRGLAADRVTHTAL 398



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++   KL   + ++ + P+++TYN+++  YC    +    ++++ +   ++ PN  T+ I
Sbjct: 583 VEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNI 642

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK   M +A     +M+EKG +    +YS LI    K +    A   +++M    
Sbjct: 643 LIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702

Query: 128 ISPNIVSYSILID 140
           ++     YS  +D
Sbjct: 703 LTAEPDVYSFYMD 715



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 60/119 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ +  +++  +  + + P+  TYN +I G+C    + EA+   +++    L+  + +++
Sbjct: 617 NMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYS 676

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LI    K+ +  +A + F KM  +G  A    YS  +D  F   N++S   + +E+ E
Sbjct: 677 ALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735


>gi|359493285|ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Vitis vinifera]
          Length = 993

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 110/196 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE HLD AL L   +  +G+  +I  YN++I G C    L +A +LF+ L  + L P
Sbjct: 648 VLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVP 707

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+  LID+ CKEG + DA  +F KM+ KG   NV  Y+ LIDGY K  NM+ A ++ 
Sbjct: 708 SEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLL 767

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            ++    I P+  + S LI+G C +G ME AL  F       +LPD + +  L+RG C  
Sbjct: 768 IDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAK 827

Query: 181 GRPTEAMQLYDSMLRN 196
           GR  EA  +   ML+ 
Sbjct: 828 GRMEEARGILREMLQT 843



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 112/205 (54%), Gaps = 5/205 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A++   ++ ++G+ PD ++Y  +I G+     +++A+   EK+    LKPN +
Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T ++  FCK+G++D+A  +F  +   G + +   Y  LIDG+    ++   F + E+M
Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDM 289

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISP+IV+Y+ +I+GLCK G   EA       +   +  D VT++ L+ GY +    
Sbjct: 290 EKRGISPSIVTYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENV 344

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
              ++    +  +G+  D ++ +T+
Sbjct: 345 KGILETKRRLEEDGVCIDLVMCNTI 369



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 7/184 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D++ Y++ ICGY     L EA++  +++    + P+++++TILID F +EG ++ A    
Sbjct: 157 DVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFL 216

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLCK 144
            KM + G K N+VTY+ ++ G+ K   +  A+ +++ M EN  I  +   Y  LIDG C 
Sbjct: 217 EKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFK-MVENLGIEVDEFMYVTLIDGFCT 275

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           RG ++             + P +VTY  +I G CKAGR +EA +     +  GI  D + 
Sbjct: 276 RGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADE-----VSKGIAGDAVT 330

Query: 205 LSTL 208
            STL
Sbjct: 331 FSTL 334



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 1/181 (0%)

Query: 31  NTIICGYCSLNRLDEAVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +++I G+C +++   AV  FE  +    L+PN  T T L+ A  + GR+ + + + S M 
Sbjct: 91  SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWME 150

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +    +VV YS  I GYF+   +  A   ++EM E  I+P+ VSY+ILIDG  + G +E
Sbjct: 151 REEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVE 210

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A+        + L P++VTY  ++ G+CK G+  EA  L+  +   GI  D  +  TL 
Sbjct: 211 KAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLI 270

Query: 210 D 210
           D
Sbjct: 271 D 271



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  LF  + + G+E D   Y T+I G+C+   +D    L E +    + P+ +
Sbjct: 240 KKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIV 299

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I+  CK GR  +A       + KG   + VT+S L+ GY + +N+K   +    +
Sbjct: 300 TYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRL 354

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E+ +  ++V  + +I  L   G +E+A YAF+  +    L+ D VTY  +I GYC+  R
Sbjct: 355 EEDGVCIDLVMCNTIIKALLMVGALEDA-YAFYKGMSGMDLVADSVTYCTMINGYCRVSR 413

Query: 183 PTEAMQLYDSMLRNGI 198
             EA++++D   +  I
Sbjct: 414 IEEALEIFDEFRKTSI 429



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +  R L P+I T   ++     L R+ E   L   +   +   + + ++  I  + +EG 
Sbjct: 114 VNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGV 173

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           + +A     +M+EKG   + V+Y+ LIDG+ +   ++ A    E+M ++ + PN+V+Y+ 
Sbjct: 174 LVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTA 233

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           ++ G CK+G ++EA   F    +  +  D   Y  LI G+C  G       L + M + G
Sbjct: 234 IMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRG 293

Query: 198 IMP 200
           I P
Sbjct: 294 ISP 296



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 79/146 (54%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + ++I+ID  CKEG +D A  + + + +KG   N+  Y+ +I+G  +   +  AF +++ 
Sbjct: 640 VDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDS 699

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + + ++ P+ ++Y+ LID LCK G + +A   F   +     P+V  Y  LI GYCK G 
Sbjct: 700 LEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGN 759

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA+ L   +    I PD   +S L
Sbjct: 760 MEEALNLLIDLKARCIKPDEFTVSAL 785



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 1/159 (0%)

Query: 53  LTCVQLKPNSITFTI-LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ 111
           LT +Q+  +++ F + ++ +  K GR+ DA  +     E  P  ++V YS +ID   K  
Sbjct: 594 LTNIQVNTSAVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEG 653

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           ++  A D+   + +  I+ NI +Y+ +I+GLC++G + +A   F       L+P  +TYA
Sbjct: 654 HLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYA 713

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI   CK G   +A QL++ M+  G  P+  + ++L D
Sbjct: 714 TLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLID 752



 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 7/187 (3%)

Query: 30  YNTIICGYC-SLNRLDEAVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++++I G C  L   ++A+ + +  LT + + P+S TF  LI +F  +G+M  A  +   
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 88  MLE---KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNIVSYSILIDGLC 143
           M     + P  N V+ S +I G+ K    + A   +E    + +  PNI + + L+  L 
Sbjct: 76  MTHDKVRYPFGNFVS-SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALF 134

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G + E             + DVV Y+  I GY + G   EA++ +  M+  GI PD +
Sbjct: 135 QLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTV 194

Query: 204 LLSTLAD 210
             + L D
Sbjct: 195 SYTILID 201



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 5/196 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E ++   L+   +L + G+  D++  NTII     +  L++A   ++ ++ + L  +S
Sbjct: 339 IEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADS 398

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +I+ +C+  R+++A  +F +   K   ++V  Y C+I G  +   +  A +V+ E
Sbjct: 399 VTYCTMINGYCRVSRIEEALEIFDE-FRKTSISSVSCYKCMIYGLCRKGMVDMAIEVFIE 457

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA--LDNHLLPDVVTYAILIRGYCKA 180
           + E  +     +Y+ LI    +    E  L   H    L       +   AI     CK 
Sbjct: 458 LNEKGLELVSGTYTSLIKASFEEQGAEGVLKFVHRIENLGREAFDTISNSAICF--LCKR 515

Query: 181 GRPTEAMQLYDSMLRN 196
           G    A ++Y  M R 
Sbjct: 516 GFSLAACEVYMRMRRK 531


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +L  ++  +G EP ++TY ++I G   ++RLDEA  LFE+    +++ N + ++ 
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F K GR+D+A ++  ++++KG   NV T++ L+D   K++ +  A   ++ M E  
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN V+Y ILI+GLCK     +A   +       + P  ++Y  +I G  KAG   EA 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 188 QLYDSMLRNGIMPD 201
            L+D    NG +PD
Sbjct: 783 ALFDRFKANGGVPD 796



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK    +   +LF  + ++G   D   YN +I G+C   ++++A QL E++     +P 
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +   K  + NVV YS LIDG+ K   +  A+ + E
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    +    P+ VTY ILI G CK  
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G+ P  +  +T+
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTM 768



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 101/201 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML +   LD A +L   +   GL P++ T N ++   C   +LDEA  +FE++      P
Sbjct: 386 MLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTP 445

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + ITF  LID   K GR+DDA  ++ KML+   + N + Y+ LI  +F     +    +Y
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M   N SP++   +  +D + K G  E+    F        +PD  +Y+ILI G  KA
Sbjct: 506 KDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKA 565

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   E  +L+ SM   G + D
Sbjct: 566 GFANETYELFYSMKEQGCVLD 586



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 1/219 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D+AL L  ++    L+ DI+ YN  I  +  + ++D A + F ++    LKP+ +
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I   CK  R+D+A  MF  + +         Y+ +I GY  +     A+ + E  
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++++Y+ ++  L K G ++EAL  F   +     P++ TY ILI   C+AG+ 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFE-EMKKDAAPNLSTYNILIDMLCRAGKL 393

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             A +L DSM + G+ P+   ++ + D   +S    E C
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  L  +   +G  P +I YN I+     + ++DEA+++FE++      PN  T+ I
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNI 382

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  C+ G++D A  +   M + G   NV T + ++D   KSQ +  A  ++E+M    
Sbjct: 383 LIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV 442

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+ +++  LIDGL K G +++A   +   LD+    + + Y  LI+ +   GR  +  
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++Y  M+     PD  LL+T  D
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMD 525



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 2/220 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   LD A+++F  L      P    YNT+I GY S  + DEA  L E+       P
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I +  ++    K G++D+A  +F +M +K    N+ TY+ LID   ++  +  AF++ 
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELR 400

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +  + PN+ + +I++D LCK   ++EA   F         PD +T+  LI G  K 
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKV 460

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           GR  +A ++Y+ ML +    + ++ ++L   N  + G +E
Sbjct: 461 GRVDDAYKIYEKMLDSDCRTNSIVYTSLIK-NFFNHGRKE 499



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L     +   +      P    Y T+I  + ++N  D  + LF+++  +  +P  
Sbjct: 144 VKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             FT LI  F KEGR+D A  +  +M      A++V Y+  ID + K   +  A+  + E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +  N + P+ V+Y+ +I  LCK   ++EA+  F     N  +P    Y  +I GY  AG+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323

Query: 183 PTEAMQLYDSMLRNGIMP 200
             EA  L +     G +P
Sbjct: 324 FDEAYSLLERQRAKGSIP 341



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 100/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++  + ++   PD+   NT +         ++   +FE++   +  P++ +++ILI   
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGL 562

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G  ++   +F  M E+G   +   Y+ +IDG+ K   +  A+ + EEM      P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    ++L D
Sbjct: 683 LMQKGLTPNVYTWNSLLD 700



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 97/194 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + DA  ++ G+++  G  P + T   ++      N+L E   + + +   + +P    +T
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYT 172

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI AF      D    +F +M E G +  V  ++ LI G+ K   + SA  + +EM  +
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++  +IV Y++ ID   K G ++ A   FH    N L PD VTY  +I   CKA R  EA
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 187 MQLYDSMLRNGIMP 200
           +++++ + +N  +P
Sbjct: 293 VEMFEHLEKNRRVP 306



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 74/150 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ AL  F  + +    P+ +TY  +I G C + + ++A   ++++    +KP+
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I++T +I    K G + +A  +F +    G   +   Y+ +I+G         AF ++E
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E     +  +  +  +L+D L K   +E+A
Sbjct: 822 ETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 8/174 (4%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV-- 97
           +NR  E  + +E+ T +   P S    +L+ A C+     D  +    +   GP  N   
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137

Query: 98  -VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            +  SC+     K+  ++  FDV + M +    P   +Y+ LI         +  L  F 
Sbjct: 138 EMVLSCV-----KANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +    P V  +  LIRG+ K GR   A+ L D M  + +  D +L +   D
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A  LF +    G  PD   YN +I G  + NR  +A  LFE+     L  +
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIH 831

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           + T  +L+D   K   ++ A ++ + + E G
Sbjct: 832 NKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 110/187 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL  F Q+T+ G  P ++++N II G C   RL +A+++F ++      PN +T++
Sbjct: 182 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 241

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK  ++D+A  +  +M+ +G + ++V Y+ L+ G+  +  + SA  +   M   
Sbjct: 242 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 301

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+Y+++ID LCK G +++A   F   + N   P+VVTY+ LI GYC+A R  E 
Sbjct: 302 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 361

Query: 187 MQLYDSM 193
            ++   M
Sbjct: 362 GKVMREM 368



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LDAA  +  +   R   PD++TYNT++     L R+DEA+  F ++T     P 
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  +I   C+  R+ DA  +F++M+++    N+VTYS +IDG  KS  +  A  + +
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ L+ G    G ++ AL      +    +PDVVTY ++I   CK G
Sbjct: 262 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 321

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A +++  ++ N   P+ +  S L
Sbjct: 322 RVDDAHEIFRELVANKCSPNVVTYSAL 348



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +DAA  LF ++   G   P+  TYN ++ G C  +RLD A  +  +       P
Sbjct: 106 LCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAP 165

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+ A  + GR+D+A   F++M E+G    +V+++ +I G  +++ +  A +V+
Sbjct: 166 DVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVF 225

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM + +  PN+V+YS++IDGLCK   ++EA       +     PD+V Y  L+ G+  A
Sbjct: 226 NEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAA 285

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR   A+ L   M+  G +PD +  + + D
Sbjct: 286 GRLDSALGLLRRMVSQGCIPDVVTYTVVID 315



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 3/201 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL++F ++ DR   P+++TY+ +I G C  ++LDEA QL +++     +P+
Sbjct: 212 LCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 271

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T L+  F   GR+D A  +  +M+ +G   +VVTY+ +ID   K   +  A +++ 
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  N  SPN+V+YS LI G C+   ++E         +    P+VVTY  +I G     
Sbjct: 332 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR---EMACRPNVVTYNTMIWGLSMVD 388

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           R  EA  ++  M   G +PD 
Sbjct: 389 RNEEAYGMFREMSECGFVPDA 409



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 37/231 (16%)

Query: 8   LDAALKLFGQLTDRGL------------------------------------EPDIITYN 31
           LDAA  L  ++   G+                                    +PD+++Y 
Sbjct: 41  LDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYT 100

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCV-QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           T+I G C L R+D A  LF K+      +PN+ T+  L+D  CK+ R+D A  + ++  +
Sbjct: 101 TLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARK 160

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           +    +VVTY+ L+   F+   +  A   + +M E    P +VS++ +I GLC+   + +
Sbjct: 161 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 220

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           AL  F+  +D    P++VTY+++I G CK+ +  EA QL D M+  G  PD
Sbjct: 221 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 271



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 3/175 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++   G  PD++ Y  ++ G+ +  RLD A+ L  ++      P+
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 306

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T++ID  CK GR+DDA  +F +++      NVVTYS LI GY ++  +     V  
Sbjct: 307 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM      PN+V+Y+ +I GL      EEA   F    +   +PD  TY  L R 
Sbjct: 367 EMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 418



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 9/218 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++    + AL+LF +     L    +TYN +I G+C+ + LD A  L  ++    ++ N
Sbjct: 1   MVRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             T +I++   C+ GR+  A   F   LE    + +VV+Y+ LI+G  K   + +AFD++
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 121 EEM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +M       PN  +Y+ L+DGLCK+  ++ A      A      PDVVTY  L+    +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            GR  EA+  +  M   G +P      TL  +N   +G
Sbjct: 180 LGRVDEALATFTQMTEEGYVP------TLVSFNAIITG 211


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 110/187 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL  F Q+T+ G  P ++++N II G C   RL +A+++F ++      PN +T++
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK  ++D+A  +  +M+ +G + ++V Y+ L+ G+  +  + SA  +   M   
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+Y+++ID LCK G +++A   F   + N   P+VVTY+ LI GYC+A R  E 
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 311

Query: 187 MQLYDSM 193
            ++   M
Sbjct: 312 GKVMREM 318



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 110/196 (56%), Gaps = 7/196 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKPNSITF 65
           H DA+L+L         +PD+++Y T+I G C L R+D A  LF K+      +PN+ T+
Sbjct: 32  HFDASLELAHA------QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTY 85

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             L+D  CK+ R+D A  + ++  ++    +VVTY+ L+   F+   +  A   + +M E
Sbjct: 86  NALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 145

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P +VS++ +I GLC+   + +AL  F+  +D    P++VTY+++I G CK+ +  E
Sbjct: 146 EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDE 205

Query: 186 AMQLYDSMLRNGIMPD 201
           A QL D M+  G  PD
Sbjct: 206 AQQLLDRMVSEGCRPD 221



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LDAA  +  +   R   PD++TYNT++     L R+DEA+  F ++T     P 
Sbjct: 92  LCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 151

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  +I   C+  R+ DA  +F++M+++    N+VTYS +IDG  KS  +  A  + +
Sbjct: 152 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 211

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ L+ G    G ++ AL      +    +PDVVTY ++I   CK G
Sbjct: 212 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 271

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A +++  ++ N   P+ +  S L
Sbjct: 272 RVDDAHEIFRELVANKCSPNVVTYSAL 298



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +DAA  LF ++   G   P+  TYN ++ G C  +RLD A  +  +       P
Sbjct: 56  LCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAP 115

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+ A  + GR+D+A   F++M E+G    +V+++ +I G  +++ +  A +V+
Sbjct: 116 DVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVF 175

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM + +  PN+V+YS++IDGLCK   ++EA       +     PD+V Y  L+ G+  A
Sbjct: 176 NEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAA 235

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR   A+ L   M+  G +PD +  + + D
Sbjct: 236 GRLDSALGLLRRMVSQGCIPDVVTYTVVID 265



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 3/201 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  AL++F ++ DR   P+++TY+ +I G C  ++LDEA QL +++     +P+
Sbjct: 162 LCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 221

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T L+  F   GR+D A  +  +M+ +G   +VVTY+ +ID   K   +  A +++ 
Sbjct: 222 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 281

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  N  SPN+V+YS LI G C+   ++E         +    P+VVTY  +I G     
Sbjct: 282 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR---EMACRPNVVTYNTMIWGLSMVD 338

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           R  EA  ++  M   G +PD 
Sbjct: 339 RNEEAYGMFREMSECGFVPDA 359



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 3/175 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++   G  PD++ Y  ++ G+ +  RLD A+ L  ++      P+
Sbjct: 197 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T++ID  CK GR+DDA  +F +++      NVVTYS LI GY ++  +     V  
Sbjct: 257 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 316

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM      PN+V+Y+ +I GL      EEA   F    +   +PD  TY  L R 
Sbjct: 317 EMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 368



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 8/159 (5%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           N  T +I++   C+ GR+  A   F   LE    + +VV+Y+ LI+G  K   + +AFD+
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 120 YEEM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + +M       PN  +Y+ L+DGLCK+  ++ A      A      PDVVTY  L+    
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + GR  EA+  +  M   G +P      TL  +N   +G
Sbjct: 129 QLGRVDEALATFTQMTEEGYVP------TLVSFNAIITG 161


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P  +++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD A  +F++ML+ G   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A           L PD VTY  LI G CK G  
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D A +LF ++    L PN 
Sbjct: 182 IRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ V+Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + VTY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVWTGSKLMKEMQRDGYVP 414



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P +++F  L++ + + G +D+ 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G + +V TYS LI+G  K   M  A +++ EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLAD 210
            +  +TL D
Sbjct: 311 KVTYTTLID 319



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD +TY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYVPSVVT 418



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 91/185 (49%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +      + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
              LE G  A++  ++ L+  + K   +K A  V++ + +  + P  VS++ L++G  + 
Sbjct: 125 EDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + + PDV TY++LI G CK  +   A +L++ ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 2/207 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  L  ++   G+ P   TYNT++  Y  L  + +A  + E +T    +P+  T+ +
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           L    C+ G++D+A  +  +M + G    +VVTY+ L+D  FK Q    A ++ EEM E 
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  ++V+++I++ GLC+ G +EEAL       +  L PDV+TY  LI   CKAG   +A
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKA 439

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNL 213
             L D M+R+G+  D   L+TL  YNL
Sbjct: 440 FVLMDEMVRSGLKMDTFTLNTLL-YNL 465



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+ AL     +T+ GL PD+ITYNT+I   C    + +A  L +++    LK +
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T   L+   CKE R ++A  +     ++G   + V+Y  ++  YFK    + A  +++
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWD 514

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++P+I +Y+ LI GL   G + EA+   +  ++  L+PD  TY I+I  YCK G
Sbjct: 515 EMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEG 574

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A Q ++ M+ N   PD +  +TL
Sbjct: 575 DLEKAFQFHNKMVENSFKPDVVTCNTL 601



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 105/195 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            KE   + AL L+ ++  R L P I TYNT+I G  ++ +L EA+    +L  + L P+ 
Sbjct: 501 FKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDD 560

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ I+I A+CKEG ++ A    +KM+E   K +VVT + L++G      ++ A  ++E 
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFES 620

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E     ++++Y+ LI  LCK   ++ AL  F       L PDV TY +L+    +AGR
Sbjct: 621 WVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGR 680

Query: 183 PTEAMQLYDSMLRNG 197
             EA ++   +  +G
Sbjct: 681 SVEAQKMLHKLNESG 695



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 1/194 (0%)

Query: 8   LDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A KL  ++   G+  PD++TYNT++       R  +A+ L E++    +K + +T  
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++   C+EG++++A      M E+G   +V+TY+ LID   K+ N+  AF + +EM  +
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS 449

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  +  + + L+  LCK    EEA            +PD V+Y  ++  Y K  +P  A
Sbjct: 450 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509

Query: 187 MQLYDSMLRNGIMP 200
           + L+D M++  + P
Sbjct: 510 LCLWDEMIKRKLTP 523



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A +L      RG  PD ++Y T++  Y    + + A+ L++++   +L P+
Sbjct: 465 LCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS 524

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI      G++ +A    ++++E G   +  TY+ +I  Y K  +++ AF  + 
Sbjct: 525 ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 584

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M EN+  P++V+ + L++GLC  G +E+A+  F   ++     DV+TY  LI+  CK  
Sbjct: 585 KMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDN 644

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
               A++ +  M   G+ PD     +LLS L++
Sbjct: 645 DVDTALRFFADMEVRGLQPDVFTYNVLLSALSE 677



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A+L  F  L    L P+  T+N ++  +CS   L +A+    K+    L P+++T+  L+
Sbjct: 192 ASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLL 251

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +A C++G + +A  + ++M ++G      TY+ L+  Y +   +K A DV E M      
Sbjct: 252 NAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFE 311

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----PDVVTYAILIRGYCKAGRPTE 185
           P++ +Y++L  GLC+ G ++E   AF    +   L    PDVVTY  L+    K  R ++
Sbjct: 312 PDLWTYNVLAAGLCQAGKVDE---AFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A+ L + M   G+       S+L  +N+   G
Sbjct: 369 ALNLLEEMREKGVK------SSLVTHNIIVKG 394



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 36/251 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+    +L + GL PD  TYN II  YC    L++A Q   K+     KP+ +T   
Sbjct: 541 LTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNT 600

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C  GR++ A  +F   +EKG K +V+TY+ LI    K  ++ +A   + +M    
Sbjct: 601 LMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG 660

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHC---------------------ALDNHLLPD 166
           + P++ +Y++L+  L + G   EA    H                      A++    P+
Sbjct: 661 LQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPE 720

Query: 167 VVT---------------YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           V +               Y   I+  C  G+  EA  + D M++ G+  D     TL + 
Sbjct: 721 VKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEG 780

Query: 212 NLQSSGSQEHC 222
            ++    Q H 
Sbjct: 781 LIKRQKRQTHA 791



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           S + +++ D +  +    + PN  ++++L+   C +G + +AL          L PD VT
Sbjct: 187 STSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVT 246

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           Y  L+  +C+ G   EA  L   M + GI+P      T A YN
Sbjct: 247 YNTLLNAHCRKGMLGEARTLLARMKKEGIVP------TRATYN 283



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 36/150 (24%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----------LNRLDEAVQLFE 51
           L K+  +D AL+ F  +  RGL+PD+ TYN ++               L++L+E+ +L+ 
Sbjct: 640 LCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYG 699

Query: 52  KLTCVQLKP--------------------------NSITFTILIDAFCKEGRMDDATMMF 85
           +     +K                           +  ++   I   C  G++ +A  + 
Sbjct: 700 RFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVL 759

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
            +M++KG   +  TY  L++G  K Q  ++
Sbjct: 760 DEMMQKGMSVDNSTYITLMEGLIKRQKRQT 789


>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 110/196 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE HLD AL L   +  +G+  +I  YN++I G C    L +A +LF+ L  + L P
Sbjct: 503 VLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVP 562

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + IT+  LID+ CKEG + DA  +F KM+ KG   NV  Y+ LIDGY K  NM+ A ++ 
Sbjct: 563 SEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLL 622

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            ++    I P+  + S LI+G C +G ME AL  F       +LPD + +  L+RG C  
Sbjct: 623 IDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAK 682

Query: 181 GRPTEAMQLYDSMLRN 196
           GR  EA  +   ML+ 
Sbjct: 683 GRMEEARGILREMLQT 698



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 112/205 (54%), Gaps = 5/205 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  L  A++   ++ ++G+ PD ++Y  +I G+     +++A+   EK+    LKPN +
Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T ++  FCK+G++D+A  +F  +   G + +   Y  LIDG+    ++   F + E+M
Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDM 289

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISP+IV+Y+ +I+GLCK G   EA       +   +  D VT++ L+ GY +    
Sbjct: 290 EKRGISPSIVTYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENV 344

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
              ++    +  +G+  D ++ +T+
Sbjct: 345 KGILETKRRLEEDGVCIDLVMCNTI 369



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 7/184 (3%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D++ Y++ ICGY     L EA++  +++    + P+++++TILID F +EG ++ A    
Sbjct: 157 DVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFL 216

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILIDGLCK 144
            KM + G K N+VTY+ ++ G+ K   +  A+ +++ M EN  I  +   Y  LIDG C 
Sbjct: 217 EKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFK-MVENLGIEVDEFMYVTLIDGFCT 275

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           RG ++             + P +VTY  +I G CKAGR +EA +     +  GI  D + 
Sbjct: 276 RGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADE-----VSKGIAGDAVT 330

Query: 205 LSTL 208
            STL
Sbjct: 331 FSTL 334



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 1/181 (0%)

Query: 31  NTIICGYCSLNRLDEAVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +++I G+C +++   AV  FE  +    L+PN  T T L+ A  + GR+ + + + S M 
Sbjct: 91  SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWME 150

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +    +VV YS  I GYF+   +  A   ++EM E  I+P+ VSY+ILIDG  + G +E
Sbjct: 151 REEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVE 210

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A+        + L P++VTY  ++ G+CK G+  EA  L+  +   GI  D  +  TL 
Sbjct: 211 KAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLI 270

Query: 210 D 210
           D
Sbjct: 271 D 271



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  LF  + + G+E D   Y T+I G+C+   +D    L E +    + P+ +
Sbjct: 240 KKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIV 299

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I+  CK GR  +A       + KG   + VT+S L+ GY + +N+K   +    +
Sbjct: 300 TYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRL 354

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E+ +  ++V  + +I  L   G +E+A YAF+  +    L+ D VTY  +I GYC+  R
Sbjct: 355 EEDGVCIDLVMCNTIIKALLMVGALEDA-YAFYKGMSGMDLVADSVTYCTMINGYCRVSR 413

Query: 183 PTEAMQLYDSMLRNGI 198
             EA++++D   +  I
Sbjct: 414 IEEALEIFDEFRKTSI 429



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 26/229 (11%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL--------- 58
           L+ A   +  ++   L  D +TY T+I GYC ++R++EA+++F++     +         
Sbjct: 379 LEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQ 438

Query: 59  --------------KPNSITFTI---LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
                         +  +IT      ++ +  K GR+ DA  +     E  P  ++V YS
Sbjct: 439 EGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYS 498

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +ID   K  ++  A D+   + +  I+ NI +Y+ +I+GLC++G + +A   F      
Sbjct: 499 IMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKI 558

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+P  +TYA LI   CK G   +A QL++ M+  G  P+  + ++L D
Sbjct: 559 DLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLID 607



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +  R L P+I T   ++     L R+ E   L   +   +   + + ++  I  + +EG 
Sbjct: 114 VNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGV 173

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           + +A     +M+EKG   + V+Y+ LIDG+ +   ++ A    E+M ++ + PN+V+Y+ 
Sbjct: 174 LVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTA 233

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           ++ G CK+G ++EA   F    +  +  D   Y  LI G+C  G       L + M + G
Sbjct: 234 IMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRG 293

Query: 198 IMP 200
           I P
Sbjct: 294 ISP 296



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + ++I+ID  CKEG +D A  + + + +KG   N+  Y+ +I+G  +   +  AF +++ 
Sbjct: 495 VDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDS 554

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + + ++ P+ ++Y+ LID LCK G + +A   F   +     P+V  Y  LI GYCK G 
Sbjct: 555 LEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGN 614

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA+ L   +    I PD   +S L +
Sbjct: 615 MEEALNLLIDLKARCIKPDEFTVSALIN 642



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 114/236 (48%), Gaps = 30/236 (12%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E ++   L+   +L + G+  D++  NTII     +  L++A   ++ ++ + L  +S
Sbjct: 339 IEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADS 398

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF----------KSQN 112
           +T+  +I+ +C+  R+++A  +F +  +    +  + +  + +G+F          + + 
Sbjct: 399 VTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFF--VQEGFFPGCMRSIHENEKET 456

Query: 113 MKSAF---------------DVYEEMC---ENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           +  AF               D Y+ +    EN    ++V YSI+ID LCK G +++AL  
Sbjct: 457 ITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDL 516

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                   +  ++  Y  +I G C+ G   +A +L+DS+ +  ++P  +  +TL D
Sbjct: 517 CAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLID 572



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 7/187 (3%)

Query: 30  YNTIICGYC-SLNRLDEAVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           ++++I G C  L   ++A+ + +  LT + + P+S TF  LI +F  +G+M  A  +   
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 88  MLE---KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNIVSYSILIDGLC 143
           M     + P  N V+ S +I G+ K    + A   +E    + +  PNI + + L+  L 
Sbjct: 76  MTHDKVRYPFGNFVS-SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALF 134

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G + E             + DVV Y+  I GY + G   EA++ +  M+  GI PD +
Sbjct: 135 QLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTV 194

Query: 204 LLSTLAD 210
             + L D
Sbjct: 195 SYTILID 201


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A + F ++  +GL  D +TY T+I G C    L EA ++ +++   +L  + +T+T+
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D +CK G+M +A  + + M+++G   NVVTY+ L DG  K  ++++A ++  EM    
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N  +Y+ LI+GLCK G +++A+          L PDV TY  LI   CK+G    A 
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            L   ML NGI P      T+  YN+  +G
Sbjct: 560 DLLQEMLDNGIKP------TIVTYNVLMNG 583



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 116/203 (57%), Gaps = 3/203 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +LF ++      PD++TY  +I GYC+L  L+ AV+L + +    ++PN+  +T 
Sbjct: 278 VEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTS 334

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C +GR+ DA  +   M+      +   Y+ ++ G+    ++ SA   ++EM    
Sbjct: 335 VVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKG 394

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++ + V+Y+ LI+GLC+ G ++EA       L   L  D VTY +L+ GYCK G+  EA 
Sbjct: 395 LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAF 454

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           Q++++M++ G+ P+ +  + L+D
Sbjct: 455 QVHNTMVQRGVAPNVVTYTALSD 477



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 109/212 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +LD A++    +   GL+PD+ TY T+I   C    LD A  L +++    +KP 
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +L++ FC  GR++    +   MLEK    N  TY+ L+  Y    NMKS  ++Y+
Sbjct: 574 IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYK 633

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            MC  N+ PN  +Y+ILI G CK   M+EA Y  +  ++        +Y+ LIR   K  
Sbjct: 634 GMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKK 693

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           +  EA +L+  M + G   +  + +   D+N 
Sbjct: 694 KFVEARKLFHDMRKEGFTAEPDVYNFYIDFNF 725



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 108/197 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  + AA +L  +++++GLE +  TYN++I G C    LD+A++    +    LKP+
Sbjct: 479 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPD 538

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LIDA CK G +D A  +  +ML+ G K  +VTY+ L++G+  S  ++    + E
Sbjct: 539 VYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E NI PN  +Y+ L+   C    M+     +      ++ P+  TY ILI+G+CKA 
Sbjct: 599 WMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKAR 658

Query: 182 RPTEAMQLYDSMLRNGI 198
              EA   ++ M+  G 
Sbjct: 659 SMKEAQYFHNEMIEKGF 675



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 100/185 (54%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D   Y T++ G+C+   L  A + F+++    L  + +T+T LI+  C+ G + +A  + 
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +ML +    + VTY+ L+DGY K   M  AF V+  M +  ++PN+V+Y+ L DGLCK+
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++ A    H   +  L  +  TY  LI G CKAG   +AM+    M   G+ PD    
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542

Query: 206 STLAD 210
           +TL D
Sbjct: 543 TTLID 547



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 100/191 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+KL   +  RG+EP+   Y +++   C   R+ +A+ + E +   ++  +   +T 
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  FC +G +  A   F +M  KG   + VTY+ LI+G  ++  +K A  V +EM    
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  + V+Y++L+DG CKRG M EA    +  +   + P+VVTY  L  G CK G    A 
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 188 QLYDSMLRNGI 198
           +L   M   G+
Sbjct: 490 ELLHEMSNKGL 500



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++   +  RG+ P+++TY  +  G C    +  A +L  +++   L+ N+ 
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+  CK G +D A    + M   G K +V TY+ LID   KS  +  A D+ +EM
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N I P IV+Y++L++G C  G +E         L+ ++ P+  TY  L++ YC     
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 184 TEAMQLYDSMLRNGIMPD 201
               ++Y  M    + P+
Sbjct: 626 KSTTEIYKGMCSRNVEPN 643



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 11/195 (5%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++   G+ P     N ++    S   LDEA++LF+ L       N  ++ IL+   C
Sbjct: 222 LLRRVRQYGISPSPEACNAVL----SRLPLDEAIELFQGLP----DKNVCSYNILLKVLC 273

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             GR++DA  +F +M       +VVTY  LI GY     +++A  + ++M    + PN  
Sbjct: 274 GAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            Y+ ++  LC +G + +AL      + + ++ D   Y  ++ G+C  G    A + +D M
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 194 LRNGIMPDGLLLSTL 208
            R G+  DG+  +TL
Sbjct: 391 QRKGLATDGVTYTTL 405



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 59/121 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + +  +++  +  R +EP+  TYN +I G+C    + EA     ++     +  + +++ 
Sbjct: 625 MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSA 684

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K+ +  +A  +F  M ++G  A    Y+  ID  F   N+++   + +E+ E +
Sbjct: 685 LIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEAS 744

Query: 128 I 128
           I
Sbjct: 745 I 745


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+    AA  L  ++ D  L+PD   Y T++ G+   N LD+A +LFE +    + P 
Sbjct: 460 LCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPG 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + ++I   CK G+M DA    +KM       +  T+S +IDGY K  ++ SA  ++ 
Sbjct: 520 VVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFG 579

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    PN+V+Y+ LI+G CK   M  A   F      +L P+VVTY ILI G+ K G
Sbjct: 580 QMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTG 639

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P +A   ++ ML N  +P+
Sbjct: 640 KPEKAASFFELMLMNNCLPN 659



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 97/175 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+   LD A +LF  +  +G++P ++ YN +I G C   ++ +AV    K+      P+
Sbjct: 495 FIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPD 554

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T + +ID + K+  +D A  MF +M+++  K NVV Y+ LI+G+ K  +M  A  V+ 
Sbjct: 555 EYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFR 614

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            M   N+ PN+V+Y+ILI G  K G  E+A   F   L N+ LP+  T+  LI G
Sbjct: 615 AMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLING 669



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 102/193 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++   +T+ G EPDI TYN +I   CS  R+ EA +  E+     L PN  ++T 
Sbjct: 326 VDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTP 385

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A+CK+G    A+ M  K+ E G K ++V+Y   I G      +  A  V E+M E  
Sbjct: 386 LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+   Y++L+ GLCK+G    A       LD +L PD   YA L+ G+ +     +A 
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKAT 505

Query: 188 QLYDSMLRNGIMP 200
           +L++ ++  GI P
Sbjct: 506 ELFEVVMSKGIDP 518



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 108/195 (55%), Gaps = 2/195 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G +PD+++Y   I G  +   +D A+ + EK+    + P++  + +L+   CK+G
Sbjct: 405 KIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKG 464

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R   A ++ S+ML+   + +   Y+ L+DG+ ++  +  A +++E +    I P +V Y+
Sbjct: 465 RFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYN 524

Query: 137 ILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           ++I GLCK G M +A+ Y     + NH  PD  T++ +I GY K      A++++  M++
Sbjct: 525 VMIKGLCKCGKMTDAVSYVNKMKIANH-APDEYTHSTVIDGYVKQHDLDSALKMFGQMMK 583

Query: 196 NGIMPDGLLLSTLAD 210
               P+ +  ++L +
Sbjct: 584 QKYKPNVVAYTSLIN 598



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 98/195 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL +  ++ ++G+ PD   YN ++ G C   R   A  L  ++  + L+P++  + 
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA 489

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D F +   +D AT +F  ++ KG    VV Y+ +I G  K   M  A     +M   
Sbjct: 490 TLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIA 549

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N +P+  ++S +IDG  K+  ++ AL  F   +     P+VV Y  LI G+CK    + A
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRA 609

Query: 187 MQLYDSMLRNGIMPD 201
            +++ +M    + P+
Sbjct: 610 EKVFRAMQSFNLEPN 624



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 12/195 (6%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  LD+ALK+FGQ+  +  +P+++ Y ++I G+C +  +  A ++F  +    L+PN 
Sbjct: 566 VKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNV 625

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF-----------KSQ 111
           +T+TILI  F K G+ + A   F  ML      N  T+  LI+G               +
Sbjct: 626 VTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEE 685

Query: 112 NMKS-AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
           N +S   D +  M     S  I +Y+ +I  LCK G+++ A       L    L D V +
Sbjct: 686 NDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCF 745

Query: 171 AILIRGYCKAGRPTE 185
           + L+ G C+ G+  E
Sbjct: 746 SALLHGLCQTGKSKE 760



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 91/194 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++   KL       G  P+++ YN II GYC    L  A ++FE+L      P   T+  
Sbjct: 221 VEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGA 280

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK G+      + ++M   G   NV  ++ +ID  +K   +  A ++   M E  
Sbjct: 281 LIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMG 340

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+I +Y+ILI+  C  G ++EA      A +  LLP+  +Y  L+  YCK G    A 
Sbjct: 341 CEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMAS 400

Query: 188 QLYDSMLRNGIMPD 201
            +   +   G  PD
Sbjct: 401 DMLFKIAETGDKPD 414



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 26/234 (11%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A ++F +L  +G  P + TY  +I G+C   +     QL  ++  + L  N  
Sbjct: 252 KKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVK 311

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  +IDA  K G +D A  M   M E G + ++ TY+ LI+       +K A +  E  
Sbjct: 312 VFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERA 371

Query: 124 CENNISPNIVSYSILIDGLCKRG---LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E  + PN  SY+ L+   CK+G   +  + L+      D    PD+V+Y   I G    
Sbjct: 372 KERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK---PDLVSYGAFIHGSVAG 428

Query: 181 GRPTEAMQLYDSMLRNGIMPDG--------------------LLLSTLADYNLQ 214
           G    A+ + + M+  G+ PD                     LLLS + D NLQ
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQ 482



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 12/208 (5%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD  T++T+I GY   + LD A+++F ++   + KPN + +T LI+ FCK   M  A  +
Sbjct: 553 PDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKV 612

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M     + NVVTY+ LI G+ K+   + A   +E M  NN  PN  ++  LI+GL  
Sbjct: 613 FRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTN 672

Query: 145 RG----LMEE--------ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
                 L+E+         L  F   +       + TY  +I   CK G    A  L   
Sbjct: 673 ITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTK 732

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           MLR G + D +  S L     Q+  S+E
Sbjct: 733 MLRKGFLMDSVCFSALLHGLCQTGKSKE 760



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 94/198 (47%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  ++   GL  ++  +N+II        +D+A ++   +T +  +P+  T+ ILI+  
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFS 355

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C  GR+ +A     +  E+    N  +Y+ L+  Y K  +   A D+  ++ E    P++
Sbjct: 356 CSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDL 415

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           VSY   I G    G ++ AL      ++  + PD   Y +L+ G CK GR   A  L   
Sbjct: 416 VSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSE 475

Query: 193 MLRNGIMPDGLLLSTLAD 210
           ML   + PD  + +TL D
Sbjct: 476 MLDLNLQPDAYMYATLVD 493



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 13/203 (6%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFTILIDAFC 73
           + +R  +P +   N++IC Y     +D+AV++F    E   C    P  +    L++   
Sbjct: 119 MKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCF---PCVVANNSLLNCLV 175

Query: 74  KEGRMDDATMMFSKMLEKGPKAN----VVTYSCLI--DGYFKSQNMKSAFDVYEEMCENN 127
           K G++D A  ++ KMLE+G        V  YS +I   G      ++    + ++   N 
Sbjct: 176 KNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNG 235

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+++IDG CK+G ++ A   F        LP + TY  LI G+CKAG+     
Sbjct: 236 CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVD 295

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           QL + M   G+  +  + +++ D
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIID 318



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 39/97 (40%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L  F  +   G    I TYN+II   C    +D A  L  K+       +S+ F+ L+  
Sbjct: 692 LDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHG 751

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            C+ G+  +   + S  L K        YS  +D Y 
Sbjct: 752 LCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYL 788


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 1/196 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A  LF ++      PD++TYNT++   C   R++E  +LFE +      PN ITF+
Sbjct: 200 QLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFS 259

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C+ G ++ A  +F  MLE G K N  TY+ LI G  +++ +  A +++E+M + 
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            I P+ V+Y+ LI G CKRG M+EA   +   +    L P +VT+  LI G+CK G+   
Sbjct: 320 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 379

Query: 186 AMQLYDSMLRNGIMPD 201
           A +L   M   G+  D
Sbjct: 380 ANELVAEMGTKGLAAD 395



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A + F Q+   G +P++  YN ++ G CS  +L++A  LF ++      P+ +T+  L+D
Sbjct: 169 ASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK  R+++   +F  M   G   NV+T+S LI G  ++  ++ A +V+  M E    P
Sbjct: 229 AVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 288

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+ LI GLC+   + +A   F       + PD V Y  LI GYCK G   EA +LY
Sbjct: 289 NKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348

Query: 191 DSMLRN-GIMPDGLLLSTLAD 210
             M    G+ P  +  +TL D
Sbjct: 349 REMSGGAGLQPTIVTFNTLID 369



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD +LK+  ++  RG  P +  Y++++       R+D A  LF+++      P+
Sbjct: 90  LAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPD 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  LI   C+ G++ DA+  F +M + G + NV  Y+ L+ G   S  ++ A  ++ 
Sbjct: 150 RLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFA 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  ++ SP++V+Y+ L+D +CK   +EE    F        +P+V+T++ LI G C+ G
Sbjct: 210 EMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG 269

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A++++ SML  G  P+    +TL
Sbjct: 270 ELEKALEVFGSMLEAGCKPNKYTYTTL 296



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  LF ++   G  PD + +  +I G C   ++ +A + F+++     +PN
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + +L+   C  G+++ A  +F++M       +VVTY+ L+D   K++ ++    ++E
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFE 244

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN++++S LI GLC+ G +E+AL  F   L+    P+  TY  LI G C+A 
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A +L++ M +  I PD +  ++L
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSL 331



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L+ AL++FG + + G +P+  TY T+I G C   ++ +A +LFEK+T   + P+
Sbjct: 265 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++ +  LI  +CK G MD+A  ++ +M    G +  +VT++ LIDG+ K   +  A ++ 
Sbjct: 325 AVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV 384

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM    ++ +  +Y ILI GL +   ++EAL  +    +   L D V+    + G CK 
Sbjct: 385 AEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 444

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A  ++++  ++G +P+      L++
Sbjct: 445 GNIDQAYAVFEATRKSGAVPNPETFRILSE 474



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 113/202 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A +++  + + G +PD ++Y+ +I G   + +LDE++++  ++      P+   ++
Sbjct: 60  NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+ A  K  R+D A+ +F +M+  G   + + +  LI G  ++  +K A + +++M ++
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+  Y++L+ GLC  G +E+A   F     +   PDVVTY  L+   CKA R  E 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L+++M   G +P+ +  STL
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTL 261



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 1/182 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTILI 69
           A +LF ++T   + PD + YN++I GYC    +DEA +L+ +++    L+P  +TF  LI
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D FCK G++  A  + ++M  KG  A+  TY  LI G  ++  +  A +VY++M E    
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            + VS    + GLCK G +++A   F     +  +P+  T+ IL     K GR  +A +L
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488

Query: 190 YD 191
            +
Sbjct: 489 ME 490



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 1/199 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   KLF  +   G  P++IT++T+I G C    L++A+++F  +     KPN  
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 291

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   C+  ++  A  +F KM +     + V Y+ LI GY K  +M  A  +Y EM
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351

Query: 124 CEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
                + P IV+++ LIDG CK G +  A           L  D  TY ILI G  +A +
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATK 411

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA+++Y  M     + D
Sbjct: 412 LDEALEVYKQMREKKFLLD 430



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 117/221 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE   + + K+  ++   G  PD+  +N ++ G+   N +++A ++++ +     KP+
Sbjct: 20  LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++ ILI    K G++D++  + S+M+ +G   ++  YS L+    K++ +  A  +++
Sbjct: 80  NVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFD 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ + +  LI GLC+ G +++A   F     +   P+V  Y +L+ G C +G
Sbjct: 140 EMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSG 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           +  +A  L+  M  +   PD +  +TL D   ++   +E C
Sbjct: 200 QLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 1/204 (0%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D+ +  ++ TY++II       + +E+ ++ E++      P+   F  ++  F +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           M+ A  ++  M+E G K + V+Y  LI G  K   +  +  +  EM     +P++ +YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+  L K   ++ A   F   +     PD + +  LI G C+AG+  +A + +  M ++G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 198 IMPDGLLLSTLADYNLQSSGSQEH 221
             P+  + + L  + L SSG  E 
Sbjct: 181 CQPNVPVYNVLL-HGLCSSGQLEQ 203



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 56/122 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A +L  ++  +GL  D  TY  +I G     +LDEA+++++++   +   + ++   
Sbjct: 377 LGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVS 436

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            +   CK G +D A  +F    + G   N  T+  L +   K   ++ A  + E     +
Sbjct: 437 FVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 496

Query: 128 IS 129
           I+
Sbjct: 497 IT 498



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   LD AL+++ Q+ ++    D ++  + + G C    +D+A  +FE        PN
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465

Query: 62  SITFTILIDAFCKEGRMDDA 81
             TF IL ++  K GR++DA
Sbjct: 466 PETFRILSESLIKLGRVEDA 485


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 274 LSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M+   I  D +  + L
Sbjct: 334 BTAFEHRXRMIEENIRLDDVAYTAL 358



 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 113/200 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C   ++D+A +LF+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNX 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+  E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G ++ A       ++ ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
             +A ++   ML  G+ PD 
Sbjct: 368 XVDAEKMLRXMLSVGLKPDA 387



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 119/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  N+ +AF+   
Sbjct: 282 LITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRX 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L   M   G+ PD +  +TL D
Sbjct: 297 DLKQANDLIXEMSMKGLKPDKITYTTLID 325



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  Y+E+
Sbjct: 74  VFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEI 133

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 134 LECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            E  +L  +M  +G+ PD    S L +
Sbjct: 194 DEGFRLKSAMXASGVQPDVYTYSVLIN 220


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 107/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G+  D +TYN +I G C    L++A  L  K+    L+P+ IT+T LI 
Sbjct: 502 AFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIH 561

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+ G + +A   F  M+  G   + VTY+  I  Y +  N+ SA+  + +M E  + P
Sbjct: 562 AHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEP 621

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y++LI  LC+ G  + A   FH  L+  L+P+  TY +LI G CK G   +AM+ Y
Sbjct: 622 NEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFY 681

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M +NGI PD L    L
Sbjct: 682 FEMHQNGIHPDYLTHKAL 699



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 35/237 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   ++AA   F ++   GL+PD+ITYN+++ GYC    L EA+ LF  L    L P 
Sbjct: 353 LLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPT 412

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILID +C+ G +++A  +  +M+E+G   +V TY+ L+ G   + ++  A + ++
Sbjct: 413 VLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFD 472

Query: 122 EMCENNISP-----------------------------------NIVSYSILIDGLCKRG 146
           EM    + P                                   + V+Y+ILIDGLCK G
Sbjct: 473 EMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTG 532

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            + +A       + N L PD +TY  LI  +C+ G   EA + +  M+ +G+ P  +
Sbjct: 533 NLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAV 589



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 99/176 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A  L  ++   GL+PD ITY  +I  +C    L EA + F+ +    L P+
Sbjct: 528 LCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPS 587

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T+ I A+C+ G +  A   F KMLE+G + N +TY+ LI    ++   + A+  + 
Sbjct: 588 AVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFH 647

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           EM E  + PN  +Y++LIDG CK G  E+A+  +     N + PD +T+  L +G+
Sbjct: 648 EMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  AL LFG L   GL P ++TYN +I GYC L  L+EA +L E++      P+  
Sbjct: 390 KAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVC 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPK----------------------------- 94
           T+TIL+        +  A   F +ML KG +                             
Sbjct: 450 TYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVM 509

Query: 95  ------ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                 ++ VTY+ LIDG  K+ N+  A D+  +M  N + P+ ++Y+ LI   C+RGL+
Sbjct: 510 MLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLL 569

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F   + + L P  VTY + I  YC+ G    A   +  ML  G+ P+ +  + L
Sbjct: 570 REARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
            +KE   D    L  ++  RG    P+ +T+N +I G      L+EA ++ E +   + K
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-K 305

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            +S T+  LI     +G +  A  +  +M  +G    VVTY+ +I G  +S  +++A   
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + EM    + P++++Y+ L++G CK G ++EAL  F       L P V+TY ILI GYC+
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            G   EA +L + M+  G +PD      +  Y +   GS   C
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPD------VCTYTILMKGSHNAC 462



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK--PNSITFTILIDAFCKEGRMD 79
           G+EP I+TYNT++  +    R D+   L +++        PN +T  ++I    ++G ++
Sbjct: 232 GIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLE 291

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A  M   M     KA+  TY+ LI G      +K A D+  EM    I P +V+Y+ +I
Sbjct: 292 EAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMI 350

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            GL + G +E A   F       L PDV+TY  L+ GYCKAG   EA+ L+  +   G+ 
Sbjct: 351 HGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLA 410

Query: 200 PDGLLLSTLAD 210
           P  L  + L D
Sbjct: 411 PTVLTYNILID 421



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 97/174 (55%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
            TYN +I G  +   + +A  L  ++    + P  +T+  +I    + G+++ A + F +
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G + +V+TY+ L++GY K+ ++K A  ++ ++    ++P +++Y+ILIDG C+ G 
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +EEA       ++   LPDV TY IL++G   A     A + +D ML  G+ PD
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G+ P ++TYN +I G     +++ A   F ++  + L+P+ IT+  L++ +CK G
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG 392

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            + +A ++F  +   G    V+TY+ LIDGY +  +++ A  + EEM E    P++ +Y+
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           IL+ G      +  A   F   L   L PD   Y   IR     G   +A +L + M+  
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512

Query: 197 GIMPDGLLLSTLAD 210
           GI  D +  + L D
Sbjct: 513 GISSDTVTYNILID 526


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KLF Q+  RG+ P+  TY +++ G C   RLD+A+ L +++    L PN +
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+++D  CKEG++ +A  + S M   G KAN + Y+ LI G+F + N + A D+  +M
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 124 -------------------CENN----------------ISPNIVSYSILIDGLCKRGLM 148
                              C++                 + PN V Y+ ++D L K G  
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+   H  LD+   P+VVTY  LI G CKAG  +EA+  ++ M   G+ P+    + L
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 209 AD 210
            D
Sbjct: 557 ID 558



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 119/219 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  LF ++   G  PD++TYN++I GY     L+E  QL  ++       +
Sbjct: 210 LCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAAD 269

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ F K GRM+ A   F +M  +G  ANVVT+S  +D + K   ++ A  ++ 
Sbjct: 270 VVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFA 329

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN  +Y+ L+DG CK G +++A+      +   L+P+VVTY +++ G CK G
Sbjct: 330 QMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG 389

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA  +   M R G+  + LL +TL   +  ++ S+ 
Sbjct: 390 KVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSER 428



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 109/193 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL L  Q+ ++G+E D+  Y T+I G C   ++DEA  L  K+    L+PN++ +T +
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTI 486

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DA  K G+  +A  +  K+L+ G + NVVTY  LIDG  K+ ++  A   + +M E  +
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+ +Y+ LIDG CK G + +A++  +  +D  +  D V Y  LI GY K     +A  
Sbjct: 547 DPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFA 606

Query: 189 LYDSMLRNGIMPD 201
           L   M+ +G+  D
Sbjct: 607 LKTKMIESGLQLD 619



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 105/186 (56%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P++ T+N +I   C    L EA  LF ++  +   P+ +T+  LID + K G +++   +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S+M + G  A+VVTY+ LI+ + K   M+ A+  + EM    +  N+V++S  +D  CK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL++EA+  F       ++P+  TY  L+ G CKAGR  +A+ L D M+  G++P+ + 
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 205 LSTLAD 210
            + + D
Sbjct: 378 YTVMVD 383



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 100/192 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A+ L  ++ D G +P+++TY  +I G C    + EA+  F K+  + L PN
Sbjct: 490 LFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPN 549

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T LID FCK G ++ A  + ++M++KG   + V Y+ LIDGY K  N++ AF +  
Sbjct: 550 VQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKT 609

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E+ +  ++  Y+  I G C   +M+EA       +   + PD   Y  LIR Y K G
Sbjct: 610 KMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLG 669

Query: 182 RPTEAMQLYDSM 193
              EA  L + M
Sbjct: 670 NMEEASSLQNEM 681



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 109/214 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A   FG++  +G+  +++T++T +  +C    + EA++LF ++    + PN  T+T
Sbjct: 285 RMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYT 344

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK GR+DDA ++  +M+ +G   NVVTY+ ++DG  K   +  A +V   M   
Sbjct: 345 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG 404

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N + Y+ LI G       E AL   +   +  +  DV  Y  LI G CK  +  EA
Sbjct: 405 GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA 464

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             L   M   G+ P+ ++ +T+ D   ++    E
Sbjct: 465 KSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESE 498



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 35/252 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ L  ++  +GL P+++TY  ++ G C   ++ EA  +   +    +K N +
Sbjct: 352 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANEL 411

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
            +T LI                                      CK+ ++D+A  +  KM
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G + N V Y+ ++D  FK+     A  +  ++ ++   PN+V+Y  LIDGLCK G +
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+  F+   +  L P+V  Y  LI G+CK G   +AM L + M+  G+  D ++ ++L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591

Query: 209 ADYNLQSSGSQE 220
            D  ++ +  Q+
Sbjct: 592 IDGYMKQANLQD 603



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A  L  ++   GL P+ + Y TI+       +  EAV L  K+     +PN
Sbjct: 455 LCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPN 514

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G + +A   F+KM E G   NV  Y+ LIDG+ K  ++  A  +  
Sbjct: 515 VVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMN 574

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +S + V Y+ LIDG  K+  +++A       +++ L  D+  Y   I G+C   
Sbjct: 575 EMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMN 634

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              EA  +   M+  GI PD
Sbjct: 635 MMQEARGVLSEMIGTGITPD 654



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 8/170 (4%)

Query: 43  LDEAVQLFEKLTCVQLKPNSIT--FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           LD+AV+   ++  +++ PN+ T    +L  A  ++G +        ++ +  P  NV T+
Sbjct: 150 LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL------VRRLFDLLPVPNVFTF 203

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + +ID   K   +  A  ++  M     SP++V+Y+ LIDG  K G +EE          
Sbjct: 204 NIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK 263

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +    DVVTY  LI  + K GR  +A   +  M R G++ + +  ST  D
Sbjct: 264 SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVD 313


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 121/220 (55%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A +L   +   G+ PD+I+YNT++ G+C   R DEA +L + +  + LKPN
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+  +CK  R+DDA  +  +ML  GP  +VVTY+ ++ G F++     A ++Y 
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +    ++ +Y+I+++GLCK   ++EA   F       L   ++T+ I+I    K G
Sbjct: 653 NMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGG 712

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           +  +AM L+ ++   G++PD      +A+ NL   GS E 
Sbjct: 713 KKEDAMDLFATISAYGLVPDVETYCLIAE-NLIKEGSLEE 751



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 118/197 (59%), Gaps = 9/197 (4%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF------EKLTCVQLKPNSITFTI 67
           L  ++ + G  P++++YNT++ G+C+ NR +EA++L       + L+C    P+ +++  
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSC---PPDVVSYNT 309

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+ F +EG++D A  +F +M+++G   +VVTY+ +IDG  K+Q +  A  V+++M +  
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y+ LI G    G  +E +        + L PD   YA+L+   CK GR TEA 
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429

Query: 188 QLYDSMLRNGIMPDGLL 204
            ++DS++R GI PD ++
Sbjct: 430 NIFDSVIRKGIKPDAMI 446



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
            L+    +FG +   G   + I +N ++ G C   RLDEA   L  ++      PN +++
Sbjct: 210 RLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSY 269

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             L+  FC E R ++A  +   M +        +VV+Y+ +I+G+F+   +  A++++ +
Sbjct: 270 NTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ 329

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I P++V+Y+ +IDGLCK  +++ A   F   LD  + P   TY  LI GY   G+
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             E ++L + M  + + PD  + + L DY
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDY 418



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 37/226 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +F Q+ D+G++P   TYN +I GY S  +  E V+L E+++   L+P+   + +
Sbjct: 355 VDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYAL 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK GR  +A  +F  ++ KG K +      +ID          A  ++++M +  
Sbjct: 415 LLDYLCKNGRCTEARNIFDSVIRKGIKPDA-----MID---------EAVCIFDKMRQQG 460

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFH---------CA--------------LDNHLL 164
           +SPN+V+Y  LID LCK G +++A+  F+         C               LD  + 
Sbjct: 461 LSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIR 520

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            DVV +  L+   C+ GR  EA +L + MLR G+ PD +  +TL D
Sbjct: 521 LDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVD 566



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 24/214 (11%)

Query: 5   ECHLDAALKLFGQLTD-RGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           E   + AL+L   + D +GL   PD+++YNT+I G+    ++D+A  LF ++    + P+
Sbjct: 279 ENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID  CK   +D A  +F +ML+KG K +  TY+CLI GY  +   K    + E
Sbjct: 339 VVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLE 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRG---------------------LMEEALYAFHCALD 160
           EM  +++ P+   Y++L+D LCK G                     +++EA+  F     
Sbjct: 399 EMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQ 458

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
             L P+VV Y  LI   CK GR  +A+  ++ M+
Sbjct: 459 QGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 105/200 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL   +   GL+P+  TYNT++ GYC   R+D+A  L  ++      P+ +T+  +
Sbjct: 575 DEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTI 634

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +    + GR  +A  ++  M+    + ++ TY+ +++G  K+  +  AF +++ +C   +
Sbjct: 635 LHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGL 694

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             +I++++I+I  L K G  E+A+  F       L+PDV TY ++     K G   E   
Sbjct: 695 QLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGV 754

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+ +M  NG  P+  +L+ L
Sbjct: 755 LFSAMEENGTAPNSRMLNAL 774



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 13/213 (6%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIIC------GYCSLNRLDEAVQLFEKLT---CVQLKPN 61
           ALKLF  L        +  +N ++       G  S       + LF+++      ++ P+
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-Y 120
             T++ILI  FC+ GR++    +F  +L+ G + N + ++ L+ G   ++ +  A ++  
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILL 254

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL---PDVVTYAILIRGY 177
             M E   +PN+VSY+ L+ G C     EEAL   H   D+  L   PDVV+Y  +I G+
Sbjct: 255 WRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGF 314

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + G+  +A  L+  M+  GI PD +  +T+ D
Sbjct: 315 FREGQVDKAYNLFLQMIDRGIPPDVVTYNTVID 347



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 23/217 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CV----- 56
           +D A+ +F ++  +GL P+++ Y  +I   C L R+D+A+  F ++       C      
Sbjct: 446 IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWE 505

Query: 57  ------------QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
                        ++ + + F  L+   C+EGR+ +A  +   ML  G + +V++Y+ L+
Sbjct: 506 KAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLV 565

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           DG+  +     A  + + M    + PN  +Y+ L+ G CK   +++A       L N   
Sbjct: 566 DGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           PDVVTY  ++ G  + GR +EA +LY +M+ +    D
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWD 662



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 89/183 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  L  ++   G  PD++TYNTI+ G     R  EA +L+  +   + + +  
Sbjct: 605 KARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMY 664

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+++  CK   +D+A  MF  +  KG + +++T++ +I    K    + A D++  +
Sbjct: 665 TYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++ +Y ++ + L K G +EE    F    +N   P+      L+R +   G  
Sbjct: 725 SAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDI 784

Query: 184 TEA 186
           + A
Sbjct: 785 SRA 787



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  L  +GL+  IIT+N +I       + ++A+ LF  ++   L P+  T+ +
Sbjct: 679 VDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCL 738

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   KEG +++  ++FS M E G   N    + L+  +    ++  A     ++ E N
Sbjct: 739 IAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798

Query: 128 ISPNIVSYSILIDGLCKRG 146
            S    + S+LI  L  RG
Sbjct: 799 FSLEASTASMLIS-LYSRG 816



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 45/159 (28%)

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA---------FDVYEEMCENNISP 130
           DA  +F  +L     A+V  ++ L+    ++    S          FD     C + ++P
Sbjct: 134 DALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAP 193

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALD-----NHLL--------------------- 164
           +  +YSILI   C+ G +E     F   L      NH++                     
Sbjct: 194 DRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL 253

Query: 165 ----------PDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
                     P+VV+Y  L++G+C   R  EA++L   M
Sbjct: 254 LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVM 292



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 50/121 (41%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A+ LF  ++  GL PD+ TY  I         L+E   LF  +      PN
Sbjct: 708 LLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPN 767

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S     L+  F   G +  A    SK+ EK       T S LI  Y + +  + A  + E
Sbjct: 768 SRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPE 827

Query: 122 E 122
           +
Sbjct: 828 K 828


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 114/234 (48%), Gaps = 38/234 (16%)

Query: 6   CHLDAALKLFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C   A  + FG    + D GL PD  TY  +I G C   R +EA  L ++++C +LKPN 
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222

Query: 63  ITFTILIDAF-----------------------------------CKEGRMDDATMMFSK 87
           + +  LID F                                   CK G+MD A+++  +
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+    + + +TY+ +I+G+F+  N K AF +  EM    ISPN+ +YSI+I GLC+ G 
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            E+A           L P+   YA LI GYC+ G  + A +++D M +  ++PD
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ + K F Q+ +RGL P+  TY+ +I GY     L+ A QL +++    LKPN
Sbjct: 407 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 466

Query: 62  SITFTILIDAFCKE-----------------------------------GRMDDATMMFS 86
            + +  L++++ K                                    G M+ A  + S
Sbjct: 467 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 526

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           ++ + G   +V  YS LI G  K+ + + AF + +EM +  + PNIV Y+ LIDGLCK G
Sbjct: 527 EIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 586

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +  A   F+  L   L+P+ VTY  LI G CK G  + A  LY+ ML  GI PD  + S
Sbjct: 587 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 646

Query: 207 TL 208
            L
Sbjct: 647 VL 648



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 107/203 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  Q+      PD ITYN II G+   +   +A +L  ++    + PN
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I   C+ G  + A+ +  +M  KG K N   Y+ LI GY +  N+  A ++++
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + N+ P++  Y+ LI GL K G +EE+   F    +  LLP+  TY+ LI GY K G
Sbjct: 387 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 446

Query: 182 RPTEAMQLYDSMLRNGIMPDGLL 204
               A QL   ML  G+ P+ ++
Sbjct: 447 DLESAEQLVQRMLDTGLKPNDVI 469



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 115/220 (52%), Gaps = 5/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E + D A K+  ++   G++P+ ITY+ ++ G C + ++D A  L +++     +P+
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+ ++I+   +     DA  + S+M   G   NV TYS +I G  +S   + A D+ E
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN   Y+ LI G C+ G +  A   F      ++LPD+  Y  LI G  K G
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411

Query: 182 RPTEAMQLYDSMLRNGIMPD-----GLLLSTLADYNLQSS 216
           R  E+ + +  M   G++P+     GL+   L + +L+S+
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 451



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 110/203 (54%), Gaps = 3/203 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++AA ++  ++   G  PD+  Y+++I G C     ++A  + ++++   + PN + + 
Sbjct: 517 NMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 576

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK G +  A  +F+ +L KG   N VTY+ LIDG  K  ++ +AF +Y EM   
Sbjct: 577 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 636

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            I+P+   YS+L  G    G +E+A++      L  H    + ++  L+ G+CK G+  E
Sbjct: 637 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQE 694

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
            ++L   ++  G++P+ L +  +
Sbjct: 695 TLKLLHVIMGRGLVPNALTIENI 717



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  L  ++T +GL+P+   Y  +I GYC    +  A ++F+K+T V + P+   +  L
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 403

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I    K GR++++T  F++M E+G   N  TYS LI GY K+ +++SA  + + M +  +
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN V Y  L++   K   +E+    F   LD  ++ D   Y ILI     +G    A +
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +   + +NG +PD  + S+L
Sbjct: 524 VLSEIEKNGSVPDVHVYSSL 543



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 1/210 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+ P++ TY+ +I G C     ++A  L E++T   LKPN+  +  LI 
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 370

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+EG +  A  +F KM +     ++  Y+ LI G  K   ++ +   + +M E  + P
Sbjct: 371 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +YS LI G  K G +E A       LD  L P+ V Y  L+  Y K+    +    +
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            SML  G+M D  +   L  +NL SSG+ E
Sbjct: 491 KSMLDQGVMLDNRIYGILI-HNLSSSGNME 519



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 1/189 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  +  +++ +G++P+I+ YN +I G C    +  A  +F  +    L PN
Sbjct: 547 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 606

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID  CK G + +A  ++++ML  G   +   YS L  G   + +++ A  + E
Sbjct: 607 CVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIE 666

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       +I S++ L+DG CKRG M+E L   H  +   L+P+ +T   +I G  +AG
Sbjct: 667 EMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 725

Query: 182 RPTEAMQLY 190
           + +E   ++
Sbjct: 726 KLSEVHTIF 734



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 6/208 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++   + DRGL P I   N ++      + +    ++ E +    + P+  
Sbjct: 59  KSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 118

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+A+CK    D A  +  +M E+G   N VTY+ LI G  +S  ++ AF   ++M
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---LYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +  + P+  +Y  LI+GLCK     EA   L    CA    L P+VV YA LI G+ + 
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA---ELKPNVVVYANLIDGFMRE 235

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA ++   M+  G+ P+ +    L
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNL 263



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  + D+G+  D   Y  +I    S   ++ A ++  ++      P+   ++ LI   CK
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
               + A  +  +M +KG   N+V Y+ LIDG  KS ++  A +V+  +    + PN V+
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 609

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ LIDG CK G +  A Y ++  L   + PD   Y++L  G   AG   +AM L + M 
Sbjct: 610 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669

Query: 195 RNG 197
             G
Sbjct: 670 LRG 672



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 37/190 (19%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+D + K GR+ DA  +   M ++G   ++   + L+    ++  M   + V E M   
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111

Query: 127 NISPNIVSYSILID-----------------------------------GLCKRGLMEEA 151
            ISP++ +YS LI+                                   GLC+ G +EEA
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 152 LYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + F   ++++ L+PD  TY  LI G CK+ R  EA  L D M    + P+ ++ + L D
Sbjct: 172 -FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 211 YNLQSSGSQE 220
             ++   + E
Sbjct: 231 GFMREGNADE 240



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 18/190 (9%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ L  ++  RG    I ++N ++ G+C   ++ E ++L   +    L PN++T   
Sbjct: 658 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I    + G++ +   +F ++ +K  ++    +S L          K   DV ++M  ++
Sbjct: 717 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG--KIPLDVVDDMIRDH 774

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
                          CK G +++AL      +         +Y  ++   C+ G+ +EA+
Sbjct: 775 ---------------CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 819

Query: 188 QLYDSMLRNG 197
            L   M + G
Sbjct: 820 NLLKEMDKRG 829



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 19/150 (12%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +   LKL   +  RGL P+ +T   II G     +L E   +F +L     +  + 
Sbjct: 688 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 747

Query: 64  TFTIL------------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
            F+ L                  I   CKEG +D A M+   ++ K       +Y  ++D
Sbjct: 748 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 807

Query: 106 GYFKSQNMKSAFDVYEEM-CENNISPNIVS 134
              +   +  A ++ +EM    N+ P +V+
Sbjct: 808 NLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 8/226 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A + + ++  +G+   + + N+I+ GY        A  +F       L  N  
Sbjct: 310 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVF 368

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+   CKEG+M++A  ++ +++ KG   NVV+Y+ +I G+ +  N+ +A  VY+EM
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N  +PN V+++IL+DG  K+G +E A   FH   D ++LP   T  I+I+G CKAGR 
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD-------YNLQSSGSQEHC 222
            E   L++  +  G +P  +  +T+ D        NL S+  +E C
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMC 534



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 113/215 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D ALKL   +  +GL+ DI  Y T+I G+C    +  A +L  +L    L PN  
Sbjct: 554 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 613

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I  F     +++A  ++ KM+ +G   ++ TY+ LIDG  KS  +  A D++ EM
Sbjct: 614 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 673

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+  ++++LI+GLC +G  E A          +++P V+ Y  LI G+ K G  
Sbjct: 674 LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 733

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            EA +L+D ML  G++PD +    L +   +  G+
Sbjct: 734 QEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGN 768



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 123/243 (50%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L KE  ++ A  L+ ++  +G+ P++++YN II G+C  + ++ A ++++++      P
Sbjct: 376 WLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTP 435

Query: 61  NSITFTILIDAFCKEG----------RMDDATMM-------------------------F 85
           N++TFTIL+D + K+G          RM DA ++                         F
Sbjct: 436 NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLF 495

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           +K + +G     + Y+ +IDG+ K  N+  A +VY EMCE  I+P+ V+Y+ LIDG CK 
Sbjct: 496 NKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKG 555

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
             ++ AL   +      L  D+  Y  LI G+CK      A +L + +   G+ P+  + 
Sbjct: 556 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 615

Query: 206 STL 208
           +++
Sbjct: 616 NSM 618



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 103/188 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF +   +G  P  + YNTII G+     ++ A  ++ ++  V + P+++T+T LID FC
Sbjct: 494 LFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFC 553

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   +D A  + + M  KG K ++  Y  LIDG+ K ++MKSA ++  E+    +SPN  
Sbjct: 554 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 613

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            Y+ +I G      +EEA+  +   ++  +  D+ TY  LI G  K+GR   A  ++  M
Sbjct: 614 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 673

Query: 194 LRNGIMPD 201
           L  GI+PD
Sbjct: 674 LSKGILPD 681



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F    + GL  ++ T+NT++   C   +++EA  L++++    + PN +++  +I 
Sbjct: 352 AFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL 410

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++  ++ A  ++ +ML+ G   N VT++ L+DGYFK  ++++AF ++  M + NI P
Sbjct: 411 GHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILP 470

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +  I+I GLCK G   E    F+  +    +P  + Y  +I G+ K G    A  +Y
Sbjct: 471 TDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVY 530

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M   GI P  +  ++L D
Sbjct: 531 REMCEVGITPSTVTYTSLID 550



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E ++  A + F Q   RG+E D   Y+  +   C       A+ L  ++      P  
Sbjct: 169 IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 228

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TFT +I A  KEG + +A  +   M+  G   N+   + L+ GY    N++SA  +  E
Sbjct: 229 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHL---- 163
           + E+ + PN V+YS+LIDG CK G +E+A               +Y+ +  L+ +L    
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348

Query: 164 ---------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                          L +V T+  L+   CK G+  EA  L+D ++  GI P+
Sbjct: 349 WQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 401



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 56/108 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L  A  +  ++  +G+ PD   +  +I G C+  + + A ++ E +    + P+
Sbjct: 657 LLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPS 716

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
            + +  LI    KEG + +A  +  +ML++G   + +TY  L++G FK
Sbjct: 717 VLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 764


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 116/198 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  AL LF  +T R L+PD++TYNT++ G+C +  +++A +L+  +   ++ P+ I
Sbjct: 481 KDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYI 540

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +F+ILI+ FC  G + +A  ++ +M EKG K  +VT + +I GY ++ N+  A D    M
Sbjct: 541 SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTM 600

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ ++Y+ LI+   K    + A +  +   +  LLP++VTY  ++ G+ + GR 
Sbjct: 601 ISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRM 660

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  +   M+  GI PD
Sbjct: 661 QEAEMVLHKMIDKGINPD 678



 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 119/203 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  ALK+  ++ +RG   D++TYNT++ G C    LD+A +LF+++    + P+  T T 
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +CK+G M  A  +F  M  +  K +VVTY+ L+DG+ K   M+ A +++ +M    
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+ +S+SILI+G C  GL+ EA   +    +  + P +VT   +I+GY +AG  ++A 
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
              ++M+  G+ PD +  +TL +
Sbjct: 595 DFLNTMISEGVPPDCITYNTLIN 617



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 122/213 (57%), Gaps = 3/213 (1%)

Query: 1   MLIKECHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           ML++ C  +    A ++F ++  RG+ PD+I++++I+  +     L  A+  FEK+  V 
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+++ +TILI+ +C+   +  A  M ++M+E+G   +VVTY+ L++G  + + +  A 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           ++++EM E  + P+  + + LI G CK G M +AL  F       L PDVVTY  L+ G+
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK G   +A +L+  M+   I P  +  S L +
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILIN 547



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A ++  ++   GL P+  T+N ++   C    + EA ++F ++    + P+
Sbjct: 304 LCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPD 363

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I+F+ ++  F + G +  A   F KM   G   + V Y+ LI+GY ++ ++  A  +  
Sbjct: 364 LISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRN 423

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E     ++V+Y+ L++GLC+  ++++A   F   ++  + PD  T   LI GYCK G
Sbjct: 424 EMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDG 483

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             T+A+ L+++M    + PD +  +TL D
Sbjct: 484 NMTKALSLFETMTLRSLKPDVVTYNTLMD 512



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 107/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD       ++ ++G+  D++TYNT++  YC    + EA  L + +    LKP 
Sbjct: 234 LCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPG 293

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI+  CKEG  + A  +  +ML  G   N  T++ ++    + +++  A  V+ 
Sbjct: 294 LFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFN 353

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + P+++S+S ++    + G +  AL  F       L+PD V Y ILI GYC+  
Sbjct: 354 EMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND 413

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + A+++ + M+  G + D +  +TL
Sbjct: 414 DVSGALKMRNEMVERGCVMDVVTYNTL 440



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 100/195 (51%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  L  RG    I   N ++     +  +D A +++E         N  T  I+++A CK
Sbjct: 177 FQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCK 236

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           +G++D+  +  S+M EKG  A++VTY+ L++ Y +   +  AF + + M    + P + +
Sbjct: 237 DGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFT 296

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ LI+GLCK G  E A       L   L P+  T+  ++   C+     EA ++++ ML
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356

Query: 195 RNGIMPDGLLLSTLA 209
           + G++PD +  S++ 
Sbjct: 357 QRGVVPDLISFSSIV 371



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 67/129 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++  +L  A      +   G+ PD ITYNT+I  +      D A  L   +    L PN 
Sbjct: 585 LRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNL 644

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  ++  F + GRM +A M+  KM++KG   +  TY+ LI+GY    NMK AF V++E
Sbjct: 645 VTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDE 704

Query: 123 MCENNISPN 131
           M +    P+
Sbjct: 705 MLQRGFVPD 713



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 67/138 (48%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + F +LI  + +  ++ + +  F  + ++G   ++   + L+    K   +  A+ VYE+
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             ++    N+ + +I+++ LCK G ++          +  +  D+VTY  L+  YC+ G 
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 183 PTEAMQLYDSMLRNGIMP 200
            +EA  L D M   G+ P
Sbjct: 275 VSEAFGLVDCMAGKGLKP 292


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F ++T  GL P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +M+DA  +F +M+  G   N VT++ LIDG+ K+ ++  A + Y+EM
Sbjct: 208 TYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SP++++Y+ LI GLCK G +++A           L PD +TY  LI G CK G  
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 328 ETAFKYKKRMIKENIRLDDVAYTAL 352



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 110/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++++A +LF+++    L PN +TFT 
Sbjct: 187 LDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D A   + +ML +G   +++TY+ LI G  K  ++K A D+ +EM    
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAE 366

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 367 KMLREMLSVGLKPD 380



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K  +  +    + ++ + G    +  +N ++  +C    +  A  +F+++T   L+P+
Sbjct: 111 FMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFD 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N + PN V+++ LIDG CK G ++ A+ A+   L     PD++TY  LI G CK G
Sbjct: 231 EMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLID 319



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 107/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +LF ++   GL P+ +T+ T+I G+C    +D A++ ++++      P+
Sbjct: 216 LCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CKEG +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF   +
Sbjct: 276 LITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G    A       L   L PD  TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 396 DVKMGSKLLKEMQRDGHVP 414



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EG+   A  M  +ML  G K +  TY+ +I+ + K  ++K    + +
Sbjct: 346 DVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P +V+
Sbjct: 406 EMQRDGHVPCVVT 418



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 37/204 (18%)

Query: 44  DEAVQLFEKLTCVQ--LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           D A  +FE +   +   + +   F+ LI A+ + G + DA   F    E        T  
Sbjct: 46  DSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCR 105

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA---------- 151
            +++ + K +  KS +  Y+E+ E     ++  ++IL+   CK G M  A          
Sbjct: 106 KVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKW 165

Query: 152 -----LYAFHCALDNHLL--------------------PDVVTYAILIRGYCKAGRPTEA 186
                + +F+  ++ ++                     PDV TY++LI G CK  +  +A
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDA 225

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L+D M+ NG++P+G+  +TL D
Sbjct: 226 NELFDEMIGNGLVPNGVTFTTLID 249


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 8/226 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A + + ++  +G+   + + N+I+ GY        A  +F       L  N  
Sbjct: 192 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVF 250

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+   CKEG+M++A  ++ +++ KG   NVV+Y+ +I G+ +  N+ +A  VY+EM
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N  +PN V+++IL+DG  K+G +E A   FH   D ++LP   T  I+I+G CKAGR 
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD-------YNLQSSGSQEHC 222
            E   L++  +  G +P  +  +T+ D        NL S+  +E C
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMC 416



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 113/215 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D ALKL   +  +GL+ DI  Y T+I G+C    +  A +L  +L    L PN  
Sbjct: 436 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 495

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I  F     +++A  ++ KM+ +G   ++ TY+ LIDG  KS  +  A D++ EM
Sbjct: 496 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 555

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+  ++++LI+GLC +G  E A          +++P V+ Y  LI G+ K G  
Sbjct: 556 LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 615

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            EA +L+D ML  G++PD +    L +   +  G+
Sbjct: 616 QEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGN 650



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  L+ ++  +G+ P++++YN II G+C  + ++ A ++++++      PN
Sbjct: 259 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 318

Query: 62  SITFTILIDAFCKEG----------RMDDATMM-------------------------FS 86
           ++TFTIL+D + K+G          RM DA ++                         F+
Sbjct: 319 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 378

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           K + +G     + Y+ +IDG+ K  N+  A +VY EMCE  I+P+ V+Y+ LIDG CK  
Sbjct: 379 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 438

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++ AL   +      L  D+  Y  LI G+CK      A +L + +   G+ P+  + +
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498

Query: 207 TL 208
           ++
Sbjct: 499 SM 500



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 103/188 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF +   +G  P  + YNTII G+     ++ A  ++ ++  V + P+++T+T LID FC
Sbjct: 376 LFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFC 435

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K   +D A  + + M  KG K ++  Y  LIDG+ K ++MKSA ++  E+    +SPN  
Sbjct: 436 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 495

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            Y+ +I G      +EEA+  +   ++  +  D+ TY  LI G  K+GR   A  ++  M
Sbjct: 496 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 555

Query: 194 LRNGIMPD 201
           L  GI+PD
Sbjct: 556 LSKGILPD 563



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F    + GL  ++ T+NT++   C   +++EA  L++++    + PN +++  +I 
Sbjct: 234 AFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL 292

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++  ++ A  ++ +ML+ G   N VT++ L+DGYFK  ++++AF ++  M + NI P
Sbjct: 293 GHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILP 352

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +  I+I GLCK G   E    F+  +    +P  + Y  +I G+ K G    A  +Y
Sbjct: 353 TDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVY 412

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M   GI P  +  ++L D
Sbjct: 413 REMCEVGITPSTVTYTSLID 432



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE ++  A + F Q   RG+E D   Y+  +   C       A+ L  ++      P  
Sbjct: 51  LKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 110

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TFT +I A  KEG + +A  +   M+  G   N+   + L+ GY    N++SA  +  E
Sbjct: 111 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 170

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHL---- 163
           + E+ + PN V+YS+LIDG CK G +E+A               +Y+ +  L+ +L    
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230

Query: 164 ---------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                          L +V T+  L+   CK G+  EA  L+D ++  GI P+
Sbjct: 231 WQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 283



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 83/188 (44%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   G+  D  T + ++        + EA Q F +     ++ +   ++I + 
Sbjct: 24  ARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVH 83

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C +     A  +  +M   G      T++ +I    K  N+  A  + ++M     S 
Sbjct: 84  LLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 143

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+   + L+ G C +G +  AL   +   ++ L+P+ VTY++LI G CK G   +A + Y
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 203

Query: 191 DSMLRNGI 198
             M   GI
Sbjct: 204 SEMKTKGI 211



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 56/109 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L  A  +  ++  +G+ PD   +  +I G C+  + + A ++ E +    + P+
Sbjct: 539 LLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPS 598

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS 110
            + +  LI    KEG + +A  +  +ML++G   + +TY  L++G FK 
Sbjct: 599 VLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 647


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  A K+F ++T R L P ++++NT+I GYC +  LD   +L   +   + +P+  
Sbjct: 252 KEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVF 311

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+A CKE +MD A  +F +M E+G   N V ++ LI G+ ++  +    + Y++M
Sbjct: 312 TYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKM 371

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+IV Y+ L++G CK G +  A       +   L PD VTY  LI G+C+ G  
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDV 431

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+++   M +NGI  D +  S L
Sbjct: 432 DTALEIRKEMDQNGIELDRVGFSAL 456



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 118/218 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +D   + + ++  +GL+PDI+ YNT++ G+C    L  A  + + +    L+P+ +
Sbjct: 357 RNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKV 416

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID FC+ G +D A  +  +M + G + + V +S LI G  K   +  A     EM
Sbjct: 417 TYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREM 476

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+ V+Y++++D  CK+G  +           +  +P+VVTY +L+ G CK G+ 
Sbjct: 477 LRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQM 536

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
             A  L D+ML  G++PD +  +TL + + + + + +H
Sbjct: 537 KNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKH 574



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 103/197 (52%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            + ++ D G   ++  +N ++  +C    + +A ++F+++T   L+P  ++F  LI+ +C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D    +   M +   + +V TYS LI+   K   M  A  ++ EMCE  + PN V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ LI G  + G ++    ++   L   L PD+V Y  L+ G+CK G    A  + D M
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 194 LRNGIMPDGLLLSTLAD 210
           +R G+ PD +  +TL D
Sbjct: 407 IRRGLRPDKVTYTTLID 423



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 109/198 (55%), Gaps = 3/198 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L AA  +   +  RGL PD +TY T+I G+C    +D A+++ +++    ++ + +
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRV 451

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI   CKEGR+ DA     +ML  G K + VTY+ ++D + K  + ++ F + +EM
Sbjct: 452 GFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN+V+Y++L++GLCK G M+ A       L+  ++PD +TY  L+ G+    R 
Sbjct: 512 QSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGH---HRH 568

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A + Y      GI+ D
Sbjct: 569 ANASKHYKQKPEIGIVAD 586



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D   K          + ++L+ G   NV  ++ L++ + K  N+  A  V++E+ + +
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P +VS++ LI+G CK G ++      H    +   PDV TY+ LI   CK  +   A 
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+  M   G++P+ ++ +TL
Sbjct: 331 RLFYEMCERGLIPNDVIFTTL 351



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A +   ++   G++PD +TY  ++  +C         +L +++      PN +
Sbjct: 462 KEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVV 521

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L++  CK G+M +A M+   ML  G   + +TY+ L++G+ +  N   A   Y++ 
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASKHYKQK 578

Query: 124 CENNISPNIVSYSILIDGLCK 144
            E  I  ++ SY  L++ L +
Sbjct: 579 PEIGIVADLASYKSLVNELYR 599


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 119/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+  A+++   +   G +PD+ TYN++I G C L  + EAV++ +++      PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LI   CKE ++++AT +   +  KG   +V T++ LI G   ++N + A +++E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+  +Y++LID LC +G ++EAL        +     V+TY  LI G+CKA 
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +++D M  +G+  + +  +TL D
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLID 513



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +L   LT +G+ PD+ T+N++I G C       A++LFE++     +P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LID+ C +G++D+A  M  +M   G   +V+TY+ LIDG+ K+   + A ++++
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + +S N V+Y+ LIDGLCK   +E+A       +     PD  TY  L+  +C+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  +  +M  NG  PD +   TL
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTL 581



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 37/240 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL +  Q+   G    +ITYNT+I G+C  N+  EA ++F+++    +  NS+T+  
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK  R++DA  +  +M+ +G K +  TY+ L+  + +  ++K A D+ + M  N 
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 128 ISPNIVSYSILIDGLCKRGLME-----------------------------------EAL 152
             P+IV+Y  LI GLCK G +E                                   EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630

Query: 153 YAFHCALD-NHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             F   L+ N   PD V+Y I+ RG C  G P  EA+     +L  G +P+   L  LA+
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 102/188 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF ++  +G EPD  TYN +I   CS  +LDEA+ + +++       + IT+  LID
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  +  +A  +F +M   G   N VTY+ LIDG  KS+ ++ A  + ++M      P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ L+   C+ G +++A         N   PD+VTY  LI G CKAGR   A +L 
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 191 DSMLRNGI 198
            S+   GI
Sbjct: 599 RSIQMKGI 606



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 1/209 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPN 61
           I+E  LD AL++  Q+ + G     ++ N I+ G+C   R+++A+   ++++      P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  L++  CK G +  A  +   ML++G   +V TY+ +I G  K   +K A +V +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   + SPN V+Y+ LI  LCK   +EEA           +LPDV T+  LI+G C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               AM+L++ M   G  PD    + L D
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLID 443



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  A+ +   +   GL PD  T+ T++ GY     LD A+++ E++       +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++  +++  FCKEGR++DA     +M  + G   +  T++ L++G  K+ ++K A ++ 
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +    P++ +Y+ +I GLCK G ++EA+      +     P+ VTY  LI   CK 
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  EA +L   +   GI+PD
Sbjct: 379 NQVEEATELARVLTSKGILPD 399



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 2/195 (1%)

Query: 9   DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           D  L +   + D  GL+PD   YN ++      N L        K++   +KP+  TF +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C+  ++  A +M   M   G   +  T++ ++ GY +  ++  A  + E+M E  
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            S + VS ++++ G CK G +E+AL +    +  +   PD  T+  L+ G CKAG    A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 187 MQLYDSMLRNGIMPD 201
           +++ D ML+ G  PD
Sbjct: 315 IEIMDVMLQEGYDPD 329



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   G +PD  TYN+++  +C    + +A  + + +T    +P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK GR++ A+ +   +  KG       Y+ +I G F+ +    A +++ 
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634

Query: 122 EMCENN-ISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM E N   P+ VSY I+  GLC   G + EA+      L+   +P+  +  +L  G
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 2/190 (1%)

Query: 10  AALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AAL+LF   + +    P+   Y  I+         D+  ++ E +   + +  + TF IL
Sbjct: 65  AALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124

Query: 69  IDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           I+++ +    D+   +   M+++ G K +   Y+ +++      ++K     + +M    
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ ++++LI  LC+   +  A+          L+PD  T+  +++GY + G    A+
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244

Query: 188 QLYDSMLRNG 197
           ++ + M+  G
Sbjct: 245 RIREQMVEFG 254


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 110/193 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   L   G+  D +TYN +I G C    L +A +L  K+    L+P+ IT+T LI 
Sbjct: 469 ALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIH 528

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+ G + +A  +F+ M+  G   + VT++ +I  Y +  N+ SA+  + +M E  + P
Sbjct: 529 AHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEP 588

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y++LI  LC+ G  + A + FH  L+  L+ +  TY +LI G CK G   +AM+ Y
Sbjct: 589 NEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFY 648

Query: 191 DSMLRNGIMPDGL 203
             M +NGI PD L
Sbjct: 649 FEMHQNGIHPDYL 661



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   ++AA   F ++   GL PD+ITYN+++ GYC    L EA+ LF  L    L P 
Sbjct: 320 LLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ I ID +C+ G +++A ++  +M E+G   NV TY+ L+ G     ++  A + ++
Sbjct: 380 VLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFD 439

Query: 122 EMCENNISP-----------------------------------NIVSYSILIDGLCKRG 146
           EM    + P                                   + V+Y+ILI GLCK G
Sbjct: 440 EMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTG 499

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A       + N L PD +TY  LI  +C+ G   EA +++++M+ +G++P  +  +
Sbjct: 500 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 559

Query: 207 TL 208
            +
Sbjct: 560 VI 561



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL LFG L   GL P ++TYN  I GYC L  L+EA  L E++      PN  
Sbjct: 357 KAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVC 416

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPK----------------------------- 94
           T+TIL+        +  A   F +ML KG +                             
Sbjct: 417 TYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVL 476

Query: 95  ------ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                 ++ VTY+ LI G  K+ N+K A ++  +M  N + P+ ++Y+ LI   C+RGL+
Sbjct: 477 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLL 536

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA   F+  + + LLP  VT+ ++I  YC+ G    A   +  ML  G+ P+ +  + L
Sbjct: 537 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 596



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 98/176 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A +L  ++   GL+PD ITY  +I  +C    L EA ++F  +    L P+
Sbjct: 495 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++TFT++I A+C+ G +  A   F KMLE+G + N +TY+ LI    +    + A   + 
Sbjct: 555 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 614

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           EM E  +  N  +Y++LIDG CK G  E+A+  +     N + PD +T+  L++G+
Sbjct: 615 EMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 42/242 (17%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L  F ++   G+ PD+   N ++       R D+   + E++  + ++P+ +T+  L+D+
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 72  FCKEGRMDDATMMFSKMLEKGP------------------------------------KA 95
           F KEGR D   M+  +M  +G                                     KA
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +  TY+ LI G      +K  +D+  EM    I P +V+Y+ +I GL + GL+E A   F
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
                  LLPDV+TY  L+ GYCKAG   EA+ L+  + R G+ P      T+  YN++ 
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP------TVLTYNIRI 387

Query: 216 SG 217
            G
Sbjct: 388 DG 389



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 35/220 (15%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G+ P ++TYN +I G      ++ A   F ++  + L P+ IT+  L++ +CK G
Sbjct: 300 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 359

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            + +A ++F  +   G    V+TY+  IDGY +  +++ A  + EEM E    PN+ +Y+
Sbjct: 360 NLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYT 419

Query: 137 ILIDG---LCK----RGLMEEAL--------YAFHCALDNHLL----------------- 164
           IL+ G   +C     R   +E L        +A++  +   L+                 
Sbjct: 420 ILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLE 479

Query: 165 ---PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
               D VTY ILI G CK G   +A +L   M+ NG+ PD
Sbjct: 480 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 519



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 3/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
            +KE   D    L  ++  RG    P+ +TYN +I G      L+EA +L E +   + K
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-K 272

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            +S T+  LI      G +     +  +M  +G    VVTY+ +I G  +S  +++A   
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + EM    + P++++Y+ L++G CK G ++EAL  F       L P V+TY I I GYC+
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G   EA  L + M   G +P+
Sbjct: 393 LGDLEEARILKEEMGEQGCLPN 414


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 114/199 (57%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 170 IRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNG 229

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K+ ++K A D+ +E
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDE 289

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ G+
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQ 349

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 350 SVDAEKMLREMLSVGLKPD 368



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 136 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVY 195

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y+ M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRM 255

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKNGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 311

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 312 EGDLDTAFKHRKRMIQENIRLDDVAYTAL 340



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 204 LCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPD 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF   +
Sbjct: 264 LITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRK 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD+ TY ++I  +CK G
Sbjct: 324 RMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 383

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M RNG  P      ++  YN+  +G
Sbjct: 384 DVWKGSKLLKEMQRNGHAP------SVVTYNVLMNG 413



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 99  LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 158

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 159 VVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFD 218

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 219 EMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNG 278

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 279 DLKQAHDLIDEMSMKGLKPDKFTYTTLID 307



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 65/147 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 56  VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEI 115

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 116 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 175

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            E  +L  +ML NG+ PD    S L +
Sbjct: 176 DEGFRLKSAMLANGVQPDVYTYSVLIN 202


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 118/204 (57%), Gaps = 2/204 (0%)

Query: 7   HLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSIT 64
            + AAL +  ++ +RG + P+  TY T+I G+C + R+DEAV++F E LT  ++KP ++ 
Sbjct: 200 RVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 259

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +C +G++D A +   +M+E+G    V TY+ L+   F       A+++ EEM 
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              ++ ++ +Y+ILI+G CK G +++AL  F       +   VVTY  LI    K G+  
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 379

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L+D  +R GI PD +L + L
Sbjct: 380 ETDKLFDEAVRRGIRPDLVLYNAL 403



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 113/202 (55%), Gaps = 6/202 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  +GL  D+ TYN +I G+C    + +A+++FE ++   ++   +T+T LI 
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 370

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K+G++ +   +F + + +G + ++V Y+ LI+ +  S N+  AF++  EM +  I+P
Sbjct: 371 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 430

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ L+ GLC  G ++EA           + PD+VTY  LI GY   G   +A+++ 
Sbjct: 431 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 490

Query: 191 DSMLRNGIMPDGLLLSTLADYN 212
           + M+  G  P      TL  YN
Sbjct: 491 NEMMNKGFNP------TLLTYN 506



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 36/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K   +D A+K+F ++  +G ++P+ + YN +I GYC   +LD A+   +++    +    
Sbjct: 233 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 292

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ +L+ A   +GR  +A  +  +M  KG   +V TY+ LI+G+ K  N+K A +++E 
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFEN 352

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNH----- 162
           M    +   +V+Y+ LI  L K+G ++E                L  ++  +++H     
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 163 ---------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                          + PD VTY  L+RG C  GR  EA +L D M + GI PD +  +T
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 208 L 208
           L
Sbjct: 473 L 473



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 96/175 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +    KLF +   RG+ PD++ YN +I  + +   +D A ++  ++   ++ P+
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   C  GR+D+A  +  +M ++G + ++VTY+ LI GY    ++K A  +  
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM     +P +++Y+ LI GLCK G  ++A       ++N + PD  TY  LI G
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 93/155 (60%), Gaps = 3/155 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A ++ G++  + + PD +TYNT++ G C L R+DEA +L +++T   ++P+ +T+ 
Sbjct: 412 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 471

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +  +G + DA  + ++M+ KG    ++TY+ LI G  K+     A ++ +EM EN
Sbjct: 472 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 531

Query: 127 NISPNIVSYSILIDGLC---KRGLMEEALYAFHCA 158
            I+P+  +Y  LI+GL    +R + +E L A   A
Sbjct: 532 GITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 566


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 107/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  RG+  D +TYN +I G C    L +A  L+ K+    L+ + +T+T LI 
Sbjct: 494 AFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIH 553

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+ GR+ +A  +F  M+  G   +VVTY+  I  Y +  N+  A+  + +M E  + P
Sbjct: 554 AHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEP 613

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y++L+  LC+ G  E A   FH  L+  L+P+  TY +LI G CK G    A++LY
Sbjct: 614 NEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLY 673

Query: 191 DSMLRNGIMPD 201
             M + GI PD
Sbjct: 674 CEMHQKGIHPD 684



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 1/210 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            F ++  +GLEPD   YNT I    ++  +  A QL E++    +  +++T+ +LID  C
Sbjct: 462 FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLC 521

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G + DA +++ KM+  G + + VTY+CLI  + +   +  A ++++ M  + +SP++V
Sbjct: 522 KTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVV 581

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+I I   C+RG +  A   F   L+  + P+ VTY +L+   C+ GR   A Q +  M
Sbjct: 582 TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEM 641

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           L  G++P+    + L D + +  G+  H I
Sbjct: 642 LERGLVPNKYTYTLLIDGSCK-EGNWVHAI 670



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 109/197 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL LFG L   GL P ++TYN +I GYC L  L+ A +L E++T     P+  
Sbjct: 382 KAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVC 441

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TIL++  C    +    + F +ML KG + +   Y+  I        + +AF + EEM
Sbjct: 442 TYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEM 501

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               IS + V+Y++LIDGLCK G +++A   +   + + L  D VTY  LI  +C+ GR 
Sbjct: 502 MLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRL 561

Query: 184 TEAMQLYDSMLRNGIMP 200
            EA  ++D M+ +G+ P
Sbjct: 562 IEAKNIFDGMVASGLSP 578



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 2   LIKECH-----------LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF 50
            +KEC+            D    ++  +   G+EP I TYNT++  +C   R+D+AV L 
Sbjct: 193 FVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALL 252

Query: 51  EKLTCVQLK--PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           + +        PN +T+ ++I+   ++G ++ A  +   ++    KA+  TY+ LI G  
Sbjct: 253 KDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD-IMRLSKKASAFTYNPLITGLL 311

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
               ++ A  +  EM    I P +V+Y+ LIDGL K G  E A   F       LLPD++
Sbjct: 312 ARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLI 371

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           TY  LI GYCKAG   +A+ L+  + R G+ P  L  + L D
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 1/193 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  L+ ++   GL  D +TY  +I  +C   RL EA  +F+ +    L P+
Sbjct: 520 LCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPS 579

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI I  +C+ G +  A   F KMLE+G + N VTY+ L+    +    +SA+  + 
Sbjct: 580 VVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFH 639

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  + PN  +Y++LIDG CK G    A+  +       + PD  T+  L +G+ + G
Sbjct: 640 EMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE-G 698

Query: 182 RPTEAMQLYDSML 194
              +A+Q  ++++
Sbjct: 699 HMYDAVQYLENVV 711



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 92/174 (52%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
            TYN +I G  + + +++A  L  ++    + P  +T+  LID   K G  + A + F +
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  KG   +++TY+ LI+GY K+ N+K A  ++ ++    + P +++Y+ILIDG C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +E A        +   LPDV TY IL+ G C           +D ML  G+ PD
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD 474



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 100/203 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L  ++ + G+ P ++TYNT+I G       + A   F+++    L P+ IT+  
Sbjct: 316 VEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNS 375

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ +CK G +  A  +F  +   G    V+TY+ LIDGY +  +++ A  + EEM E +
Sbjct: 376 LINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED 435

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++ +Y+IL++G C    +      F   L   L PD   Y   I      G  T A 
Sbjct: 436 CLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAF 495

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           QL + M+  GI  D +  + L D
Sbjct: 496 QLREEMMLRGISSDTVTYNVLID 518


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A ++  ++  + + P + TY +II G   ++RLDEA  LFE+     ++ N I
Sbjct: 613 KSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  +M++KG   NV T++ L+D   K++ +  A   ++ M
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   SPN  +YSILI+GLC+     +A   +       L+P+VVTY  +I G  K G  
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNI 792

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T+A  L++    NG  PD    + L
Sbjct: 793 TDACSLFERFKANGGTPDAASFNAL 817



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 108/195 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G   D   YN ++ G+C   +LD+A ++ E++   ++ P   T+  +ID   
Sbjct: 588 IFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLA 647

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  R+D+A M+F +   KG + NV+ YS LIDG+ K   +  A+ + EEM +  ++PN+ 
Sbjct: 648 KIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 707

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ L+D L K   + EAL  F    +    P+  TY+ILI G C+  +  +A   +  M
Sbjct: 708 TWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 767

Query: 194 LRNGIMPDGLLLSTL 208
            + G++P+ +  +T+
Sbjct: 768 QKQGLVPNVVTYTTM 782



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + A KL  QL +RG  P ++++N+I+       ++DEA+ LFE +     +PNS T+ 
Sbjct: 337 QFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYN 395

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID  C  G++++A M+  +M   G   N++T + ++D   K++  + A++++E   + 
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQR 455

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +PN V+Y  LIDGL K+G +++A   F   LD     + V Y  LIR +   GR  + 
Sbjct: 456 GCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG 515

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  M R G  PD  LL+T  D
Sbjct: 516 HKIFKEMNRRGCQPDLTLLNTYMD 539



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 101/196 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF +   +G+E ++I Y+++I G+  + R+DEA  + E++    L PN
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+DA  K   +++A + F  M E     N  TYS LI+G  + Q    AF  ++
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN+V+Y+ +I GL K G + +A   F     N   PD  ++  LI G   A 
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825

Query: 182 RPTEAMQLYDSMLRNG 197
           R  EA  +++     G
Sbjct: 826 RAIEAYHVFEETRLKG 841



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 103/210 (49%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML     ++ A  +  ++   GL P+++T N ++   C   + + A ++FE  +     P
Sbjct: 400 MLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP 459

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NS+T+  LID   K+G +DDA  +F  ML+ G  AN V Y+ LI  +F     +    ++
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM      P++   +  +D + K G +E+    F        LPDV +Y+ILI G  KA
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKA 579

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  E   ++ +M + G   D    + + D
Sbjct: 580 GQARETSSIFHAMKQQGFALDARAYNAVVD 609



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 108/211 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F ++  RG +PD+   NT +        +++   +FE +      P+  +++ILI   
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G+  + + +F  M ++G   +   Y+ ++DG+ KS  +  A++V EEM    + P +
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  +IDGL K   ++EA   F  A    +  +V+ Y+ LI G+ K GR  EA  + + 
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           M++ G+ P+    ++L D  +++    E  I
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALI 727



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 12/232 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ AL L  ++    LEPDI+ YN  I  +     +D A + F +L    LKP+
Sbjct: 227 LAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPD 286

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T +I   CK GR+ +A  +F +M  +        Y+ +I GY  +   ++A+ + +
Sbjct: 287 DVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLD 346

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E    P++VS++ ++  L K+  ++EAL  F  A+     P+  TY I+I   C AG
Sbjct: 347 QLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFE-AMKKDAEPNSSTYNIIIDMLCMAG 405

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD-----------YNLQSSGSQEHC 222
           +  EA  + D M   G+ P+ L ++ + D           Y +  + SQ  C
Sbjct: 406 KVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC 457



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 91/199 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   LD A ++   +      P    Y  +I       + + A++L  ++  V  +  
Sbjct: 157 LVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVG 216

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT L+ A  +EGR++ A  +  ++     + ++V Y+  ID + K+ N+  A+  + 
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P+ VSY+ +I  LCK G + EA   F        +P    Y  +I GY  AG
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A +L D +   G +P
Sbjct: 337 QFENAYKLLDQLKERGCIP 355



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 83/168 (49%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++       RLD+A ++   +  ++ +P    +T+LI A  +  + + A  +  +M E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            +  V  ++ L+    +   ++ A  + +E+  + + P+IV Y++ ID   K G ++ A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             FH      L PD V+Y  +I   CKAGR +EA +L+  M     +P
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVP 320



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 73/150 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ AL  F  + +    P+  TY+ +I G C + + ++A   ++++    L PN
Sbjct: 716 LVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 775

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +I    K G + DA  +F +    G   +  +++ LI+G   +     A+ V+E
Sbjct: 776 VVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFE 835

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E        N+ +   L+D L K   +E+A
Sbjct: 836 ETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 64/141 (45%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A  +  R+DDA  + + M     +     Y+ LI    +++  + A ++  +M E  
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               +  ++ L+  L + G +E AL        + L PD+V Y + I  + KAG    A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + +  +   G+ PD +  +++
Sbjct: 273 KFFHELKSQGLKPDDVSYTSM 293


>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
          Length = 414

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 126/209 (60%), Gaps = 8/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNS 62
           +L  AL+L  ++T+ G  PD IT N ++ G C + ++++  ++  +L     C+   PN 
Sbjct: 97  NLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCM---PNV 153

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T +I  +CK GRM DA  +++ ML+ G + N VTY+ LI+GY K+ +M+SA  +Y +
Sbjct: 154 VTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQ 213

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +  ++  P++V+++ LIDG C+ G +++A+  +     +H+ P+V T++I+I   C   R
Sbjct: 214 LILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNR 273

Query: 183 PTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
             EA+ L   + +R  I+P   + + + D
Sbjct: 274 SAEALSLLRELNMRADIVPQTFIYNPIID 302



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 114/202 (56%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI       A+ LF      GL  PD+ ++N +I G C +  L +A++L E++T     P
Sbjct: 56  LIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSP 115

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDV 119
           ++IT  IL+D  C+  +++    +  ++   G    NVVTY+ +I GY K+  MK AF V
Sbjct: 116 DTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSV 175

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y +M ++   PN V+Y++LI+G  K   ME A+  +   + +   PDVVT+  LI GYC+
Sbjct: 176 YNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCR 235

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G+  +AM+++  M ++ I P+
Sbjct: 236 CGQLDDAMRIWMEMGQHHIQPN 257



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 103/190 (54%), Gaps = 7/190 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +++A++++ QL      PD++T+N++I GYC   +LD+A++++ ++    ++PN  
Sbjct: 200 KALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVY 259

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV----TYSCLIDGYFKSQNMKSAFDV 119
           TF+I+I + C + R  +A    S + E   +A++V     Y+ +ID   K   +  A  +
Sbjct: 260 TFSIIIHSLCTQNRSAEA---LSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLI 316

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M E    P+  +Y+ILI G C +G + EA+  FH  ++    PD +T    I    K
Sbjct: 317 VTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLK 376

Query: 180 AGRPTEAMQL 189
           AG P E  Q+
Sbjct: 377 AGMPNEVHQI 386



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A  +   + ++G  PD  TY  +I G+C   R+ EAV LF K+     +P
Sbjct: 303 ILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRP 362

Query: 61  NSITFTILIDAFCKEG 76
           ++IT    I    K G
Sbjct: 363 DNITINSFISCVLKAG 378



 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           +Y+ L++ L   G  ++A+  F   + + L  PDV ++ ++I+G C+ G   +A++L + 
Sbjct: 48  AYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVER 107

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   G  PD +  + L D
Sbjct: 108 MTEFGCSPDTITQNILVD 125


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A  L+ ++   G  PD++TY++I+ G C   RL EA +L  ++  + + PN +
Sbjct: 250 KQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHV 309

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG--------------------PK--------- 94
            +T LID+  K G   +A    S+++ +G                    PK         
Sbjct: 310 AYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRAL 369

Query: 95  ------ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                  N +TY+ LIDGY K  +M+    + +EM E +I+PN+++YS +I+G  K+G++
Sbjct: 370 SKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGIL 429

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA+      LD +++P+   YAILI GYCKAG+   A  LY+ M  +G+  + +L   L
Sbjct: 430 DEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVL 489

Query: 209 AD 210
            +
Sbjct: 490 VN 491



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 37/245 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ ++ + P++ITY++II GY     LDEA+ + +K+    + PN+  + ILID +C
Sbjct: 400 LLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYC 459

Query: 74  KEGRMDDATMMFSKMLEKGPKANVV----------------------------------- 98
           K G+ + AT ++++M   G K N V                                   
Sbjct: 460 KAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHV 519

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            Y+ L+DG+FK+    +A ++ EEM E +I  ++V+Y++LI+GL + G   EA   +   
Sbjct: 520 NYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGM 578

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           ++  L P+  TY I+I+ YCK G    A++L++ M  + IMP  +  +TL    L  +G 
Sbjct: 579 IEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV-VGLSEAGE 637

Query: 219 QEHCI 223
            E  +
Sbjct: 638 IEKAM 642



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 99/186 (53%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           LE D+ITY TII  YC  + L+EA  L+E++      P+ +T++ +++  CK+GR+ +A 
Sbjct: 234 LEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQ 293

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  +M + G   N V Y+ LID  FK+ +   AF    ++    ++ ++V  + L+DGL
Sbjct: 294 ELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGL 353

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            K    +EA   F      +L+P+ +TY  LI GYCK G       L   M    I P+ 
Sbjct: 354 FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNV 413

Query: 203 LLLSTL 208
           +  S++
Sbjct: 414 ITYSSI 419



 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A  +F  L+   L P+ ITY  +I GYC +  ++    L +++    + PN
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ +I+ + K+G +D+A  +  KML++    N   Y+ LIDGY K+   + A D+Y 
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYN 472

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + +  N V + +L++ L +   M+EA           LL D V Y  L+ G+ KAG
Sbjct: 473 EMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAG 532

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           + + A+ + + M    I  D      +  YN+  +G  EH
Sbjct: 533 KESAALNMVEEMTEKSIPFD------VVTYNVLINGLLEH 566



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+ +  +++  G+ P+++ +  ++       + +  +Q+ E+L  + LK N   + 
Sbjct: 637 EIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYN 696

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC+      AT +   M+  G  A+ VTY+ LI GY +S ++K A   Y +M   
Sbjct: 697 NLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNE 756

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SPNIV+Y++L+ GL   GLM E    F    +N L PD  TY  LI GY K G   E+
Sbjct: 757 GVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKES 816

Query: 187 MQLYDSMLRNGIMP 200
           ++LY  M+  G +P
Sbjct: 817 IRLYCEMVAQGFVP 830



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 29/218 (13%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQ----LFEKLTCVQLKPNSITFTILIDAFC 73
           L +  +E D +TYNT+I G+C    +++A      + +K TC     ++IT  IL+  FC
Sbjct: 68  LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCF----DTITCNILVKGFC 123

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G       +   ++  G   +V+ ++ LIDGY K+  M  A D+ E M +  +  +IV
Sbjct: 124 RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN---------------------HLLPDVVTYAI 172
           SY+ LI+G CKRG  ++A    H   ++                     +L  D++TY  
Sbjct: 184 SYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTT 243

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +I  YCK     EA  LY+ M+ NG +PD +  S++ +
Sbjct: 244 IISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVN 281



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 21/216 (9%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D IT N ++ G+C +       ++ + L       + I F  LID +CK G M  A  + 
Sbjct: 111 DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLV 170

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN------------------- 126
            +M ++G  +++V+Y+ LI+G+ K      A  +  E+ E+                   
Sbjct: 171 ERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDD 230

Query: 127 --NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             N+  ++++Y+ +I   CK+  +EEA   +   + N  LPDVVTY+ ++ G CK GR +
Sbjct: 231 NLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLS 290

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           EA +L   M + G+ P+ +  +TL D   ++  + E
Sbjct: 291 EAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWE 326



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 21/228 (9%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--------- 54
           K   +  AL L  ++   GL  DI++YNT+I G+C     D+A  L  +++         
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSV 218

Query: 55  ------------CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
                        + L+ + IT+T +I  +CK+  +++A  ++ +M+  G   +VVTYS 
Sbjct: 219 FFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSS 278

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           +++G  K   +  A ++  EM +  + PN V+Y+ LID L K G   EA       +   
Sbjct: 279 IVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRG 338

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  D+V    L+ G  K+ +P EA  ++ ++ +  ++P+ +  + L D
Sbjct: 339 MTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 98/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++  + + GL P+  TYN +I  YC    LD A++L+ ++   ++ P+SIT   L+ 
Sbjct: 571 AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVV 630

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              + G ++ A  + ++M   G   N+V +  L++   KS    +   ++E++ +  +  
Sbjct: 631 GLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKI 690

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+ LI   C+  + ++A       + +  + D VTY  LIRGYC++    +A+  Y
Sbjct: 691 NQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATY 750

Query: 191 DSMLRNGIMPD 201
             ML  G+ P+
Sbjct: 751 TQMLNEGVSPN 761



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD AL+L+ ++    + P  IT NT++ G      +++A+ +  +++ + + PN +
Sbjct: 599 KQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLV 658

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
              +L++A  K G+ +    M  ++++ G K N   Y+ LI  + + +  K A  V + M
Sbjct: 659 IHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYM 718

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +    + V+Y+ LI G C+   +++AL  +   L+  + P++VTY +L+ G   AG  
Sbjct: 719 IRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLM 778

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L+D M  NG+ PD     TL
Sbjct: 779 AERDELFDKMKENGLNPDASTYDTL 803



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 100/197 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    +A L++  QL D GL+ +   YN +I  +C L    +A  + + +       +++
Sbjct: 669 KSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTV 728

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +C+   +  A   +++ML +G   N+VTY+ L+ G   +  M    +++++M
Sbjct: 729 TYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKM 788

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN ++P+  +Y  LI G  K G  +E++  +   +    +P   TY +LI  + K G+ 
Sbjct: 789 KENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKM 848

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A +L + M   G+ P
Sbjct: 849 DQARELLNEMQVRGVPP 865



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
            + P++ T+N ++  +C +  L  A+ L   L  V ++ +++T+  +I  FC+ G ++ A
Sbjct: 40  AVPPNVYTHNVLVHAWCKMGNLILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQA 96

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
               S M++K    + +T + L+ G+ +    K    + + +       +++ ++ LIDG
Sbjct: 97  FGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDG 156

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            CK G M  AL          LL D+V+Y  LI G+CK G   +A  L
Sbjct: 157 YCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSL 204



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 3/184 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P ++ +N +I  + +   + +   ++ ++ C  + PN  T  +L+ A+CK G +  A  +
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL 67

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              +     + + VTY+ +I G+ +   +  AF     M + +   + ++ +IL+ G C+
Sbjct: 68  LRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCR 124

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL +         +      DV+ +  LI GYCKAG  + A+ L + M + G++ D + 
Sbjct: 125 IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS 184

Query: 205 LSTL 208
            +TL
Sbjct: 185 YNTL 188



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL  + Q+ + G+ P+I+TYN ++ G      + E  +LF+K+    L P++ T+ 
Sbjct: 742 HVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYD 801

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  + K G   ++  ++ +M+ +G      TY+ LI  + K   M  A ++  EM   
Sbjct: 802 TLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVR 861

Query: 127 NISPNIVSYSILIDGLC 143
            + P+  +Y ILI G C
Sbjct: 862 GVPPSSSTYDILICGWC 878



 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +++L+ ++  +G  P   TYN +I  +  + ++D+A +L  ++    + P+S T+ ILI 
Sbjct: 816 SIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILIC 875

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            +C   +  D      K+     K N++T
Sbjct: 876 GWCNLSKHPDLDRTLKKIYRTDAK-NLIT 903



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 12/100 (12%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---LD---------EAVQLFEKLTC 55
           +D A +L  ++  RG+ P   TY+ +ICG+C+L++   LD         +A  L  ++  
Sbjct: 848 MDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMND 907

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
               P   T   +   F + G+M DA  +  ++     K+
Sbjct: 908 KGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHANKS 947


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 114/202 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+ +  Q+ + G++PD++ Y TII   C    ++ A+ LF+++    ++P+ + +T
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C  GR  DA  +   M ++  K +V+T++ LID + K      A ++Y EM   
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +I+PNI +Y+ LI+G C  G ++EA   F+        PDVV Y  LI G+CK  +  +A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M+++  M + G+  + +  +TL
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTL 358



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 115/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H++ AL LF Q+ + G+ PD++ Y +++ G C+  R  +A  L   +T  ++KP+
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LIDAF KEG+  DA  ++++M+      N+ TY+ LI+G+     +  A  ++ 
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ LI+G CK   +++A+  F+      L  + +TY  LI+G+ + G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +P  A +++  M+  G+ P+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPN 386



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 122/204 (59%), Gaps = 3/204 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A ++F  +  +G  PD++ Y ++I G+C   ++D+A+++F +++   L  N+IT+T 
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-- 125
           LI  F + G+ + A  +FS M+ +G   N+ TY+ L+     +  +K A  ++E+M +  
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417

Query: 126 -NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + ++PNI +Y++L+ GLC  G +E+AL  F       +   ++TY I+I+G CKAG+  
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A+ L+ S+   G+ P+ +  +T+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTM 501



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 3/197 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE     A +L+ ++    + P+I TY ++I G+C    +DEA Q+F  +      P+
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI+ FCK  ++DDA  +F +M +KG   N +TY+ LI G+ +      A +V+ 
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL---LPDVVTYAILIRGYC 178
            M    + PNI +Y++L+  LC  G +++AL  F       +    P++ TY +L+ G C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436

Query: 179 KAGRPTEAMQLYDSMLR 195
             G+  +A+ +++ M +
Sbjct: 437 YNGKLEKALMVFEDMRK 453



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 108/203 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L   L   G+  D+ T N ++  +C  ++   A     K+  +  +P+ +TFT 
Sbjct: 88  FDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTS 147

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC   RM++A  M ++M+E G K +VV Y+ +ID   K+ ++  A  ++++M    
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++V Y+ L++GLC  G   +A           + PDV+T+  LI  + K G+  +A 
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +LY+ M+R  I P+    ++L +
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLIN 290



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 106/191 (55%), Gaps = 3/191 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +T R ++PD+IT+N +I  +    +  +A +L+ ++  + + PN  T+T LI+ FC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            EG +D+A  MF  M  KG   +VV Y+ LI+G+ K + +  A  ++ EM +  ++ N +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ LI G  + G    A   F   +   + P++ TY +L+   C  G+  +A+ +++ M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413

Query: 194 LR---NGIMPD 201
            +   +G+ P+
Sbjct: 414 QKREMDGVAPN 424



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 102/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + AL LF  + +    P II +  ++     + + D  + L + L  + +  +  T  
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++ FC+  +   A+    KM++ G + ++VT++ LI+G+     M+ A  +  +M E 
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++V Y+ +ID LCK G +  AL  F    +  + PDVV Y  L+ G C +GR  +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   M +  I PD +  + L D
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALID 255



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 84/151 (55%), Gaps = 3/151 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL---KPNSITF 65
           + A ++F  +  RG+ P+I TYN ++   C   ++ +A+ +FE +   ++    PN  T+
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +L+   C  G+++ A M+F  M ++     ++TY+ +I G  K+  +K+A +++  +  
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
             + PN+V+Y+ +I GL + GL  EA   F 
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 8   LDAALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +  AL +F  +  R   G+ P+I TYN ++ G C   +L++A+ +FE +   ++    IT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +TI+I   CK G++ +A  +F  +  KG K NVVTY+ +I G F+      A  ++ +M 
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522

Query: 125 ENNIS 129
           E+ +S
Sbjct: 523 EDGVS 527


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D A +LF+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 368 SVDAEKMLREMLSVGLKPD 386



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD A  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 358



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G  P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMHRDGHAP------SVVTYNVLMNG 431



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 297 DLKQAHDLIDEMSMKGLKPDKFTYTTLID 325



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 18/198 (9%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS------------------ITFTILID 70
           +Y T+I   C+   L EA  L E +   + K ++                    F+ LI 
Sbjct: 21  SYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLIT 80

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ E     
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   E  +L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 191 DSMLRNGIMPDGLLLSTL 208
            +ML +G+ PD    S L
Sbjct: 201 SAMLASGVQPDVYTYSVL 218


>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 8/208 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNSI 63
           +  AL+L  ++ + G  PD +T+N ++ G C    + +  ++  +L     C+   PN +
Sbjct: 250 VQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCM---PNVV 306

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I  +CK GRM+DA  +++ M+  G   NVVTY+ LI+GY K+ NM SA  VY++M
Sbjct: 307 TYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQM 366

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++V++S LIDG C+ G +++A+  +      H+ P+  T+ I+I  +CK  R 
Sbjct: 367 ILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRS 426

Query: 184 TEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
            EA+     M +R  I P   + + + D
Sbjct: 427 GEALHFLKKMNMRTDIAPQAFIYNPVID 454



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 2/204 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           + I    +  A+ LF      G+  PD+ ++N +I G C +  + +A++L E++      
Sbjct: 207 LFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCS 266

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFD 118
           P+++T  IL++  C+   +     +  ++   G    NVVTY+ +I GY K+  M+ A  
Sbjct: 267 PDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMA 326

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           VY +M     SPN+V+Y++LI+G  K G M  A+  +   +    LPDVVT++ LI GYC
Sbjct: 327 VYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYC 386

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDG 202
           + G+  +AM+++  M +  I P+ 
Sbjct: 387 RCGQLDDAMKIWTEMAQYHIQPNA 410



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 1/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A+ ++  +   G  P+++TYN +I GY     +  AV +++++   +  P+ +
Sbjct: 317 KAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVV 376

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA  ++++M +   + N  T+  +I  + K      A    ++M
Sbjct: 377 TFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKM 436

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P    Y+ +ID LCK G ++EA        +    PD  TY ILI G+C  GR
Sbjct: 437 NMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGR 496

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             EA+  +  M+  G  PD +++++     L+S    E
Sbjct: 497 IAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGE 534



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 6/206 (2%)

Query: 7   HLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSIT 64
           H DA L+LF Q+TD+ G  P+   + + + G C+   L +A      K +       +  
Sbjct: 143 HTDA-LQLFDQMTDQSGYFPNA-RFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYA 200

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  L+D F   GR+ DA  +F   ++ G    +V +++ +I G  K  +++ A ++ E M
Sbjct: 201 YNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERM 260

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGR 182
            E   SP+ V+++IL++GLC+   + +          D   +P+VVTY  +I GYCKAGR
Sbjct: 261 DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGR 320

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +AM +Y+ M+  G  P+ +  + L
Sbjct: 321 MEDAMAVYNDMVAVGTSPNVVTYNVL 346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 36/76 (47%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A  +  ++ ++G  PD  TY  +I G+C   R+ EAV  F K+      P
Sbjct: 455 VLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSP 514

Query: 61  NSITFTILIDAFCKEG 76
           +SI     I    K G
Sbjct: 515 DSIVVNSFISCLLKSG 530


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++ +
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI+  CK  +MDDA  +F +ML+ G   N VT++ LIDG+ K++ +  A ++Y+
Sbjct: 206 VYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYK 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   ++SP++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +    M++  I  D +  + L
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTAL 352



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++ D+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK  R+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 114/199 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +LF ++ D GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 216 LCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L P++ TY ++I  +C+ G
Sbjct: 336 RMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                ++L   M R+G MP
Sbjct: 396 DVWTGLKLLKEMQRDGYMP 414



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 104/191 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +     +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + M   G +++V TYS LI+G  K+  M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK   ++ A+  +   L   L PD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 97/185 (52%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           DI  ++ +I  Y     L +A++ +  +   + +    T   +++   K          +
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            + LE G  A++  ++ L+  + K   ++ A  V++ + + ++ P++VS++ L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++E     +    + +  DV TY++LI G CKA +  +A +L+D ML NG++P+G+  
Sbjct: 185 GDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTF 244

Query: 206 STLAD 210
           +TL D
Sbjct: 245 TTLID 249



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + +  ++ +   + +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   P++V+
Sbjct: 406 EMQRDGYMPSVVT 418


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 115/198 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++P++ITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +C+  RMDDA  +F +M+  G   N++TY+ ++ G F ++   +A ++Y  +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++     + +Y+I++ GLCK  L +EAL  F       L  +  T+ I+I    K GR 
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  L+ +   NG++P+
Sbjct: 668 DEAKDLFVAFSSNGLVPN 685



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 113/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGLEPDI TY T++ GY +   L E   L + +    + P+   F ILI 
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++D+A ++FSKM + G   NVVTY  +I    KS ++  A   +E+M +  ++P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI+ Y+ LI  LC     ++A       LD  +  + + +  +I  +CK GR  E+ +L+
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+R G+ P+ +  STL D
Sbjct: 500 DLMVRIGVKPNVITYSTLID 519



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 115/218 (52%), Gaps = 4/218 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   + IT+  ++ G C+  R  +A+ +   ++T +   P+  + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           TIL+   C E R  +A  +   M +    G   +VV+Y+ +I+G+FK  +   A+  Y E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  ISP++V+YS +I  LCK   M++A+      + N ++P+ +TY  ++ GYC + +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           P EA+     M  +G+ PD +  ++L DY  ++  S E
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++   GL P+++TY  +I   C    +D+A+  FE++    L PN I
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T LI + C   + D A  +  +ML++G   N + ++ +I  + K   +  +  +++ M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN+++YS LIDG C  G M+EA           + PD VTY  LI GYC+  R 
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M+ +G+ P+
Sbjct: 563 DDALALFKEMVSSGVSPN 580



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 111/197 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A+  F Q+ D GL P+II Y ++I   C  ++ D+A +L  ++    +  
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +I + CKEGR+ ++  +F  M+  G K NV+TYS LIDGY  +  M  A  + 
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+Y+ LI+G C+   M++AL  F   + + + P+++TY I+++G    
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  + ++G
Sbjct: 595 RRTAAAKELYVGITKSG 611



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           AL+L   + D    G  PD+++Y T+I G+      D+A   + ++   ++ P+ +T++ 
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A CK   MD A  + + M++ G   N +TY+ ++ GY  S+  K A    ++M  + 
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y+ L+D LCK G   EA   F       L PD+ TY  L++GY   G   E  
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMH 356

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L D M+RNGI PD  + + L
Sbjct: 357 ALLDLMVRNGIHPDHHVFNIL 377



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ P+ +TYN+I+ GYCS  +  EA+   +K+    ++P+
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G + ++ TY  L+ GY     +     + +
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+   ++ILI    K+  ++EA+  F     + L P+VVTY  +I   CK+G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +AM  ++ M+  G+ P+ ++ ++L
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSL 447



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 106/207 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TYNT+I GYC ++R+D+A+ LF+++    + PN IT+ I
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++       R   A  ++  + + G +  + TY+ ++ G  K+     A  +++ +C  +
Sbjct: 587 ILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+I  L K G  +EA   F     N L+P+  TY ++       G   E  
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           QL+ SM  NG   D  +L+ +    LQ
Sbjct: 707 QLFFSMEDNGCTVDSGMLNFIVRELLQ 733



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 43/233 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           A  +F +L  RG    I   N  +    + +    AV  + ++      ++ P   T+ I
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALAD-VARHSPAAAVSRYNRMARAGAGKVTPTVHTYGI 92

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LI   C+ GR+D        +++KG +   +T++ L+ G    +    A D+        
Sbjct: 93  LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152

Query: 121 -------------EEMCENNIS-------------------PNIVSYSILIDGLCKRGLM 148
                        + +C+ N S                   P++VSY+ +I+G  K G  
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           ++A   +H  LD  + PDVVTY+ +I   CK     +AM++  +M++NG+MP+
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 79/180 (43%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL LF ++   G+ P+IITYN I+ G     R   A +L+  +T    +    T+ 
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++   CK    D+A  MF  +     +    T++ +I    K      A D++     N
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSN 680

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN  +Y ++ + +  +GL+EE    F    DN    D      ++R   + G  T A
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 111/202 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +F Q+ D+G++PD  TYN +I GY S+ +  E V++ E+++   LKP+  T+  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C  GR  +A   F  M+ KG K NV  Y  LI GY     +    D+   M EN 
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP+   ++I+     K+ +++EA++ F+      L PDVV +  LI   CK GR  +A+
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAV 433

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
             ++ M+  G+ P+  + ++L 
Sbjct: 434 LKFNQMMNEGVAPNIFVFNSLV 455



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 106/191 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +   G  PD+I+Y T+I G+C + R+DEA +  + +  V LKP+  T+  L+ 
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ GR+DDA  +F +ML  G    VVTYS ++ G F ++    A ++Y  M  +    
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI  Y+I+++GL K   ++EA   F          ++ T+ I+I    K+GR  +AM L+
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681

Query: 191 DSMLRNGIMPD 201
            ++   G++PD
Sbjct: 682 ATISSYGLVPD 692



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 5   ECHLDAALKLFGQLTD---RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           E   + AL+L   + D   R   P++++Y T+I G+ +  ++D+A  LF ++    ++PN
Sbjct: 178 EKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPN 237

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID  CK   +D A  +F +M++KG K +  TY+CLI GY      K    + E
Sbjct: 238 VVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLE 297

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + P+  +Y  L++ LC  G   EA + F   +   + P+V  Y ILI GY   G
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKG 357

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             +E   L + M+ NG+ PD
Sbjct: 358 ALSEMHDLLNLMVENGLSPD 377



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 106/230 (46%), Gaps = 35/230 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   + + GL PD   +N I   Y     +DEA+ +F K+    L P+ + F  LIDA C
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALC 424

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+DDA + F++M+ +G   N+  ++ L+ G       + A + Y EM    I P++V
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484

Query: 134 -----------------------------------SYSILIDGLCKRGLMEEALYAFHCA 158
                                              SY+ LI G C  G ++EA  +    
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           L   L PD  TY  L+ GYC+AGR  +A  ++  MLRNGI P  +  ST+
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
            L+     FG +   G   + I  N ++ G C   RL EA+  L +++  +   P+ +++
Sbjct: 109 RLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSY 168

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKA---NVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             L+  FC E R ++A  +   M +   ++   NVV+Y+ +I+G+F    +  A++++ E
Sbjct: 169 NTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLE 228

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I PN+V+Y+ +IDGLCK  +++ A   F   +D  + PD  TY  LI GY   G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             E +++ + M  +G+ PD     +L +Y
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 105/203 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A K    +   GL+PD  TYNT++ GYC   R+D+A  +F ++    + P  +T++
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++       R  +A  ++  M+  G + N+  Y+ +++G  K+  +  AF +++ +C  
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +    I +++I+I  L K G  E+A++ F       L+PDV TY ++     + G   E 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
             L+ +M ++G  P+  +L+ L 
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALV 735



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            +++  +++  GL+PD  TY +++   C+  R  EA   F+ +    +KPN   + ILI 
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIH 351

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  +G + +   + + M+E G   +   ++ +   Y K   +  A  ++ +M +  +SP
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V++  LID LCK G +++A+  F+  ++  + P++  +  L+ G C   +  +A + Y
Sbjct: 412 DVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY 471

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  GI PD +  +T+
Sbjct: 472 FEMLNQGIRPDVVFFNTI 489



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 104/189 (55%), Gaps = 1/189 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK F Q+ + G+ P+I  +N+++ G C++++ ++A + + ++    ++P+ + F  +
Sbjct: 431 DAVLK-FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C +G++  A  +   M   G + +V++Y+ LI G+     +  A    + M    +
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+  +Y+ L+ G C+ G +++A   F   L N + P VVTY+ ++ G     R +EA +
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 189 LYDSMLRNG 197
           LY +M+ +G
Sbjct: 610 LYLNMITSG 618



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYC-------SLNRLDEAVQLFEKLT---CVQ 57
           LD ALKLF  L        II +N ++           S    +  V LF ++     ++
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+  T++ILI  FC+ GR++     F  +L+ G + N +  + L+ G   ++ ++ A 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 118 DVY-EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL---PDVVTYAIL 173
           D+  + M E   +P++VSY+ L+ G C     EEAL   H   D+      P+VV+YA +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I G+   G+  +A  L+  M+  GI P+ +  +T+ D
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 97/195 (49%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            F  +  +G++P++  Y  +I GY +   L E   L   +    L P+   F I+  A+ 
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K+  +D+A  +F+KM ++G   +VV +  LID   K   +  A   + +M    ++PNI 
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ L+ GLC     E+A   +   L+  + PDVV +  ++   C  G+  +A +L D M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 194 LRNGIMPDGLLLSTL 208
            R G  PD +  +TL
Sbjct: 510 ERVGTRPDVISYTTL 524



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L+  +   G + +I  YN I+ G    N +DEA +LF+ L     +    TF I+I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K GR +DA  +F+ +   G   +V TY  + +   +   ++   D++  M ++  +P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 131 NIVSYSILIDGLCKRGLMEEA 151
           N    + L+  L  RG +  A
Sbjct: 727 NSRMLNALVRRLLHRGDITRA 747



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KLF  L  +  + +I T+N +I       R ++A+ LF  ++   L P+  T+ +
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   +FS M + G   N    + L+       ++  A     ++ E N
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKN 758

Query: 128 ISPNIVSYSILIDGLCK 144
            S    + ++LI  L +
Sbjct: 759 FSLEASTTAMLISLLSR 775


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  ++  + + P + TY +I+ G   ++RLDEA  LFE+     ++ N
Sbjct: 605 LCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELN 664

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I ++ LID F K GR+D+A ++  +M++KG   NV T++ L+D   K++ +  A   ++
Sbjct: 665 VILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQ 724

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   SPN  +YSILI+GLC+     +A   +       L+P+VVTY  +I G  K G
Sbjct: 725 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVG 784

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             T+A  L++    NG +PD    + L
Sbjct: 785 NITDAYSLFERFKTNGGIPDSASFNAL 811



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 108/195 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  ++ +G   D   YN ++ G C   ++D+A ++ E++    + P   T+  ++D   
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  R+D+A M+F +   KG + NV+ YS LIDG+ K   +  A+ + EEM +  ++PN+ 
Sbjct: 642 KIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 701

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ L+D L K   ++EAL  F    +    P+  TY+ILI G C+  +  +A   +  M
Sbjct: 702 TWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 761

Query: 194 LRNGIMPDGLLLSTL 208
            + G++P+ +  +T+
Sbjct: 762 QKQGLIPNVVTYTTM 776



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 104/196 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF +   +G+E ++I Y+++I G+  + R+DEA  + E++    L PN
Sbjct: 640 LAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 699

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+DA  K   +D+A + F  M E     N  TYS LI+G  + Q    AF  ++
Sbjct: 700 VYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 759

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN+V+Y+ +I GL K G + +A   F     N  +PD  ++  LI G   A 
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNAN 819

Query: 182 RPTEAMQLYDSMLRNG 197
           RP EA Q+++     G
Sbjct: 820 RPMEAYQVFEETRLRG 835



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 109/210 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML     ++ A K+  ++   GL P++++ N ++   C  N+L+EA ++FE  +     P
Sbjct: 394 MLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP 453

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NS+T+  LID   K+G++DDA  +F KML+ G  AN + Y+ LI  +F     +    +Y
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIY 513

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM      P++   +  +D + K G +E+    F        LPDV +Y+ILI G  KA
Sbjct: 514 KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKA 573

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  E   ++ +M + G   D    + + D
Sbjct: 574 GQARETSNIFQAMSQQGFALDARAYNAVVD 603



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             D A KL  +L +RG  P ++++N+I+       ++DEA+ LF+ +     KPN  T+ 
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYN 389

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID  C  GR+++A  +  +M   G   N+++ + ++D   K+  ++ A  ++E   E 
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +PN V+Y  LIDGL K+G +++A   F   LD     + + Y  LIR +   GR  + 
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            ++Y  M+R G  PD  LL+T  D
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMD 533



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ AL L  ++    LEPDI+ YN  I  +     +D A + F +L    L+P+
Sbjct: 221 LAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPD 280

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T ++   CK GR+ +A  +F +M  +        Y+ +I GY  ++    A+ + E
Sbjct: 281 DVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLE 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + E    P++VS++ ++  L K+  ++EAL  F   +     P++ TY I+I   C AG
Sbjct: 341 RLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDV-MKKDAKPNISTYNIIIDMLCMAG 399

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA ++ D M   G+ P+ L ++ + D
Sbjct: 400 RVNEAYKIRDEMELAGLFPNLLSVNIMVD 428



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 102/209 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A ++F   ++RG  P+ +TY ++I G     ++D+A +LFEK+       N
Sbjct: 430 LCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +T LI  F   GR +D   ++ +M+ +G + ++   +  +D  FK+  ++    ++E
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE 549

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      P++ SYSILI GL K G   E    F          D   Y  ++ G CK+G
Sbjct: 550 DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSG 609

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A ++ + M    + P      ++ D
Sbjct: 610 KVDKAYEVLEEMKVKHVHPTVATYGSIVD 638



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 102/198 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++  RG  PD+   NT +        +++   +FE +      P+  +++ILI   
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G+  + + +F  M ++G   +   Y+ ++DG  KS  +  A++V EEM   ++ P +
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  ++DGL K   ++EA   F  A    +  +V+ Y+ LI G+ K GR  EA  + + 
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M++ G+ P+    ++L D
Sbjct: 691 MMKKGLTPNVYTWNSLMD 708



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 94/199 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+ A ++ G +      P    Y  +I       + + A++L  ++  V  + +
Sbjct: 151 LVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVS 210

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT L+ A  +EG+M+ A  +  ++     + ++V Y+  ID + K+ ++  A+  + 
Sbjct: 211 VPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFH 270

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  + + P+ VSY+ ++  LCK G + EA   F        +P    Y  +I GY  A 
Sbjct: 271 ELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  +A +L + +   G +P
Sbjct: 331 RFDDAYKLLERLRERGCIP 349



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D AL  F  + +    P+  TY+ +I G C + + ++A   ++++    L PN
Sbjct: 710 LVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPN 769

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +I    K G + DA  +F +    G   +  +++ LI+G   +     A+ V+E
Sbjct: 770 VVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFE 829

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E        N+ +   L+D L K   +E+A
Sbjct: 830 ETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 64/141 (45%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+    +  R++DA  +   M     +     Y+ LI    +++  + A ++  +M +  
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++  ++ L+  L + G ME AL        + L PD+V Y + I  + KAG    A 
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + +  +  +G+ PD +  +++
Sbjct: 267 KFFHELKAHGLRPDDVSYTSM 287


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNS 62
            +  AL+L  ++ + G  PD +T+N I+ G C  N +    ++  +L     C+   PN 
Sbjct: 264 QVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCM---PNV 320

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT +I  +CK G+++DA  +++ M+  G   N VTY+ LI+GY K  ++ SA +VY++
Sbjct: 321 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 380

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      P++V++S LIDG C+ G +++AL  +     + + P+V T++I+I   CK  R
Sbjct: 381 MTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNR 440

Query: 183 PTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
             EA++L + + LR  I P   + + + D
Sbjct: 441 SDEAIRLLNELNLRPDIAPQAFIYNPVID 469



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 1/204 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+ ++  +   G+ P+ +TYN +I GY  +  L  AV++++++T ++  P+ +
Sbjct: 332 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA  ++S M +   + NV T+S +I    K      A  +  E+
Sbjct: 392 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNEL 451

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P    Y+ +ID LCK G ++EA        +    PD  TY ILI GYC   R
Sbjct: 452 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 511

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLS 206
            +EA+  +  M+  G  PD + ++
Sbjct: 512 ISEAIMFFHEMVEAGCSPDSITVN 535



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 112/202 (55%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQ-LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI    +   + LF + + DR   PD+ ++N +I G C + ++ +A++L E++      P
Sbjct: 223 LIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSP 282

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDV 119
           +++T  I++D  C+   +     +  ++   G    NVVT++ +I GY K+  ++ A  V
Sbjct: 283 DTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 342

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y +M  + I PN V+Y++LI+G  K G +  A+  +         PDVVT++ LI GYC+
Sbjct: 343 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 402

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G+  +A++++  M ++ I P+
Sbjct: 403 CGQLDDALRIWSDMAQHRIQPN 424



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFT 66
           LDA+  L  + ++ G   +   YN ++       R+ + V LFE+    +L  P+  +F 
Sbjct: 194 LDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFN 253

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   C+ G++  A  +  +M E G   + VT++ ++DG  ++  +    +V   +  +
Sbjct: 254 VVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRD 313

Query: 127 NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN+V+++ +I G CK G +E+A+  ++  + + ++P+ VTY +LI GY K G    
Sbjct: 314 GVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGS 373

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++Y  M R    PD +  S+L D
Sbjct: 374 AVEVYQQMTRLRCPPDVVTFSSLID 398



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 1/179 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A++++ Q+T     PD++T++++I GYC   +LD+A++++  +   +++PN  TF+I
Sbjct: 371 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 430

Query: 68  LIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +I + CK+ R D+A  + +++ L          Y+ +ID   K   +  A  + + M E 
Sbjct: 431 IIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 490

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              P+  +Y+ILI G C +  + EA+  FH  ++    PD +T    I    KAG P E
Sbjct: 491 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 549



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 1/145 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITF 65
            LD AL+++  +    ++P++ T++ II   C  NR DEA++L  +L     + P +  +
Sbjct: 405 QLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIY 464

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +ID  CK G++D+A ++   M EKG + +  TY+ LI GY     +  A   + EM E
Sbjct: 465 NPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 524

Query: 126 NNISPNIVSYSILIDGLCKRGLMEE 150
              SP+ ++ +  I  L K G+  E
Sbjct: 525 AGCSPDSITVNCFISCLLKAGMPNE 549



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 75/239 (31%)

Query: 45  EAVQLFEKLTC--VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVT 99
            A+ +F  L C  + + P++ +   +I   C+ GR  DA  +F +M       P A  ++
Sbjct: 123 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLS 182

Query: 100 ------------------------YSCLIDGYFKSQNMKS---------AFDVYEEMCEN 126
                                   + C ++ Y  ++ M S            ++E   ++
Sbjct: 183 FLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 242

Query: 127 NI-SPNIVSYSILIDGLCKRGLMEEALY------AFHCALD--------------NHL-- 163
            + SP++ S++++I G+C+ G +++AL        F C+ D              N +  
Sbjct: 243 RLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSR 302

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                         +P+VVT+  +I GYCKAG+  +AM +Y+ M+ +GIMP+ +  + L
Sbjct: 303 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 361


>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
          Length = 238

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 116/206 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           + C +  A+K++ ++T  G  P IITYNT+I G C   +  EA  L +++     KP+  
Sbjct: 22  RACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIR 81

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   C+  ++D A  +++++L+ G + +V+ ++ LI G   +  +  AF +Y EM
Sbjct: 82  TYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHGLCSAGKVNDAFCIYLEM 141

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E N SPN+V+Y+ L+DG  + G ++ A   +   LDN L PD+VTY   I+G C   R 
Sbjct: 142 KEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSCNRT 201

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            E + L + +L  GIMP  +  S L 
Sbjct: 202 PEGVLLLNEVLATGIMPSVITWSILV 227



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 100/171 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++ +RG +PDI TY ++I G C + ++D A+ ++ ++    ++ + I   ILI 
Sbjct: 64  ASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIH 123

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G+++DA  ++ +M EK    N+VTY+ L+DG+++  ++ +A  ++  + +N + P
Sbjct: 124 GLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKP 183

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +IV+Y+  I GLC      E +   +  L   ++P V+T++IL+R   + G
Sbjct: 184 DIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVRAVIRYG 234



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 107/196 (54%), Gaps = 6/196 (3%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G +P+   YN +I G+C   ++ +AV+++ ++T     P  IT+  LID  CK  +  +A
Sbjct: 5   GCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEA 64

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           + +  +MLE+G K ++ TY  LI G  + + + +A  ++ E+ +  I  +++ ++ILI G
Sbjct: 65  SSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHG 124

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC  G + +A   +    + +  P++VTY  L+ G+ + G    A  L+ ++L NG+ PD
Sbjct: 125 LCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPD 184

Query: 202 GLLLSTLADYNLQSSG 217
                 +  YN +  G
Sbjct: 185 ------IVTYNTRIKG 194



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 81/142 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAAL ++ ++ D G++ D+I +N +I G CS  ++++A  ++ ++      PN +T+  
Sbjct: 96  IDAALCIWNEILDAGIQVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNT 155

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D F + G +D A  +++ +L+ G K ++VTY+  I G            +  E+    
Sbjct: 156 LMDGFYEIGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 215

Query: 128 ISPNIVSYSILIDGLCKRGLME 149
           I P+++++SIL+  + + G ++
Sbjct: 216 IMPSVITWSILVRAVIRYGPIQ 237



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M++ G K N   Y+ LI+G+ ++  +  A  +Y EM  N   P I++Y+ LIDGLCK   
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
            +EA       L+    PD+ TY  LIRG C+  +   A+ +++ +L  GI  D +++  
Sbjct: 61  YQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVD-VIVHN 119

Query: 208 LADYNLQSSG 217
           +  + L S+G
Sbjct: 120 ILIHGLCSAG 129


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L     L  Q+ + GL P+  TYN ++ GYC L  L EA ++ E +T   + P+
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  ++   C EG++D+A  +  KM       +VVTY+ LIDG F+ +   +AF + E
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N V+++I+I   C  G ++EA       +++   PD  TY  +I GYCKAG
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA ++ D M R G+  D   L+TL
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTL 462



 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 108/197 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +D A  +  ++ + G  PD  TYNT+I GYC   ++ EA ++ +++    LK ++ T
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
              L+   C E ++DDA  +  K  ++G   + VTY  LI GYFK +    A  ++EEM 
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E  I   I++Y+ +I GLC  G  ++A+   +  L+  L+PD  T  I+I GYC  G   
Sbjct: 519 ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVE 578

Query: 185 EAMQLYDSMLRNGIMPD 201
           +A Q ++ M+ + + PD
Sbjct: 579 KAFQFHNKMVEHSLKPD 595



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 102/197 (51%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  LD A  L  +   RG   D +TY T+I GY    + D A++L+E++    +    IT
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIIT 528

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +I   C  G+ D A    +++LEKG   +  T + +I GY     ++ AF  + +M 
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+++ P+I + +IL+ GLC+ G++E+ L  F+  +      D VTY I+I  +CK  R  
Sbjct: 589 EHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLE 648

Query: 185 EAMQLYDSMLRNGIMPD 201
           +A  L   M    + PD
Sbjct: 649 DAFDLMTEMEGKNLEPD 665



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 6/208 (2%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +D A++L  ++    L PD++TYNT+I G       D A +L E++    +K N +T
Sbjct: 329 EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVT 388

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
             I+I  FC EG++D+A+ +  KM+E G   +  TY+ +I+GY K+  M  A+ + +EM 
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMG 448

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              +  +  + + L+  +C    +++A      A     + D VTY  LI GY K  +  
Sbjct: 449 RKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQAD 508

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYN 212
            A++L++ M   GI      ++T+  YN
Sbjct: 509 RALKLWEEMKETGI------VATIITYN 530



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 11/201 (5%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+    +L ++GL PD  T N II GYC    +++A Q   K+    LKP+  T  IL
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C+EG ++    +F+  + KG   + VTY+ +I  + K + ++ AFD+  EM   N+
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662

Query: 129 SPNIVSYSILIDGLCKRGLMEEA-LYAFHCALDNHLL------PDVVT----YAILIRGY 177
            P+  +Y+ ++ GL K G  EEA   A   A     +      P++ T    Y+  I   
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722

Query: 178 CKAGRPTEAMQLYDSMLRNGI 198
           C  G+  +AM+L+    + G+
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGV 743



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAV---QLFEKLTCVQLKP 60
           K+ HL    ++F ++      P+++T NT++      N     V   ++F+    + ++P
Sbjct: 152 KQPHL--GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQP 209

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  TF ILI  +C +   ++A  + ++M E G   + VTY+ ++    K   +    D+ 
Sbjct: 210 NVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLL 269

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M  + + PN  +Y+IL+ G CK   ++EA           +LPDV TY  ++RG C  
Sbjct: 270 LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDE 329

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           G+  EA++L D M    ++PD +  +TL D   +  GS
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGS 367



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 93/187 (49%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K+   D ALKL+ ++ + G+   IITYNTII G C   + D+AV    +L    L P+ 
Sbjct: 502 FKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I+I  +C EG ++ A    +KM+E   K ++ T + L+ G  +   ++    ++  
Sbjct: 562 STSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNT 621

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
                   + V+Y+I+I   CK   +E+A          +L PD  TY  ++ G  KAGR
Sbjct: 622 WISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGR 681

Query: 183 PTEAMQL 189
             EA +L
Sbjct: 682 TEEAEKL 688



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+  L LF     +G   D +TYN II  +C   RL++A  L  ++    L+P+
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPD 665

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV-----------VTYSCLIDGYFKS 110
             T+  ++    K GR ++A  +  K  EKG +              + YS  I      
Sbjct: 666 RYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQ 725

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
              K A  ++++  +  +S N  +Y  L+DGL KR
Sbjct: 726 GKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKR 760


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 1/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A++L   +  RG +PD+ T+N  +  YC+L +++E + L +++    LKP+ +
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID +CK   M  A    +++++ G + N V Y+ LI GY ++ N+  A  + + M
Sbjct: 564 TYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I P  V+Y+ L+  +C  GL+EE    F   +   +   V+ Y I+I+G+CK G+ 
Sbjct: 624 KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKI 683

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            EA+  +  M   GI P+ +  +TL  +    SG++E 
Sbjct: 684 DEAVMYFKEMHSRGIPPNKMTYTTLM-FAYSKSGNKEE 720



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 1/212 (0%)

Query: 7   HLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            LD A K+FG++ D + + PD+ TY  +I   C    +D A  +  +L    ++P  +T+
Sbjct: 190 QLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTY 249

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +L+DA CK GR+++A  +  +M+E   + ++VT+  LI G  + Q       V +EM  
Sbjct: 250 NVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQG 309

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I+PN V Y+ +I   C++G   EAL  F   +   +   VVTY ++ +  CK G    
Sbjct: 310 FGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 369

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A ++ D ML  G+M    L +++  ++L+ +G
Sbjct: 370 AEKILDEMLLAGMMVHCSLFNSVVAWHLRGTG 401



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 36/243 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTI---ICG---------------------YCS 39
           ++ H   ALKLF ++  +G++  ++TYN I   +C                      +CS
Sbjct: 328 RKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCS 387

Query: 40  L------------NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           L             RLD  ++L  ++    LKPN    T  I   CK G+ ++A  ++ +
Sbjct: 388 LFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQ 447

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           +L KG   NV T + LI G  +  NMK A  V + M  + +  + ++Y+I+I G CK   
Sbjct: 448 VLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK 507

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M+EA+      +     PD+ T+ I +  YC  G+  E + L D M   G+ PD +   T
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 208 LAD 210
           + D
Sbjct: 568 IID 570



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A +++ Q+  +GL  ++ T N +I G C  N + EA ++ + +    ++ +
Sbjct: 432 LCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELD 491

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ I+I   CK  +MD+A  +   M+++G K ++ T++  +  Y     ++    + +
Sbjct: 492 RITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLD 551

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P+IV+Y  +IDG CK   M +A       + N L P+ V Y  LI GY + G
Sbjct: 552 QMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNG 611

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A+ + D+M  NGI P  +  ++L
Sbjct: 612 NISDAIGILDTMKYNGIQPTPVTYNSL 638



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 75/134 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +   +   G++P  +TYN+++   C    ++E   +F +     ++   I +TI+I 
Sbjct: 616 AIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQ 675

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G++D+A M F +M  +G   N +TY+ L+  Y KS N + A  +++EM    I P
Sbjct: 676 GFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVP 735

Query: 131 NIVSYSILIDGLCK 144
           + VSY+ LI G C+
Sbjct: 736 DSVSYNTLISGFCE 749



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 35/203 (17%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L L  Q+   GL+PDI+TY TII GYC    + +A +   +L    L+PN++ +  LI  
Sbjct: 547 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGG 606

Query: 72  FCKEGRMDDA-----TM------------------------------MFSKMLEKGPKAN 96
           + + G + DA     TM                              +F++ + K  +  
Sbjct: 607 YGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELG 666

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           V+ Y+ +I G+ K   +  A   ++EM    I PN ++Y+ L+    K G  EEA   F 
Sbjct: 667 VIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFD 726

Query: 157 CALDNHLLPDVVTYAILIRGYCK 179
             +   ++PD V+Y  LI G+C+
Sbjct: 727 EMVSLGIVPDSVSYNTLISGFCE 749



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 19/216 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +DAA  +  +L   G++P ++TYN ++   C   R++EA +L  ++   +++P+
Sbjct: 221 LCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPS 280

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILI    +  +  +   +  +M   G   N V Y+ +I  + +  +   A  +++
Sbjct: 281 IVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFD 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA-------LYA---FHCALDNHLLPDVVTYA 171
           EM    I   +V+Y+++   LCK G ME A       L A    HC+L N ++      A
Sbjct: 341 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV------A 394

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
             +RG    GR    ++L   ML   + P+  L++ 
Sbjct: 395 WHLRG---TGRLDLVLRLIREMLARFLKPNDALMTA 427



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 5/181 (2%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYS 101
           L  A   F +L+     P+  T +IL++A    G++D A  +F +M + K    +V TY+
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYT 215

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I    ++  + +AF +  E+  + I P +V+Y++L+D LCK G +EEA       ++ 
Sbjct: 216 AMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEG 275

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            + P +VT+ ILI G  +  +  E   +   M   GI P+ ++ + +  ++ +      H
Sbjct: 276 RVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKG----H 331

Query: 222 C 222
           C
Sbjct: 332 C 332



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 3/150 (2%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   ++    +F Q   + +E  +I Y  II G+C + ++DEAV  F+++    + PN 
Sbjct: 643 CHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNK 702

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T L+ A+ K G  ++A+ +F +M+  G   + V+Y+ LI G+ +  ++    +   E
Sbjct: 703 MTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAE 762

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           M    +  +  SY+  +DG+      +EA+
Sbjct: 763 MSSQVLKQDGCSYNAFVDGITTPWCQKEAV 792



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTY 170
           ++  A D + E+     SP+I + SIL++ L   G ++ A   F    D   + PDV TY
Sbjct: 155 SLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTY 214

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +I+  C+AG    A  +   + R+GI P  +  + L D   +S   +E
Sbjct: 215 TAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEE 264



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + A KLF ++   G+ PD ++YNT+I G+C ++ LD+ V+   +++   LK +  
Sbjct: 714 KSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGC 773

Query: 64  TFTILIDA----FCKEGRMDDA 81
           ++   +D     +C++  + +A
Sbjct: 774 SYNAFVDGITTPWCQKEAVSNA 795


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 117/200 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++  + + P ++T++++I G+C + +  +A +LF ++    + P++ TF IL+D
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKEG++ +A  + + M+++G +  VVTY+ L+DGY     +  A  V   +    ++P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  SY+I+I+G CK  +++EAL  FH      + P  VTY  LI G CKAGR   A +L 
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M  N I  D +  ++L D
Sbjct: 392 DEMHNNCIPADIVTYNSLID 411



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 107/186 (57%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P+  +YN +I G+C +  +DEA+ LF ++ C  + P+ +T+  LID  CK GR+  A 
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  +M      A++VTY+ LID + K+Q++  A  + +++ E+ I PN+ +Y+ILIDGL
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK G ++ A   F   L      +  TY I+I G CK G   EA  L   M  NGI+PD 
Sbjct: 449 CKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDA 508

Query: 203 LLLSTL 208
           +   T+
Sbjct: 509 VTYETI 514



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 108/192 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++  RG+ P  +TYN++I G C   R+  A +L +++    +  + +T+  
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNS 408

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCK   +D A  +  K+ E G + N+ TY+ LIDG  K   +K+A DV++++    
Sbjct: 409 LIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + N  +Y+I+I+GLCK GL +EA        DN ++PD VTY  +I+         +A 
Sbjct: 469 YNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQ 528

Query: 188 QLYDSMLRNGIM 199
           +L   M+  G++
Sbjct: 529 KLLREMVIKGVV 540



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 21/225 (9%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT----CVQLKPNS 62
           H    L L  Q+  +G++PD+ T + +I  YC L ++  A  +F K+     C+  K N 
Sbjct: 82  HYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNE 141

Query: 63  -----------------ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
                            +T+ ILI+  CK G+   A  +  ++  K    NVV YS +ID
Sbjct: 142 ALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIID 201

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           G  K + +  A+ +Y EM    I P +V++S LI G C  G  ++A   F+  +  ++ P
Sbjct: 202 GLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINP 261

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D  T+ IL+   CK G+  EA  +   M++ G+ P  +  +TL D
Sbjct: 262 DAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMD 306



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 105/201 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL++  Q+  + +  +++ Y+TII G C    + +A  L+ ++   ++ P  +TF+ LI
Sbjct: 176 AALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLI 235

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FC  G+  DA  +F++M+ K    +  T++ L+D   K   +K A +V   M +  + 
Sbjct: 236 YGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVE 295

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V+Y+ L+DG C    + +A +         + P+  +Y I+I G+CK     EA+ L
Sbjct: 296 PTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCL 355

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M   GI P  +  ++L D
Sbjct: 356 FHEMCCRGIAPHKVTYNSLID 376



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL     +   G   + +TY  +I G C + +   A+Q+  ++    +  N + ++ 
Sbjct: 139 VNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYST 198

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+  + DA  ++S+M+ K     VVT+S LI G+      K AF ++ EM   N
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P+  +++IL+D LCK G ++EA       +   + P VVTY  L+ GYC      +A 
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318

Query: 188 QLYDSMLRNGIMPD 201
            +   + R  + P+
Sbjct: 319 HVLSIISRMRVAPN 332



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 22/225 (9%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYC-SLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A+  F ++      P I+ +N I+     + N     + L  ++    +KP+  T +
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP---------------------KANVVTYSCLID 105
           ILI+ +C  G+M  A  +F+K+L+ G                        N VTY  LI+
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILIN 166

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           G  K    ++A  V  ++    ++ N+V YS +IDGLCK  L+ +A   +   +   + P
Sbjct: 167 GLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP 226

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            VVT++ LI G+C  G+  +A +L++ M+   I PD    + L D
Sbjct: 227 TVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 4/174 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L  ++ +  +  DI+TYN++I  +C    +D+A+ L +K+    ++PN
Sbjct: 378 LCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPN 437

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILID  CK G++ +A  +F  +L KG   N  TY+ +I+G  K      A  +  
Sbjct: 438 MCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLS 497

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           +M +N I P+ V+Y  +I  L  +   E+A       L   ++  VV YA  IR
Sbjct: 498 KMEDNGIIPDAVTYETIIQALFHKDENEKA----QKLLREMVIKGVVVYAFEIR 547


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 111/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF ++ +RG+E +++TYNT+I G C   R+ EA +L +++    + PN IT+  LI 
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIG 345

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC  G +D A+ +  ++   G   ++VTY+ LI+GY K+ N K   D+  EM    ISP
Sbjct: 346 GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISP 405

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+ ++LID   +   ME+A   +       L+PDV  Y +LI G C  G   E+ +L+
Sbjct: 406 SKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLF 465

Query: 191 DSMLRNGIMPDGLLLSTL 208
            SM    + P  ++ +T+
Sbjct: 466 RSMGEMHVEPSDVIYNTM 483



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +  A KL  Q+    + P++ITYNT+I G+C +  LD+A  L ++L    L P+ +
Sbjct: 314 REERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLV 373

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+ + K G       +  +M  +G   + VT + LID Y + Q M+ AF +Y  M
Sbjct: 374 TYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM 433

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++  Y +LI GLC +G M+E+   F    + H+ P  V Y  +I GYCK    
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNS 493

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A++L   M   G++P+
Sbjct: 494 YRALRLLREMEAKGLVPN 511



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 119/249 (47%), Gaps = 39/249 (15%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C    +LD + +L G L D GL P+++ Y T+I G C    ++ A   F+K+  +
Sbjct: 167 IMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEM 226

Query: 57  QLKPNSITFTILIDA-----------------------------------FCKEGRMDDA 81
            L  N  TFT+LI+                                    +C EG++  A
Sbjct: 227 GLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRA 286

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M E+G +ANVVTY+ LI G  + + +  A  + ++M +  +SPN+++Y+ LI G
Sbjct: 287 FDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGG 346

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C  G +++A         N L P +VTY ILI GY KAG       L   M   GI P 
Sbjct: 347 FCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPS 406

Query: 202 GLLLSTLAD 210
            +  + L D
Sbjct: 407 KVTCTVLID 415



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++    + A   F +L +R ++ D+ ++  +I G C    LD++ QL   L  + L PN
Sbjct: 138 LVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPN 196

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LID  CK G ++ A + F KM E G  AN  T++ LI+G FK    K  FD++E
Sbjct: 197 VVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFE 256

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  N + PN+ +Y+ L++  C  G +  A   F    +  +  +VVTY  LI G C+  
Sbjct: 257 KMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREE 316

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA +L D M +  + P+ +  +TL
Sbjct: 317 RVWEAEKLVDQMKKAAVSPNLITYNTL 343



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  L  QL   GL P ++TYN +I GY           L  ++    + P+ +T T
Sbjct: 352 NLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCT 411

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LIDA+ +   M+ A  ++S M + G   +V  Y  LI G     NMK +  ++  M E 
Sbjct: 412 VLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEM 471

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++ P+ V Y+ +I G CK      AL          L+P+V +Y+ +I   CK G+  EA
Sbjct: 472 HVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA 531

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
             L D M+   + P   +L+ ++
Sbjct: 532 EVLLDKMIELQLKPSASILNMIS 554



 Score = 40.8 bits (94), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +   AL+L  ++  +GL P++ +Y++II   C   + +EA  L +K+  +QLKP++ 
Sbjct: 489 KEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSAS 548

Query: 64  TFTILIDA 71
              ++  A
Sbjct: 549 ILNMISKA 556


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 109/200 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +F ++ D G EPD+ITYN++I  +C   R+ +A +    +    L+PN +T++ 
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAFCK G + +A   F  M+  G + N  TY+ LID   K  ++  AF +  EM +  
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++ NIV+Y+ L+DGLC+ G M EA   F   L      +   Y  L  GY KA    +AM
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481

Query: 188 QLYDSMLRNGIMPDGLLLST 207
            + + M +  + PD LL  T
Sbjct: 482 DILEEMNKKNLKPDLLLYGT 501



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 110/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   ++ A+ +  ++  + L+PD++ Y T I G C  N +++++ +  ++    L  NS
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS 531

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +T LIDA+ K G+  +A  +  +M + G K  VVTY  LIDG  K   ++ A   ++ 
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDH 591

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N + PNI+ Y+ LIDGLCK   +EEA   F+  LD  + PD + Y  LI G  K G 
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651

Query: 183 PTEAMQLYDSMLRNGIMPD 201
           P EA+ L + M+  G+  D
Sbjct: 652 PGEALSLRNRMVEIGMELD 670



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 117/219 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  A +LFG L   G   +   Y ++  GY     +++A+ + E++    LKP+
Sbjct: 436 LCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPD 495

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +   I   C++  ++D+  +  +M++ G  AN   Y+ LID YFK      A ++ +
Sbjct: 496 LLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQ 555

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I   +V+Y +LIDGLCK GL+++A+  F     N L P+++ Y  LI G CK  
Sbjct: 556 EMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKND 615

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              EA  L++ ML  GI PD L+ ++L D N++     E
Sbjct: 616 CLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGE 654



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 35/235 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K F  +   GL+P+  TY ++I   C +  L+EA +L  ++    +  N +T+T L+D
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++GRM +A  +F  +L+ G   N   Y+ L  GY K++ M+ A D+ EEM + N+ P
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD------------------------ 166
           +++ Y   I GLC++  +E+++      +D  L  +                        
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554

Query: 167 -----------VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                      VVTY +LI G CK G   +A++ +D M RNG+ P+ ++ + L D
Sbjct: 555 QEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID 609



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 99/188 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F  +   GL P + TYN +I        L+ A  LFE++    L+P+ +T+  LID
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G +  A  +F +M + G + +V+TY+ LI+ + K + +  AF+    M +  + P
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS LID  CK G++ EA   F   +   L P+  TY  LI   CK G   EA +L 
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 191 DSMLRNGI 198
             M + G+
Sbjct: 415 SEMQQAGV 422



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A + F ++    + P + + N ++      ++   A+  F+ +    L P+  T+ +
Sbjct: 197 LEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNM 256

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I    +EG ++ A  +F +M  KG + ++VTY+ LIDGY K   +  A  V+EEM +  
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y+ LI+  CK   + +A    H      L P+VVTY+ LI  +CKAG   EA 
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYN 212
           + +  M+R G+ P+    ++L D N
Sbjct: 377 KFFVDMIRVGLQPNEFTYTSLIDAN 401



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 110/203 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  ++ ++ +  ++ D GL  +   Y T+I  Y  + +  EAV L +++  + +K  
Sbjct: 506 LCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKIT 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LID  CK G +  A   F  M   G + N++ Y+ LIDG  K+  ++ A +++ 
Sbjct: 566 VVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ISP+ + Y+ LIDG  K G   EAL   +  ++  +  D+  Y  LI G+ + G
Sbjct: 626 EMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYG 685

Query: 182 RPTEAMQLYDSMLRNGIMPDGLL 204
           +   A  L D MLR GI+PD +L
Sbjct: 686 QVQLAKSLLDEMLRKGIIPDQVL 708



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 103/189 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ D G++  ++TY  +I G C +  + +AV+ F+ +T   L+PN + +T LID
Sbjct: 550 AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID 609

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +++A  +F++ML+KG   + + Y+ LIDG  K  N   A  +   M E  +  
Sbjct: 610 GLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMEL 669

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ LI G  + G ++ A       L   ++PD V    L+R Y + G   EA+ L+
Sbjct: 670 DLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALH 729

Query: 191 DSMLRNGIM 199
           D M R G++
Sbjct: 730 DDMARRGLI 738



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 91/187 (48%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P    ++T+      L  L+EA Q F K+   ++ P   +   L+    K  +   A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
            F  M+  G   +V TY+ +I    +  ++++A  ++EEM    + P+IV+Y+ LIDG  
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G++  A+  F    D    PDV+TY  LI  +CK  R  +A +    M + G+ P+ +
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 204 LLSTLAD 210
             STL D
Sbjct: 358 TYSTLID 364



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 65/130 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF ++ D+G+ PD + Y ++I G        EA+ L  ++  + ++ +   +T 
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTS 676

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F + G++  A  +  +ML KG   + V   CL+  Y++  ++  A  ++++M    
Sbjct: 677 LIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736

Query: 128 ISPNIVSYSI 137
           +    +  ++
Sbjct: 737 LISGTIDITV 746


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 119/220 (54%), Gaps = 6/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L  A  +F Q+ D G+ P++ TYN ++ GYC    + +A+ L++ +    L+PN
Sbjct: 231 LCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPN 290

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILIDA CK   +  A   F +M + G   NVV ++ LIDGY K+ N   A D+  
Sbjct: 291 VVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLL 350

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ISP++ +YSILI   C+ G +EEA           +  + V Y  LI GYCK G
Sbjct: 351 EMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEG 410

Query: 182 RPTEAMQLYDS------MLRNGIMPDGLLLSTLADYNLQS 215
              +A++++ +      M RNG+ PD L  + +   +L +
Sbjct: 411 NMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNA 450



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 109/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   D   +L+  +  R L P ++TYN ++   C    +  A  L  ++    ++P 
Sbjct: 161 LLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPT 220

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C E ++ +A  MF +M + G   N+ TY+ L+DGY K+ N+K A  +Y+
Sbjct: 221 VVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQ 280

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++ + PN+V++ ILID LCK   +  A   F       ++P+VV +  LI GY KAG
Sbjct: 281 GMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAG 340

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +EA  L   M +  I PD    S L
Sbjct: 341 NCSEATDLLLEMEKFKISPDVFTYSIL 367



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 115/203 (56%), Gaps = 3/203 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+++ ++   G  P +   N ++ G    +  D   +L+  +   +L P  +T+ +
Sbjct: 135 VDEALRVYLKV---GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNV 191

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA C++G +  A  + S+M++KG +  VV Y+ LI G      +  A  ++ +M ++ 
Sbjct: 192 LVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSG 251

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +Y++L+DG CK   +++AL+ +   LD+ L P+VVT+ ILI   CK      A 
Sbjct: 252 VFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAAR 311

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           + +  M + G++P+ ++ ++L D
Sbjct: 312 RFFVQMAKFGVVPNVVVFNSLID 334



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 38/225 (16%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILIDAFCKEGR 77
           T R L  D+I     +   C+  R++  V  F  L+ ++  K N   F +LI AF + G 
Sbjct: 80  TARCLTKDLIQ---TLLQSCTPRRVNSLV--FNALSQLRGSKFNPSVFGVLIIAFSEVGL 134

Query: 78  MDDATMMFSK--------------------------------MLEKGPKANVVTYSCLID 105
           +D+A  ++ K                                M+ +     VVTY+ L+D
Sbjct: 135 VDEALRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVD 194

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
              +  ++  A  +  EM +  I P +V Y+ LI GLC    + EA   F    D+ + P
Sbjct: 195 ACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFP 254

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ TY +L+ GYCK     +A+ LY  ML +G+ P+ +    L D
Sbjct: 255 NLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILID 299



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 6/125 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ------LKPN 61
           ++ A  +  ++   G+  + + YN++I GYC    +++A+++F+            L+P+
Sbjct: 377 VEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPD 436

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +++        M D  M+ + M++ G   N VT   +  GY  +  +KSA     
Sbjct: 437 ALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSALWCSR 496

Query: 122 EMCEN 126
           ++ E+
Sbjct: 497 DLTES 501


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 1/199 (0%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD  +Y  +I GYC   R DEA ++F+ +  + L P  +T+  L+  +C   R+DDA
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +ML KG    VVTY+ ++ G F+++    A ++Y  M  +    +I +Y+I+++G
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK   ++EA   F       L  +++T+ I+I    K GR  +AM L+ ++  NG++P+
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688

Query: 202 GLLLSTLADYNLQSSGSQE 220
            +    +A+ NL   GS E
Sbjct: 689 VVTYRLVAE-NLIEEGSLE 706



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 35/236 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  +F Q+ D G +P+  TYN +I GY S+ +  E VQ+ E+++   LKP+  T+  
Sbjct: 250 FDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGS 309

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY-------------------- 107
           L++  CK GR  +A   F  M+ KG K  V TY  LI GY                    
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 108 ----------FKSQNMK-----SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                     F S   K      A D++ +M ++ +SPN+V+Y  LID LCK G +++A 
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             F+  ++  + P++V +  L+ G C   +   A +L   ML  GI P+ +  +TL
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTD---RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           L  E   + AL+L   + D   R   P++++Y+ +I G+ +  ++D+   LF ++    +
Sbjct: 171 LCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGI 230

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            P+ +T+T +ID  CK    D A  +F +M++ G K N  TY+CLI GY      K    
Sbjct: 231 PPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQ 290

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + EEM    + P+  +Y  L++ LCK G   EA + F   +   + P V TY ILI GY 
Sbjct: 291 MLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYA 350

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
             G  +E     D M+ NG+ PD
Sbjct: 351 TKGALSEMHSFLDLMVENGLSPD 373



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 111/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A K+F  +   GL P  +TYNT++ GYCS +R+D+A  LF ++    + P  +T+  +
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 590

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +    +  R  +A  ++  M+  G K ++ TY+ +++G  KS  +  AF +++ +C   +
Sbjct: 591 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 650

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             NI++++I+I  L K G  E+A+  F     N L+P+VVTY ++     + G   E   
Sbjct: 651 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDS 710

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+ +M +NG  P+  +L+ L
Sbjct: 711 LFSAMEKNGTAPNSQMLNAL 730



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITF 65
           HL+     FG +   G   D I  N ++ G C   R+ EA+  L +++  +   P+++++
Sbjct: 105 HLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSY 164

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPK---ANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           TIL+   C E R ++A  +   M +   +    NVV+YS +I+G+F    +   ++++ E
Sbjct: 165 TILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLE 224

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  I P++V+Y+ +IDGLCK  L + A   F   +DN   P+  TY  LI GY   G+
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             E +Q+ + M   G+ PD     +L +Y
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNY 313



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 97/201 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F ++   GL P+++ Y  +I   C L R+D+A   F ++    + PN + F  
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C   + + A  +  +ML++G   N V ++ LI        +     + + M    
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 509

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  SY+ LI G C  G  +EA   F   +   L P  VTY  L+ GYC A R  +A 
Sbjct: 510 VRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  MLR G+ P  +  +T+
Sbjct: 570 CLFREMLRKGVTPGVVTYNTI 590



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
            F  +  +G++P + TY  +I GY +   L E     + +    L P+   F I   A+ 
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D A  +F+KM + G   NVV Y  LID   K   +  A   + +M    ++PNIV
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ L+ GLC     E A    +  LD  + P+ V +  LI   C  GR  E  +L D M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505

Query: 194 LRNGIMPDGLLLSTL 208
              G+ PD    + L
Sbjct: 506 EHVGVRPDAFSYTPL 520



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 12/214 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL----FEKLT---CVQLKP 60
           LD ALKLF +L        +  +N ++    S  R   A +L    F ++      ++ P
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTA-VSRARCSSASELAVSHFNRMVRECSDKVAP 88

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV- 119
           N  T++ILI  FC+ G ++     F  +L+ G + + +  + L+ G    + +  A DV 
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRG 176
            + M E    P+ VSY+IL+ GLC     EEAL   H   D+H     P+VV+Y+I+I G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   G+  +   L+  M+  GI PD +  +T+ D
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVID 242



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 89/179 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  LF ++  +G+ P ++TYNTI+ G     R  EA +L+  +     K +  T+ I
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK   +D+A  MF  +  KG + N++T++ +I    K    + A D++  +  N 
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + PN+V+Y ++ + L + G +EE    F     N   P+      L+R     G  + A
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 64/132 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  L  +GL+ +IIT+  +I       R ++A+ LF  +    L PN +T+ +
Sbjct: 635 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 694

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   +FS M + G   N    + L+       ++  A     ++ E N
Sbjct: 695 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 754

Query: 128 ISPNIVSYSILI 139
            S    + S+L+
Sbjct: 755 FSVEASTTSLLM 766


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 106/199 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAAL++F ++ +RG  P   TY T+I G C L ++ EA +LF+++      P  +T+  
Sbjct: 172 MDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXS 231

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+   +D A  +  +M  KG K NV TYS L+DG+ KS     A ++ + M    
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+++YS L+ GLCK G ++EA+          L PD   Y  +I G+C   +  EA 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351

Query: 188 QLYDSMLRNGIMPDGLLLS 206
              D M+  GI P+ L  S
Sbjct: 352 NFLDEMVLGGISPNRLTWS 370



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++ +   EP   +Y T+       N+L  A++ +  +  + + P+  +  +LI 
Sbjct: 104 AVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIK 163

Query: 71  AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           A CK  G MD A  +F +M  +G   +  TY  LI G  +   +  A ++++EM     S
Sbjct: 164 ALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACS 223

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V+Y  LI GLC+   ++ A+          + P+V TY+ L+ G+CK+G  + A++L
Sbjct: 224 PTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALEL 283

Query: 190 YDSMLRNGIMPDGLLLSTL 208
            D M+    +P+ +  STL
Sbjct: 284 LDMMVSRRHLPNMITYSTL 302



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 14/204 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A++L  ++  +G++P++ TY++++ G+C       A++L + +   +  PN IT++ 
Sbjct: 242 LDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYST 301

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CKEG++ +A  +  +M  +G + +   Y  +I G+        A +  +EM    
Sbjct: 302 LVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGG 361

Query: 128 ISPNIVSYS-------ILIDGLCKRGLMEEALYAFHCALD---NHLLPDVVTYAILIRGY 177
           ISPN +++S       I++ GLC     E    AF   L      +  D  T+  L+  +
Sbjct: 362 ISPNRLTWSLHVRIHNIVVQGLC----TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYF 417

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           C  G   +A  L D M+ +G +PD
Sbjct: 418 CNKGDLHKAAHLVDEMVLDGCIPD 441



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 1/190 (0%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +I   Y  +++  +AV++F K+   + +P+  ++  +      E ++  A   +  M E 
Sbjct: 90  SICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREM 149

Query: 92  GPKANVVTYSCLIDGYFK-SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           G   +V + + LI    K S  M +A  ++ EM      P+  +Y  LI GLC+ G + E
Sbjct: 150 GIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGE 209

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A   F         P VVTY  LI G C++     A++L + M   GI P+    S+L D
Sbjct: 210 AKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMD 269

Query: 211 YNLQSSGSQE 220
            + +S  S  
Sbjct: 270 GHCKSGCSSR 279



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 1/173 (0%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T++ +I    S N    A +L  ++   +       F  +  A+ +  +  DA  +F KM
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR-GL 147
            E   + +  +Y  +         +K A   Y  M E  I P++ S ++LI  LCK  G 
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           M+ AL  F    +    P   TY  LI G C+ G+  EA +L+  M      P
Sbjct: 172 MDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSP 224



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A+++  ++  +GL PD   Y  II G+C + +  EA    +++    + PN
Sbjct: 306 LCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPN 365

Query: 62  SITFT-------ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
            +T++       I++   C E   + A  ++  M  +G   +  T+  L++ +    ++ 
Sbjct: 366 RLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLH 424

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            A  + +EM  +   P+  +++ ++     R  + E+
Sbjct: 425 KAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRES 461


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 113/211 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+ L  ++  +G  PDI +YNTII   C+  +++EA  +FE L    +  N
Sbjct: 410 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 469

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +I A  ++GR  DA  +  +M+  G   +VV+Y+ LI    K  N+  +  + E
Sbjct: 470 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 529

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I PN VSY+ILI  LCK   + +AL      L+  L PD+VTY  LI G CK G
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 589

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
               A+ L + +    + PD +  + L  ++
Sbjct: 590 WMHAALNLLEKLHNENVHPDIITYNILISWH 620



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 5/219 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  L  A +L+  +  +G +PD  TY+ ++ G C L R+  AV+L  ++      PN 
Sbjct: 306 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNV 365

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+TI++ +FCK G  DD   +  +M  KG   N   Y+ +I    K   M  A  + +E
Sbjct: 366 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 425

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     +P+I SY+ +I  LC    MEEA + F   L+  ++ + +TY  +I    + GR
Sbjct: 426 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 485

Query: 183 PTEAMQLYDSMLRNGIMPD-----GLLLSTLADYNLQSS 216
             +A++L   M+ +G   D     GL+ +   D N+  S
Sbjct: 486 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 524



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 104/200 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D    L  +++ +GL  +   YN +I   C   R+DEA+ L +++      P+  ++  +
Sbjct: 382 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 441

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C   +M++A  MF  +LE+G  AN +TY+ +I    +    + A  + +EM  +  
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           S ++VSY+ LI  +CK G ++ +L       +  + P+ V+Y ILI   CK  R  +A++
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 561

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L   ML  G+ PD +  +TL
Sbjct: 562 LSKQMLNQGLAPDIVTYNTL 581



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 4/200 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  + G++     E +++ +NT+I G  +  +L EA +L+E +     +P++ T++IL
Sbjct: 281 DEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   CK GR+  A  +  +M +KG   NVVTY+ ++  + K+        + EEM    +
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           + N   Y+ +I  LCK G M+EA+            PD+ +Y  +I   C   +  EA  
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +++++L  G++ +G+  +T+
Sbjct: 457 MFENLLEEGVVANGITYNTI 476



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 90/150 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++     A++L  ++   G   D+++YN +I   C    +D ++ L E++    +KPN
Sbjct: 480 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 539

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++ ILI   CKE R+ DA  +  +ML +G   ++VTY+ LI+G  K   M +A ++ E
Sbjct: 540 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 599

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           ++   N+ P+I++Y+ILI   CK  L+++A
Sbjct: 600 KLHNENVHPDIITYNILISWHCKVRLLDDA 629



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 39/225 (17%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTII---C------------------------------ 35
           D AL L   +   G  PD + Y T+I   C                              
Sbjct: 176 DEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 235

Query: 36  --GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
             G C L R+ EA +L +++      P  +T+  L+   C+  + D+A  M  ++    P
Sbjct: 236 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV----P 291

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
           + NVV ++ +I G      +  A ++YE M      P+  +YSIL+ GLCK G +  A+ 
Sbjct: 292 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 351

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                      P+VVTY I++  +CK G   +   L + M   G+
Sbjct: 352 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 31/208 (14%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P   T+       C L R DEA+ L   +      P+++ +  +I A C +G + +A  +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            ++ML  G  A+V T+  ++ G      ++ A  + + M      P +++Y  L+ GLC+
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 145 -------------------------------RGLMEEALYAFHCALDNHLLPDVVTYAIL 173
                                           G + EA   +         PD  TY+IL
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + G CK GR   A++L   M + G  P+
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPN 364



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 31/183 (16%)

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           ++ P + TF +   A C+ GR D+A  +   M   G   + V Y  +I        +  A
Sbjct: 154 RVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 213

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             +  EM     + ++ ++  ++ G+C  G + EA       +    +P V+TY  L++G
Sbjct: 214 ATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQG 273

Query: 177 YCKA-------------------------------GRPTEAMQLYDSMLRNGIMPDGLLL 205
            C+                                G+  EA +LY++M   G  PD    
Sbjct: 274 LCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTY 333

Query: 206 STL 208
           S L
Sbjct: 334 SIL 336



 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 117 FDVYEEMCENN-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           F +Y  M   + + P   ++ +    LC+ G  +EAL        +  +PD V Y  +I 
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 202

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD 201
             C  G  TEA  L + ML  G   D
Sbjct: 203 ALCDQGGVTEAATLLNEMLLMGCAAD 228


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +   ++  + + P + TY +II G   ++RLDEA  LFE+     ++ N I
Sbjct: 106 KSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 165

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  +M++KG   NV T++ L+D   K++ +  A   ++ M
Sbjct: 166 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSM 225

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   SPN  +YSILI+GLC+     +A   +       L+P+VVTY  +I G  K G  
Sbjct: 226 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNI 285

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T+A  L++    NG +PD    + L
Sbjct: 286 TDACSLFERFKANGGIPDAASFNAL 310



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 106/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  RG   D   YN ++ G+C   ++D+A +  E++    + P   T+  +ID   
Sbjct: 81  IFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLA 140

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  R+D+A M+F +   KG + NV+ YS LIDG+ K   +  A+ + EEM +  ++PN+ 
Sbjct: 141 KIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVY 200

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ L+D L K   + EAL  F    +    P+  TY+ILI G C+  +  +A   +  M
Sbjct: 201 TWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 260

Query: 194 LRNGIMPDGLLLSTL 208
            + G++P+ +  +T+
Sbjct: 261 QKQGLVPNVVTYTTM 275



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 102/196 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF +   +G+E ++I Y+++I G+  + R+DEA  + E++    L PN
Sbjct: 139 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPN 198

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+DA  K   +++A + F  M E     N  TYS LI+G  + Q    AF  ++
Sbjct: 199 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 258

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  + PN+V+Y+ +I GL K G + +A   F     N  +PD  ++  LI G   A 
Sbjct: 259 EMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHAN 318

Query: 182 RPTEAMQLYDSMLRNG 197
           R  EA  +++     G
Sbjct: 319 RAIEAYHVFEETRLRG 334



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 103/198 (52%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F ++  RG +PD+   NT +        +++   +FE +      P+  +++ILI   
Sbjct: 10  KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 69

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G+  + + +F  M ++G   +   Y+ ++DG+ KS  +  A++  EEM   ++ P +
Sbjct: 70  TKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTV 129

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  +IDGL K   ++EA   F  A    +  +V+ Y+ LI G+ K GR  EA  + + 
Sbjct: 130 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 189

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M++ G+ P+    ++L D
Sbjct: 190 MMKKGLAPNVYTWNSLMD 207



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           R ++  ++F+++     +P+       +D   K G ++    +F  +   G   +V +YS
Sbjct: 4   RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 63

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            LI G  K+   +    ++  M +   + +  +Y+ ++DG CK G +++A  A       
Sbjct: 64  ILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVK 123

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           H+ P V TY  +I G  K  R  EA  L++     GI  + ++ S+L D
Sbjct: 124 HVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLID 172



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 73/150 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ AL  F  + +    P+  TY+ +I G C + + ++A   ++++    L PN
Sbjct: 209 LVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 268

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +I    K G + DA  +F +    G   +  +++ LI+G   +     A+ V+E
Sbjct: 269 VVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFE 328

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E        N+ +   L+D L K   +E+A
Sbjct: 329 ETRLRGCRINVKACISLLDALNKAECIEQA 358



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 61/125 (48%)

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           GR +D   +F +M  +G + ++   +  +D  FK+ +++    ++E++      P++ SY
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           SILI GL K G   E    FH         D   Y  ++ G+CK+G+  +A +  + M  
Sbjct: 63  SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122

Query: 196 NGIMP 200
             + P
Sbjct: 123 KHVPP 127


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 137 KDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 196

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE + DDA  +F +ML KG   N V ++ LIDG+ K+  +  A ++Y++M
Sbjct: 197 TYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQM 256

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 257 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDL 316

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++     D +  + L
Sbjct: 317 DSAFEHXKRMIQENXRLDEVXYTAL 341



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 107/195 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  ++ D+A +LF+++    L PN + FT 
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 235

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 295

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  +   D V Y  LI G C  GR  +A 
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAE 355

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 356 KMLREMLSVGLKPDA 370



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 114/214 (53%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE   D A +LF ++  +GL P+ + + T+I G+C   R+D A+++++++    L P+ I
Sbjct: 207 KESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLI 266

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ SAF+  + M
Sbjct: 267 TYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRM 326

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + N   + V Y+ LI GLC  G   +A       L   L PD  TY ++I  +CK G  
Sbjct: 327 IQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 386

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +  +L   M R+G +P      ++  YN+  +G
Sbjct: 387 WKGSKLLKEMQRDGHVP------SVVTYNVLMNG 414



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 100 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPS 159

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K      A ++++
Sbjct: 160 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFD 219

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V ++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 220 EMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 279

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 280 DLKQAHHLIDEMSXKGLKPDKITYTTLID 308



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 77/140 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    LD A +  +++     + +
Sbjct: 275 LCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLD 334

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++     + +
Sbjct: 335 EVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 394

Query: 122 EMCENNISPNIVSYSILIDG 141
           EM  +   P++V+Y++L++G
Sbjct: 395 EMQRDGHVPSVVTYNVLMNG 414



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 57  VFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 116

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 117 LECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 176

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L  +ML +G+ PD    S L
Sbjct: 177 DEGFRLKSAMLASGVQPDVYTYSVL 201


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 112/206 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L   +  +G E D+ TYN +  G C L+R +EA ++   +    + PN +
Sbjct: 369 KRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVV 428

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T    I+ +C+EG + +       + ++G   N+VTY+ LID Y K++ +K A  +  EM
Sbjct: 429 TCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEM 488

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P++ +Y+ LI G C    ++EAL  F+  L   +  +V TY  +I G  K GR 
Sbjct: 489 VEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRA 548

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA++LYD M+R G++PD  +   L 
Sbjct: 549 DEALKLYDEMMRMGLIPDDRVFEALV 574



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 1/216 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A K++ ++ +R +E D+  Y ++I   C    +  A  LF+++ C  + PN+ TF 
Sbjct: 267 RIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFG 326

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   CK G+M+ A ++  +M  KG   NVV ++ ++DGY K   M  AF + + M   
Sbjct: 327 ALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERK 386

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               ++ +Y+IL  GLCK    EEA    +  ++  + P+VVT A  I  YC+ G   E 
Sbjct: 387 GFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEP 446

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
            +   ++ + G++P+ +  +TL D Y+      Q H
Sbjct: 447 ERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAH 482



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 106/208 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++ G +   G+   ++TY  +I  Y S  R+ EA +++E++    ++ +   +T +I   
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C+ G +  A+ +F +M+ +G   N  T+  LI G  K+  M++A  + EEM    +  N+
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V ++ ++DG CKRG+M+EA              DV TY IL  G CK  R  EA ++ + 
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNV 417

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           M+  G+ P+ +  +T  +   Q     E
Sbjct: 418 MVEKGVAPNVVTCATFIEIYCQEGNLAE 445



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 2/209 (0%)

Query: 4   KECH-LDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           K+C+ ++  ++ F ++ + G ++  + +   ++   C    +  A +L  ++    + P 
Sbjct: 157 KKCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPT 216

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L++A       +    +   M  +G  A++VTY+ LI+ Y  S+ +  A  VYE
Sbjct: 217 VFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYE 276

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMCE N+  ++  Y+ +I   C+ G +  A   F   +   ++P+  T+  LI G CKAG
Sbjct: 277 EMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAG 336

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A  L + M   G+  + ++ +T+ D
Sbjct: 337 QMEAAEILLEEMQCKGVDLNVVIFNTMMD 365



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 73/141 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E +L    +    +  RG+ P+I+TYNT+I  Y    ++ +A  L  ++    L P+  
Sbjct: 439 QEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVF 498

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   C   ++D+A  +F++ML KG + NV TY+ +I G  K      A  +Y+EM
Sbjct: 499 TYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEM 558

Query: 124 CENNISPNIVSYSILIDGLCK 144
               + P+   +  L+  L K
Sbjct: 559 MRMGLIPDDRVFEALVGSLHK 579


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 119/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL + G+++D+G +PDI T+NT+I G C ++R ++A+ L+  +    +  N
Sbjct: 460 LCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIAN 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LI AF + G + +A  + + ML +G   + +TY+ LI  + K    + A  +++
Sbjct: 520 TVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFD 579

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ +S ++LI+GLC+ G +  AL      +   L PDVVTY  LI G CK G
Sbjct: 580 EMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMG 639

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA  L++ +   GI PD +  +TL
Sbjct: 640 NIREAFNLFNKLQAEGIQPDAITYNTL 666



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 32/239 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ ALKL  ++   G  PD+ T+N +I G C LNR+ E  +L +++      PN
Sbjct: 253 LSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPN 312

Query: 62  SIT-------------------------------FTILIDAFCKEGRMDDA-TMMFSKML 89
            IT                               FTILI+ + K GR+D+A   ++ KM+
Sbjct: 313 DITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMI 372

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           + G + +V T++ LI G  K   M SA D+  +M  N  +PN+++Y+ L+DG CK+  +E
Sbjct: 373 KNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLE 432

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           EA Y  +         +++ Y +L+R  CK G+  +A+ +   M   G  PD    +TL
Sbjct: 433 EAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTL 491



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 40/244 (16%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++  RG  P+ ITY  ++ G C + ++DEA  L  K+      PN + FTILI+ +
Sbjct: 299 KLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGY 354

Query: 73  CKEGRMDDA-TMMFSKMLEKGPKA-----------------------------------N 96
            K GR+D+A   ++ KM++ G +                                    N
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           ++TY+ L+DG+ K   ++ A  V  EM       NI+ Y++L+  LCK G + +AL    
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLG 474

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
              D    PD+ T+  LI G CK  R  +A+ LY  ML +G++ + +  +TL    L+  
Sbjct: 475 EMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534

Query: 217 GSQE 220
             QE
Sbjct: 535 AIQE 538



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 107/196 (54%), Gaps = 1/196 (0%)

Query: 3   IKECHLDAALK-LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +K   LD A   L+ ++   G  PD+ T+NT+I G C    +  AV +   ++     PN
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+T L+D FCK+ ++++A  + ++M  KG + N++ Y+ L+    K+  +  A D+  
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLG 474

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    P+I +++ LI GLCK    E+AL  +   L + ++ + VTY  LI  + + G
Sbjct: 475 EMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534

Query: 182 RPTEAMQLYDSMLRNG 197
              EA++L + ML  G
Sbjct: 535 AIQEALKLVNDMLFRG 550



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 111/202 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  + +A+ +   ++  G  P++ITY T++ G+C  N+L+EA  +  +++    + N
Sbjct: 390 LCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELN 449

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +L+ A CK G++  A  M  +M +KG K ++ T++ LI G  K    + A  +Y 
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + +  N V+Y+ LI    + G ++EAL   +  L      D +TY  LI+ +CK G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              +A+ L+D M+R  ++P  +
Sbjct: 570 ATEKALGLFDEMVRKDLVPSNI 591



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 100/172 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  ALKL   +  RG   D ITYN +I  +C L   ++A+ LF+++    L P++I+  +
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  C+ G++ +A  +   M+ +G   +VVTY+ LI+G  K  N++ AF+++ ++    
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           I P+ ++Y+ LI   C+ G+ ++A       ++N  +P+ VT+ IL+  + K
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 5/200 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A  +F ++  +G+ P + T+  ++   C +N +D A  L   +T     PNS+ +  LI
Sbjct: 191 VAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLI 250

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  K  R+++A  +  +M   G   +V T++ +I G  +   +     + + M     +
Sbjct: 251 HALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFT 310

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ- 188
           PN ++Y +L++GLC+ G ++EA       L+    P+ V + ILI GY K+GR  EA   
Sbjct: 311 PNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAF 366

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           LYD M++NG  PD    +TL
Sbjct: 367 LYDKMIKNGCRPDVFTFNTL 386



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 107/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A  +  +++ +G E +I+ YN ++   C   ++ +A+ +  +++    KP+  
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI   CK  R +DA  ++  ML  G  AN VTY+ LI  + +   ++ A  +  +M
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                  + ++Y+ LI   CK G  E+AL  F   +   L+P  ++  +LI G C+ G+ 
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A++L   M+  G+ PD +  ++L +
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLIN 633



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 5/205 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  L   +T  G  P+ + Y T+I      +R++EA++L E++  +   P+  TF 
Sbjct: 223 EVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFN 282

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I   C+  R+ +   +  +ML +G   N +TY  L++G  +   +  A    + +   
Sbjct: 283 DVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNK 338

Query: 127 NISPNIVSYSILIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             +PN V ++ILI+G  K G ++EA  + +   + N   PDV T+  LI G CK G    
Sbjct: 339 VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGS 398

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+ + + M  NG  P+ +  +TL D
Sbjct: 399 AVDMVNDMSANGCTPNLITYTTLLD 423



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 47/103 (45%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           +Y+ ++D    +     A +V+ EM    + P + ++ +++  LC    ++ A       
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +  +P+ V Y  LI    K  R  EA++L + M   G +PD
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPD 277


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 111/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   KL   +   G+ PD+ TY+ +I G C  +++D A +LF+++    L PN 
Sbjct: 188 IRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++  A D+ +E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 368 SVDAEKMMREMLSVGLKPD 386



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    + P+  
Sbjct: 154 KEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD A  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G + +A    H  +D      L PD +TY  LI G CK
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLNQA----HDLIDEMSMKGLKPDKITYTTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 358



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G ++ A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I   CK G
Sbjct: 342 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M  +G  P      ++  YN+  +G
Sbjct: 402 DVGKGSKLLKEMQXDGHAP------SVVTYNVLMNG 431



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 107/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + +  + G    +  +N +   +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S M   G   +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLNQAHDLIDEMSMKGLKPDKITYTTLID 325



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE  
Sbjct: 75  FSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYEEFL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL    CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +M  +G+ PD    S L
Sbjct: 195 EGFKLKSAMHASGVXPDVYTYSVL 218


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A  L  ++ + G +P+ +TY TI+ G C +   D A+ L  K+    +K +
Sbjct: 20  LCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKAD 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T +ID  CK+G    A  +F++M +KG   NV+TY+C+IDG         A  +  
Sbjct: 80  VVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLR 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E+N+ P++V+++ LI+   K G + EA   +   L  ++ PD +TY  LI G+CK  
Sbjct: 140 DMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHS 199

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +A  ++D M+  G  P+ + ++TL
Sbjct: 200 RLDDAKHIFDLMVSKGGSPNVITINTL 226



 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 110/193 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ D+G+ P+++TYN +I G CS  +  +A QL   +    + P+
Sbjct: 90  LCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPD 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+AF KEG++ +A  ++ +ML +    + +TY+ LIDG+ K   +  A  +++
Sbjct: 150 VVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFD 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     SPN+++ + LI G C+   +++ +   H  L   L+PD V+Y  LI G+C+AG
Sbjct: 210 LMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAG 269

Query: 182 RPTEAMQLYDSML 194
               A  L+  M+
Sbjct: 270 DLNAAQDLFQEMI 282



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 109/193 (56%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + ++G + D++ +NT++ G C   R+ EA  L +++     +PN +T+  +++  CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            D A  +  KM E   KA+VV Y+ +ID   K  +   A +++ EM +  I PN+++Y+ 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +IDG C  G   +A       +++++ PDVVT+  LI  + K G+ +EA +LY  ML   
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 198 IMPDGLLLSTLAD 210
           I PD +  ++L D
Sbjct: 181 IFPDTITYNSLID 193



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A  +F  +  +G  P++IT NT+I G C   R+D+ ++L  ++    L P+S+
Sbjct: 197 KHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSV 256

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK 91
           ++  LI  FC+ G ++ A  +F +M+ +
Sbjct: 257 SYNTLIHGFCQAGDLNAAQDLFQEMISQ 284


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 1/199 (0%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD  +Y  +I GYC   R DEA ++F+ +  + L P  +T+  L+  +C   R+DDA
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +ML KG    VVTY+ ++ G F+++    A ++Y  M  +    +I +Y+I+++G
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK   ++EA   F       L  +++T+ I+I    K GR  +AM L+ ++  NG++P+
Sbjct: 564 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623

Query: 202 GLLLSTLADYNLQSSGSQE 220
            +    +A+ NL   GS E
Sbjct: 624 VVTYRLVAE-NLIEEGSLE 641



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 111/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A K+F  +   GL P  +TYNT++ GYCS +R+D+A  LF ++    + P  +T+  +
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +    +  R  +A  ++  M+  G K ++ TY+ +++G  KS  +  AF +++ +C   +
Sbjct: 526 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 585

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             NI++++I+I  L K G  E+A+  F     N L+P+VVTY ++     + G   E   
Sbjct: 586 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDS 645

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+ +M +NG  P+  +L+ L
Sbjct: 646 LFSAMEKNGTAPNSQMLNAL 665



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 101/203 (49%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C L         + + GL PD   +N     Y     +D+A+ +F K+    L PN + +
Sbjct: 288 CALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 347

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             LIDA CK GR+DDA + F++M+ +G   N+V ++ L+ G       + A ++  EM +
Sbjct: 348 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 407

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I PN V ++ LI  LC  G + E            + PD  +Y  LI GYC AGR  E
Sbjct: 408 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDE 467

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A +++D M+  G+ P  +  +TL
Sbjct: 468 AEKVFDGMVSIGLSPTEVTYNTL 490



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 3/201 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  +F Q+ D G++P+  TYN +I GY S+ +  E VQ+ EK++   LKP+  T+  
Sbjct: 223 FDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGS 282

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C    M         M+E G   +   ++     Y K   +  A D++ +M ++ 
Sbjct: 283 LLNYLCALSEMHS---FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SPN+V+Y  LID LCK G +++A   F+  ++  + P++V +  L+ G C   +   A 
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 399

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L   ML  GI P+ +  +TL
Sbjct: 400 ELVYEMLDQGICPNAVFFNTL 420



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK---PNSITFTILID 70
           L  ++ + G  PD ++Y+ ++ G+C+ NR +EA++L   +     +   PN +T+T +ID
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    D A  +F +M++ G K N  TY+CLI GY      K    + E+M    + P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  +Y  L++ LC       AL   H  LD    N L PD   + I    Y K G   +A
Sbjct: 276 DCYTYGSLLNYLC-------ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 328

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M +++ M ++G+ P+ +    L D
Sbjct: 329 MDIFNKMRQHGLSPNVVNYGALID 352



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 17/214 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++EC +  A             P+  TY+ +I   C + RL  +   F  +     + N
Sbjct: 86  MVRECSIKVA-------------PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVN 132

Query: 62  SITFTILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            I    L+   C   R+ +A  ++  +M E G   + V+YS L+ G+      + A ++ 
Sbjct: 133 DIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELL 192

Query: 121 EEMCENN---ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             M  ++     PN+V+Y+ +IDGLCK  L + A   F   +DN + P+  TY  LI GY
Sbjct: 193 RMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGY 252

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              G+  E +Q+ + M   G+ PD     +L +Y
Sbjct: 253 LSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNY 286



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 89/180 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  LF ++  +G+ P ++TYNTI+ G     R  EA +L+  +     K +  T+ 
Sbjct: 499 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 558

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+++  CK   +D+A  MF  +  KG + N++T++ +I    K    + A D++  +  N
Sbjct: 559 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 618

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V+Y ++ + L + G +EE    F     N   P+      L+R     G  + A
Sbjct: 619 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 53/212 (25%)

Query: 43  LDEAVQLFEKLT------------------------------------------------ 54
           LD+A++LF++L                                                 
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRE 89

Query: 55  -CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
             +++ PN+ T++ILI   C+ GR+  +   F  +L+ G + N +  + L+ G    + +
Sbjct: 90  CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRV 149

Query: 114 KSAFDV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVT 169
             A DV  + M E   +P+ VSYSIL+ G C     EEAL       ++H     P+VVT
Sbjct: 150 GEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVT 209

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           Y  +I G CKA     A  ++  M+ NG+ P+
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPN 241



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  L  +GL+ +IIT+  +I       R ++A+ LF  +    L PN +T+ +
Sbjct: 570 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 629

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   +EG +++   +FS M + G   N    + L+       ++  A     ++ E N
Sbjct: 630 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 689

Query: 128 ISPNIVSYSILI 139
            S    + S+LI
Sbjct: 690 FSVEASTTSLLI 701



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 52/178 (29%)

Query: 68  LIDAFCKEGRM--DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN------------- 112
           +I A  + G +  DDA  +F ++L     A+VV ++ +++   ++               
Sbjct: 18  IIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESE 77

Query: 113 -MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----------N 161
            + S F+     C   ++PN  +YSILI  LC+ G ++ +   F   L           N
Sbjct: 78  LVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVIN 137

Query: 162 HLL--------------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            LL                          PD V+Y+IL++G+C   R  EA++L   M
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195


>gi|357499031|ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494819|gb|AES76022.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 124/210 (59%), Gaps = 23/210 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ ++  + + PD+ITY+ +I G+C + +L++ + LF K+T   + P+  TF I
Sbjct: 66  VNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNI 125

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY--FKSQNMKS---------- 115
            +DAFCKEGR+ +A  + S M++ G K +VVTY+ L++GY   K  NM            
Sbjct: 126 SVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSG 185

Query: 116 -------AFDVYEEM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
                  A ++YEEM C  NI P++V+YS L+D +  RG   + +  ++  LD  + PD+
Sbjct: 186 VVKMIDEAINLYEEMHCRKNI-PDVVTYSSLVDIMHDRGQPPDII-TYNSILDG-IRPDM 242

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
            TY I I+G C++G+  +A ++++ +L  G
Sbjct: 243 YTYTIFIKGLCQSGKLKDARKVFEDLLVKG 272



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 92/164 (56%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G C + +   A+QL  ++    ++PN I ++ +ID  CK   ++DA  ++S+M+ K    
Sbjct: 24  GSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISP 83

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +V+TYS LI G+     +     ++ +M   NI+P++ +++I +D  CK G ++EA Y  
Sbjct: 84  DVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVL 143

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
              + + + P VVTY  L+ GYC       A  ++++M ++G++
Sbjct: 144 SMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVV 187



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 77/139 (55%)

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  CK G+   A  +  ++  K  + NV+ YS +IDG  K + +  AFD+Y EM    IS
Sbjct: 23  DGSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRIS 82

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++++YS LI G C  G + + +  F+     ++ PDV T+ I +  +CK GR  EA  +
Sbjct: 83  PDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYV 142

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              M+++GI P  +  +TL
Sbjct: 143 LSMMMKHGIKPSVVTYNTL 161



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 110/215 (51%), Gaps = 21/215 (9%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-------------SLNR------LD 44
           KE  +  A  +   +   G++P ++TYNT++ GYC             ++N+      +D
Sbjct: 132 KEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVVKMID 191

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           EA+ L+E++ C +  P+ +T++ L+D     G+  D  + ++ +L+ G + ++ TY+  I
Sbjct: 192 EAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPD-IITYNSILD-GIRPDMYTYTIFI 249

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G  +S  +K A  V+E++     + ++ +Y+++I G C +GL +EAL       DN  +
Sbjct: 250 KGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCI 309

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           PD   Y I+I    +      A +L   M+  G++
Sbjct: 310 PDAKIYEIVILSLFEKDENDMAEKLLREMIARGLL 344


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 113/211 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+ L  ++  +G  PDI +YNTII   C+  +++EA  +FE L    +  N
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +I A  ++GR  DA  +  +M+  G   +VV+Y+ LI    K  N+  +  + E
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I PN VSY+ILI  LCK   + +AL      L+  L PD+VTY  LI G CK G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
               A+ L + +    + PD +  + L  ++
Sbjct: 606 WMHAALNLLEKLHNENVHPDIITYNILISWH 636



 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 5/219 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  L  A +L+  +  +G +PD  TY+ ++ G C L R+  AV+L  ++      PN 
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNV 381

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+TI++ +FCK G  DD   +  +M  KG   N   Y+ +I    K   M  A  + +E
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     +P+I SY+ +I  LC    MEEA + F   L+  ++ + +TY  +I    + GR
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 501

Query: 183 PTEAMQLYDSMLRNGIMPD-----GLLLSTLADYNLQSS 216
             +A++L   M+ +G   D     GL+ +   D N+  S
Sbjct: 502 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 104/200 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D    L  +++ +GL  +   YN +I   C   R+DEA+ L +++      P+  ++  +
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C   +M++A  MF  +LE+G  AN +TY+ +I    +    + A  + +EM  +  
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 517

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           S ++VSY+ LI  +CK G ++ +L       +  + P+ V+Y ILI   CK  R  +A++
Sbjct: 518 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 577

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L   ML  G+ PD +  +TL
Sbjct: 578 LSKQMLNQGLAPDIVTYNTL 597



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 4/200 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  + G++     E +++ +NT+I G  +  +L EA +L+E +     +P++ T++IL
Sbjct: 297 DEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   CK GR+  A  +  +M +KG   NVVTY+ ++  + K+        + EEM    +
Sbjct: 353 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           + N   Y+ +I  LCK G M+EA+            PD+ +Y  +I   C   +  EA  
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +++++L  G++ +G+  +T+
Sbjct: 473 MFENLLEEGVVANGITYNTI 492



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 90/150 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++     A++L  ++   G   D+++YN +I   C    +D ++ L E++    +KPN
Sbjct: 496 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 555

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++ ILI   CKE R+ DA  +  +ML +G   ++VTY+ LI+G  K   M +A ++ E
Sbjct: 556 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 615

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           ++   N+ P+I++Y+ILI   CK  L+++A
Sbjct: 616 KLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 4/188 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G   D+ T++ ++ G C L R+ EA +L +++      P  +T+  L+ 
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  + D+A  M  ++    P+ NVV ++ +I G      +  A ++YE M      P
Sbjct: 289 GLCRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +YSIL+ GLCK G +  A+            P+VVTY I++  +CK G   +   L 
Sbjct: 345 DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404

Query: 191 DSMLRNGI 198
           + M   G+
Sbjct: 405 EEMSAKGL 412



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 33/229 (14%)

Query: 5   ECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +CH DA L L+ ++  R  + P   T+       C L R DEA+ L   +      P+++
Sbjct: 153 DCHADA-LALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAV 211

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I A C +G + +A  + ++ML  G  A+V T+  ++ G      ++ A  + + M
Sbjct: 212 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 271

Query: 124 CENNISPNIVSYSILIDGLCK-------------------------------RGLMEEAL 152
                 P +++Y  L+ GLC+                                G + EA 
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEAT 331

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +         PD  TY+IL+ G CK GR   A++L   M + G  P+
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN 380


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++ DRG+ P +  +N +I G C   R  +A+  F+ +   +  P+
Sbjct: 40  LCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPD 99

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            ITF IL+DA  K GR+++A  +F  M        NVVTY+ +I+G  K   +  A ++ 
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M E    PN+++YS+L++GLCK G  ++              PDV+ Y  L+ G CK+
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
            R  EA++L   M+R+G  P      T+  YN
Sbjct: 220 RRLDEALELVQLMIRSGCYP------TVVTYN 245



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 4/209 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++      A++LF    +    P+  TY ++I G C   +LD+A +L +++    + P
Sbjct: 7   LLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
                  +I   CK GR  DA   F  +       +++T++ L+D   KS  ++ AF ++
Sbjct: 64  GVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123

Query: 121 EEM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           E M   +   PN+V+Y+ +I+GLCK G ++ A+       +    P+V+TY++L+ G CK
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           AGR  +   L   M R G  PD ++ +TL
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 42/237 (17%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +L   +++RG  PD+I YNT+I G C   RLD+A  L +++   +  P+ IT++
Sbjct: 256 QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYS 315

Query: 67  ILIDAFCKEGRMDD------ATMMFSKMLEKGPKANVVTYSCLIDGYF------------ 108
            +ID  CK+ R+D       A  +   M + G   N  TY+ +I+G              
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 109 -----------------------KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                                  KS ++ +A+ ++  M E    PN V+Y+ LIDGL K 
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           G +++A+  F   +++   P V TY  ++ G C  GR  EA+++ + M+     PDG
Sbjct: 436 GEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+K   ++ A ++F  + T     P+++TY T+I G C   +LD A++L + +      P
Sbjct: 110 LVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP 169

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N IT+++L++  CK GR D    +  +M  +G + +V+ Y+ L++G  KS+ +  A ++ 
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M  +   P +V+Y+ L++  C+   ++ A        +    PDV+ Y  +I G C+ 
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  +A  L   M+    +PD +  ST+ D
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIID 319



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 118/225 (52%), Gaps = 6/225 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A++L   + + G  P++ITY+ ++ G C   R D+   L +++T    +P+
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +  L++  CK  R+D+A  +   M+  G    VVTY+ L++ + +S+ +  AF + +
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P++++Y+ +I GLC+   +++A       +    +PDV+TY+ +I G CK  
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 182 RP------TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R         A ++ + M + G  P+    + + +   ++  SQ+
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 1/191 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+AA ++   +   G  P+  TY  +I G C   +  +A+ L  ++   ++ P+  +F+
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I + CK   +D A  +F  M E+  K N V Y+ LIDG  K   +  A  V+E M E 
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE- 450

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  P + +Y+ ++DGLC  G +EEA+      +     PD  +Y  LIRG C+     EA
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510

Query: 187 MQLYDSMLRNG 197
            +L+ ++   G
Sbjct: 511 YELFQAVEAKG 521



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 41/250 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---------- 51
           L K    D    L  ++T RG +PD+I YNT++ G C   RLDEA++L +          
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT 240

Query: 52  --------KLTC-----------VQL------KPNSITFTILIDAFCKEGRMDDATMMFS 86
                   +L C           +Q+       P+ I +  +I   C++ R+DDA  +  
Sbjct: 241 VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLK 300

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQN------MKSAFDVYEEMCENNISPNIVSYSILID 140
           +M+      +V+TYS +IDG  K         +++A ++ E M +    PN  +Y+++I+
Sbjct: 301 QMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIE 360

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLC+    ++AL      +D+ ++PD+ +++++I   CK+     A +++  M      P
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420

Query: 201 DGLLLSTLAD 210
           + +  + L D
Sbjct: 421 NPVAYAALID 430



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 10/180 (5%)

Query: 38  CSLNRL------DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           C+LN L       +AVQLF +  CV   PN  T+  LI   CK G++D A  +  +M ++
Sbjct: 3   CALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G    V  ++ +I G  K+     A   ++ +     +P+I++++IL+D L K G +EEA
Sbjct: 60  GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119

Query: 152 LYAFHCA-LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              F      +  LP+VVTY  +I G CK G+   A++L D M   G  P+ +  S L +
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 1/192 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ D  + PD+ +++ +I   C  + LD A ++F  ++  + KPN + +  LID
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G +D A  +F  M+E   +  V TY+ ++DG      ++ A  + E M      P
Sbjct: 431 GLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  SY  LI GLC+   +EEA   F          +V  Y +L+   CK  R ++A  + 
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549

Query: 191 DSMLRNGIMPDG 202
           + ++  G    G
Sbjct: 550 NKLIEAGYKQQG 561



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++F +L      P + TYN+++ G C + R++EAV++ E +   +  P+
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++  LI   C+   +++A  +F  +  KG    V  Y+ L++   K + +  A  V  
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550

Query: 122 EMCE 125
           ++ E
Sbjct: 551 KLIE 554



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%)

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E    PN  +Y  LI GLCK G +++A        D  + P V  +  +I+G CKAGR  
Sbjct: 23  EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFG 82

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +A+  + ++      PD +  + L D  ++S   +E
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 47/88 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+++   +  +   PD  +Y  +I G C ++ ++EA +LF+ +           + 
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPK 94
           +L++  CK+ R+ DA  + +K++E G K
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 114/198 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  L++  ++  +G E   +TYNTII G     RL++A+ L+  L      P   
Sbjct: 820  KSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 879

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K G+M DA  +F++MLE G K N   Y+ L++G+  + N ++   ++E+M
Sbjct: 880  TYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM 939

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             E  I+P+I SY++LID LC  G + + L  F   L+  L PD++ Y +LI G  K+ R 
Sbjct: 940  VEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERI 999

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ L++ M + GI+P+
Sbjct: 1000 EEAVCLFNEMKKKGIVPN 1017



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 1/212 (0%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   +  A  LF ++ + G +P+   YN ++ G+      +   Q+FEK+    + P+
Sbjct: 888  LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPD 947

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++T+LID  C  GR++D    F ++LE G + +++ Y+ LIDG  KS+ ++ A  ++ 
Sbjct: 948  IKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFN 1007

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM +  I PN+ +Y+ LI  L K G   EA   +   L     P+V TY  LIRGY  +G
Sbjct: 1008 EMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSG 1067

Query: 182  RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
                A   YD +   G+     L+S L D NL
Sbjct: 1068 STDNAYAAYDCVAV-GVSLKTALISGLVDENL 1098



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 110/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D  L L  ++  RG++P++ +Y   I       R DEA Q+  K+     KP+ +
Sbjct: 225 KKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVV 284

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T++I   C  GR+ DA  +F KM     K + VTY  L+D    S + +S  +++  M
Sbjct: 285 THTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAM 344

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + NIVSY+ ++D LC+ G ++EAL  F    +  + P+  +Y  LI G+ KA   
Sbjct: 345 VADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMF 404

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
             A++L++ M   G  P+G       +Y  +S  S
Sbjct: 405 DRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 439



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +    D A ++ G++ D G +PD++T+  +I   C   RL +A  +F K+     KP
Sbjct: 257 VLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKP 316

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+D     G       +++ M+  G   N+V+Y+ ++D   +   +  A  V+
Sbjct: 317 DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVF 376

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL-----LPDVVTYAILIR 175
           +EM E  ISP   SY+ LI G  K  + + AL  F     NH+      P+  T+ + I 
Sbjct: 377 DEMKEKGISPEQYSYNSLISGFLKADMFDRALELF-----NHMNACGPSPNGYTHVLFIN 431

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD----GLLLSTLA 209
            Y K+G+  +A+Q Y+ M   GI+PD      +LS+LA
Sbjct: 432 YYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLA 469



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 100/201 (49%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + ++++  +   G   +I++Y  ++   C + RLDEA+ +F+++    + P   ++  LI
Sbjct: 336 SVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLI 395

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K    D A  +F+ M   GP  N  T+   I+ Y KS     A   YE M    I 
Sbjct: 396 SGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIV 455

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++ + + ++  L + G +  A   F+   D  + PD +TY ++I+   KA +  EAM  
Sbjct: 456 PDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNF 515

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+  G +PD L L++L D
Sbjct: 516 FSDMVETGCVPDVLALNSLID 536



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 100/191 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF +    G+     +YN++I G    N +D A  LF ++  +   P+  T+ +++D
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K  R+++   + ++M  KG ++  VTY+ +I G  KS+ ++ A D+Y  +     SP
Sbjct: 817 AMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y  L+DGL K G M +A   F+  L+    P+   Y IL+ G+  AG      Q++
Sbjct: 877 TPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIF 936

Query: 191 DSMLRNGIMPD 201
           + M+  GI PD
Sbjct: 937 EKMVEQGINPD 947



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 99/202 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD AL +F ++ ++G+ P+  +YN++I G+   +  D A++LF  +      PN  T  
Sbjct: 368 RLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 427

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + I+ + K G+   A   +  M  KG   +V   + ++    +S  +  A  V+ E+ + 
Sbjct: 428 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDM 487

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP+ ++Y+++I    K    +EA+  F   ++   +PDV+    LI    K G+  EA
Sbjct: 488 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEA 547

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L+  +    I P     +TL
Sbjct: 548 WKLFHQLKEMKIEPTNGTYNTL 569



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 20/232 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  A ++F +L D G+ PD ITY  +I      ++ DEA+  F  +      P+
Sbjct: 468 LARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD 527

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K G+ ++A  +F ++ E   +    TY+ L+ G  +   +K    + E
Sbjct: 528 VLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   PN+++Y+ ++D L K G +  A+   +   +    PD+ +Y  ++ G  K  
Sbjct: 588 EMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEE 647

Query: 182 RPTEAMQLY------------------DSMLRNGIMPDGLLLSTLADYNLQS 215
           R  EA +++                   S ++NG+M +   L T+ +Y L++
Sbjct: 648 RFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEA--LHTVKEYILKA 697



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 41/246 (16%)

Query: 2   LIKECHLDAALKLF-------------------------GQ----------LTDRGLEPD 26
            +K    D AL+LF                         GQ          +  +G+ PD
Sbjct: 398 FLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD 457

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           +   N ++       RL  A ++F +L  + + P++IT+T++I    K  + D+A   FS
Sbjct: 458 VAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFS 517

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M+E G   +V+  + LID  +K      A+ ++ ++ E  I P   +Y+ L+ GL + G
Sbjct: 518 DMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREG 577

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++E ++       +   P+++TY  ++    K G    A+ +  SM   G  PD     
Sbjct: 578 KVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPD----- 632

Query: 207 TLADYN 212
            L+ YN
Sbjct: 633 -LSSYN 637



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++F  +  + ++ ++ T+ T+  G      L  A      +    +  N  T+  LI   
Sbjct: 129 QVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFL 188

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +A  ++  M+E G   +V TYS L+  + K +++ +   +  EM    + PN+
Sbjct: 189 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNV 248

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            SY+I I  L +    +EA        D+   PDVVT+ ++I+  C AGR ++A  ++  
Sbjct: 249 YSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWK 308

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           M  +   PD +   TL D    S  SQ
Sbjct: 309 MKASDQKPDRVTYITLLDKCGDSGDSQ 335



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 9/196 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITF 65
           AL+LF   T    +P  + + T  C Y      +  R+ +  Q+F+ +    +K N  TF
Sbjct: 91  ALELF---TAAARQPTAV-HTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTF 146

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +      +G +  A +    M E G   N  TY+ LI    KS     A +VY+ M E
Sbjct: 147 ATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVE 206

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           + ISP++ +YS+L+    K+  ++  L+  +      + P+V +Y I IR   +A R  E
Sbjct: 207 DGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDE 266

Query: 186 AMQLYDSMLRNGIMPD 201
           A Q+   M  +G  PD
Sbjct: 267 AYQILGKMEDSGCKPD 282



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 91/200 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++ +  ++ +++    +  RG+  +      +I   C   +  EA QLF K   + +   
Sbjct: 713 ILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLK 772

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LI     E  +D A  +F++M   G   +  TY+ ++D   KS  ++    V  
Sbjct: 773 TGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQA 832

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K   +E+A+  ++  +     P   TY  L+ G  KAG
Sbjct: 833 EMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAG 892

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A  L++ ML  G  P+
Sbjct: 893 KMVDAENLFNEMLEYGCKPN 912



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 2/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+ +   +T++G  PD+ +YNT++ G     R +EA ++F ++  + L P+
Sbjct: 608 LSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPD 666

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
             T   ++ +F K G M +A     + + K     +  ++  L++G      ++ + +  
Sbjct: 667 YATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFA 726

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E +    I  N      LI  LCK     EA   F+      +     +Y  LIRG    
Sbjct: 727 ENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDE 786

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                A  L+  M R G  PD
Sbjct: 787 NLIDIAEDLFTEMKRLGCGPD 807



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 30/155 (19%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   ++ A+ LF ++  +G+ P++ TYN++I       +  EA Q++E+L     KPN
Sbjct: 993  LGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPN 1052

Query: 62   SITFTILIDAFCKEGRMDDATM------------------------------MFSKMLEK 91
              T+  LI  +   G  D+A                                +F++M  +
Sbjct: 1053 VFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRR 1112

Query: 92   GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            G   +  TY+ ++D   KS  ++    V EE+ E+
Sbjct: 1113 GCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 78/175 (44%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D  ++++++ G  +   ++++++  E +    +  N      LI   CK  +  +A  +F
Sbjct: 702 DKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLF 761

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           +K    G      +Y+ LI G      +  A D++ EM      P+  +Y++++D + K 
Sbjct: 762 NKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS 821

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +EE L               VTY  +I G  K+ R  +A+ LY +++  G  P
Sbjct: 822 MRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE + DDA  +F +ML KG   N V ++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SP++++Y+ LI GLCK+G +++A +         L PD +TY  LI G CK G  
Sbjct: 274 LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++     D +  + L
Sbjct: 334 DXAFEHXKRMIQENXRLDXVXYTAL 358



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 107/195 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  ++ D+A +LF+++    L PN + FT 
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 252

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A  + +EM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 312

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  +   D V Y  LI G C  GR  +A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAE 372

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 373 KMLREMLSVGLKPDA 387



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE   D A +LF ++  +GL P+ + + T+I G+C   R+D A+++++++    L P+ I
Sbjct: 224 KESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLI 283

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++  AF+  + M
Sbjct: 284 TYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRM 343

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + N   + V Y+ LI GLC  G   +A       L   L PD  TY ++I  +CK G  
Sbjct: 344 IQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +  +L   M R+G +P      ++  YN+  +G
Sbjct: 404 WKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K      A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V ++ LIDG CK G ++ A+  +   L   L PD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 297 DLKQAHHLIDEMSXKGLKPDKITYTTLID 325



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 77/140 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    LD A +  +++     + +
Sbjct: 292 LCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLD 351

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++     + +
Sbjct: 352 XVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411

Query: 122 EMCENNISPNIVSYSILIDG 141
           EM  +   P++V+Y++L++G
Sbjct: 412 EMQRDGHVPSVVTYNVLMNG 431



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVL 218


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 112/194 (57%), Gaps = 1/194 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +LF  +  RG  P+ +TYN ++ G C  ++ DEA +LF K+      P+ +T+T L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  FC  G+++ A  +F +M+ KG   +VV Y+CL+ G+F++     A  +++ M     
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAM 187
            P+ VS++I+IDGL K   +++A+  F     +H   PD+VTY  LI G C   R +EAM
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 188 QLYDSMLRNGIMPD 201
           +++  + R  + PD
Sbjct: 424 KVFKEIDRLKLSPD 437



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +  A  +F  + ++R + PD+++Y+ +I G+C ++ L  A +L++++  +   P
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+   ++   ++GR+ DA  ++ +M+  G   +V+TYS LI G+  ++    A +++
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M      PN V+Y+ L+ GLCK    +EA   F   ++    PD VTY  L+ G+C  
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A++++D M+  G  PD
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPD 331



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A KL+ Q+ D    P++ TYN  + G     R+ +A  ++E++      P+ IT++ 
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F    + D A  +F  M+ +G + N VTY+CL+ G  K      A +++ +M E  
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V+Y+ L+ G C  G +E+A+  F   +     PDVV Y  L++G+ +AG+P EA 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           QL+  M+     PD +  + + D
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMID 375



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 119/208 (57%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++  +  A  ++ ++   G  PD+ITY+T+I G+    + D+A +LFE +     +PN
Sbjct: 202 LMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+   CKE + D+A  +F KM+E+G   + VTY+ L+ G+     ++ A +V++
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P++V+Y+ L+ G  + G   EA   F   +     PD V++ I+I G  KA 
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381

Query: 182 RPTEAMQLYDSMLRN-GIMPDGLLLSTL 208
           R  +A+++++ M ++ G  PD +  ++L
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDLVTYNSL 409



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLK 59
           L K   +D+AL L   +  RG  PD+ T++ +I   C  +++ EA +  + +  T     
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +  ++  L+++ CK  ++  A  +FS M+ E+    +VV+YS LIDG+ K   +  A  
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +Y++M + N  PN+ +Y+  ++GL ++G + +A   +   +     PDV+TY+ LI G+ 
Sbjct: 179 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFS 238

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            A +  +A +L+++M+  G  P+ +  + L
Sbjct: 239 LARKHDQAHELFEAMISRGCRPNAVTYNCL 268



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 1/182 (0%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILIDAFCKEGRMDDATMMFS 86
            +YN+++   C   ++ +A  +F  +   + + P+ ++++ILID FCK   +  A  ++ 
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M++     NV TY+  ++G  +   +  A  VYEEM     SP++++YS LI G     
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR 241

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             ++A   F   +     P+ VTY  L+ G CK  +P EA +L+  M+  G  PD +  +
Sbjct: 242 KHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYT 301

Query: 207 TL 208
           TL
Sbjct: 302 TL 303



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 4/197 (2%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T +++I   C   R+D A+ L E +      P+  T ++LI+  CK  ++ +A      M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 89  LE--KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENNISPNIVSYSILIDGLCKR 145
                   ++  +Y+ L++   K++ +  AF ++  M  E ++ P++VSYSILIDG CK 
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
             +  A   +   +D + +P+V TY   + G  + GR  +A  +Y+ M+  G  PD +  
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 206 STL-ADYNLQSSGSQEH 221
           STL   ++L     Q H
Sbjct: 231 STLIHGFSLARKHDQAH 247



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 83/140 (59%), Gaps = 1/140 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+++F ++  +G +PD++ YN ++ G+    +  EA QLF+ +   + KP++++  I
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 68  LIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +ID   K  R+DDA  +F +M  + G   ++VTY+ LI G    Q +  A  V++E+   
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432

Query: 127 NISPNIVSYSILIDGLCKRG 146
            +SP+  ++++L++ +   G
Sbjct: 433 KLSPDPHAFNVLLEAMYAAG 452



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 1/76 (1%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   LD A+++F ++  D G  PD++TYN++I G C   RL EA+++F+++  ++L P
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436

Query: 61  NSITFTILIDAFCKEG 76
           +   F +L++A    G
Sbjct: 437 DPHAFNVLLEAMYAAG 452



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI---LIRGYCKAG 181
           E+    N V+++  + GLCK G +E+A  A     ++       +      +I+  CKAG
Sbjct: 4   ESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAG 63

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A+ L ++M++ G  PD
Sbjct: 64  RVDSALSLLETMIKRGYCPD 83


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++ DRG+ P +  +N +I G C   R  +A+  F+ +   +  P+
Sbjct: 40  LCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPD 99

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            ITF IL+DA  K GR+++A  +F  M        NVVTY+ +I+G  K   +  A ++ 
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M E    PN+++YS+L++GLCK G  ++              PDV+ Y  L+ G CK+
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
            R  EA++L   M+R+G  P      T+  YN
Sbjct: 220 RRLDEALELVQLMIRSGCYP------TVVTYN 245



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 4/209 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++      A++LF    +    P+  TY ++I G C   +LD+A +L +++    + P
Sbjct: 7   LLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
                  +I   CK GR  DA   F  +       +++T++ L+D   KS  ++ AF ++
Sbjct: 64  GVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123

Query: 121 EEM-CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           E M   +   PN+V+Y+ +I+GLCK G ++ A+       +    P+V+TY++L+ G CK
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           AGR  +   L   M R G  PD ++ +TL
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 42/237 (17%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +L   +++RG  PD+I YNT+I G C   RLD+A  L +++   +  P+ IT++
Sbjct: 256 QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYS 315

Query: 67  ILIDAFCKEGRMDD------ATMMFSKMLEKGPKANVVTYSCLIDGYF------------ 108
            +ID  CK+ R+D       A  +   M + G   N  TY+ +I+G              
Sbjct: 316 TIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 109 -----------------------KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                                  KS ++ +A+ ++  M E    PN V+Y+ LIDGL K 
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           G +++A+  F   +++   P V TY  ++ G C  GR  EA+++ + M+     PDG
Sbjct: 436 GEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L+K   ++ A ++F  + T     P+++TY T+I G C   +LD A++L + +      P
Sbjct: 110 LVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP 169

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N IT+++L++  CK GR D    +  +M  +G + +V+ Y+ L++G  KS+ +  A ++ 
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M  +   P +V+Y+ L++  C+   ++ A        +    PDV+ Y  +I G C+ 
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  +A  L   M+    +PD +  ST+ D
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIID 319



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 118/225 (52%), Gaps = 6/225 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A++L   + + G  P++ITY+ ++ G C   R D+   L +++T    +P+
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +  L++  CK  R+D+A  +   M+  G    VVTY+ L++ + +S+ +  AF + +
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P++++Y+ +I GLC+   +++A       +    +PDV+TY+ +I G CK  
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 182 RP------TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R         A ++ + M + G  P+    + + +   ++  SQ+
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 1/191 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+AA ++   +   G  P+  TY  +I G C   +  +A+ L  ++   ++ P+  +F+
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I + CK   +D A  +F  M E+  K N V Y+ LIDG  K   +  A  V+E M E 
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE- 450

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  P + +Y+ ++DGLC  G +EEA+      +     PD  +Y  LIRG C+     EA
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510

Query: 187 MQLYDSMLRNG 197
            +L+ ++   G
Sbjct: 511 YELFQAVEAKG 521



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 41/250 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---------- 51
           L K    D    L  ++T RG +PD+I YNT++ G C   RLDEA++L +          
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT 240

Query: 52  --------KLTC-----------VQL------KPNSITFTILIDAFCKEGRMDDATMMFS 86
                   +L C           +Q+       P+ I +  +I   C++ R+DDA  +  
Sbjct: 241 VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLK 300

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQN------MKSAFDVYEEMCENNISPNIVSYSILID 140
           +M+      +V+TYS +IDG  K         +++A ++ E M +    PN  +Y+++I+
Sbjct: 301 QMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIE 360

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLC+    ++AL      +D+ ++PD+ +++++I   CK+     A +++  M      P
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420

Query: 201 DGLLLSTLAD 210
           + +  + L D
Sbjct: 421 NPVAYAALID 430



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 10/180 (5%)

Query: 38  CSLNRL------DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           C+LN L       +AVQLF +  CV   PN  T+  LI   CK G++D A  +  +M ++
Sbjct: 3   CALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR 59

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G    V  ++ +I G  K+     A   ++ +     +P+I++++IL+D L K G +EEA
Sbjct: 60  GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119

Query: 152 LYAFHCA-LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              F      +  LP+VVTY  +I G CK G+   A++L D M   G  P+ +  S L +
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 1/192 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ D  + PD+ +++ +I   C  + LD A ++F  ++  + KPN + +  LID
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G +D A  +F  M+E   +  V TY+ ++DG      ++ A  + E M      P
Sbjct: 431 GLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  SY  LI GLC+   +EEA   F          +V  Y +L+   CK  R ++A  + 
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549

Query: 191 DSMLRNGIMPDG 202
           + ++  G    G
Sbjct: 550 NKLIEAGYKQQG 561



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++F +L      P + TYN+++ G C + R++EAV++ E +   +  P+
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++  LI   C+   +++A  +F  +  KG    V  Y+ L++   K + +  A  V  
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550

Query: 122 EMCE 125
           ++ E
Sbjct: 551 KLIE 554



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%)

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E    PN  +Y  LI GLCK G +++A        D  + P V  +  +IRG CKAGR  
Sbjct: 23  EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFG 82

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +A+  + ++      PD +  + L D  ++S   +E
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 47/88 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+++   +  +   PD  +Y  +I G C ++ ++EA +LF+ +           + 
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPK 94
           +L++  CK+ R+ DA  + +K++E G K
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 114/205 (55%), Gaps = 1/205 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN-RLDEAVQLFEKLTCVQLK 59
           +L++E  L+ A K +  + + GL P + + N +I   C  +  +D  +++F ++      
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCD 189

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+S T+  LI   C+ GR+D+A  +F++M+EK     VVTY+ LI+G   S+N+  A   
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EEM    I PN+ +YS L+DGLCK G   +A+  F   +     P++VTY  LI G CK
Sbjct: 250 VEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLL 204
             +  EA++L D M   G+ PD  L
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGL 334



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KLF ++ ++   P ++TY ++I G C    +DEA++  E++    ++PN  T++
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYS 266

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK+GR   A  +F  M+ +G + N+VTY+ LI G  K Q ++ A ++ + M   
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI-------LIRGYCK 179
            + P+   Y  +I G C      EA       +   + P+ +T+ I       ++RG C 
Sbjct: 327 GLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC- 385

Query: 180 AGRPTEAMQLYDSMLRNGI 198
              P+ A  LY SM   GI
Sbjct: 386 TNYPSRAFTLYLSMRSRGI 404



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 110/217 (50%), Gaps = 8/217 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A++   ++  +G+EP++ TY++++ G C   R  +A++LFE +     +PN +T+T
Sbjct: 242 NVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   CKE ++ +A  +  +M  +G K +   Y  +I G+      + A +  +EM   
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILG 361

Query: 127 NISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            I+PN ++++I       ++ GLC       A   +       +  +V T   L++  CK
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCT-NYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCK 420

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            G   +A+QL D ++ +G +P+      L  + L ++
Sbjct: 421 KGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNT 457



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)

Query: 34  IC-GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           IC GY  ++R  +++++F K+      P+   +  ++    +E +++ A   +  M E G
Sbjct: 92  ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151

Query: 93  PKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               V + + LI    ++   + +   ++ EM +    P+  +Y  LI GLC+ G ++EA
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              F   ++    P VVTY  LI G C +    EAM+  + M   GI P+    S+L D
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMD 270



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A++L  ++  +GL+PD   Y  +I G+C++++  EA    +++    + PN
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPN 366

Query: 62  SITFTI-------LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
            +T+ I       ++   C        T+  S M  +G    V T   L+    K    +
Sbjct: 367 RLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLS-MRSRGISVEVETLDSLVKCLCKKGEFQ 425

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            A  + +E+  +   PN  ++ +LI       ++ EA
Sbjct: 426 KAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEA 462


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 108/202 (53%), Gaps = 1/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +D AL++F  +  RG  PD++ YNT+I G+C + R+ EA  + +++    L P+
Sbjct: 607 FVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPS 666

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LID +CK G +D A    S+M+ K  + NV+TY+ LIDG   +     A  ++ 
Sbjct: 667 VVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWN 726

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     SPN +S+  LI GLCK G  + AL  F   +     PD + Y  LI  +    
Sbjct: 727 EMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFR-EMGERETPDTIVYVALITSFISNK 785

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
            PT A ++   M+  G  PD L
Sbjct: 786 NPTLAFEILKEMVAKGKFPDPL 807



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            AL +  ++   G EP I  Y  ++   C   R  EA     ++      P+ + ++  I
Sbjct: 545 GALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 604

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D F K   +D A  +F  +  +G   +VV Y+ LI+G+ K + +  A D+ +EM    + 
Sbjct: 605 DGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLV 664

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+Y++LIDG CK G +++A +     +     P+V+TY  LI G C AGRP +A+ L
Sbjct: 665 PSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHL 724

Query: 190 YDSMLRNGIMPD 201
           ++ M   G  P+
Sbjct: 725 WNEMRGKGCSPN 736



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 98/183 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A     ++   G  PDI+ Y+  I G+  +  +D+A+++F  +      P+ + +  LI+
Sbjct: 581 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 640

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  R+ +A  +  +M+ KG   +VVTY+ LIDG+ K+ ++  AF     M      P
Sbjct: 641 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREP 700

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LIDGLC  G  ++A++ ++        P+ +++  LI G CK G P  A+  +
Sbjct: 701 NVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYF 760

Query: 191 DSM 193
             M
Sbjct: 761 REM 763



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++EC+L     L  ++   G  P   T+N+I    C    +  A+ +  ++     +P  
Sbjct: 508 LEECYL-----LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWI 562

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +T+L+   CK  R  +A    ++M+ +G   ++V YS  IDG+ K + +  A +++ +
Sbjct: 563 KHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRD 622

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +C     P++V+Y+ LI+G CK   + EA       +   L+P VVTY +LI G+CK G 
Sbjct: 623 ICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGD 682

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A      M+     P+ +  +TL D
Sbjct: 683 IDQAFHCLSRMVGKEREPNVITYTTLID 710



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 94/203 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL LF  +   G + +++ YN +I    + NRL+E   L +++     +P   T   
Sbjct: 473 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 532

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +    C+   +  A  M  +M   G +  +  Y+ L+    K +    A +   EM    
Sbjct: 533 IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREG 592

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+IV+YS  IDG  K   +++AL  F         PDVV Y  LI G+CK  R +EA 
Sbjct: 593 FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAH 652

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            + D M+  G++P  +  + L D
Sbjct: 653 DILDEMVAKGLVPSVVTYNLLID 675



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 51/264 (19%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D AL +F ++  RG   D    + ++  +     +D+A +L E++  + ++ N  TF +
Sbjct: 250 FDKALSVFNEIYGRGW-VDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCV 308

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F ++ R+D A  +F KM + G   +V  Y  LI G    + ++ A  +  EM E  
Sbjct: 309 LIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELG 368

Query: 128 ISPNI---------------------------------VSYSILIDGLCKRGLMEEALYA 154
           I P+I                                 + Y+ +++GL     +++A Y 
Sbjct: 369 IDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYL 428

Query: 155 FHCAL-DNH---------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                 DN+               + PD  +++I+I G C  G+   A+ L+  M+R G 
Sbjct: 429 LRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGC 488

Query: 199 MPDGLLLSTLADYNLQSSGSQEHC 222
             + LL + L D  L +S   E C
Sbjct: 489 KQNVLLYNNLID-KLSNSNRLEEC 511



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 2/162 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ D G EPD  T  +++  YC+  + D+A+ +F ++         +  +IL+  F K G
Sbjct: 224 EMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSKCG 282

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A  +  +M + G + N  T+  LI G+ +   +  A  ++++M ++  +P++  Y 
Sbjct: 283 EVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYD 342

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            LI GLC +  +E+AL+      +  + PD+   + LI  YC
Sbjct: 343 ALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYC 383



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 18/215 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +++  +D AL+LF ++   G  PD+  Y+ +I G C+   +++A+ L  ++  + + P+
Sbjct: 313 FVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPD 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + LI A+C E  +D   ++  ++ +   +A ++ Y+ +++G    +++  A+ +  
Sbjct: 373 IQILSKLI-AYCSE-EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLR 430

Query: 122 EMCENN----------------ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
            M  +N                + P+  S+SI+IDGLC  G ++ AL  F   +      
Sbjct: 431 AMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQ 490

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +V+ Y  LI     + R  E   L   M  +G  P
Sbjct: 491 NVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRP 525



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 1/187 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+  ++N ++        +D      +++     +P+  T T ++ A+C   + D A  +
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F+++  +G     V  S L+  + K   +  AF++ E M +  I  N  ++ +LI G  +
Sbjct: 257 FNEIYGRGWVDGHV-LSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVR 315

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +  +++AL  F     +   PDV  Y  LI G C      +A+ L   M   GI PD  +
Sbjct: 316 QSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQI 375

Query: 205 LSTLADY 211
           LS L  Y
Sbjct: 376 LSKLIAY 382


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 110/200 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G  PD+ TY+ +I G C  +++D A +LF+++    L PN 
Sbjct: 184 IRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNX 243

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 244 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 303

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 304 MSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGR 363

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
             +A ++   ML  G+ PD 
Sbjct: 364 SVDAEKMLREMLSVGLXPDA 383



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +      P+  
Sbjct: 150 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVY 209

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD A  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 210 TYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQM 269

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A           L PD  TY  LI G CK G  
Sbjct: 270 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDL 329

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A      M++  I  D +  + L
Sbjct: 330 DTAFXHRKRMIQENIRLDDVAYTAL 354



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 113 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 172

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G   +V TYS LI+G  K   M  A ++++
Sbjct: 173 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFD 232

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 233 EMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 292

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 293 DLKQAHDLIDEMSXKGLKPDKFTYTTLID 321



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 106/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 218 LCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF   +
Sbjct: 278 LITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRK 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 338 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKG 397

Query: 182 RPTEAMQLYDSM 193
              +  +L   M
Sbjct: 398 DVWKGSKLLKEM 409



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 18/198 (9%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS------------------ITFTILID 70
           +Y T+I   C+   L EA  L E +   + K ++                    F+ LI 
Sbjct: 17  SYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLIT 76

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ E     
Sbjct: 77  AYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 136

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   E  +L 
Sbjct: 137 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 196

Query: 191 DSMLRNGIMPDGLLLSTL 208
            +ML +G  PD    S L
Sbjct: 197 SAMLASGXXPDVYTYSVL 214


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A +L  ++  +G EP ++TY ++I G   ++RLDEA  LFE+    +++ N + ++ 
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F K GR+D+A ++  ++++KG   N+ T++ L+D   K++ +  A   ++ M E  
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN V+Y ILI+GLCK     +A   +       + P  ++Y  +I G  KAG   EA 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 188 QLYDSMLRNGIMPD 201
            L+D    NG +PD
Sbjct: 783 ALFDRFKANGGVPD 796



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK    +   +LF  + ++G   D   YN +I G+C   ++++A QL E++     +P 
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +   K  + NVV YS LIDG+ K   +  A+ + E
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    +    P+ VTY ILI G CK  
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G+ P  +  +T+
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTM 768



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 101/201 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML +   LD A +L   +   GL P++ T N ++   C   +LDEA  +FE++      P
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + ITF  LID   K GR+DDA  ++ KML+   + N + Y+ LI  +F     +    +Y
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M   N SP++   +  +D + K G  E+    F        +PD  +Y+ILI G  KA
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   E  +L+ SM   G + D
Sbjct: 566 GFANETYELFYSMKEQGCVLD 586



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 1/219 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D+AL L  ++    L+ DI+ YN  I  +  + ++D A + F ++    LKP+ +
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I   CK  R+D+A  MF  + +         Y+ +I GY  +     A+ + E  
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++++Y+ ++  L K G ++EAL  F   +     P++ TY ILI   C+AG+ 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKL 393

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             A +L DSM + G+ P+   ++ + D   +S    E C
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  L  +   +G  P +I YN I+     + ++DEA+++FE++      PN  T+ I
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNI 382

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  C+ G++D A  +   M + G   NV T + ++D   KSQ +  A  ++EEM    
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+ +++  LIDGL K G +++A   +   LD+    + + Y  LI+ +   GR  +  
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++Y  M+     PD  LL+T  D
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMD 525



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 87/178 (48%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
             P    Y T+I  + ++N  D  + LF+++  +  +P    FT LI  F KEGR+D A 
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  +M      A++V Y+  ID + K   +  A+  + E+  N + P+ V+Y+ +I  L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           CK   ++EA+  F     N  +P    Y  +I GY  AG+  EA  L +     G +P
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + DA  ++ G+++  G  P + T   ++ G    N+L E   + + +   + +P    +T
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI AF      D    +F +M E G +  V  ++ LI G+ K   + SA  + +EM  +
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++  +IV Y++ ID   K G ++ A   FH    N L PD VTY  +I   CKA R  EA
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 187 MQLYDSMLRNGIMP 200
           +++++ + +N  +P
Sbjct: 293 VEMFEHLEKNRRVP 306



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 100/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++  + ++   PD+   NT +         ++   +FE++   +  P++ +++ILI   
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G  ++   +F  M E+G   +   Y+ +IDG+ K   +  A+ + EEM      P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    ++L D
Sbjct: 683 LMQKGLTPNLYTWNSLLD 700



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 74/150 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ AL  F  + +    P+ +TY  +I G C + + ++A   ++++    +KP+
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I++T +I    K G + +A  +F +    G   +   Y+ +I+G         AF ++E
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E     +  +  +  +L+D L K   +E+A
Sbjct: 822 ETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 2/171 (1%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           +NR  E  + +E+ T +   P S    +L+ A C+    D    +  +M   G   +V T
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN--FDALDQILGEMSVAGFGPSVNT 135

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
              ++ G  K+  ++  +DV + M +    P   +Y+ LI         +  L  F    
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +    P V  +  LIRG+ K GR   A+ L D M  + +  D +L +   D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246



 Score = 36.2 bits (82), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A  LF +    G  PD   YN +I G  + NR  +A  LFE+     L  +
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           + T  +L+D   K   ++ A ++ + + E G
Sbjct: 832 NKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 37/236 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G EP++ TY+ II  YC L++++EA ++F K+      PN++TF  LI 
Sbjct: 227 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 286

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID------------------------- 105
            FCK G ++DA  +F++M + G KA +VTY+ LID                         
Sbjct: 287 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 346

Query: 106 -----------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
                      G+  ++ +  A   ++EM E   +PN+++YSILIDGLCK   M+EA   
Sbjct: 347 PTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKT 405

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 +   P VVTY  LI G+CK G    A+  ++ M   G  P+ ++ +TL D
Sbjct: 406 LEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 101/183 (55%), Gaps = 1/183 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF +L   GL P I+TYN++I G+C   RL EA+Q F+++   +  PN IT++ILID
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILID 391

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK  RM +A      M   G    VVTY  LI+G+ K   +KSA   +E+M     +P
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP 451

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V ++ LIDGLCK     + L            PDV+TY  LI G C A R  +A +L+
Sbjct: 452 NTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 511

Query: 191 DSM 193
           D M
Sbjct: 512 DGM 514



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 40/240 (16%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A++ F ++   G+EPD+ +Y+ ++       R+ EA  LF  +TC    P+ +T+ 
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYN 212

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+D +CK G+  +A  +  ++L+ G + NV TYS +I+ Y K   ++ A++V+ +M E+
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF-----------------------------HC 157
           N  PN V+++ LI G CK G++E+A+  F                             + 
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332

Query: 158 ALD-------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+D         L P +VTY  LI+G+C A R +EAMQ +D M      P+ +  S L D
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILID 391



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 100/195 (51%), Gaps = 2/195 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLKPNSITFT 66
           L+ A+KLF ++   G +  I+TYNT+I   C     +  AV LF KL    L P  +T+ 
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC   R+ +A   F +M E     NV+TYS LIDG  K + MK A    E+M  +
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P +V+Y  LI+G CK G ++ AL  F         P+ V +  LI G CKA R  + 
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDG 472

Query: 187 MQLYDSMLRNGIMPD 201
           ++L   M   G  PD
Sbjct: 473 LRLLCHMHAEGCKPD 487



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 7/202 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A+ +F  +   GL P+  T NT++ G C + ++  A++LF ++      P S 
Sbjct: 44  KGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSA 103

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY---FKSQN-MKSAFDV 119
           +  IL+  F   GR+ DA      M +        TY+ ++ G     KS N ++ A + 
Sbjct: 104 SHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEF 163

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM  + + P++ SY IL+  L   G M EA +A   A+     PD++TY +L+ GYCK
Sbjct: 164 FKEMKASGVEPDLESYHILLSALSDSGRMAEA-HALFSAMTCS--PDIMTYNVLMDGYCK 220

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G+  EA  L   +L+ G  P+
Sbjct: 221 IGQTYEAQSLMKEILKAGYEPN 242



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 3/150 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A K    +   G  P ++TY  +I G+C    L  A+  FEK+      PN
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ F  LID  CK  R +D   +   M  +G K +V+TY+CLI G   +  ++ A  +++
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M     +PN+ +++ LI GLC +  +EEA
Sbjct: 513 GMA---CAPNVTTFNFLIRGLCAQKKVEEA 539



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++ G  S  + D+A++LF+++      PN+ T+ +LI  FCK G+M  A  +FS M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   N  T + L+ G  +   M SA  ++ EM      P   S++IL+ G    G + +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYC----KAGRPTEAMQLYDSMLRNGIMPD----G 202
           AL        +       TY ++++G C     A R  +AM+ +  M  +G+ PD     
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 203 LLLSTLAD 210
           +LLS L+D
Sbjct: 181 ILLSALSD 188


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 118/209 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+  A+++   +   G +PD+ TYN++I G C L  + EAV+  +++      PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPN 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LI   CKE ++++AT +   +  KG   +V T++ LI G   ++N + A +++E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+  +Y++LID LC +G ++EAL        +     V+TY  LI G+CKA 
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +++D M  +G+  + +  +TL D
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLID 513



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A +L   LT +G+ PD+ T+N++I G C       A++LFE++     +P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LID+ C +G++D+A  M  +M   G   +V+TY+ LIDG+ K+  ++ A ++++
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFD 494

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + +S N V+Y+ LIDGLCK   +E+A       +     PD  TY  L+  +C+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  +  +M  NG  PD +   TL
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTL 581



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 37/240 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL +  Q+   G    +ITYNT+I G+C  N++ EA ++F+++    +  NS+T+  
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK  R++DA+ +  +M+ +G K +  TY+ L+  + +  ++K A D+ + M  N 
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 128 ISPNIVSYSILIDGLCKRGLME-----------------------------------EAL 152
             P+IV+Y  LI GLCK G +E                                   EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630

Query: 153 YAFHCALD-NHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             F   L+ N   PD V+Y I+ RG C  G P  EA+     +L  G +P+   L  LA+
Sbjct: 631 NLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 103/188 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF ++  +G EPD  TYN +I   CS  +LDEA+ + +++       + IT+  LID
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  ++ +A  +F +M   G   N VTY+ LIDG  KS+ ++ A  + ++M      P
Sbjct: 479 GFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKP 538

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ L+   C+ G +++A         N   PD+VTY  LI G CKAGR   A +L 
Sbjct: 539 DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 191 DSMLRNGI 198
            S+   GI
Sbjct: 599 RSIQMKGI 606



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 1/209 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPN 61
           I+E  LD AL++  Q+ + G     ++ N I+ G+C   R+++A+   ++++      P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  L++  CK G +  A  +   ML++G   +V TY+ +I G  K   +K A +  +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   + SPN V+Y+ LI  LCK   +EEA           +LPDV T+  LI+G C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               AM+L++ M   G  PD    + L D
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLID 443



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  A+ +   +   GL PD  T+ TI+ GY     LD A+++ E++       +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++  +++  FCKEGR++DA     +M  + G   +  T++ L++G  K+ ++K A ++ 
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +    P++ +Y+ +I GLCK G ++EA+      +     P+ VTY  LI   CK 
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  EA +L   +   GI+PD
Sbjct: 379 NQVEEATELARVLTSKGILPD 399



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 1/185 (0%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D GL+PD   YN ++      N L        K++   +KP+  TF +LI A C+  +
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +  A +M   M   G   +  T++ ++ GY +  ++  A  + E+M E   S + VS ++
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 138 LIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ++ G CK G +E+AL +    +  +   PD  T+  L+ G CKAG    A+++ D ML+ 
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 197 GIMPD 201
           G  PD
Sbjct: 325 GYDPD 329



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   G +PD  TYN+++  +C    + +A  + + +T    +P+
Sbjct: 515 LCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK GR++ A+ +   +  KG       Y+ +I G F+ +    A +++ 
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFR 634

Query: 122 EMCENN-ISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM E N  +P+ VSY I+  GLC   G + EA+      L+   +P+  +  +L  G
Sbjct: 635 EMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 108/202 (53%), Gaps = 1/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   +D AL++F  +  RG  PD++ YNT+I G+C + R+ EA  + +++    L P+
Sbjct: 567 FVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPS 626

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LID +CK G +D A    S+M+ K  + NV+TY+ LIDG   +     A  ++ 
Sbjct: 627 VVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWN 686

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     SPN +S+  LI GLCK G  + AL  F   +     PD + Y  LI  +    
Sbjct: 687 EMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFR-EMGERETPDTIVYVALITSFISNK 745

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
            PT A ++   M+  G  PD L
Sbjct: 746 NPTLAFEILKEMVAKGKFPDPL 767



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            AL +  ++   G EP I  Y  ++   C   R  EA     ++      P+ + ++  I
Sbjct: 505 GALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 564

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D F K   +D A  +F  +  +G   +VV Y+ LI+G+ K + +  A D+ +EM    + 
Sbjct: 565 DGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLV 624

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+Y++LIDG CK G +++A +     +     P+V+TY  LI G C AGRP +A+ L
Sbjct: 625 PSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHL 684

Query: 190 YDSMLRNGIMPD 201
           ++ M   G  P+
Sbjct: 685 WNEMRGKGCSPN 696



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 98/183 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A     ++   G  PDI+ Y+  I G+  +  +D+A+++F  +      P+ + +  LI+
Sbjct: 541 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 600

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  R+ +A  +  +M+ KG   +VVTY+ LIDG+ K+ ++  AF     M      P
Sbjct: 601 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREP 660

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LIDGLC  G  ++A++ ++        P+ +++  LI G CK G P  A+  +
Sbjct: 661 NVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYF 720

Query: 191 DSM 193
             M
Sbjct: 721 REM 723



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++EC+L     L  ++   G  P   T+N+I    C    +  A+ +  ++     +P  
Sbjct: 468 LEECYL-----LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWI 522

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +T+L+   CK  R  +A    ++M+ +G   ++V YS  IDG+ K + +  A +++ +
Sbjct: 523 KHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRD 582

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +C     P++V+Y+ LI+G CK   + EA       +   L+P VVTY +LI G+CK G 
Sbjct: 583 ICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGD 642

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A      M+     P+ +  +TL D
Sbjct: 643 IDQAFHCLSRMVGKEREPNVITYTTLID 670



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 94/203 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL LF  +   G + +++ YN +I    + NRL+E   L +++     +P   T   
Sbjct: 433 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 492

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +    C+   +  A  M  +M   G +  +  Y+ L+    K +    A +   EM    
Sbjct: 493 IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREG 552

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+IV+YS  IDG  K   +++AL  F         PDVV Y  LI G+CK  R +EA 
Sbjct: 553 FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAH 612

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            + D M+  G++P  +  + L D
Sbjct: 613 DILDEMVAKGLVPSVVTYNLLID 635



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 2/162 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ D G EPD  T  +++  YC+  + D+A+ +F ++         +  +IL+  F K G
Sbjct: 184 EMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSKCG 242

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A  +  +M + G + N  T+  LI G+ +   +  A  ++++M ++  +P++  Y 
Sbjct: 243 EVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYD 302

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            LI GLC +  +E+AL+      +  + PD+   + LI  YC
Sbjct: 303 ALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-PYC 343



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 51/264 (19%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D AL +F ++  RG   D    + ++  +     +D+A +L E++  + ++ N  TF +
Sbjct: 210 FDKALSVFNEIYGRGW-VDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCV 268

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F ++ R+D A  +F KM + G   +V  Y  LI G    + ++ A  +  EM E  
Sbjct: 269 LIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELG 328

Query: 128 ISPNI---------------------------------VSYSILIDGLCKRGLMEEALYA 154
           I P+I                                 + Y+ +++GL     +++A Y 
Sbjct: 329 IDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYL 388

Query: 155 FHCAL-DNH---------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                 DN+               + P   +++I+I G C  G+   A+ L+  M+R G 
Sbjct: 389 LXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGC 448

Query: 199 MPDGLLLSTLADYNLQSSGSQEHC 222
             + LL + L D  L +S   E C
Sbjct: 449 KQNVLLYNNLID-KLSNSNRLEEC 471



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 18/215 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +++  +D AL+LF ++   G  PD+  Y+ +I G C+   +++A+ L  ++  + + P+
Sbjct: 273 FVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPD 332

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + LI  +C E  +D   ++  ++ +   +A ++ Y+ +++G    +++  A+ +  
Sbjct: 333 IQILSKLI-PYCSE-EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLX 390

Query: 122 EMCENN----------------ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
            M  +N                + P   S+SI+IDGLC  G ++ AL  F   +      
Sbjct: 391 AMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQ 450

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +V+ Y  LI     + R  E   L   M  +G  P
Sbjct: 451 NVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRP 485



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P+  T T ++ A+C   + D A  +F+++  +G     V  S L+  + K   +  AF+
Sbjct: 191 EPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSKCGEVDKAFE 249

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + E M +  I  N  ++ +LI G  ++  +++AL  F     +   PDV  Y  LI G C
Sbjct: 250 LIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLC 309

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
                 +A+ L   M   GI PD  +LS L  Y
Sbjct: 310 AKKEIEKALHLLSEMKELGIDPDIQILSKLIPY 342


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KLF Q+  RG+ P+  TY +++ G C   RLD+A+ L +++    L PN +
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+++D  CKEG++  A  + S M   G KAN + Y+ LI G+F ++N + A D+  EM
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 124 CEN-----------------------------------NISPNIVSYSILIDGLCKRGLM 148
                                                  + PN V Y+ ++D   K G  
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+   H   D+ L P+VVTY  LI G CKAG   EA+  +D M   G+ P+  + +TL
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 209 AD 210
            D
Sbjct: 556 ID 557



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 109/193 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL L  ++ ++G+E D+  Y T+I G C + +LDEA  L  K+    L+PN++ +T +
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DAF K G+  +A  +  K+ + G + NVVTY  LIDG  K+ ++  A   +++M E  +
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+  Y+ LIDG CK G + +A++  +  +D  +  D V Y  LI G+ K G    A  
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFA 605

Query: 189 LYDSMLRNGIMPD 201
           L   M+  G+  D
Sbjct: 606 LKAKMIETGLQLD 618



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 98/183 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ D GL+P+++TY  +I G C    + EA+  F+K+  + L PN   +T LID
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G +  A  + ++M++KG   + V Y+ LIDG+ K  +++ AF +  +M E  +  
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  Y+  I G C   +M+EA       +   + PD   Y  LIR Y K G   EA  L 
Sbjct: 618 DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQ 677

Query: 191 DSM 193
           + M
Sbjct: 678 NEM 680



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 113/219 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  LF ++   G  PD++TYN++I GY     L+E   L  ++       +
Sbjct: 209 LCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAAD 268

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ F K G ++ A   F +M   G  ANVVT S  +D + K   ++ A  ++ 
Sbjct: 269 VVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFA 328

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN  +Y+ L+DG CK G +++A+      +   L+P+VVTY +++ G CK G
Sbjct: 329 QMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG 388

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   A  +   M R G+  + LL +TL   +  +  S+ 
Sbjct: 389 KVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 104/186 (55%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P++ T+N +I   C    L EA  LF ++  +   P+ +T+  LID + K G +++  ++
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S+M + G  A+VVTY+ LI+ + K   ++ A+  + EM    +  N+V+ S  +D  CK
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            GL+ EA+  F       ++P+  TY  L+ G CKAGR  +A+ L D M+  G++P+ + 
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 205 LSTLAD 210
            + + D
Sbjct: 377 YTVMVD 382



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A   FG++   G+  +++T +T +  +C    + EA++LF ++    + PN  T+T 
Sbjct: 285 IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTS 344

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID---------------------- 105
           L+D  CK GR+DDA ++  +M+ +G   NVVTY+ ++D                      
Sbjct: 345 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404

Query: 106 -------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                        G+F ++N + A D+  EM    +  ++  Y  LI GLCK   ++EA 
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              H   D  L P+ V Y  ++  + KAG+ +EA+ L   +  +G+ P+ +    L D
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALID 522



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 99/200 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  L  ++ D GL P+ + Y TI+  +    +  EAV L  K+    L+PN
Sbjct: 454 LCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPN 513

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G + +A   F KM E G   NV  Y+ LIDG+ K  ++  A  +  
Sbjct: 514 VVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMN 573

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +S + V Y+ LIDG  K+G ++ A       ++  L  D+  Y   I G+C   
Sbjct: 574 EMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMN 633

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              EA  +   M+  GI PD
Sbjct: 634 MMQEARGVLSEMIGTGITPD 653



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 35/251 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ L  ++  +GL P+++TY  ++ G C   ++  A  +   +    +K N +
Sbjct: 351 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANEL 410

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
            +T LI                                      CK  ++D+A  +  KM
Sbjct: 411 LYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            + G + N V Y+ ++D +FK+     A  +  ++ ++ + PN+V+Y  LIDGLCK G +
Sbjct: 471 DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSI 530

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+  F    +  L P+V  Y  LI G+CK G  ++A+ L + M+  G+  D ++ ++L
Sbjct: 531 YEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSL 590

Query: 209 ADYNLQSSGSQ 219
            D +++    Q
Sbjct: 591 IDGHMKQGDLQ 601



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT--FTILIDAFCKEGRMDDATMMFS 86
            ++T++        LD+AV+   ++  +++ PN+ T    +L  A  ++G +        
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL------VR 188

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           ++ E  P  NV T++ +ID   K   +  A  ++  M     SP++V+Y+ LIDG  K G
Sbjct: 189 RLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 248

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +EE          +    DVVTY  LI  + K G   +A   +  M R G+M + + LS
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 207 TLAD 210
           T  D
Sbjct: 309 TFVD 312



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ L  ++ D+G+  D + Y ++I G+     L  A  L  K+    L+ +   +T 
Sbjct: 565 LSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTC 624

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            I  FC    M +A  + S+M+  G   +   Y+CLI  Y K  NM+ A  +  EM
Sbjct: 625 FISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 46/86 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  L  A  L  ++ + GL+ D+  Y   I G+C++N + EA  +  ++    + P+ 
Sbjct: 595 MKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDK 654

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKM 88
             +  LI  + K G M++A+ + ++M
Sbjct: 655 TAYNCLIRKYQKLGNMEEASSLQNEM 680


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+  AL++   +   G +PDI TYN++I G C L  +DEAV++  ++      PN
Sbjct: 311 LSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPN 370

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  +I   CKE ++++AT +   +  KG   +V TY+ LI G   S+N   A ++Y+
Sbjct: 371 TVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYK 430

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+  +Y++LID LC RG ++EAL        +    +V+TY  LI G+CK  
Sbjct: 431 EMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNK 490

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA +++D M   G+  + +  +TL D
Sbjct: 491 RIAEAEEIFDQMELQGVSRNSVTYNTLID 519



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A KL   LT +G+ PD+ TYN++I G C       A++L++++      P+
Sbjct: 381 LCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPD 440

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LID+ C  G++ +A  +  +M   G   NV+TY+ LIDG+ K++ +  A ++++
Sbjct: 441 EFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFD 500

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +S N V+Y+ LIDGLCK   +EEA       +   L PD  TY  L+  +CKAG
Sbjct: 501 QMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAG 560

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  +  +M  +G  PD +   TL
Sbjct: 561 DIKKAADIVQTMASDGCEPDIVTYGTL 587



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 36/230 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L  ++   G   ++ITYNT+I G+C   R+ EA ++F+++    +  NS+T+  
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK  R+++A+ +  +M+ +G + +  TY+ L+  + K+ ++K A D+ + M  + 
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 128 ISPNIVSYSILIDGLCKRGLME-----------------------------------EAL 152
             P+IV+Y  LI GLCK G +E                                   EA+
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPT-EAMQLYDSMLRNGIMPD 201
             F   ++    PD VTY I+ RG C+ G P  EA+     ML  G +P+
Sbjct: 637 RLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 102/188 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L+ ++  +G  PD  TYN +I   C   +L EA+ L +++       N IT+  LID
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLID 484

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  R+ +A  +F +M  +G   N VTY+ LIDG  KS+ ++ A  + ++M    + P
Sbjct: 485 GFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRP 544

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ L+   CK G +++A         +   PD+VTY  LI G CKAGR   A +L 
Sbjct: 545 DKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLL 604

Query: 191 DSMLRNGI 198
            ++   GI
Sbjct: 605 RTIQMKGI 612



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKP 60
            I+E +LD A+++  Q+ + G     +T N ++ G+C   R++EA++  E+++  +   P
Sbjct: 240 FIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFP 299

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  TF +L++   K G +  A  +   ML +G   ++ TY+ LI G  K   +  A  V 
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M E + SPN V+Y+ +I  LCK   +EEA           +LPDV TY  LI+G C +
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              T AM+LY  M   G  PD    + L D
Sbjct: 420 RNHTVAMELYKEMKTKGCHPDEFTYNMLID 449



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A+ L  ++ D GL PD  T+ TI+ G+     LD A+++ E++        
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVT 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++T  +L++ FCKEGR+++A     +M L +G   +  T++ L++G  K+ ++K A +V 
Sbjct: 265 NVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM 324

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M      P+I +Y+ LI GLCK G ++EA+   +  ++    P+ VTY  +I   CK 
Sbjct: 325 DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKE 384

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  EA +L   +   GI+PD
Sbjct: 385 NQVEEATKLALVLTGKGILPD 405



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   GL PD  TYN+++  +C    + +A  + + +     +P+
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK GR++ AT +   +  KG       Y+ +I   F+ +  K A  ++ 
Sbjct: 581 IVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFR 640

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E   +P+ V+Y I+  GLC+  G + EA+      L+   +P+  ++ +L  G    
Sbjct: 641 EMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSL 700

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                 ++L D ++      D
Sbjct: 701 AMVGTLIKLIDMVMEKAKFSD 721



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 67  ILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + I+++   G  ++       M +E G  AN   Y+ L++       +K     +  M  
Sbjct: 129 VFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVS 188

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I P++ +++ILI  LC+   +  A+       D  LLPD  T+  +++G+ + G    
Sbjct: 189 RGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDG 248

Query: 186 AMQLYDSMLRNG 197
           AM++ + M+  G
Sbjct: 249 AMRVKEQMVEAG 260


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ AL    ++ D GL PD+ITYNT+I  +C    + +A  L +++    LK +
Sbjct: 390 LCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T   ++   CKE R ++A  +     ++G   + V+Y  ++  YFK  N + A  +++
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWD 509

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  ++P+I +Y+ LI GL + G ++EA+   +  ++  L+PD  TY I+I  YCK G
Sbjct: 510 EMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEG 569

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A Q ++ M+ N   PD +  +TL
Sbjct: 570 DLENAFQFHNKMVENSFKPDVVTCNTL 596



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 108/197 (54%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            KE + + AL+L+ ++ ++ L P I TYNT+I G   + RL EA+    +L    L P+ 
Sbjct: 496 FKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDD 555

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ I+I A+CKEG +++A    +KM+E   K +VVT + L++G   +  +  A  ++E 
Sbjct: 556 TTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFES 615

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E     ++++Y+ LI  +CK G ++ AL+ F       L PD  TY +++    +AGR
Sbjct: 616 WVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 675

Query: 183 PTEAMQLYDSMLRNGIM 199
             EA  +   +  +G +
Sbjct: 676 TEEAQNMLHKLAESGTL 692



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A  L      RG  PD ++Y T++  Y      + A++L++++   +L P+
Sbjct: 460 LCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPS 519

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI    + GR+ +A    ++++EKG   +  TY+ +I  Y K  ++++AF  + 
Sbjct: 520 ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHN 579

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M EN+  P++V+ + L++GLC  G +++AL  F   ++     DV+TY  LI+  CK G
Sbjct: 580 KMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDG 639

Query: 182 RPTEAMQLYDSMLRNGIMPDG----LLLSTLAD 210
               A+  +  M   G+ PD     ++LS L++
Sbjct: 640 DVDTALHFFADMEARGLQPDAFTYNVVLSALSE 672



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A+    +L ++GL PD  TYN II  YC    L+ A Q   K+     KP+ +T  
Sbjct: 535 RLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCN 594

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++  C  G++D A  +F   +EKG K +V+TY+ LI    K  ++ +A   + +M   
Sbjct: 595 TLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEAR 654

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----------PDVV-------- 168
            + P+  +Y++++  L + G  EEA    H   ++  L          P  V        
Sbjct: 655 GLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKD 714

Query: 169 -----------------TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
                             Y  L+ G C +G+  EA  + D M++ G+  D     TL + 
Sbjct: 715 AKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEG 774

Query: 212 NLQSSGSQEHCI 223
            ++      H +
Sbjct: 775 LVKRQKRLTHAV 786



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A+L  F  +    L P+  T+N ++  +CS   L +A+     +    L P+++T+  L+
Sbjct: 187 ASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLL 246

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +A C++G + +A  + ++M + G      TY+ L+  Y +   +K A  V E M  N   
Sbjct: 247 NAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFE 306

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDN--HLLPDVVTYAILIRGYCKAGRPTEAM 187
           P++ +Y++L  GLC+ G ++EA +     ++    LLPDVVTY  L     K    ++A+
Sbjct: 307 PDLWTYNVLAAGLCQAGKVDEA-FRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L + M   G+       +TL  +N+   G
Sbjct: 366 RLLEEMREKGVK------ATLVTHNIVIKG 389



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 8   LDAALKLFGQLTDRG-LEPDIITYNTI--ICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           +D A +L  ++   G L PD++TYNT+   C  C  +   +A++L E++    +K   +T
Sbjct: 325 VDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCS--SDALRLLEEMREKGVKATLVT 382

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
             I+I   CK+G ++ A    +KM + G   +V+TY+ LI  + K+ N+  A+ + +EM 
Sbjct: 383 HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              +  +  + + ++  LCK    EEA            +PD V+Y  ++  Y K     
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSE 502

Query: 185 EAMQLYDSMLRNGIMP 200
            A++L+D M+   + P
Sbjct: 503 PALRLWDEMIEKKLTP 518



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 48/99 (48%)

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           S + +++ D +  +    + PN  ++++L+   C +G + +AL          L PD VT
Sbjct: 182 STSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVT 241

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           Y  L+  +C+ G   EA  L   M ++G+ P     +TL
Sbjct: 242 YNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTL 280


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 170 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 229

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++  A  + +E
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDE 289

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  +I G C+ GR
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGR 349

Query: 183 PTEAMQLYDSMLRNGIMPD 201
           P +A ++   ML  G+ PD
Sbjct: 350 PVDAEKMLREMLSVGLKPD 368



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 8/202 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 136 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 195

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 255

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G + +A    H  +D      L PD  TY  LI G CK
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKKGDLNQA----HGLIDEMSMKGLKPDKFTYTTLIDGCCK 311

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G    A +    M++  I  D
Sbjct: 312 EGDLDAAFEHRKRMIQENIRLD 333



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 204 LCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 263

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G ++ A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 264 LITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRK 323

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ +I GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 324 RMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 383

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +  +L   M RNG +P
Sbjct: 384 DVWKGSKLLKEMQRNGHVP 402



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 99  LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 158

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 159 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 218

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 219 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 278

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 279 DLNQAHGLIDEMSMKGLKPDKFTYTTLID 307



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 56  VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 115

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 116 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 175

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  +L  +ML +G+ PD    S L
Sbjct: 176 DEGFRLKSAMLASGVQPDVYTYSVL 200


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 110/197 (55%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F Q  D    P+++TY  ++ G+C  +R++EA +L + ++    +PN I +  LID  CK
Sbjct: 586 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 645

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G++D+A  + ++M E G  A + TYS LID YFK +    A  V  +M EN+ +PN+V 
Sbjct: 646 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 705

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ +IDGLCK G  +EA        +    P+VVTY  +I G+   G+    ++L + M 
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765

Query: 195 RNGIMPDGLLLSTLADY 211
             G+ P+ +    L D+
Sbjct: 766 SKGVAPNYVTYRVLIDH 782



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 16/218 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +  ++  +G  PD  TY+ ++   C+ ++++ A  LFE++    L  +  T+TI+
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D+FCK G ++ A   F++M E G   NVVTY+ LI  Y K++ +  A +++E M     
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CAL--------------DNHLLPDVVTYAI 172
            PNIV+YS LIDG CK G +E+A   F   C                DN   P+VVTY  
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L+ G+CK+ R  EA +L D+M   G  P+ ++   L D
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 641



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   GL  D+ TY  ++  +C    +++A + F ++  V   PN +T+T 
Sbjct: 458 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 517

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           LI A+ K  ++  A  +F  ML +G   N+VTYS LIDG+ K+  ++ A  ++E MC   
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577

Query: 125 -------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
                        +N+  PN+V+Y  L+DG CK   +EEA             P+ + Y 
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G CK G+  EA ++   M  +G        S+L D
Sbjct: 638 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 676



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 2/199 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A ++  ++++ G    + TY+++I  Y  + R D A ++  K+      PN
Sbjct: 643 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 702

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T +ID  CK G+ D+A  +   M EKG + NVVTY+ +IDG+     +++  ++ E
Sbjct: 703 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 762

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN V+Y +LID  CK G ++ A          H       Y  +I G+ K  
Sbjct: 763 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-- 820

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              E++ L D + ++   P
Sbjct: 821 EFIESLGLLDEIGQDDTAP 839



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC----SLN--RLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++   G  P  + YN +I   C    SLN   LD A + + ++    +  N I 
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN 409

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +      C  G+ + A  +  +M+ +G   +  TYS +++    +  M+ AF ++EEM 
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              +  ++ +Y+I++D  CK GL+E+A   F+   +    P+VVTY  LI  Y KA + +
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 529

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L+++ML  G +P+ +  S L D + ++   ++ C
Sbjct: 530 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 104/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K + ++   G+  + I  ++     CS  + ++A  +  ++      P++ T++ 
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  C   +M+ A ++F +M   G  A+V TY+ ++D + K+  ++ A   + EM E  
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   +  A   F   L    LP++VTY+ LI G+CKAG+  +A 
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567

Query: 188 QLYDSMLRNGIMPD 201
           Q+++ M  +  +PD
Sbjct: 568 QIFERMCGSKDVPD 581



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL   + ++G +P+++TY  +I G+  + +++  ++L E++    + PN +T+ +L
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CK G +D A  +  +M +     +   Y  +I+G+  ++    +  + +E+ +++ 
Sbjct: 780 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 837

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +P +  Y +LID L K   +E AL            L+    TY  LI   C A +   A
Sbjct: 838 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 897

Query: 187 MQLYDSMLRNGIMPD 201
            QL+  M + G++P+
Sbjct: 898 FQLFSEMTKKGVIPE 912



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+  G+L D    P   TYN +I  +   +RLD A  +  +++   L+ +  T      
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK G+  +A  +      +    + V Y+ LI G  ++   + A D    M   +  P
Sbjct: 238 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L+ G   +  +       +  +     P    +  L+  YC +G  + A +L 
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354

Query: 191 DSMLRNGIMP 200
             M++ G MP
Sbjct: 355 KKMVKCGHMP 364



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 3/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++  +C       A++   +L   + +P+  T+  LI AF K  R+D A+++  +M  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
              + +  T  C      K    + A  + E     N  P+ V Y+ LI GLC+  L EE
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 279

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+   +       LP+VVTY+ L+ G     +     ++ + M+  G  P   + ++L
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 337



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + Y  +I G C  +  +EA+    ++      PN +T++ L+     + ++     +
Sbjct: 259 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 318

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC- 143
            + M+ +G   +   ++ L+  Y  S +   A+ + ++M +    P  V Y+ILI  +C 
Sbjct: 319 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 378

Query: 144 -----KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                   L++ A  A+   L   ++ + +  +   R  C AG+  +A  +   M+  G 
Sbjct: 379 DKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 438

Query: 199 MPDGLLLSTLADY 211
           +PD    S + +Y
Sbjct: 439 IPDTSTYSKVLNY 451



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 35/180 (19%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++  L+L  ++  +G+ P+ +TY  +I   C    LD A  L E++       ++  +  
Sbjct: 754 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 813

Query: 68  LIDAFCKE-----------GRMDDATM------------------MFSKMLEKGP--KAN 96
           +I+ F KE           G+ D A                    M  ++LE+     A 
Sbjct: 814 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 873

Query: 97  VV----TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           +V    TY+ LI+    +  +++AF ++ EM +  + P + S+  LI GL +   + EAL
Sbjct: 874 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 108/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+T  G +PD +TYN +I GY +L RL EA ++F K+    L PN
Sbjct: 310 LCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +     + + CK GR  +A  +F  M  KG K ++V+Y  L+ GY           ++ 
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFN 429

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I+ +   ++ILI    KRG++++A+  F       + PDVVTY+ +I  + + G
Sbjct: 430 SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R T+AM+ ++ M+  GI P+
Sbjct: 490 RLTDAMEKFNQMVARGIQPN 509



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 2/193 (1%)

Query: 11  ALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL LF  +   G    P+++ YNT+I G+       +A  LF ++T   +KP+ +T+ ++
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA CK   MD A ++  +M   G + + VTY+C+I GY     +K A  ++ +M    +
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGL 366

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PNIV  +  +  LCK G  +EA   F         PD+V+Y  L+ GY   G   + + 
Sbjct: 367 IPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG 426

Query: 189 LYDSMLRNGIMPD 201
           L++SM  NGI  D
Sbjct: 427 LFNSMKSNGIAAD 439



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 103/187 (55%), Gaps = 1/187 (0%)

Query: 8   LDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           L  A +L  ++ ++G+  PDI+ +N++I   C   R+ +A  +F+ +T +  +P+ ITFT
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +C  G+MD A  +   M   G + ++VTYS L+DGYFK+  +     ++ EM   
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN V+Y I++ GL + G    A   FH  +++     V  Y I++ G C+     EA
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 187 MQLYDSM 193
           + L+  +
Sbjct: 706 IILFQKL 712



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +F  +TD G  PD+IT+ ++I GYC + ++D+A ++ + +  V ++ +
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+D + K GR++D   +F +M  KG K N VTY  ++ G F++    +A   + 
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  +  +  Y I++ GLC+    +EA+  F      ++   +     +I    K  
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+ ++  +G++P+
Sbjct: 736 RKEEAKELFATISASGLLPN 755



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A ++F  +T +G +PDI++Y T++ GY S     + + LF  +    +  +
Sbjct: 380 LCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F ILI A+ K G +DDA ++F++M ++G   +VVTYS +I  + +   +  A + + 
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFN 499

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL-LPDVVTYAILIRGYCKA 180
           +M    I PN   Y  +I G C  G + +A       ++  +  PD+V +  +I   CK 
Sbjct: 500 QMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKD 559

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  +A  ++D +   G  PD +  ++L D
Sbjct: 560 GRVMDAHDIFDLVTDIGERPDVITFTSLID 589



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 3/196 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTI 67
           D  L LFG +   GL+   IT +T++   C  NR +EAV  L  +++ +   PN  +++I
Sbjct: 174 DLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSI 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           ++   C       A  +F  M ++G     NVV Y+ +I G+FK      A  ++ EM  
Sbjct: 234 ILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTR 293

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P++V+Y+++ID LCK   M++A         N   PD VTY  +I GY   GR  E
Sbjct: 294 QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKE 353

Query: 186 AMQLYDSMLRNGIMPD 201
           A +++  M   G++P+
Sbjct: 354 AAKMFRKMKSRGLIPN 369



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 2/190 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTILIDA 71
           L  ++++ G  P++ +Y+ I+ G C  +    A+ LF+ +        PN + +  +I  
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           F KEG    A  +F +M  +G K +VVTY+ +ID   K++ M  A  V  +M  N   P+
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            V+Y+ +I G    G ++EA   F       L+P++V     +   CK GR  EA +++D
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 192 SMLRNGIMPD 201
           SM   G  PD
Sbjct: 395 SMTAKGHKPD 404



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 105/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+   +   G+E DI+TY+T++ GY    R+++ + LF ++    +KPN++T+ I
Sbjct: 597 MDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    + GR   A   F +M+E G    V  Y  ++ G  ++     A  +++++   N
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I   + +I+ + K    EEA   F     + LLP+  TY ++I    K G   +A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN 776

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++ SM ++GI+P   LL+ +
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRI 797



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 46  AVQLFEKLTCVQLKPNSI-----TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           A+ LF ++   Q  P  +     T++IL+D  C+  R D   ++F  +L  G K + +T 
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195

Query: 101 SCLIDGYFKSQNMKSAFDVY-EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH--C 157
           S L+     +   + A +V    M E    PN+ SYSI++ GLC   + + AL  F    
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                  P+VV Y  +I G+ K G   +A  L+  M R G+ PD
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPD 299



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 87/188 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +     AA K F ++ + G    +  Y  I+ G C  N  DEA+ LF+KL  + +K +
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFS 720

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I+A  K  R ++A  +F+ +   G   N  TY  +I    K   ++ A +++ 
Sbjct: 721 ITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFS 780

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++ I P     + +I  L ++G + +A           +L +  T ++++  + + G
Sbjct: 781 SMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840

Query: 182 RPTEAMQL 189
           +  E M+L
Sbjct: 841 KYHEDMKL 848


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 110/197 (55%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F Q  D    P+++TY  ++ G+C  +R++EA +L + ++    +PN I +  LID  CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G++D+A  + ++M E G  A + TYS LID YFK +    A  V  +M EN+ +PN+V 
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ +IDGLCK G  +EA        +    P+VVTY  +I G+   G+    ++L + M 
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806

Query: 195 RNGIMPDGLLLSTLADY 211
             G+ P+ +    L D+
Sbjct: 807 SKGVAPNYVTYRVLIDH 823



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 16/218 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +  ++  +G  PD  TY+ ++   C+ ++++ A  LFE++    L  +  T+TI+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D+FCK G ++ A   F++M E G   NVVTY+ LI  Y K++ +  A +++E M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CAL--------------DNHLLPDVVTYAI 172
            PNIV+YS LIDG CK G +E+A   F   C                DN   P+VVTY  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L+ G+CK+ R  EA +L D+M   G  P+ ++   L D
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   GL  D+ TY  ++  +C    +++A + F ++  V   PN +T+T 
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           LI A+ K  ++  A  +F  ML +G   N+VTYS LIDG+ K+  ++ A  ++E MC   
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 125 -------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
                        +N+  PN+V+Y  L+DG CK   +EEA             P+ + Y 
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G CK G+  EA ++   M  +G        S+L D
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 2/199 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A ++  ++++ G    + TY+++I  Y  + R D A ++  K+      PN
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T +ID  CK G+ D+A  +   M EKG + NVVTY+ +IDG+     +++  ++ E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN V+Y +LID  CK G ++ A          H       Y  +I G+ K  
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-- 861

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              E++ L D + ++   P
Sbjct: 862 EFIESLGLLDEIGQDDTAP 880



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC----SLN--RLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++   G  P  + YN +I   C    SLN   LD A + + ++    +  N I 
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +      C  G+ + A  +  +M+ +G   +  TYS +++    +  M+ AF ++EEM 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              +  ++ +Y+I++D  CK GL+E+A   F+   +    P+VVTY  LI  Y KA + +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L+++ML  G +P+ +  S L D + ++   ++ C
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 104/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K + ++   G+  + I  ++     CS  + ++A  +  ++      P++ T++ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  C   +M+ A ++F +M   G  A+V TY+ ++D + K+  ++ A   + EM E  
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   +  A   F   L    LP++VTY+ LI G+CKAG+  +A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 188 QLYDSMLRNGIMPD 201
           Q+++ M  +  +PD
Sbjct: 609 QIFERMCGSKDVPD 622



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL   + ++G +P+++TY  +I G+  + +++  ++L E++    + PN +T+ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CK G +D A  +  +M +     +   Y  +I+G+  ++    +  + +E+ +++ 
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 878

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +P +  Y +LID L K   +E AL            L+    TY  LI   C A +   A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938

Query: 187 MQLYDSMLRNGIMPD 201
            QL+  M + G++P+
Sbjct: 939 FQLFSEMTKKGVIPE 953



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+  G+L D    P   TYN +I  +   +RLD A  +  +++   L+ +  T      
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK G+  +A  +      +    + V Y+ LI G  ++   + A D    M   +  P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L+ G   +  +       +  +     P    +  L+  YC +G  + A +L 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 191 DSMLRNGIMP 200
             M++ G MP
Sbjct: 396 KKMVKCGHMP 405



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 3/178 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++  +C       A++   +L   + +P+  T+  LI AF K  R+D A+++  +M  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
              + +  T  C      K    + A  + E     N  P+ V Y+ LI GLC+  L EE
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           A+   +       LP+VVTY+ L+ G     +     ++ + M+  G  P   + ++L
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + Y  +I G C  +  +EA+    ++      PN +T++ L+     + ++     +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + M+ +G   +   ++ L+  Y  S +   A+ + ++M +    P  V Y+ILI  +C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419

Query: 145 RG------LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                   L++ A  A+   L   ++ + +  +   R  C AG+  +A  +   M+  G 
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479

Query: 199 MPDGLLLSTLADY 211
           +PD    S + +Y
Sbjct: 480 IPDTSTYSKVLNY 492



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 35/180 (19%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++  L+L  ++  +G+ P+ +TY  +I   C    LD A  L E++       ++  +  
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 68  LIDAFCKE-----------GRMDDATM------------------MFSKMLEKGP--KAN 96
           +I+ F KE           G+ D A                    M  ++LE+     A 
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 97  VV----TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           +V    TY+ LI+    +  +++AF ++ EM +  + P + S+  LI GL +   + EAL
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 106/186 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ +  ++   G+ PD ITYN+I+ GYCS  +  EA+ + EK+    ++P+
Sbjct: 251 LCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPD 310

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T L+D  CK GR  +A  +   M+++G K NV+TYS L+ GY     +    D+ +
Sbjct: 311 AVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLD 370

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I P+   +SILI    K   ++ A++ F       L PDVVTY  LI G CK+G
Sbjct: 371 LMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSG 430

Query: 182 RPTEAM 187
           R  +AM
Sbjct: 431 RVDDAM 436



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           L  E     AL+L   + D G +  PD+++Y+TII G       D+A   + ++    + 
Sbjct: 179 LCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGIL 238

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ +T+  ++ A CK   MD A  + ++M++ G   + +TY+ ++ GY  S   K A  +
Sbjct: 239 PDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGI 298

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E+MC + + P+ V+Y+ L+D LCK G   EA       +   L P+V+TY+ L+ GY  
Sbjct: 299 LEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYAT 358

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   E   L D M+RNGI PD  + S L
Sbjct: 359 KGALVEMRDLLDLMVRNGIQPDRHVFSIL 387



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 3/208 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
            LD      G +  +G   + I +  ++   C+  R   A+ +   ++T +   P+  ++
Sbjct: 113 RLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSY 172

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            IL+   C E R  +A  +   M + G     +VV+YS +IDG FK  +   A+  Y EM
Sbjct: 173 NILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEM 232

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P++V+Y+ ++  LCK   M++A+   +  + N ++PD +TY  ++ GYC +G+ 
Sbjct: 233 LERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQS 292

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            EA+ + + M  +G+ PD +  ++L DY
Sbjct: 293 KEAIGILEKMCSDGVEPDAVTYTSLMDY 320



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 6/217 (2%)

Query: 10  AALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           AA+  F ++   +D  + P + TY  +I   C   RLD        +     +   I FT
Sbjct: 78  AAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFT 137

Query: 67  ILIDAFCKEGRMDDA-TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            L+ + C E R  +A  ++  +M E G   +V +Y+ L+ G       + A ++   M +
Sbjct: 138 PLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMAD 197

Query: 126 N--NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
           +  +  P++VSYS +IDGL K G  ++A   +H  L+  +LPDVVTY  ++   CKA   
Sbjct: 198 DGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAM 257

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +AM + + M++NG+MPD +  +++      S  S+E
Sbjct: 258 DKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKE 294



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G++PD   ++ +IC       +D A+ +F K+   +L P+ +T+  LID  CK GR+DDA
Sbjct: 376 GIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435

Query: 82  TM 83
            +
Sbjct: 436 ML 437


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +  AA+++F ++  +G+   ++TYN++I G CS  +++E V+L E++  + L PN I
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  ++  FCK+G M DA      M E+  + +VV Y+ LID Y +   M+ A  V E M
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISPN+ +Y+ LI G  + G    A        +  +  DVVTY +LI   C  G  
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L D M   G+ P+ L  +T+
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTI 480



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D A K F     R + PDI T+NT+I G C + +L +A  + + +    L P+
Sbjct: 166 LVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS 225

Query: 62  SITFTILIDAFCKEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             T+  LID +CK+G    M    M+  +M+E G     VT+  LI+GY K+ N  +A  
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+EEM +  I+ ++V+Y+ LI GLC  G +EE +       D  L P+ +T+  +++G+C
Sbjct: 286 VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFC 345

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K G   +A    D M    + PD ++ + L D
Sbjct: 346 KKGMMADANDWIDGMTERNVEPDVVIYNILID 377



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 3/195 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D  LK   ++ + G+ P  +T+  +I GYC  +    AV++FE++    +  + +T+ 
Sbjct: 247 HVDMLLK---EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++++   +  +M + G   N +T+ C++ G+ K   M  A D  + M E 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P++V Y+ILID   + G ME+A+          + P+V TY  LI G+ ++G    A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 187 MQLYDSMLRNGIMPD 201
             L D M   GI  D
Sbjct: 424 SGLLDEMKEKGIEAD 438



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P   + N ++ G     R+D A + F      ++ P+  TF  +I   C+ G++  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV---YEEMCENNISPNIVSYSILID 140
           +   +   G   +V TY+ LIDGY K     + + V    +EM E  ISP  V++ +LI+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK      A+  F       +   VVTY  LI G C  G+  E ++L + M   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 201 D 201
           +
Sbjct: 333 N 333



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 93/174 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +   +  +G+ P++ TYN +I G+        A  L +++    ++ + +T+ +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C +G +  A  +  +M E G + N +TY+ +I G+    N+KSA+++   M +  
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              N+V+Y++ I   C+ G M+EA    +  LD  L+P+ +TY  +  G  + G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P++ +   L+       R+D A   F   L +    ++ T++ +I G  +   ++ A D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL------DNHLLPDVVTYAI 172
           V +++    ++P++ +Y+ LIDG CK+G    A   +H  +      +  + P  VT+ +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           LI GYCK      A+++++ M + GI       +++  YN   SG
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIA------ASVVTYNSLISG 308



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  S + L+ GL     ++ A  AF  AL   + PD+ T+  +I G C+ G+  +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
              +   G+ P     ++L D   +  G+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGA 242



 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +++TYN  I  +C + ++DEA  L  ++    L PN IT+  + +   ++G   D
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 116/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A KL G+++   LEP++ITY T+I  YC    L++A+ +++++T   L P+ +T+T 
Sbjct: 68  LFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTC 127

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK G++++A  +F +M E G   N  +Y+ LID  FK  N+  AF +   M    
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++V Y+ L+DGL K G+   A   F   L+  L+P+ VTY+ LI G+CK G   +  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M    I P+ ++ S++ D
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVD 270



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 115/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  A++L   +   G  PDI+TYNT++ G+C +  L  A +L  +++ V L+PN I
Sbjct: 29  RNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVI 88

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LIDA+CK   ++DA  M+ +M  K    +VVTY+C+++G  KS  ++ A  V+ EM
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  SY+ LID L K G + EA       +   +  DVV Y  L+ G  KAG  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  ++  +L   ++P+ +  S L D
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALID 235



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 36/250 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL ++ ++T + L PD++TY  I+ G C   +++EA  +F ++  V + PN  ++  
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 68  LID----------AFCKEGRM-------------------------DDATMMFSKMLEKG 92
           LID          AF  +GRM                         ++A  MF  +LE+ 
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              N VTYS LIDG+ K  ++     + +EM E +I PN++ YS ++DG  K+GL+ EA+
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
                 +  ++LP+V  Y  LI GY KA +   A+ L+  M   G+  +  ++ +  + N
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN-N 341

Query: 213 LQSSGSQEHC 222
           L+ SG  E  
Sbjct: 342 LKRSGRMEEA 351



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 110/201 (54%), Gaps = 3/201 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A+ +  ++  R + P++  Y T+I GY   ++   A+ LF+++    L+ N+ 
Sbjct: 274 KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNF 333

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
                ++   + GRM++A  +F  M+ +G   + V Y+ ++DG+FK+     AF++ +EM
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E +   ++V+Y++LI+GL K G  E    +FH  +    L PD  T+  +I  YCK G 
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE--SFHTGMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
              A++L + M   G+ P+ +
Sbjct: 452 LGNALKLLNEMKSYGLKPNSI 472



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L  ALKL  ++   GL+P+ IT N ++   C+   +++ + L   +  +   P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 64  T-----------------------------------FTILIDAFCKEGRMDDATMMFSKM 88
           T                                   +  LI  FC+ G +  AT++F  M
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + KG  A+++TY+ LI GY  S ++K AF V+ +M    +SPN+ +Y+IL+ GL    L+
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +EA    +   +  L+P+  TY IL+ G+ K G   E ++LY  M+  G +P
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 100/181 (55%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +N +I GYC    +  AV+L E +      P+ +T+  L++ FCK G +  A  +  ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
               + NV+TY+ LID Y KSQ ++ A  +Y+EM   ++ P++V+Y+ +++GLCK G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA   F    +  ++P+  +YA LI    K G   EA  L   M+  GI  D ++ + L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 210 D 210
           D
Sbjct: 200 D 200



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  +F  L +  L P+ +TY+ +I G+C L  +++   L +++    + PN
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I ++ ++D + K+G +++A  +  KM+++    NV  Y  LIDGYFK+     A D+++
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N       ++ L + G MEEA   F   +   LLPD V Y  ++ G+ KAG
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 182 RPTEAMQLYDSM 193
           + ++A  +   M
Sbjct: 382 KESDAFNIAQEM 393



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 90/180 (50%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL PD  T+NT+I  YC    L  A++L  ++    LKPNSIT  IL+   C  G ++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + ML  G      T+  ++D   KS+       +++++    +  ++ +Y+ LI  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C+ G++  A   F   +   +L D++TY  LI GYC +    +A  ++  ML  G+ P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 98/198 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D  L +  QL   G++ D+ TYNT+I  +C L  +  A  +F+ +    +  + I
Sbjct: 518 KSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADII 577

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +C    +  A  + S+ML +G   NV TY+ L+ G   ++ +K A  +  +M
Sbjct: 578 TYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  +Y IL+ G  K G M+E +  +   +    +P   TY +LI  + K  + 
Sbjct: 638 KERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKM 697

Query: 184 TEAMQLYDSMLRNGIMPD 201
           ++A +L   M   GI P+
Sbjct: 698 SQAKELMQEMQVRGIPPN 715



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A  +  Q+   G+ P++ TYN ++ G  +   + EA  L  ++    L PN+ T+ 
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYD 650

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+    K G M +   ++ +M+ KG      TY+ LI  + K + M  A ++ +EM   
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710

Query: 127 NISPNIVSYSILIDGL------------CKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            I PN  +Y ILI G              KR    EA   F    +   +P   T A + 
Sbjct: 711 GIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACIS 770

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGI 198
               K G+  +A ++ + + +  +
Sbjct: 771 FTLAKPGKKADAQRILNKLYKKKV 794



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 34/225 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++  RGLE +    ++ +       R++EA +LF+ +    L P+ + +T ++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK--------------------- 109
            F K G+  DA  +  +M EK    +VV Y+ LI+G FK                     
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPD 435

Query: 110 -------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
                          N+ +A  +  EM    + PN ++ +IL+  LC  G +E+ +   +
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L     P   T+  ++    K+ R    + ++D ++  G+  D
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLD 540



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 35/152 (23%)

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG------- 146
           + +V  ++ LIDGY ++  +  A ++ E M     +P+IV+Y+ L++G CK G       
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 147 ----------------------------LMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
                                        +E+ALY +       L+PDVVTY  ++ G C
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K+G+  EA  ++  M   G++P+    +TL D
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLID 165



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 41/83 (49%)

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++  +++LIDG C+ G +  A+            PD+VTY  L+ G+CK G    A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +    + P+ +  +TL D
Sbjct: 73  KLMGEISLVNLEPNVITYTTLID 95


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 114/200 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+ F  + + G+ P I T N II  +C   R++EA+ L  ++    + PN  T+  +I+
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKE + + A  +F  ML++    +VV YS LIDG+ K  N + A  +Y  M +  ++P
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ILI+ LC R  M EA   F    +N + PD ++Y  +I G+C+ G   +A  L+
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF 663

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           + ML+ G +P  +  ++L D
Sbjct: 664 NEMLQRGHLPTVVTYTSLVD 683



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  ++ AL L  ++  +G+ P++ TYN +I   C   + + A++LF  +    + P+ +
Sbjct: 512 REGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVV 571

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K+     A M++++ML+ G   ++V Y+ LI+       M  A++++++M
Sbjct: 572 VYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN ++P+ +SY+ +I G C+ G M +A   F+  L    LP VVTY  L+ GYCK  R 
Sbjct: 632 TENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRI 691

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A  L D M R GI PD
Sbjct: 692 DIADMLIDEMKRKGITPD 709



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 114/202 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + AL+LF  +  R + P ++ Y+T+I G+   +   +A+ L+ ++  + + P+
Sbjct: 545 LCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TILI+  C   RM +A  +F KM E G   + ++Y+ +I G+ +  +M+ A+ ++ 
Sbjct: 605 MVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFN 664

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    P +V+Y+ L+DG CK   ++ A           + PDVVTY +LI  + + G
Sbjct: 665 EMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRG 724

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              +A+++ + M  NG++PD +
Sbjct: 725 NLDKALEMLNEMKENGVLPDHM 746



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD ALK+  ++   G+ PD+ TY+ +I G+C    +++ + L E++    ++P+
Sbjct: 335 LCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPS 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++++ L    CK+   D +  +F  +   G K +   YS LI G+    ++ SA  + E
Sbjct: 395 LVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLME 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  NN++P+  ++  L+ G CK GL   AL  F+  L+  +LP + T  ++I  +C+ G
Sbjct: 455 EMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREG 514

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA+ L + M   GI P+
Sbjct: 515 RVEEALNLMNEMQTQGIFPN 534



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 107/196 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A KL  ++    L PD   + +++ G+C +     A++ F  +    + P+  T  +
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +IDA C+EGR+++A  + ++M  +G   N+ TY+ +I+   K +  + A +++  M + N
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V YS LIDG  K+   ++AL  +   L   + PD+V Y ILI   C   R  EA 
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 188 QLYDSMLRNGIMPDGL 203
            L+  M  NG+ PD +
Sbjct: 626 NLFKKMTENGMTPDKI 641



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 101/193 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D +L +F  L   G + D   Y+ +I G+C    LD A +L E++    L P+   F  L
Sbjct: 412 DISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  FCK G   +A   F+ MLE G   ++ T + +ID + +   ++ A ++  EM    I
Sbjct: 472 VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+ +Y+ +I+ LCK    E AL  F   L  ++LP VV Y+ LI G+ K     +A+ 
Sbjct: 532 FPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALM 591

Query: 189 LYDSMLRNGIMPD 201
           LY  ML+ G+ PD
Sbjct: 592 LYARMLKIGVTPD 604



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 103/170 (60%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +   AL L+ ++   G+ PD++ Y  +I   C  +R+ EA  LF+K+T   + P+ I
Sbjct: 582 KQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKI 641

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T +I  FC+ G M  A  +F++ML++G    VVTY+ L+DGY K   +  A  + +EM
Sbjct: 642 SYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEM 701

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
               I+P++V+Y++LI    +RG +++AL   +   +N +LPD +TY +L
Sbjct: 702 KRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 14/221 (6%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++  ++   G  P ++TY+T I G C +  ++ A+     L       N   +  +I 
Sbjct: 274 ATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIH 333

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G +D+A  +  +M   G   +V TYS LI G+ K  +++    + EEM  +N+ P
Sbjct: 334 GLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEP 393

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++VSYS L  GLCK+ L + +L  F          D   Y+ILI+G+C  G    A +L 
Sbjct: 394 SLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLM 453

Query: 191 DSMLRNGIMPD--------------GLLLSTLADYNLQSSG 217
           + M+RN + PD              GL ++ L  +N+   G
Sbjct: 454 EEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG 494



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 109/217 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++  L L  ++    +EP +++Y+++  G C     D ++ +F  L     K +  
Sbjct: 372 KQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQT 431

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ILI  FC +G +D A  +  +M+      +   +  L+ G+ K     +A + +  M
Sbjct: 432 AYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMM 491

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P+I + +++ID  C+ G +EEAL   +      + P++ TY  +I   CK  + 
Sbjct: 492 LEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKS 551

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             A++L+  ML+  ++P  ++ STL D   + S SQ+
Sbjct: 552 ERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 6/207 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ +F Q    GLE    + N ++      NR +    LFE++      PN  T+TI
Sbjct: 195 LENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTI 254

Query: 68  LIDAFCK----EGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +++ +CK    E  +D   AT +  +M   G    VVTYS  I G  +   ++SA D   
Sbjct: 255 MMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVR 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +   N   N+  Y+ +I GLCK+G ++EAL          + PDV TY+ILI G+CK G
Sbjct: 315 SLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQG 374

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + + L + M  + + P  +  S+L
Sbjct: 375 DVEKGLYLIEEMKYSNMEPSLVSYSSL 401



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 10/190 (5%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLF--EKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           +I ++ +I  + + + L+ AV +F   K T ++L   S  F  L+    +  R +    +
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNF--LLKCLAEANRREFLRSL 236

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQ------NMKSAFDVYEEMCENNISPNIVSYSIL 138
           F +M   GP  NV TY+ +++ Y K        + + A ++ EEM  N  SP +V+YS  
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I GLC+ G +E AL      +  + L +V  Y  +I G CK G   EA+++ + M   GI
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356

Query: 199 MPDGLLLSTL 208
            PD    S L
Sbjct: 357 SPDVYTYSIL 366


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 110/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +L G +   G+ PD+ T++ +I G C   RLDE   LF+++    L PN +
Sbjct: 295 KSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGV 354

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LID  CK G++D A   F  ML +G + ++VTY+ LI+G  K  ++K A  +  EM
Sbjct: 355 TFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 414

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+ ++++ LIDG CK G ME AL      ++  +  D V +  LI G C+ GR 
Sbjct: 415 TASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRV 474

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A ++   ML  G  PD
Sbjct: 475 HDAGRMLTDMLSAGFKPD 492



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 110/195 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++  RGL P ++++NT+I G C    ++E  +L   +    + P+  TF+ LI+  C
Sbjct: 270 VFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLC 329

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           KEGR+D+ +++F +M  +G   N VT++ LIDG  K   +  A   ++ M    + P++V
Sbjct: 330 KEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLV 389

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ LI+GLCK G ++EA    +    + L PD +T+  LI G CK G    A+++   M
Sbjct: 390 TYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM 449

Query: 194 LRNGIMPDGLLLSTL 208
           +  GI  D +  + L
Sbjct: 450 VEEGIELDDVAFTAL 464



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 111/208 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   ++ +  L+ ++ D G  P I  +N ++ G+C    +  A  +F+++    L+P  
Sbjct: 224 LRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTV 283

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           ++F  LI   CK G +++   +   M  +G   +V T+S LI+G  K   +     +++E
Sbjct: 284 VSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDE 343

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           MC   + PN V+++ LIDG CK G ++ AL  F   L   + PD+VTY  LI G CK G 
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +L + M  +G+ PD +  +TL D
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLID 431



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 40/253 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK F  +  +G+ PD++TYN +I G C +  L EA +L  ++T   LKP+ I
Sbjct: 365 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKI 424

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
           TFT LID                                     C+EGR+ DA  M + M
Sbjct: 425 TFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM 484

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L  G K +  TY+ +ID + K  ++K  F + +EM  +   P +V+Y+ L++GLCK+G M
Sbjct: 485 LSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQM 544

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A       L+  + P+ +TY IL+ G+ K G   + + +++S    G++ D    S  
Sbjct: 545 KNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNS--EKGLVTD--YASYT 599

Query: 209 ADYNLQSSGSQEH 221
           A  N  S  S++H
Sbjct: 600 ALVNESSKTSKDH 612



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 107/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD    LF ++  RGL P+ +T+ T+I G C   ++D A++ F+ +    ++P+
Sbjct: 328 LCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPD 387

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK G + +A  + ++M   G K + +T++ LIDG  K  +M+SA ++  
Sbjct: 388 LVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKR 447

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I  + V+++ LI GLC+ G + +A       L     PD  TY ++I  +CK G
Sbjct: 448 RMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKG 507

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  +G +P
Sbjct: 508 DVKMGFKLLKEMQSDGHVP 526



 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 79  DDATMMFSKMLEKGPKANV------VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           + A+ +FS +L   P+ +       + +  LI  Y  S     A   +  + +N     I
Sbjct: 152 NSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPI 211

Query: 133 VSYSILIDGLCK-RGLMEEALYAFHC-ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
                L+  + + R +  E  +A +   LD+   P +  + +L+ G+CKAG    A  ++
Sbjct: 212 RGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVF 271

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D + + G+ P  +  +TL
Sbjct: 272 DEIPKRGLRPTVVSFNTL 289


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 112/194 (57%), Gaps = 1/194 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +LF  +  RG  P+ +TYN ++ G C  ++ DEA +LF K+      P+ +T+T L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  FC  G+++ A  +F +M+ KG   +VV Y+CL+ G+F++     A  +++ M     
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAM 187
            P+ VS++I+IDGL K   +++A+  F     +H   PD+VTY  LI G C   R +EAM
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 188 QLYDSMLRNGIMPD 201
           +++  + R  + PD
Sbjct: 749 KVFKEIDRLKLSPD 762



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 107/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A KL+ Q+ D    P++ TYN  + G     R+ +A  ++E++      P+ IT++
Sbjct: 497 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYS 556

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F    + D A  +F  M+ +G + N VTY+CL+ G  K      A +++ +M E 
Sbjct: 557 TLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+Y+ L+ G C  G +E+A+  F   +     PDVV Y  L++G+ +AG+P EA
Sbjct: 617 GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 676

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            QL+  M+     PD +  + + D
Sbjct: 677 KQLFQVMVSRQCKPDTVSHNIMID 700



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 119/208 (57%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++  +  A  ++ ++   G  PD+ITY+T+I G+    + D+A +LFE +     +PN
Sbjct: 527 LMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPN 586

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+   CKE + D+A  +F KM+E+G   + VTY+ L+ G+     ++ A +V++
Sbjct: 587 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFD 646

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P++V+Y+ L+ G  + G   EA   F   +     PD V++ I+I G  KA 
Sbjct: 647 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAK 706

Query: 182 RPTEAMQLYDSMLRN-GIMPDGLLLSTL 208
           R  +A+++++ M ++ G  PD +  ++L
Sbjct: 707 RLDDAVEVFERMEQDHGCSPDLVTYNSL 734



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +  A  +F  + ++R   PD+++Y+ +I G+C ++ L  A +L++++  +   P
Sbjct: 456 LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+   ++   ++GR+ DA  ++ +M+  G   +V+TYS LI G+  ++    A +++
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M      PN V+Y+ L+ GLCK    +EA   F   ++    PD VTY  L+ G+C  
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV 635

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+  +A++++D M+  G  PD
Sbjct: 636 GKIEQAVEVFDEMVSKGHDPD 656



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 1/180 (0%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           YN+++   C   ++ +A  +F  +   +   P+ ++++ILID FCK   +  A  ++ +M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           ++     NV TY+  ++G  +   +  A  VYEEM     SP++++YS LI G       
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A   F   +     P+ VTY  L+ G CK  +P EA +L+  M+  G  PD +  +TL
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 4/225 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI+   +D A +   ++  R ++P   T +++I   C   R+D A+ L E +      P
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCP 407

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEK--GPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +  T ++LI+  CK  ++ +A      M  K     ++  +Y+ L++   K++ +  AF 
Sbjct: 408 DMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFA 467

Query: 119 VYEEMC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           ++  M  E +  P++VSYSILIDG CK   +  A   +   +D + +P+V TY   + G 
Sbjct: 468 IFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGL 527

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL-ADYNLQSSGSQEH 221
            + GR  +A  +Y+ M+  G  PD +  STL   ++L     Q H
Sbjct: 528 MRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAH 572



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 82/136 (60%), Gaps = 1/136 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+++F ++  +G +PD++ YN ++ G+    +  EA QLF+ +   Q KP++++  I
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNI 697

Query: 68  LIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +ID   K  R+DDA  +F +M  + G   ++VTY+ LI G    Q +  A  V++E+   
Sbjct: 698 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 757

Query: 127 NISPNIVSYSILIDGL 142
            +SP+  ++++L++ +
Sbjct: 758 KLSPDPHAFNVLLEAI 773



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 2/187 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP-NSITFTILI 69
           A KLF  +   G +PD   Y+ ++  +C L  LDEA +LF ++      P N++ +T  +
Sbjct: 253 ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFL 312

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              CK G+++ A      M E    +  V Y  LI    +S  +  A +   E+   NI 
Sbjct: 313 SGLCKSGKIEQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEACLEIAGRNIQ 371

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  +   +I  LCK G ++ AL      +     PD+ T+++LI   CKA +  EA + 
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 190 YDSMLRN 196
              M R 
Sbjct: 432 LQGMDRK 438



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 70/270 (25%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+   L  A ++F ++  +G+ P+  TY  ++   C     DEAV+ F ++     KP+
Sbjct: 139 LIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPS 198

Query: 62  SITF---TILIDAFCKEGRMD--------------------------------DATMMFS 86
           S  +   T  + A  KEG                                   +A+ +F 
Sbjct: 199 STLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFR 258

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP-NIVSYSILIDGLCKR 145
            M++ G K +   YS ++  + K +N+  AF ++ EM   + +P N V+++  + GLCK 
Sbjct: 259 AMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKS 318

Query: 146 GLMEEALYAFHCALDN----------------------------------HLLPDVVTYA 171
           G +E+A  A     ++                                  ++ P   T  
Sbjct: 319 GKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCH 378

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +I+  CKAGR   A+ L ++M++ G  PD
Sbjct: 379 SVIQELCKAGRVDSALSLLETMIKRGYCPD 408



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 2/191 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F  L  R  + D+ TYN ++        L +A Q+FEK+    + PN  T+ +L+ 
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCENNIS 129
           + C E   D+A   F +M++KG K +   Y  + +   K+   +  F  V+    E  ++
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE-CLKATGKEGEFSRVFGRDLEKRVA 231

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
             ++    L+     +    EA   F   + +   PD   Y+ ++  +CK     EA +L
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 190 YDSMLRNGIMP 200
           +  M      P
Sbjct: 292 FLEMAVESKAP 302



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 69/162 (42%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           EA+  F  L     K +  T+  L+D   +   +  A  +F KM+ +G   N  TY+ L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
                 +N   A   + EM +    P+   Y  + + L   G   E    F   L+  + 
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++    L+  +    +  EA +L+ +M+++G  PD  + S
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYS 273



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   LD A+++F ++  D G  PD++TYN++I G C   RL EA+++F+++  ++L P
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761

Query: 61  NSITFTILIDA 71
           +   F +L++A
Sbjct: 762 DPHAFNVLLEA 772



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 58/129 (44%)

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A   F  +  +  K +V TY+CL+D   + +++K A  V+E+M    + PN  +Y++L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
              C     +EA+  F   +D    P    Y  +       G+  E  +++   L   + 
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 200 PDGLLLSTL 208
            + +L   L
Sbjct: 232 VEMMLKKAL 240



 Score = 43.1 bits (100), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A   +  +   N   ++ +Y+ L+D L +   +++A   F   +   ++P+  TYA+L++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
             C      EA++ +  M+  G  P   L   + +  L+++G +
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTEC-LKATGKE 215


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 116/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A KL G+++   LEP++ITY T+I  YC    L++A+ +++++T   L P+ +T+T 
Sbjct: 68  LFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTC 127

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK G++++A  +F +M E G   N  +Y+ LID  FK  N+  AF +   M    
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++V Y+ L+DGL K G+   A   F   L+  L+P+ VTY+ LI G+CK G   +  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M    I P+ ++ S++ D
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVD 270



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 115/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  A++L   +   G  PDI+TYNT++ G+C +  L  A +L  +++ V L+PN I
Sbjct: 29  RNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVI 88

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LIDA+CK   ++DA  M+ +M  K    +VVTY+C+++G  KS  ++ A  V+ EM
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  SY+ LID L K G + EA       +   +  DVV Y  L+ G  KAG  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  ++  +L   ++P+ +  S L D
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALID 235



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 36/250 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL ++ ++T + L PD++TY  I+ G C   +++EA  +F ++  V + PN  ++  
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 68  LIDAFCKEG----------RM-------------------------DDATMMFSKMLEKG 92
           LID+  KEG          RM                         ++A  MF  +LE+ 
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              N VTYS LIDG+ K  ++     + +EM E +I PN++ YS ++DG  K+GL+ EA+
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
                 +  ++LP+V  Y  LI GY KA +   A+ L+  M   G+  +  ++ +  + N
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN-N 341

Query: 213 LQSSGSQEHC 222
           L+ SG  E  
Sbjct: 342 LKRSGRMEEA 351



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 110/201 (54%), Gaps = 3/201 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A+ +  ++  R + P++  Y T+I GY   ++   A+ LF+++    L+ N+ 
Sbjct: 274 KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNF 333

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
                ++   + GRM++A  +F  M+ +G   + V Y+ ++DG+FK+     AF++ +EM
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E +   ++V+Y++LI+GL K G  E    +FH  +    L PD  T+  +I  YCK G 
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE--SFHTGMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
              A++L + M   G+ P+ +
Sbjct: 452 LGNALKLLNEMKSYGLKPNSI 472



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L  ALKL  ++   GL+P+ IT N ++   C+   +++ + L   +  +   P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 64  T-----------------------------------FTILIDAFCKEGRMDDATMMFSKM 88
           T                                   +  LI  FC+ G +  AT++F  M
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + KG  A+++TY+ LI GY  S ++K AF V+ +M    +SPN+ +Y+IL+ GL    L+
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +EA    +   +  L+P+  TY IL+ G+ K G   E ++LY  M+  G +P
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 100/181 (55%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +N +I GYC    +  AV+L E +      P+ +T+  L++ FCK G +  A  +  ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
               + NV+TY+ LID Y KSQ ++ A  +Y+EM   ++ P++V+Y+ +++GLCK G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA   F    +  ++P+  +YA LI    K G   EA  L   M+  GI  D ++ + L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 210 D 210
           D
Sbjct: 200 D 200



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  +F  L +  L P+ +TY+ +I G+C L  +++   L +++    + PN
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I ++ ++D + K+G +++A  +  KM+++    NV  Y  LIDGYFK+     A D+++
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N       ++ L + G MEEA   F   +   LLPD V Y  ++ G+ KAG
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 182 RPTEAMQLYDSM 193
           + ++A  +   M
Sbjct: 382 KESDAFNIAQEM 393



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 90/180 (50%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL PD  T+NT+I  YC    L  A++L  ++    LKPNSIT  IL+   C  G ++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + ML  G      T+  ++D   KS+       +++++    +  ++ +Y+ LI  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C+ G++  A   F   +   +L D++TY  LI GYC +    +A  ++  ML  G+ P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 98/198 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D  L +  QL   G++ D+ TYNT+I  +C L  +  A  +F+ +    +  + I
Sbjct: 518 KSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADII 577

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +C    +  A  + S+ML +G   NV TY+ L+ G   ++ +K A  +  +M
Sbjct: 578 TYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  +Y IL+ G  K G M+E +  +   +    +P   TY +LI  + K  + 
Sbjct: 638 KERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKM 697

Query: 184 TEAMQLYDSMLRNGIMPD 201
           ++A +L   M   GI P+
Sbjct: 698 SQAKELMQEMQVRGIPPN 715



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 12/201 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A  +  Q+   G+ P++ TYN ++ G  +   + EA  L  ++    L PN+ T+ 
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYD 650

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+    K G M +   ++ +M+ KG      TY+ LI  + K + M  A ++ +EM   
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710

Query: 127 NISPNIVSYSILIDGL------------CKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            I PN  +Y ILI G              KR    EA   F    +   +P   T A + 
Sbjct: 711 GIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACIS 770

Query: 175 RGYCKAGRPTEAMQLYDSMLR 195
               K G+  +A ++ + + +
Sbjct: 771 FTLAKPGKKADAQRILNKLYK 791



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 34/225 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++  RGLE +    ++ +       R++EA +LF+ +    L P+ + +T ++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK--------------------- 109
            F K G+  DA  +  +M EK    +VV Y+ LI+G FK                     
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPD 435

Query: 110 -------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
                          N+ +A  +  EM    + PN ++ +IL+  LC  G +E+ +   +
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L     P   T+  ++    K+ R    + ++D ++  G+  D
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLD 540



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 35/152 (23%)

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG------- 146
           + +V  ++ LIDGY ++  +  A ++ E M     +P+IV+Y+ L++G CK G       
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 147 ----------------------------LMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
                                        +E+ALY +       L+PDVVTY  ++ G C
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K+G+  EA  ++  M   G++P+    +TL D
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLID 165



 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 41/83 (49%)

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++  +++LIDG C+ G +  A+            PD+VTY  L+ G+CK G    A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +    + P+ +  +TL D
Sbjct: 73  KLMGEISLVNLEPNVITYTTLID 95


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 110/197 (55%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F Q  D    P+++TY  ++ G+C  +R++EA +L + ++    +PN I +  LID  CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G++D+A  + ++M E G  A + TYS LID YFK +    A  V  +M EN+ +PN+V 
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ +IDGLCK G  +EA        +    P+VVTY  +I G+   G+    ++L + M 
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806

Query: 195 RNGIMPDGLLLSTLADY 211
             G+ P+ +    L D+
Sbjct: 807 SKGVAPNYVTYRVLIDH 823



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 16/218 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +  ++  +G  PD  TY+ ++   C+ ++++ A  LFE++    L  +  T+TI+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D+FCK G ++ A   F++M E G   NVVTY+ LI  Y K++ +  A +++E M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CAL--------------DNHLLPDVVTYAI 172
            PNIV+YS LIDG CK G +E+A   F   C                DN   P+VVTY  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L+ G+CK+ R  EA +L D+M   G  P+ ++   L D
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   GL  D+ TY  ++  +C    +++A + F ++  V   PN +T+T 
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           LI A+ K  ++  A  +F  ML +G   N+VTYS LIDG+ K+  ++ A  ++E MC   
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 125 -------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
                        +N+  PN+V+Y  L+DG CK   +EEA             P+ + Y 
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G CK G+  EA ++   M  +G        S+L D
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 2/199 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A ++  ++++ G    + TY+++I  Y  + R D A ++  K+      PN
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T +ID  CK G+ D+A  +   M EKG + NVVTY+ +IDG+     +++  ++ E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN V+Y +LID  CK G ++ A          H       Y  +I G+ K  
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              E++ L D + ++   P
Sbjct: 864 --IESLGLLDEIGQDDTAP 880



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC----SLN--RLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++   G  P  + YN +I   C    SLN   LD A + + ++    +  N I 
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +      C  G+ + A  +  +M+ +G   +  TYS +++    +  M+ AF ++EEM 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              +  ++ +Y+I++D  CK GL+E+A   F+   +    P+VVTY  LI  Y KA + +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L+++ML  G +P+ +  S L D + ++   ++ C
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 104/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K + ++   G+  + I  ++     CS  + ++A  +  ++      P++ T++ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  C   +M+ A ++F +M   G  A+V TY+ ++D + K+  ++ A   + EM E  
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   +  A   F   L    LP++VTY+ LI G+CKAG+  +A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 188 QLYDSMLRNGIMPD 201
           Q+++ M  +  +PD
Sbjct: 609 QIFERMCGSKDVPD 622



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL   + ++G +P+++TY  +I G+  + +++  ++L E++    + PN +T+ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CK G +D A  +  +M +     +   Y  +I+G+  ++    +  + +E+ +++ 
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 878

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +P +  Y +LID L K   +E AL            L+    TY  LI   C A +   A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938

Query: 187 MQLYDSMLRNGIMPD 201
            QL+  M + G++P+
Sbjct: 939 FQLFSEMTKKGVIPE 953



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+  G+L D    P   TYN +I  +   +RLD A  +  +++   L+ +  T      
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK G+  +A  +      +    + V Y+ LI G  ++   + A D    M   +  P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L+ G   +  +       +  +     P    +  L+  YC +G  + A +L 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 191 DSMLRNGIMP 200
             M++ G MP
Sbjct: 396 KKMVKCGHMP 405



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 3/179 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++  +C       A++   +L   + +P+  T+  LI AF K  R+D A+++  +M  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
              + +  T  C      K    + A  + E     N  P+ V Y+ LI GLC+  L EE
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           A+   +       LP+VVTY+ L+ G     +     ++ + M+  G  P   + ++L 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + Y  +I G C  +  +EA+    ++      PN +T++ L+     + ++     +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + M+ +G   +   ++ L+  Y  S +   A+ + ++M +    P  V Y+ILI  +C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419

Query: 145 RG------LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                   L++ A  A+   L   ++ + +  +   R  C AG+  +A  +   M+  G 
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479

Query: 199 MPDGLLLSTLADY 211
           +PD    S + +Y
Sbjct: 480 IPDTSTYSKVLNY 492



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 35/180 (19%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++  L+L  ++  +G+ P+ +TY  +I   C    LD A  L E++       ++  +  
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 68  LIDAFCKE-----------GRMDDATM------------------MFSKMLEKGP--KAN 96
           +I+ F KE           G+ D A                    M  ++LE+     A 
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 97  VV----TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           +V    TY+ LI+    +  +++AF ++ EM +  + P + S+  LI GL +   + EAL
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 116/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A KL G+++   LEP++ITY T+I  YC    L++A+ +++++T   L P+ +T+T 
Sbjct: 68  LFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTC 127

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK G++++A  +F +M E G   N  +Y+ LID  FK  N+  AF +   M    
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++V Y+ L+DGL K G+   A   F   L+  L+P+ VTY+ LI G+CK G   +  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M    I P+ ++ S++ D
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIVD 270



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 115/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   +  A++L   +   G  PDI+TYNT++ G+C +  L  A +L  +++ V L+PN I
Sbjct: 29  RNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVI 88

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LIDA+CK   ++DA  M+ +M  K    +VVTY+C+++G  KS  ++ A  V+ EM
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  SY+ LID L K G + EA       +   +  DVV Y  L+ G  KAG  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  ++  +L   ++P+ +  S L D
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALID 235



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 36/250 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL ++ ++T + L PD++TY  I+ G C   +++EA  +F ++  V + PN  ++  
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 68  LID----------AFCKEGRM-------------------------DDATMMFSKMLEKG 92
           LID          AF  +GRM                         ++A  MF  +LE+ 
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              N VTYS LIDG+ K  ++     + +EM E +I PN++ YS ++DG  K+GL+ EA+
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
                 +  ++LP+V  Y  LI GY KA +   A+ L+  M   G+  +  ++ +  + N
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN-N 341

Query: 213 LQSSGSQEHC 222
           L+ SG  E  
Sbjct: 342 LKRSGRMEEA 351



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 110/201 (54%), Gaps = 3/201 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A+ +  ++  R + P++  Y T+I GY   ++   A+ LF+++    L+ N+ 
Sbjct: 274 KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNF 333

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
                ++   + GRM++A  +F  M+ +G   + V Y+ ++DG+FK+     AF++ +EM
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGR 182
            E +   ++V+Y++LI+GL K G  E    +FH  +    L PD  T+  +I  YCK G 
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE--SFHTGMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
              A++L + M   G+ P+ +
Sbjct: 452 LGNALKLLNEMKSYGLKPNSI 472



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE +L  ALKL  ++   GL+P+ IT N ++   C+   +++ + L   +  +   P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 64  T-----------------------------------FTILIDAFCKEGRMDDATMMFSKM 88
           T                                   +  LI  FC+ G +  AT++F  M
Sbjct: 508 THKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           + KG  A+++TY+ LI GY  S ++K AF V+ +M    +SPN+ +Y+IL+ GL    L+
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +EA    +   +  L+P+  TY IL+ G+ K G   E ++LY  M+  G +P
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 100/181 (55%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +N +I GYC    +  AV+L E +      P+ +T+  L++ FCK G +  A  +  ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
               + NV+TY+ LID Y KSQ ++ A  +Y+EM   ++ P++V+Y+ +++GLCK G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA   F    +  ++P+  +YA LI    K G   EA  L   M+  GI  D ++ + L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 210 D 210
           D
Sbjct: 200 D 200



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  +F  L +  L P+ +TY+ +I G+C L  +++   L +++    + PN
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I ++ ++D + K+G +++A  +  KM+++    NV  Y  LIDGYFK+     A D+++
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N       ++ L + G MEEA   F   +   LLPD V Y  ++ G+ KAG
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 182 RPTEAMQLYDSM 193
           + ++A  +   M
Sbjct: 382 KESDAFNIAQEM 393



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 89/180 (49%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL PD  T+NT+I  YC    L  A++L  ++    LKPNSIT  IL+   C  G ++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + + ML  G      T+  ++D   KS+        ++++    +  ++ +Y+ LI  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIST 550

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C+ G++  A   F   +   +L D++TY  LI GYC +    +A  ++  ML  G+ P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 97/198 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D  L    QL   G++ D+ TYNT+I  +C L  +  A  +F+ +    +  + I
Sbjct: 518 KSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADII 577

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +C    +  A  + S+ML +G   NV TY+ L+ G   ++ +K A  +  +M
Sbjct: 578 TYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN  +Y IL+ G  K G M+E +  +   +    +P   TY +LI  + K  + 
Sbjct: 638 KERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKM 697

Query: 184 TEAMQLYDSMLRNGIMPD 201
           ++A +L   M   GI P+
Sbjct: 698 SQAKELMQEMQVRGIPPN 715



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 12/201 (5%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A  +  Q+   G+ P++ TYN ++ G  +   + EA  L  ++    L PN+ T+ 
Sbjct: 591 HLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYD 650

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+    K G M +   ++ +M+ KG      TY+ LI  + K + M  A ++ +EM   
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710

Query: 127 NISPNIVSYSILIDGL------------CKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            I PN  +Y ILI G              KR    EA   F    +   +P   T A + 
Sbjct: 711 GIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACIS 770

Query: 175 RGYCKAGRPTEAMQLYDSMLR 195
               K G+  +A ++ + + +
Sbjct: 771 FTLAKPGKKADAQRILNKLYK 791



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 34/225 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++  RGLE +    ++ +       R++EA +LF+ +    L P+ + +T ++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK--------------------- 109
            F K G+  DA  +  +M EK    +VV Y+ LI+G FK                     
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPD 435

Query: 110 -------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
                          N+ +A  +  EM    + PN ++ +IL+  LC  G +E+ +   +
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L     P   T+  ++    K+ R    +  +D ++  G+  D
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLD 540



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 35/152 (23%)

Query: 94  KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG------- 146
           + +V  ++ LIDGY ++  +  A ++ E M     +P+IV+Y+ L++G CK G       
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 147 ----------------------------LMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
                                        +E+ALY +       L+PDVVTY  ++ G C
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K+G+  EA  ++  M   G++P+    +TL D
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLID 165



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 41/83 (49%)

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++  +++LIDG C+ G +  A+            PD+VTY  L+ G+CK G    A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +    + P+ +  +TL D
Sbjct: 73  KLMGEISLVNLEPNVITYTTLID 95


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 2/223 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+    D A   F      GL P++ TYN +I   C   + D+A +L   +      P+
Sbjct: 99  LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPD 158

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++  LI++  K G M DA  +F +M E+G   +V  Y+ LIDG+FK  ++ +A +++E
Sbjct: 159 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 218

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + +  ++ PNI SY+++I+GLCK G  +E+   +H    N    D+ TY+ LI G C +
Sbjct: 219 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 278

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           G    A ++Y  M  NG+ PD ++ +T+ +  L+ +G  E C+
Sbjct: 279 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR-AGRIEECL 320



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 116/219 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   L+ AL+ FG +  +G  P ++TYNT+I G     R  EA  L +++     KPN
Sbjct: 449 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPN 508

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+++L++  C+  ++D A  ++ + LEKG K +V  ++ +I G   S  ++ A  +Y 
Sbjct: 509 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 568

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + N  PN+V+++ L++G  K    E A   +   L   L PD+++Y I ++G C   
Sbjct: 569 EMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCH 628

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R ++A+   +  +  G++P  +  + L    L   G  E
Sbjct: 629 RISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 116/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ AL +  +  +   + D   Y+++I G C   RLDE   + +++T    KPN
Sbjct: 379 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 438

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I+ F +  +++DA   F  M+ KG    VVTY+ LI+G  K++    A+ + +
Sbjct: 439 PYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 498

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    PN+++YS+L++GLC+   ++ AL  +  AL+    PDV  + I+I G C +G
Sbjct: 499 EMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 558

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+QLY  M +   +P+ +  +TL +
Sbjct: 559 KVEDALQLYSEMKQRNCVPNLVTHNTLME 587



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD    +  Q+T  G +P+    N +I G+   ++L++A++ F  +      P 
Sbjct: 414 LCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 473

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K  R  +A  +  +ML+KG K N++TYS L++G  + + +  A +++ 
Sbjct: 474 VVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 533

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  E    P++  ++I+I GLC  G +E+AL  +      + +P++VT+  L+ G+ K  
Sbjct: 534 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVR 593

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A +++D +L+ G+ PD
Sbjct: 594 DFERASKIWDHILQYGLQPD 613



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 108/196 (55%), Gaps = 3/196 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++   D A +L   +  +G  PD+ +Y T+I        + +A++LF+++    + P+  
Sbjct: 136 RKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ILID F K+G + +A+ ++ ++L KGP    N+ +Y+ +I+G  K      +F+++ 
Sbjct: 196 CYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 254

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N    ++ +YS LI GLC  G ++ A   +    +N + PDVV Y  ++ GY +AG
Sbjct: 255 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 314

Query: 182 RPTEAMQLYDSMLRNG 197
           R  E ++L+  M + G
Sbjct: 315 RIEECLELWKVMEKEG 330



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 42/242 (17%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF---EKLTCVQLKPNSI 63
           +LD A +++ ++ + G+ PD++ YNT++ GY    R++E ++L+   EK  C  +    +
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV----V 335

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI    +  ++D+A  ++  + EK   A+ +TY  L+ G  K+  +  A  + EE 
Sbjct: 336 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 395

Query: 124 CENNISPNIVSYSILIDGLCKRGL-----------------------------------M 148
                  +  +YS +I+GLC+ G                                    +
Sbjct: 396 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKL 455

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+AL  F   +     P VVTY  LI G  KA R +EA  L   ML+ G  P+ +  S L
Sbjct: 456 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLL 515

Query: 209 AD 210
            +
Sbjct: 516 MN 517


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 111/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D A  LF+++    L PN 
Sbjct: 169 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNG 228

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 288

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 289 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 348

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 349 SVDAEKMLREMLSVGLKPD 367



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 135 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 194

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD A  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 195 TYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 255 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 310

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 311 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 339



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 203 LCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 262

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 263 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK 322

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY +++  +CK G
Sbjct: 323 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKG 382

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G  P      ++  YN+  +G
Sbjct: 383 DVWKGSKLLKEMQRDGHAP------SVVTYNVLMNG 412



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 98  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A  +++
Sbjct: 158 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFD 217

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 218 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 277

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 278 DLKQAHDLIDEMSMKGLKPDKFTYTTLID 306



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 18/198 (9%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS------------------ITFTILID 70
           +Y T+I   C+   L EA  L E +   + K ++                    F+ LI 
Sbjct: 2   SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ E     
Sbjct: 62  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   E  +L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 191 DSMLRNGIMPDGLLLSTL 208
            +ML +G+ PD    S L
Sbjct: 182 SAMLASGVQPDVYTYSVL 199


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 123/217 (56%), Gaps = 1/217 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L A  + +  +   G +PD++T+++II   C   ++ E   L  ++  + + PN +T+T
Sbjct: 241 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 300

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D+  K      A  ++S+M+ +G   ++V Y+ L+DG FK+ +++ A   ++ + E+
Sbjct: 301 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 360

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+V+Y+ L+DGLCK G +  A +     L+  ++P+VVTY+ +I GY K G   EA
Sbjct: 361 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 420

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           + L   M    ++P+G    T+ D  L  +G +E  I
Sbjct: 421 VSLLRKMEDQNVVPNGFTYGTVID-GLFKAGKEEMAI 456



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 108/198 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ +  + P+ +TY T++      N    A+ L+ ++    +  + + +T+L+D   
Sbjct: 283 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 342

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G + +A   F  +LE     NVVTY+ L+DG  K+ ++ SA  +  +M E ++ PN+V
Sbjct: 343 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 402

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +YS +I+G  K+G++EEA+       D +++P+  TY  +I G  KAG+   A++L   M
Sbjct: 403 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 462

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+  +  +L  L ++
Sbjct: 463 RLIGVEENNYILDALVNH 480



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 39/246 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +  LKL+ ++   G++P +++ N ++   C   +++EA+ +  ++  +++ PN  
Sbjct: 587 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 646

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
           T+ I +D                                     CK G    A M+   M
Sbjct: 647 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 706

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G   + VT++ L+ GYF   +++ A   Y  M E  ISPN+ +Y+ +I GL   GL+
Sbjct: 707 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 766

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD----GLL 204
           +E            + PD  TY  LI G  K G    +M +Y  M+ +G++P      +L
Sbjct: 767 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 826

Query: 205 LSTLAD 210
           +S  A+
Sbjct: 827 ISEFAN 832



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  L+ A+ L  ++ D+ + P+  TY T+I G     + + A++L +++  + ++ N+
Sbjct: 412 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 471

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
                L++   + GR+ +   +   M+ KG   + + Y+ LID +FK  + ++A    EE
Sbjct: 472 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 531

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  +  ++VSY++LI G+ K G +  A +A+    +  + PD+ T+ I++    K G 
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 590

Query: 183 PTEAMQLYDSMLRNGIMP 200
               ++L+D M   GI P
Sbjct: 591 SEGILKLWDKMKSCGIKP 608



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)

Query: 22  GLEPDI--------------------------------ITYNTIICGYCSLNRLDEAVQL 49
           G+ PD+                                +TYNT+I G C     DEA Q 
Sbjct: 126 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 185

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
             ++  + + P+++++  LID FCK G    A  +  ++ E     N++T++ L+  Y+ 
Sbjct: 186 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYY- 240

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
             N+ +  + Y +M  +   P++V++S +I+ LCK G + E         +  + P+ VT
Sbjct: 241 --NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 298

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           Y  L+    KA     A+ LY  M+  GI  D ++ + L D
Sbjct: 299 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 339



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G +  RG  PD +T+N+++ GY   + + +A+  +  +    + PN  T+  +I 
Sbjct: 699 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 758

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
                G + +     S+M  +G + +  TY+ LI G  K  NMK +  +Y EM  + + P
Sbjct: 759 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 818

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              +Y++LI      G M +A           + P+  TY  +I G CK
Sbjct: 819 KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 88/198 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    DA  K    L   G++     YNT+I   C L    +A  +   +      P+++
Sbjct: 657 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 716

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+  +     +  A   +S M+E G   NV TY+ +I G   +  +K       EM
Sbjct: 717 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 776

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+  +Y+ LI G  K G M+ ++  +   + + L+P   TY +LI  +   G+ 
Sbjct: 777 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 836

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L   M + G+ P+
Sbjct: 837 LQARELLKEMGKRGVSPN 854



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL  +  + + G+ P++ TYNTII G      + E  +   ++    ++P+  T+ 
Sbjct: 730 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 789

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    K G M  +  ++ +M+  G      TY+ LI  +     M  A ++ +EM + 
Sbjct: 790 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 849

Query: 127 NISPNIVSYSILIDGLCK 144
            +SPN  +Y  +I GLCK
Sbjct: 850 GVSPNTSTYCTMISGLCK 867



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)

Query: 17  QLTDRGLEPDIIT---------YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +T R  +PD+           ++T+   Y S  RL  A +    +    + P+S  +  
Sbjct: 41  SITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNS 100

Query: 68  LIDAFCKEGRM-DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           LI  F   G + D  ++++SKM+  G   +V   + LI  + K   +  A  +       
Sbjct: 101 LIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-- 158

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            IS + V+Y+ +I GLC+ GL +EA       +   +LPD V+Y  LI G+CK G    A
Sbjct: 159 -ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA 217

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
             L D +    ++   +LLS+   YNL +
Sbjct: 218 KALVDEISELNLITHTILLSSY--YNLHA 244



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 36/235 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A K F  L +    P+++TY  ++ G C    L  A  +  ++    + PN
Sbjct: 341 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 400

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +I+ + K+G +++A  +  KM ++    N  TY  +IDG FK+   + A ++ +
Sbjct: 401 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 460

Query: 122 EMC-----ENN------------------------------ISPNIVSYSILIDGLCKRG 146
           EM      ENN                              ++ + ++Y+ LID   K G
Sbjct: 461 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 520

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             E AL       +  +  DVV+Y +LI G  K G+   A   Y  M   GI PD
Sbjct: 521 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPD 574


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +  AA+++F ++  +G+   ++TYN++I G CS  +++E V+L E++  + L PN I
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  ++  FCK+G M DA      M E+  + +VV Y+ LID Y +   M+ A  V E M
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISPN+ +Y+ LI G  + G    A        +  +  DVVTY +LI   C  G  
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L D M   G+ P+ L  +T+
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTI 480



 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D A K F     R + PDI T+NT+I G C + +L +A  + + +    L P+
Sbjct: 166 LVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPS 225

Query: 62  SITFTILIDAFCKEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             T+  LID +CK+G    M    M+  +M+E G     VT+  LI+GY K+ N  +A  
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+EEM +  I+ ++V+Y+ LI GLC  G +EE +       D  L P+ +T+  +++G+C
Sbjct: 286 VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFC 345

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K G   +A    D M    + PD ++ + L D
Sbjct: 346 KKGMMADANDWIDGMTERNVEPDVVIYNILID 377



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 3/195 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+D  LK   ++ + G+ P  +T+  +I GYC  +    AV++FE++    +  + +T+ 
Sbjct: 247 HVDMLLK---EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++++   +  +M + G   N +T+ C++ G+ K   M  A D  + M E 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P++V Y+ILID   + G ME+A+          + P+V TY  LI G+ ++G    A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 187 MQLYDSMLRNGIMPD 201
             L D M   GI  D
Sbjct: 424 SGLLDEMKEKGIEAD 438



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P   + N ++ G     R+D A + F      ++ P+  TF  +I   C+ G++  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV---YEEMCENNISPNIVSYSILID 140
           +   +   G   +V TY+ LIDGY K     + + V    +EM E  ISP  V++ +LI+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK      A+  F       +   VVTY  LI G C  G+  E ++L + M   G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 201 D 201
           +
Sbjct: 333 N 333



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 93/174 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +   +  +G+ P++ TYN +I G+        A  L +++    ++ + +T+ +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A C +G +  A  +  +M E G + N +TY+ +I G+    N+KSA+++   M +  
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              N+V+Y++ I   C+ G M+EA    +  LD  L+P+ +TY  +  G  + G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  S + L+ GL     ++ A  AF  AL   + PD+ T+  +I G C+ G+  +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
              +   G+ P     ++L D   +  G+
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGA 242



 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +++TYN  I  +C + ++DEA  L  ++    L PN IT+  + +   ++G   D
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 120/211 (56%), Gaps = 1/211 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKPNSITFTILI 69
           A ++   L  RG  P+I+TY  ++ GYC+   ++EA  + +++    QL  +   F  +I
Sbjct: 297 ARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVI 356

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + +C+ GRM+DA  + ++M++   + N+  Y+ +I+GY K   M  A ++  EM    + 
Sbjct: 357 NGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVR 416

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  SY+ L+DG CK+GLM +A   ++  L N      +TY  L++G+C  G   +A++L
Sbjct: 417 PDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRL 476

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  ML+ GI P+ +  STL D   +S  +++
Sbjct: 477 WFLMLKKGIAPNEISCSTLLDGFFKSGKTEK 507



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 98/178 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  L   L D+G   D  TY+++I G  +   +D A  L + +  V L PN
Sbjct: 735 LCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPN 794

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK G +  A  +F K+  KG   N +TY+ LID + K   +  AF + +
Sbjct: 795 IVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQ 854

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            M E  I P + +YSILI+GLC +G MEEA+      ++N++ P+ VTY  LI+GY +
Sbjct: 855 RMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 109/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A +L  ++ D  L+ ++  YN +I GYC L R+ EA  +  ++T V ++P++ ++ 
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN 423

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D +CK+G M+ A   ++ ML  G  A  +TY+ L+ G+    ++  A  ++  M + 
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+PN +S S L+DG  K G  E+AL  +   L   L  +  T+  +I G CK  R  EA
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L D M +    PD +   TL
Sbjct: 544 EELVDKMKQWRCPPDIITYRTL 565



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 102/189 (53%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           ++ L  D   +  +I GYC + R+++A +L  ++   +L+ N   + I+I+ +CK GRM 
Sbjct: 342 NKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMV 401

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A  +  +M   G + +  +Y+ L+DGY K   M  AF+ Y  M  N  +   ++Y+ L+
Sbjct: 402 EAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALL 461

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            G C  G +++AL  +   L   + P+ ++ + L+ G+ K+G+  +A+ L+   L  G+ 
Sbjct: 462 KGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLA 521

Query: 200 PDGLLLSTL 208
            +    +T+
Sbjct: 522 KNTTTFNTV 530



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 27/246 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN-- 61
           KE  L  A  L+ ++ ++GL P++   ++++  +    + DEA  + + L    + P+  
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700

Query: 62  ------------------------SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
                                    I + I+I   CK GR++DA  + + + +KG  A+ 
Sbjct: 701 APRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TYS LI G   S  +  AFD+ + M    ++PNIV+Y+ LI GLCK G +  A+  F  
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                + P+ +TY  LI  +CK G  TEA +L   M+  GI P     S L +  L + G
Sbjct: 821 LWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILIN-GLCTQG 879

Query: 218 SQEHCI 223
             E  I
Sbjct: 880 YMEEAI 885



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 94/181 (51%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I +N +I G C L R+++A  L   L       ++ T++ LI      G +D A  +   
Sbjct: 726 IMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDT 785

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ML  G   N+VTY+ LI G  KS  +  A  +++++    ISPN ++Y+ LID  CK G 
Sbjct: 786 MLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGY 845

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EA       ++  + P V TY+ILI G C  G   EA++L D M+ N + P+ +   T
Sbjct: 846 ITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWT 905

Query: 208 L 208
           L
Sbjct: 906 L 906



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 4/224 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K    + AL L+ +   RGL  +  T+NT+I G C + R+ EA +L +K+   +  P+
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L   +CK G MD A+ + +++   G    +  ++ LI G+F ++      D+  
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +SPN V+Y  LI G CK G +  A   +   ++  L+P++   + L+  + + G
Sbjct: 619 EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKG 678

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEH 221
           +  EA  +  +++   ++PD     L +  +A++    +G   H
Sbjct: 679 KFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHH 722



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A + +  +   G     +TYN ++ G+CSL  +D+A++L+  +    + PN I
Sbjct: 431 KKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEI 490

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           + + L+D F K G+ + A  ++ + L +G   N  T++ +I+G  K + M  A ++ ++M
Sbjct: 491 SCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM 550

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL---- 164
            +    P+I++Y  L  G CK G M+ A               +  F+  +  H +    
Sbjct: 551 KQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQH 610

Query: 165 ----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                           P+ V Y  LI G+CK G    A  LY  M+  G++P+  + S+L
Sbjct: 611 GKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSL 670



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 36/240 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD AL++F ++   G    + + N+I+        L   V +FE++      P+  T  
Sbjct: 188 QLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVA 247

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+  A+CK   +  A     +M + G + N+V Y  +++GY +      A  + + +   
Sbjct: 248 IMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGR 307

Query: 127 NISPNIVSYSIL------------------------------------IDGLCKRGLMEE 150
             SPNIV+Y++L                                    I+G C+ G ME+
Sbjct: 308 GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMED 367

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A    +  +D+ L  ++  Y I+I GYCK GR  EA  +   M   G+ PD    ++L D
Sbjct: 368 AARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVD 427



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 26/220 (11%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++++RGL P+ + Y  +I G+C    L  A  L+ ++    L PN    + L+  F ++G
Sbjct: 619 EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKG 678

Query: 77  RMDDATMMFSKM-------------LEKGPKANVV-------------TYSCLIDGYFKS 110
           + D+A ++   +             LE G  AN +              ++ +I G  K 
Sbjct: 679 KFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKL 738

Query: 111 QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             ++ A ++  ++ +     +  +YS LI G    G ++ A       L   L P++VTY
Sbjct: 739 GRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             LI G CK+G  + A+ L+  +   GI P+ +  +TL D
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLID 838



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 64/112 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ LF +L  +G+ P+ ITYNT+I  +C    + EA +L +++    + P 
Sbjct: 805 LCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPT 864

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
             T++ILI+  C +G M++A  +  +M+E     N VTY  LI GY + +++
Sbjct: 865 VFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESV 916


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 113/198 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +T  GL P ++++NT++ GY  +  LDE  +L   +    ++P+  T+++LI+
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLIN 214

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y +M   ++ P
Sbjct: 215 GLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP 274

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G    A +  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M++  I  D +  + L
Sbjct: 335 KRMIKENIRLDDVAYTAL 352



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ TY+ +I G C  +++D+A  LF+++    L PN 
Sbjct: 182 IKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D V Y  LI   C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++ D GL P+ +T+ T+I G+C   R+D A++++ ++    L P+
Sbjct: 216 LCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI  LC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                 +L   M R+G +P+
Sbjct: 396 DVWTGSKLLKEMQRDGYLPN 415



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 104/191 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S M   G + +V TYS LI+G  K   M  A  +++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   LLPD++TY  LI G CK G   +A  L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM  +   PN+V+
Sbjct: 406 EMQRDGYLPNVVT 418



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E   +    T   +I+   K +  K  +  YEE  
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGL---------------MEEALYAFHCALDNHL------ 163
           E     ++  ++IL+   CK G                +  ++ +F+  ++ ++      
Sbjct: 129 ECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV TY++LI G CK  +  +A  L+D ML NG++P+G+  +TL 
Sbjct: 189 EGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 123/217 (56%), Gaps = 1/217 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L A  + +  +   G +PD++T+++II   C   ++ E   L  ++  + + PN +T+T
Sbjct: 239 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D+  K      A  ++S+M+ +G   ++V Y+ L+DG FK+ +++ A   ++ + E+
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+V+Y+ L+DGLCK G +  A +     L+  ++P+VVTY+ +I GY K G   EA
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           + L   M    ++P+G    T+ D  L  +G +E  I
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVID-GLFKAGKEEMAI 454



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 108/198 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ +  + P+ +TY T++      N    A+ L+ ++    +  + + +T+L+D   
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G + +A   F  +LE     NVVTY+ L+DG  K+ ++ SA  +  +M E ++ PN+V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +YS +I+G  K+G++EEA+       D +++P+  TY  +I G  KAG+   A++L   M
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+  +  +L  L ++
Sbjct: 461 RLIGVEENNYILDALVNH 478



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 35/232 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +  LKL+ ++   G++P +++ N ++   C   +++EA+ +  ++  +++ PN  
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 644

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
           T+ I +D                                     CK G    A M+   M
Sbjct: 645 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G   + VT++ L+ GYF   +++ A   Y  M E  ISPN+ +Y+ +I GL   GL+
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +E            + PD  TY  LI G  K G    +M +Y  M+ +G++P
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  L+ A+ L  ++ D+ + P+  TY T+I G     + + A++L +++  + ++ N+
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
                L++   + GR+ +   +   M+ KG   + + Y+ LID +FK  + ++A    EE
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  +  ++VSY++LI G+ K G +  A +A+    +  + PD+ T+ I++    K G 
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 588

Query: 183 PTEAMQLYDSMLRNGIMP 200
               ++L+D M   GI P
Sbjct: 589 SEGILKLWDKMKSCGIKP 606



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)

Query: 22  GLEPDI--------------------------------ITYNTIICGYCSLNRLDEAVQL 49
           G+ PD+                                +TYNT+I G C     DEA Q 
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
             ++  + + P+++++  LID FCK G    A  +  ++ E     N++T++ L+  Y+ 
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYY- 238

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
             N+ +  + Y +M  +   P++V++S +I+ LCK G + E         +  + P+ VT
Sbjct: 239 --NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           Y  L+    KA     A+ LY  M+  GI  D ++ + L D
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  + G +  RG  PD +T+N+++ GY   + + +A+  +  +    + PN  T+  +I 
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
                G + +     S+M  +G + +  TY+ LI G  K  NMK +  +Y EM  + + P
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              +Y++LI      G M +A           + P+  TY  +I G CK
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 88/198 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    DA  K    L   G++     YNT+I   C L    +A  +   +      P+++
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+  +     +  A   +S M+E G   NV TY+ +I G   +  +K       EM
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+  +Y+ LI G  K G M+ ++  +   + + L+P   TY +LI  +   G+ 
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 834

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L   M + G+ P+
Sbjct: 835 LQARELLKEMGKRGVSPN 852



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL  +  + + G+ P++ TYNTII G      + E  +   ++    ++P+  T+ 
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    K G M  +  ++ +M+  G      TY+ LI  +     M  A ++ +EM + 
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847

Query: 127 NISPNIVSYSILIDGLCK 144
            +SPN  +Y  +I GLCK
Sbjct: 848 GVSPNTSTYCTMISGLCK 865



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)

Query: 17  QLTDRGLEPDIIT---------YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +T R  +PD+           ++T+   Y S  RL  A +    +    + P+S  +  
Sbjct: 39  SITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNS 98

Query: 68  LIDAFCKEGRM-DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           LI  F   G + D  ++++SKM+  G   +V   + LI  + K   +  A  +       
Sbjct: 99  LIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-- 156

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            IS + V+Y+ +I GLC+ GL +EA       +   +LPD V+Y  LI G+CK G    A
Sbjct: 157 -ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA 215

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
             L D +    ++   +LLS+   YNL +
Sbjct: 216 KALVDEISELNLITHTILLSSY--YNLHA 242



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 36/235 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A K F  L +    P+++TY  ++ G C    L  A  +  ++    + PN
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ +I+ + K+G +++A  +  KM ++    N  TY  +IDG FK+   + A ++ +
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458

Query: 122 EMC-----ENN------------------------------ISPNIVSYSILIDGLCKRG 146
           EM      ENN                              ++ + ++Y+ LID   K G
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             E AL       +  +  DVV+Y +LI G  K G+   A   Y  M   GI PD
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPD 572


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 111/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D A  LF+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 368 SVDAEKMLREMLSVGLKPD 386



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD A  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 358



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY +++  +CK G
Sbjct: 342 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G  P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHAP------SVVTYNVLMNG 431



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A  +++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 297 DLKQAHDLIDEMSMKGLKPDKFTYTTLID 325



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 18/198 (9%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS------------------ITFTILID 70
           +Y T+I   C+   L EA  L E +   + K ++                    F+ LI 
Sbjct: 21  SYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLIT 80

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ E     
Sbjct: 81  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 140

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   E  +L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 191 DSMLRNGIMPDGLLLSTL 208
            +ML +G+ PD    S L
Sbjct: 201 SAMLASGVQPDVYTYSVL 218


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++  R + P+ ITYN+II G+    ++  A ++F++++ + L PN +T+  LID  C
Sbjct: 260 LLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHC 319

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            +G  + A  +   M   GPK N V+YS L++G  +    + +  + E M  N +    +
Sbjct: 320 HDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCI 379

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +IDGLC+ GL+ E++      L + ++PDVVT+++LI G+C+ G+     ++   M
Sbjct: 380 AYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKM 439

Query: 194 LRNGIMPDGLLLSTLADYNLQSSG 217
            + G+ P+ ++ +TL  YN   +G
Sbjct: 440 YKAGLAPNSIIYTTLI-YNYCKTG 462



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 109/207 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+    AAL+L  Q+  +G+E D  TYN ++   C  NR  +   L +K+    + PN I
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I+ F KEG++  AT +F +M       N VTY+ LIDG+    N + A  + E M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN VSYS L++GLC+    E +         N ++   + Y  +I G C+ G  
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            E+++L D ML++G++PD +  S L +
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLIN 421



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 105/196 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  + AA ++F +++   L P+ +TYN +I G+C     ++A+ + E +     KPN
Sbjct: 283 FVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPN 342

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++++ L++  C+  + + +  +  +M   G     + Y+ +IDG  ++  +  +  + +
Sbjct: 343 EVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLD 402

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M ++ + P++V++S+LI+G C+ G ++             L P+ + Y  LI  YCK G
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 182 RPTEAMQLYDSMLRNG 197
              EA ++Y +M R G
Sbjct: 463 DVVEAFKVYVAMSRIG 478



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 108/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  + A    F ++  R + PD+ T+N +I   C   +L +A  L +K+      P+
Sbjct: 143 LVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPS 202

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +++ +CK+GR   A  +  +M  KG +A+  TY+ L+D   K+      + + +
Sbjct: 203 VVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLK 262

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ISPN ++Y+ +I+G  K G +  A   F      +LLP+ VTY  LI G+C  G
Sbjct: 263 KMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDG 322

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A+ + + M   G  P+ +  S L
Sbjct: 323 NFEQALTILEMMEATGPKPNEVSYSAL 349



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 43/233 (18%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT- 66
           L+ ++KL  ++   G+ PD++T++ +I G+C + ++    ++  K+    L PNSI +T 
Sbjct: 394 LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453

Query: 67  ----------------------------------ILIDAFCKEGRMDDATMMFSKMLEKG 92
                                             +L+ + CK+G++  A   F  M + G
Sbjct: 454 LIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIG 513

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              N +T+ C+I+GY  S N   AF +++EM +    P+  +Y  L+  LC+ G  +EA 
Sbjct: 514 NVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEA- 572

Query: 153 YAFHCALDN-HLLP---DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 LD  H +P   D VTY  ++    K+G  T+A+ L+D M++  ++PD
Sbjct: 573 ---KRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPD 622



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 100/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +    + +  +  ++   G+    I Y  +I G C    L+E+V+L +K+    + P+
Sbjct: 353 LCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPD 412

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF++LI+ FC+ G++ +   +  KM + G   N + Y+ LI  Y K+ ++  AF VY 
Sbjct: 413 VVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYV 472

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M       N    ++L+  LCK G +  A Y FH       +P+ +T+  +I GY  +G
Sbjct: 473 AMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSG 532

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +A  ++D M++ G  P
Sbjct: 533 NGLKAFSMFDEMIKAGHHP 551



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 102/208 (49%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E  +  AL+ F  +  RG  P + T N ++       ++      F+++   ++ P+ 
Sbjct: 109 LREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDV 168

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF ILI+  C EG++  A  +  KM E G   +VVTY+ +++ Y K    K+A ++ ++
Sbjct: 169 STFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQ 228

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I  +  +Y++L+D LCK     +            + P+ +TY  +I G+ K G+
Sbjct: 229 MGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGK 288

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A +++  M    ++P+ +  + L D
Sbjct: 289 IGAATRIFQEMSMLNLLPNCVTYNALID 316



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A   F  ++  G  P+ IT++ II GY +     +A  +F+++      P+
Sbjct: 493 LCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPS 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+ A C+ G+  +A  +  K+       + VTY+ ++   FKS  +  A  +++
Sbjct: 553 HFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFD 612

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKA 180
           EM + N+ P+  +Y+I+  GL +RG M  AL+ +   L    + P+ V Y   + G  +A
Sbjct: 613 EMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+   A+   + M +NG+  D
Sbjct: 673 GQSKAALYFCEDMEKNGLCAD 693



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF-TILI 69
           A  +F ++   G  P   TY  ++   C   +  EA +L +KL  +    +++T+ TIL+
Sbjct: 537 AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILV 596

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENNI 128
           + F K G + DA  +F +M+++    +  TY+ +  G  +   M +A   Y  +  +  +
Sbjct: 597 ETF-KSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAV 655

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP  V Y+  +DGL + G  + ALY       N L  D++   +++ GY + G+  +A  
Sbjct: 656 SPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGD 715

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           ++ +M+ +GI     +  +LA YN+   G
Sbjct: 716 IF-TMMWSGIT----ISPSLATYNILLHG 739



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K N   F +LI  + +EG + DA   F  M  +G   +V T + L+    K + + + + 
Sbjct: 95  KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            ++EM    + P++ +++ILI+ LC  G +++A Y      ++  +P VVTY  ++  YC
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K GR   A++L D M   GI  D    + L D
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVD 246



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 102/210 (48%), Gaps = 1/210 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K++  ++  G + +    N ++   C   ++  A   F  ++ +   PNSITF  +I+
Sbjct: 467 AFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIIN 526

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +   G    A  MF +M++ G   +  TY  L+    ++   K A  + +++     + 
Sbjct: 527 GYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAV 586

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ ++    K G++ +A+  F   +  ++LPD  TYAI+  G  + G+   A+  Y
Sbjct: 587 DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646

Query: 191 DSMLRNG-IMPDGLLLSTLADYNLQSSGSQ 219
            ++L  G + P+ ++ +T  D   ++  S+
Sbjct: 647 GNLLGKGAVSPEKVMYTTFVDGLFRAGQSK 676



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 91/190 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD  LKL  ++   G+  D  T+N +I  YC  + + +A  L   +    + P+  
Sbjct: 777 KSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMT 836

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   +I    +   + ++ ++  +MLE+G   +   Y  L++   +  ++  AF + +EM
Sbjct: 837 THDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEM 896

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               IS   V+ S L+ GL K G +EEA       L   L+P + T+  L+  +C+    
Sbjct: 897 EALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESL 956

Query: 184 TEAMQLYDSM 193
            EA++L D+M
Sbjct: 957 VEALKLKDTM 966



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 87/172 (50%), Gaps = 5/172 (2%)

Query: 3    IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            ++E HL     L  ++ +RG  PD   Y  ++   C +  +  A +L +++  + +    
Sbjct: 851  VQESHL-----LLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGD 905

Query: 63   ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +  + L+    K G++++A ++   ML K     + T++ L+  + +++++  A  + + 
Sbjct: 906  VAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDT 965

Query: 123  MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            M   ++  ++++Y++LI GLC  G +  AL  +       L P++ TY ILI
Sbjct: 966  MDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 81/176 (46%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P + TYN ++ GY     L +   L+  +    + P+ +T   LI  FCK   +D   
Sbjct: 726 ISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGL 785

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  KML  G   +  T++ LI  Y ++  +  AFD+   M   +I P++ ++  +I  L
Sbjct: 786 KLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVL 845

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
            +   ++E+    H  L+   +PD   Y  L+   C+ G    A +L D M   GI
Sbjct: 846 SRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 67/136 (49%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            H+  A KL  ++   G+    +  + ++ G     +++EA  + + +    L P   TFT
Sbjct: 885  HIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFT 944

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+  FC+   + +A  +   M     K +V+ Y+ LI G     ++ SA  +Y+E+ + 
Sbjct: 945  TLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQR 1004

Query: 127  NISPNIVSYSILIDGL 142
             + PN+ +Y ILID +
Sbjct: 1005 GLWPNMTTYCILIDAI 1020



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 47/88 (53%)

Query: 21   RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
            + L P I T+ T++  +C    L EA++L + +    +K + I + +LI   C +G +  
Sbjct: 934  KSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVAS 993

Query: 81   ATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            A  ++ ++ ++G   N+ TY  LID  F
Sbjct: 994  ALKLYKEIKQRGLWPNMTTYCILIDAIF 1021



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 84  MFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           +F  ++   P  K+N   +  LI  Y +   +  A + +  M     +P++ + ++L+  
Sbjct: 83  VFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGK 142

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           L K   +      F   L   + PDV T+ ILI   C  G+  +A  L   M  +G +P 
Sbjct: 143 LVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPS 202

Query: 202 GLLLSTLADY 211
            +  +T+ ++
Sbjct: 203 VVTYNTVLNW 212



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 1    MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            M  +   L  ALKL   +    ++ D+I YN +I G C+   +  A++L++++    L P
Sbjct: 949  MFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008

Query: 61   NSITFTILIDA-FCKEGRMDDATMMFSKMLEKG 92
            N  T+ ILIDA F  +  +    ++   + E+G
Sbjct: 1009 NMTTYCILIDAIFTNDISLAKGEVLLKDLQERG 1041


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFT 66
           +D A ++F  +   G  PD++TYNT+I G C  N +    +LF+++       P+ +T+T
Sbjct: 194 VDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYT 253

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  FCK G+M +A+ +F +M+  G + NV+T++ LIDG+ K  N+  A  +Y +M   
Sbjct: 254 SIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYF 313

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + S ++V+++ LIDG C+ G +   L  ++     ++ P V TYA+LI   CK  R  EA
Sbjct: 314 DCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEA 373

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
                 +  + I+P   + + + D
Sbjct: 374 RDFLGQIKNSSIIPKPFMYNPVID 397



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 36/243 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +    +LF ++  R    PDI+TY +II G+C   ++ EA  LFE++    ++P
Sbjct: 223 LCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQP 282

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N ITF +LID F K G + +A  M+ KM      A+VVT++ LIDGY ++  +      +
Sbjct: 283 NVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFW 342

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------YAFHCALD----- 160
             M   N+SP + +Y++LI+ LCK   + EA                + ++  +D     
Sbjct: 343 NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKA 402

Query: 161 ------NHLL---------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                 N +L         PD VT+ ILI G+C  GR  EA+ +++ ML     PD + +
Sbjct: 403 GNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITV 462

Query: 206 STL 208
           ++L
Sbjct: 463 NSL 465



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 1/201 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+K+  +  A+ LF +       PD  T+N +I G C +  +D A ++F+ +      P
Sbjct: 152 VLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLP 211

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDV 119
           + +T+  LI+  CK   +     +F ++  +     ++VTY+ +I G+ KS  MK A ++
Sbjct: 212 DVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNL 271

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +EEM  + I PN++++++LIDG  K G + EA   +          DVVT+  LI GYC+
Sbjct: 272 FEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCR 331

Query: 180 AGRPTEAMQLYDSMLRNGIMP 200
           AG+    ++ ++ M    + P
Sbjct: 332 AGQVNHGLKFWNVMKTRNVSP 352



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D   KL  ++  + +  +   YN ++      N++ EA+ LF++   +Q  P++ TF I
Sbjct: 124 FDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNI 183

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
           LI   C+ G +D A  +F  M   G   +VVTY+ LI+G  K+  ++   ++++E+   +
Sbjct: 184 LIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRS 243

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + SP+IV+Y+ +I G CK G M+EA   F   + + + P+V+T+ +LI G+ K G   EA
Sbjct: 244 DCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEA 303

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +Y  M       D +  ++L D
Sbjct: 304 EAMYRKMAYFDCSADVVTFTSLID 327



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 87/164 (53%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D++T+ ++I GYC   +++  ++ +  +    + P   T+ +LI+A CKE R+++A    
Sbjct: 318 DVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFL 377

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            ++           Y+ +IDG+ K+ N+     + +EM E    P+ V+++ILI G C +
Sbjct: 378 GQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVK 437

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           G M EA+  F+  L     PD +T   LI    KAG P EA ++
Sbjct: 438 GRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 13/211 (6%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H D    +F  +   G  PD      ++      +  D   +L  ++   +++ NS  + 
Sbjct: 88  HHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYN 147

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+    K+ ++ +A  +F + L      +  T++ LI G  +   +  AF+V+++M   
Sbjct: 148 NLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESF 207

Query: 127 NISPNIVSYSILIDGLCK-----RG--LMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              P++V+Y+ LI+GLCK     RG  L +E      C+      PD+VTY  +I G+CK
Sbjct: 208 GCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCS------PDIVTYTSIISGFCK 261

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +G+  EA  L++ M+R+GI P+ +  + L D
Sbjct: 262 SGKMKEASNLFEEMMRSGIQPNVITFNVLID 292



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++  LK +  +  R + P + TY  +I   C  NRL+EA     ++    + P    + 
Sbjct: 334 QVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYN 393

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID FCK G +D+  ++  +M EK    + VT++ LI G+     M  A +++  M   
Sbjct: 394 PVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLAT 453

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
             +P+ ++ + LI  L K G+  EA      AL++  L
Sbjct: 454 RCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNL 491



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ A    GQ+ +  + P    YN +I G+C    +DE   + +++   +  P+
Sbjct: 364 LCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPD 423

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFTILI   C +GRM +A  +F++ML      + +T + LI    K+     A+ + +
Sbjct: 424 KVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRK 483

Query: 122 EMCEN 126
              E+
Sbjct: 484 MALED 488



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 71/159 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+ + C+ G  D   ++F  M   G   +      L+    ++ +      +  E+
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N   Y+ L+  L K+  + EA+Y F   L     PD  T+ ILIRG C+ G  
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             A +++  M   G +PD +  +TL +   +++  Q  C
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGC 233


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 38/234 (16%)

Query: 6   CHLDAALKLFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C   A  + FG    + D GL PD  TY  +I G C   R +EA  L ++++C +LKPN 
Sbjct: 268 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 327

Query: 63  ITFTILIDAF-----------------------------------CKEGRMDDATMMFSK 87
           + +  LID F                                   CK G+MD A+++  +
Sbjct: 328 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 387

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+    + + +TY+ +I+G+F+  + K AF +  EM    ISPN+ +YSI+I GLC+ G 
Sbjct: 388 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 447

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            E+A           L P+   YA LI GYC+ G  + A +++D M +  ++PD
Sbjct: 448 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ + K F Q+ +RGL P+  TY+ +I GY     L+ A QL +++    LKPN
Sbjct: 512 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 571

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG----------------------------- 92
            + +  L++++ K   ++  +  F  ML++G                             
Sbjct: 572 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 631

Query: 93  ------PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                    +V  YS LI G  K+ + + AF + +EM +  + PNIV Y+ LIDGLCK G
Sbjct: 632 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 691

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +  A   F+  L   L+P+ VTY  LI G CK G  + A  LY+ ML  GI PD  + S
Sbjct: 692 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 751

Query: 207 TL 208
            L
Sbjct: 752 VL 753



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 107/203 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  Q+      PD ITYN II G+   +   +A +L  ++    + PN
Sbjct: 372 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I   C+ G  + A+ +  +M  KG K N   Y+ LI GY +  N+  A ++++
Sbjct: 432 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 491

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + N+ P++  Y+ LI GL K G +EE+   F    +  LLP+  TY+ LI GY K G
Sbjct: 492 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 551

Query: 182 RPTEAMQLYDSMLRNGIMPDGLL 204
               A QL   ML  G+ P+ ++
Sbjct: 552 DLESAEQLVQRMLDTGLKPNDVI 574



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 115/220 (52%), Gaps = 5/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E + D A K+  ++   G++P+ ITY+ ++ G C + ++D A  L +++     +P+
Sbjct: 337 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+ ++I+   +     DA  + S+M   G   NV TYS +I G  +S   + A D+ E
Sbjct: 397 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 456

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN   Y+ LI G C+ G +  A   F      ++LPD+  Y  LI G  K G
Sbjct: 457 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 516

Query: 182 RPTEAMQLYDSMLRNGIMPD-----GLLLSTLADYNLQSS 216
           R  E+ + +  M   G++P+     GL+   L + +L+S+
Sbjct: 517 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 556



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 106/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  A ++F ++T   + PD+  YN++I G   + R++E+ + F ++    L PN  
Sbjct: 479 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 538

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI  + K G ++ A  +  +ML+ G K N V Y  L++ YFKS +++     ++ M
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +  +   Y ILI  L   G ME A         N  +PDV  Y+ LI G CK    
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 658

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A  + D M + G+ P+ +  + L D
Sbjct: 659 EKAFGILDEMSKKGVDPNIVCYNALID 685



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++AA ++   +   G  PD+  Y+++I G C     ++A  + ++++   + PN + + 
Sbjct: 622 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 681

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK G +  A  +F+ +L KG   N VTY+ LIDG  K  ++ +AF +Y EM   
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 741

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            I+P+   YS+L  G    G +E+A++      L  H    + ++  L+ G+CK G+  E
Sbjct: 742 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQE 799

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
            ++L   ++  G++P+ L +  +
Sbjct: 800 TLKLLHVIMGRGLVPNALTIENI 822



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  L  ++T +GL+P+   Y  +I GYC    +  A ++F+K+T V + P+   +  L
Sbjct: 449 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 508

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I    K GR++++T  F++M E+G   N  TYS LI GY K+ +++SA  + + M +  +
Sbjct: 509 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN V Y  L++   K   +E+    F   LD  ++ D   Y ILI     +G    A +
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +   + +NG +PD  + S+L
Sbjct: 629 VLSGIEKNGSVPDVHVYSSL 648



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 1/210 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+ P++ TY+ +I G C     ++A  L E++T   LKPN+  +  LI 
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+EG +  A  +F KM +     ++  Y+ LI G  K   ++ +   + +M E  + P
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +YS LI G  K G +E A       LD  L P+ V Y  L+  Y K+    +    +
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            SML  G+M D  +   L  +NL SSG+ E
Sbjct: 596 KSMLDQGVMLDNRIYGILI-HNLSSSGNME 624



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 1/189 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  +  +++ +G++P+I+ YN +I G C    +  A  +F  +    L PN
Sbjct: 652 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 711

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID  CK G + +A  ++++ML  G   +   YS L  G   + +++ A  + E
Sbjct: 712 CVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIE 771

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     + +I S++ L+DG CKRG M+E L   H  +   L+P+ +T   +I G  +AG
Sbjct: 772 EMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 830

Query: 182 RPTEAMQLY 190
           + +E   ++
Sbjct: 831 KLSEVHTIF 839



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  + D+G+  D   Y  +I    S   ++ A ++   +      P+   ++ LI   CK
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
               + A  +  +M +KG   N+V Y+ LIDG  KS ++  A +V+  +    + PN V+
Sbjct: 655 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 714

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ LIDG CK G +  A Y ++  L   + PD   Y++L  G   AG   +AM L + M 
Sbjct: 715 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774

Query: 195 RNG 197
             G
Sbjct: 775 LRG 777



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 6/136 (4%)

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++A+CK    D A  +  +M E+G   N VTY+ LI G  +S  ++ AF   ++M +  +
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 129 SPNIVSYSILIDGLCKRGLMEEA---LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            P+  +Y  LI+GLCK     EA   L    CA    L P+VV YA LI G+ + G   E
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCA---ELKPNVVVYANLIDGFMREGNADE 345

Query: 186 AMQLYDSMLRNGIMPD 201
           A ++   M+  G+ P+
Sbjct: 346 AFKMIKEMVAAGVQPN 361



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 19/163 (11%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ L  ++  RG    I ++N ++ G+C   ++ E ++L   +    L PN++T   
Sbjct: 763 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL------------------IDGYFK 109
           +I    + G++ +   +F ++ +K  ++    +S L                  I  + K
Sbjct: 822 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 881

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
             N+  A  + + +   +      SY  ++D LC++G + EAL
Sbjct: 882 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 924



 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 19/150 (12%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +   LKL   +  RGL P+ +T   II G     +L E   +F +L     +  + 
Sbjct: 793 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 852

Query: 64  TFTIL------------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
            F+ L                  I   CKEG +D A M+   ++ K       +Y  ++D
Sbjct: 853 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 912

Query: 106 GYFKSQNMKSAFDVYEEM-CENNISPNIVS 134
              +   +  A ++ +EM    N+ P +V+
Sbjct: 913 NLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 111/194 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G    +++D+A +LF+++    L PN +TFT 
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTT 252

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ ++M    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKG 312

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 372

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G+ PD
Sbjct: 373 KMLREMLSVGLNPD 386



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P  ++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+   KE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN----HLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D+     L PD +TY  LI G CK
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDDMSRKGLKPDKITYTTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D ++ + L
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDDVVYTAL 358



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +   M  KG K + +TY+ LIDG  K  ++ SAF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 AVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M R G+ PD +  +TL D
Sbjct: 297 DLKQAHDLIDDMSRKGLKPDKITYTTLID 325



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P  V+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVL 218


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 114/205 (55%), Gaps = 1/205 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN-RLDEAVQLFEKLTCVQLK 59
           +L++E  L+ A K +  + + GL P + + N +I   C  +  +D  +++F ++      
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+S T+  LI   C+ GR+D+A  +F++M+EK     VVTY+ LI+G   S+N+  A   
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            EEM    I PN+ +YS L+DGLCK G   +A+  F   +     P++VTY  LI G CK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLL 204
             +  EA++L D M   G+ PD  L
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGL 334



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KLF ++ ++   P ++TY ++I G C    +DEA++  E++    ++PN  T++
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D  CK+GR   A  +F  M+ +G + N+VTY+ LI G  K Q ++ A ++ + M   
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI-------LIRGYCK 179
            + P+   Y  +I G C      EA       +   + P+ +T+ I       ++RG C 
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC- 385

Query: 180 AGRPTEAMQLYDSMLRNGI 198
           A  P+ A  LY SM   GI
Sbjct: 386 ANYPSRAFTLYLSMRSRGI 404



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +L++F ++ D   +P    Y T++      N+L+ A + ++ +  + L P   +  +LI 
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164

Query: 71  AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           A C+ +G +D    +F +M ++G   +  TY  LI G  +   +  A  ++ EM E + +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P +V+Y+ LI+GLC    ++EA+          + P+V TY+ L+ G CK GR  +AM+L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           ++ M+  G  P+ +  +TL
Sbjct: 285 FEMMMARGCRPNMVTYTTL 303



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 8/217 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A++   ++  +G+EP++ TY++++ G C   R  +A++LFE +     +PN +T+T
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   CKE ++ +A  +  +M  +G K +   Y  +I G+      + A +  +EM   
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361

Query: 127 NISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            I+PN ++++I       ++ GLC       A   +       +  +V T   L++  CK
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCK 420

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            G   +A+QL D ++ +G +P       L  + L  +
Sbjct: 421 KGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)

Query: 34  IC-GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           IC GY  ++R  +++++F K+      P+   +  ++    +E +++ A   +  M E G
Sbjct: 92  ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151

Query: 93  PKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               V + + LI    ++   + +   ++ EM +    P+  +Y  LI GLC+ G ++EA
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              F   ++    P VVTY  LI G C +    EAM+  + M   GI P+    S+L D
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 29/173 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A++L  ++  +GL+PD   Y  +I G+C++++  EA    +++    + PN
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ I +                S  + +G  AN  +                AF +Y 
Sbjct: 367 RLTWNIHVKT--------------SNEVVRGLCANYPS---------------RAFTLYL 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            M    IS  + +   L+  LCK+G  ++A+      + +  +P   T+ +LI
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 125/210 (59%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKP 60
           L K+  +D A  L  ++ + G+E D+ +YN++I G+CS+ R   AV+L +++    ++ P
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  TF ILID  CK GR+ +A  + + M+++G K ++V+Y+ L++GY  S ++  A  V+
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E    PN++SY  LI+G CK  +++EA+       + +L+PD VTY  L+ G  K+
Sbjct: 340 DKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS 399

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR      L ++M  +G   D +  + L D
Sbjct: 400 GRSLYEWDLVEAMRASGQPADLITYNVLLD 429



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 110/199 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F ++ +R   P++I+Y T+I GYC +  +DEA+ L  ++    L P+++T+  L+D
Sbjct: 335 AKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLD 394

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K GR      +   M   G  A+++TY+ L+D YFK +    A  +++ + E  ISP
Sbjct: 395 GLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISP 454

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI +Y+IL+DGLCK G ++ A   F         P++ TY I+I G CK G   EA  L 
Sbjct: 455 NIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALL 514

Query: 191 DSMLRNGIMPDGLLLSTLA 209
             M+ N  +P+ +   T+ 
Sbjct: 515 YKMVNNNYLPNYITFDTIV 533



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 112/211 (53%), Gaps = 2/211 (0%)

Query: 2   LIKECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LIK    +A + L+  L  +  ++P +IT++ +I  +  L ++  A  L   +  +  + 
Sbjct: 79  LIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQI 138

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +    T L+   C +GR+ +A  +  + +++G + + V Y  +I+G  K    + A  ++
Sbjct: 139 DVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMF 198

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +  + PN++ Y+ +IDGLCK+GL++EA       ++N +  DV +Y  +I G+C  
Sbjct: 199 PKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSV 258

Query: 181 GRPTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
           GR   A++L D M +R  + PD    + L D
Sbjct: 259 GRFQAAVKLLDEMVVRGKVYPDVYTFNILID 289



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F  L+ +G +P+I TYN +I G C    LDEA  L  K+      PN
Sbjct: 466 LCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525

Query: 62  SITFTILIDA 71
            ITF  ++ A
Sbjct: 526 YITFDTIVRA 535


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 1/198 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  +  ++ + G  PD ++YN II   C  NR+ EA +L ++    +  P 
Sbjct: 197 LCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPG 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVY 120
               T+L+D  CK  R+++A ++  +MLE G +A +VVTYS +IDG  K+  +  A+ V 
Sbjct: 257 VPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVL 316

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M      P++V+Y+ +ID  CK G ++EA   F    +     DVV Y ILIRGYC+A
Sbjct: 317 QKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRA 376

Query: 181 GRPTEAMQLYDSMLRNGI 198
            +  EA+ + + M   GI
Sbjct: 377 AKVDEAIAMIEEMAGRGI 394



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 2/193 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL++F Q+ D  ++PD   Y  +I   C +N+LD A   FE++      P+ +T+T+L
Sbjct: 31  NKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVL 90

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + +  K  + +    +F +ML KG    +VTY+ +++GY K+  +  A  +   +     
Sbjct: 91  VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 150

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP+   YS LIDGLCK    EEA   F  A  +  + DV+ Y   I G CKAG+  EA  
Sbjct: 151 SPSGSLYSTLIDGLCKHDRHEEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKA 208

Query: 189 LYDSMLRNGIMPD 201
           ++  M+  G  PD
Sbjct: 209 VHVKMIEAGCAPD 221



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 2/196 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C  +   ++F ++  +G  P+++TY T++ GYC   R+D+A+ L  +L      P+
Sbjct: 94  LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPS 153

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++ LID  CK  R ++A  +F   +  G   +V+ Y+  I G  K+  +  A  V+ 
Sbjct: 154 GSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHV 211

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E   +P+ VSY+++I  LCK   + EA      A++   +P V    +L+ G CK+ 
Sbjct: 212 KMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSR 271

Query: 182 RPTEAMQLYDSMLRNG 197
           R  EA  + + ML  G
Sbjct: 272 RVEEACVILERMLEAG 287



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 79/162 (48%)

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           L  ++    + P  +TF  LI   C+    + A  +F +M++   K +   Y+ +I    
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K   +  A   +E+M ++   P+ V+Y++L+  L K    E+    F   L     P++V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           TYA ++ GYCKAGR  +A+ L   +   G  P G L STL D
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLID 162


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 9/210 (4%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++  RGL+PD +TY T+I  YC    +  A  L  ++  + + PN +T+  LID  C
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D A  +  +M +KG + NV  Y+ +++G  K+ N++ A  + +EM    I P+ +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +ID  C+ G +++A       LD  L P VVT+ +L+ G+C  G   +  +L   M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           L  GI+PD +  +TL          ++HCI
Sbjct: 600 LEKGIVPDAITYNTLM---------KQHCI 620



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE H     +L  Q+  R   PD+++Y+T+I GYC L  L +A++L + +    LKPN 
Sbjct: 274 VKEAH-----RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  +I   CK G+  +A  +  +M+ +    + V Y+ LI G+FK  ++++A   ++E
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP+ ++Y+ LI G  + G + E    FH  +   L PD VTY  LI  YCKAG 
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L++ M++ G+ P+ +    L D
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALID 476



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A+KL  ++   G++PD ITY T+I  YC L  +D+A +L +++    L+P  +
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF +L++ FC  G ++D   +   MLEKG   + +TY+ L+  +    +M +   +Y+ M
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P+  +Y+ILI G CK   ++EA + +   ++   +P V +Y  LI+ + K  + 
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKF 694

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L++ M  +G++ DG + +   D
Sbjct: 695 XEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++  +GL+ ++  YN+++ G C    +++A++L +++    + P+
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T +IDA+C+ G +D A  +  +ML++G +  VVT++ L++G+     ++    +  
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I P+ ++Y+ L+   C R  M      +    +  + PD  TY ILI+G+CKA 
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              EA  LY  M+  G +P      T+  YN
Sbjct: 658 NLKEAWFLYKEMIEKGYVP------TVTSYN 682



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 3/196 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     ALKL   +  +GL+P+  TYN+II   C + +  EA ++  ++   ++ P++
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T LI  F K G +  A   F +ML K    + +TY+ LI G+ +   +    +++ E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ V+Y+ LID  CK G M  A    +  +   + P++VTY  LI G CK G 
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 183 PTEAMQLYDSMLRNGI 198
              A +L D M + G+
Sbjct: 484 LDTANELLDEMRKKGL 499



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 99/192 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G+ P+I+TY  +I G C    LD A +L +++    L+ N   +  +++
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G ++ A  +  +M   G   + +TY+ +ID Y +  ++  A  + +EM +  + P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +V++++L++G C  G++E+        L+  ++PD +TY  L++ +C         ++Y
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 191 DSMLRNGIMPDG 202
             M   G+ PD 
Sbjct: 632 KRMRNQGVAPDS 643



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+K+F    + G+  +  +YN II   C L ++ EA +L  ++      P+ ++++ 
Sbjct: 242 IEMAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID +C  G +  A  +   M  KG K N  TY+ +I    K      A  V  EM    
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+ V Y+ LI G  K G +  A   F   L   + PD +TY  LI+G+ + G+  E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  M+  G+ PD +  +TL D
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLID 441



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF-KSQNMKSAFD 118
           PN I F I      + G + +A  +  K+L  G    V + +  +      S+ ++ A  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+   CE  IS N  SY+I+I  LC+ G ++EA             PDVV+Y+ +I GYC
Sbjct: 248 VF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
             G   +A++L D M   G+ P+
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPN 327


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKP 60
           L +  ++  A  +  ++  +GL+P++ T+ ++I G C +  ++ A +LF KL      KP
Sbjct: 261 LCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKP 320

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T++I  +CKEG++  A M+  +M+E+G   N  TY+ LI G+ K  +   AF++ 
Sbjct: 321 NVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELM 380

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M      PNI +Y+ +I G CK+G ++EA      A    L  D VTY ILI  +CK 
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQ 440

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G  T A+ L+  M      PD
Sbjct: 441 GHITCALDLFKQMAEKSCHPD 461



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD  ++  ++ G C   R +EA  L   +       +S T T+++ AFC++GR  + 
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           T +F +M E G   N+V YS  IDG  +   +K AF V EEM    + PN+ +++ LIDG
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 142 LCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           LCK G ME A   F      +   P+V TY ++I GYCK G+   A  L   M+  G+ P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 201 DGLLLSTL 208
           +    +TL
Sbjct: 356 NTNTYTTL 363



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A  L G++ ++GL P+  TY T+I G+C     D A +L  K+      PN  
Sbjct: 334 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIY 393

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I  FCK+G++ +A  +      +G   + VTY+ LI  + K  ++  A D++++M
Sbjct: 394 TYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM 453

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E +  P+I +Y+ +I   C++  ME++   F   L   L+P   TY  +I GYC+ G+ 
Sbjct: 454 AEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKL 513

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTL 208
           T A+++++ M+++G +PD    G L+S+L
Sbjct: 514 TSALKVFERMVQHGCLPDSITYGALISSL 542



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 1/196 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++++ G  P+++ Y+  I G C    + +A  + E++    LKPN  T T LID  C
Sbjct: 238 LFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 74  KEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           K G M+ A  +F K+++    K NV TY+ +I GY K   +  A  +   M E  ++PN 
Sbjct: 298 KIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y+ LI G CK G  + A    +       LP++ TY  +I G+CK G+  EA ++   
Sbjct: 358 NTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRM 417

Query: 193 MLRNGIMPDGLLLSTL 208
               G+  D +  + L
Sbjct: 418 ATSQGLHLDKVTYTIL 433



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 106/202 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A +L  ++   G  P+I TYN II G+C   ++ EA ++    T   L  + +T+TI
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI 432

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK+G +  A  +F +M EK    ++ TY+ +I  Y + + M+ +  ++++     
Sbjct: 433 LITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P   +Y+ +I G C+ G +  AL  F   + +  LPD +TY  LI   CK  R  EA 
Sbjct: 493 LVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEAR 552

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L+++ML   ++P  +   TLA
Sbjct: 553 ALFETMLDKHLVPCDVTRVTLA 574



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 1/199 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E   + A  L   +  +G   D  T   ++  +C   R      LF +++ +   PN +
Sbjct: 193 REGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMV 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++  ID  C+ G +  A  +  +M+ KG K NV T++ LIDG  K   M+ AF ++ ++
Sbjct: 253 NYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKL 312

Query: 124 CE-NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            + ++  PN+ +Y+++I G CK G +  A       ++  L P+  TY  LI G+CK G 
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGS 372

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              A +L + M   G +P+
Sbjct: 373 FDRAFELMNKMKLEGFLPN 391



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 82/206 (39%), Gaps = 38/206 (18%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTII----------------------------- 34
           K+ H+  AL LF Q+ ++   PDI TY TII                             
Sbjct: 439 KQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498

Query: 35  ------CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                  GYC L +L  A+++FE++      P+SIT+  LI + CKE R+++A  +F  M
Sbjct: 499 TYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETM 558

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L+K      VT   L   Y +   +  A    + + +        +   L+  L   G +
Sbjct: 559 LDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QAHTADALVRKLSTVGNL 615

Query: 149 EEALYAFHCALDNHLLPDVVTYAILI 174
           + A       LD H   D  TY   I
Sbjct: 616 DAASLFLKNVLDKHYAVDHATYTSFI 641


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 9/216 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LF  L  R + PD ITY+T++CG    +RLD A+ L +++   +++P+ + +  
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 68  LIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           L+    K G  +    ++ K++ + G + N+ TY+ ++DG  K    K   +V+E M  N
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P++++Y ILI GLC+ G ++ A   +   +   L+ D   Y  L++G+C+AGR  EA
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 187 MQLYDSM----LRN----GIMPDGLLLSTLADYNLQ 214
            + +DS     LRN     IM  GL  S + D  ++
Sbjct: 354 WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 114/201 (56%), Gaps = 1/201 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R + P++ TYN ++   C+   LD AV LF+ L   Q+ P+ IT++ L+    K+ R+D 
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDH 211

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILI 139
           A  +  +M     + +VV Y+ L+ G FK+   +    V++++ ++    PN+ +Y++++
Sbjct: 212 ALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLCK G  +E    +   + N+L PDV+TY ILI G C++G    A ++Y  +++ G++
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331

Query: 200 PDGLLLSTLADYNLQSSGSQE 220
            D  + ++L     Q+   QE
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQE 352



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 1/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +F +    G + D+ +Y+++I G C++ RL +AV+++EK+     KPNS  +  L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  FC+  R  DA  ++SKM + G    V+TY+ LIDG  K++  + A  V  EM EN  
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P+I +Y  LI GL     +++AL  +   L   L  DV+ + ILI G C AG+  EA+ 
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600

Query: 189 LYDSMLRNGIMPDGLLL-STLAD 210
           ++  M      P  L+  +TL D
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMD 623



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 107/191 (56%), Gaps = 1/191 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++++ ++ D G  P +ITYNT+I G C   +  EA  +  ++      P+  T+  LI 
Sbjct: 493 AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIR 552

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NIS 129
               + ++DDA  ++ ++L KG K +V+ ++ LI G   +  +  A  V+ +M E  N  
Sbjct: 553 GLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ L+DGL + G +++A   +    ++ L PD+++Y   I+G C   R  E +QL
Sbjct: 613 PNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQL 672

Query: 190 YDSMLRNGIMP 200
            D +L  GI+P
Sbjct: 673 LDEVLSRGIIP 683



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 2/217 (0%)

Query: 8   LDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A++L+  L  D    PD +T+ T+I G C     ++A  +FE+      + +  +++
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYS 443

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  C  GR+ DA  ++ KM + G K N   Y+ LI G+ +      A  +Y +M +N
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADN 503

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SP +++Y+ LIDGLCK    +EA       ++N   PD+ TY  LIRG     +  +A
Sbjct: 504 GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDA 563

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           + ++  +L  G+  D +++  +  + L S+G  +  +
Sbjct: 564 LSIWKQILYKGLKVD-VMMHNILIHGLCSAGKVDEAL 599



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 94/166 (56%), Gaps = 1/166 (0%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G  PDI TY ++I G  S  ++D+A+ +++++    LK + +   ILI   C  G
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 77  RMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           ++D+A  +FS M EK     N+VTY+ L+DG +++  +  A  ++  + E+ + P+I+SY
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  I GLC    + E +      L   ++P V+T+ IL+R   K G
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKP 60
           L K+  LD AL L  ++    ++PD++ YN ++ G       ++ +++++KL      +P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+ +++D  CK GR  +   ++ +M+    + +V+TY  LI G  +S ++  A  VY
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E+ +  +  +   Y+ L+ G C+ G ++EA + F  +     L ++ TY I+I+G   +
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA-WKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 181 GRPTEAMQLYDSMLRN-GIMPDGLLLSTL 208
           G   EA++L+D + ++   +PD +   TL
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTL 410



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQ 57
           L  +  +D AL ++ Q+  +GL+ D++ +N +I G CS  ++DEA+ +F    EK  C  
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC-- 611

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             PN +T+  L+D   + G +D A  +++ + E G + ++++Y+  I G      +    
Sbjct: 612 -PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGI 670

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            + +E+    I P +++++IL+  + K G ++
Sbjct: 671 QLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAF----HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +P I S++ L+D   +     +A   F    H A    + P++ TY I++R  C  G   
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A+ L+DS+ R  + PD +  STL
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTL 199


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++PD++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  +  +++  G + ++V +S +I+   K   +  A ++++      
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V YS+L+DG C  G ME+AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  ML+ GI P  +L + + D
Sbjct: 594 SLFREMLQKGIKPSTILYNIIID 616



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 121/207 (58%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ PDI T++ +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 376 KGCLVDMT-DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 434

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I A C+ G+MDDA   F++M+++G   +   Y CLI G+    ++  A ++  E+
Sbjct: 435 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEI 494

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +S +I+ LCK G + +A   F   ++    PD V Y++L+ GYC  G+ 
Sbjct: 495 MNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKM 554

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ ++  TL +
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVN 581



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 113/204 (55%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  DII  N ++ G+C   R DEA+ +      +L CV   P+  +++
Sbjct: 134 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCV---PDVFSYS 190

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     +VV Y+ +ID +FK  ++  A D+++EM 
Sbjct: 191 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMV 250

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++V+YS ++  LCK   M +A       ++  +LPD  TY  LI GY   G+  
Sbjct: 251 QRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 310

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R+ I+PD + L+ L
Sbjct: 311 EAVRVFKEMRRHSILPDVVTLNML 334



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A     Q+ ++G+ PD  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  +L+ + CK G++ +A  +F  M  KG   +V +Y  +++GY     +    D+++
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P+I ++S+LI      G++++A+  F+   D+ + PDVVTY  +I   C+ G
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G+ PD
Sbjct: 448 KMDDAMEKFNQMIDQGVAPD 467



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 109/190 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F    + G  PD + Y+ ++ GYC + ++++A+++F+ +    ++PN + +  L++
Sbjct: 522 AQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK GR+D+   +F +ML+KG K + + Y+ +IDG F +     A   + EM E+ I+ 
Sbjct: 582 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAI 641

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+I++ G  K    +EA++ F      ++  D++T   +I G  +  R  EA  L+
Sbjct: 642 NKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701

Query: 191 DSMLRNGIMP 200
            S+ R+G++P
Sbjct: 702 ASISRSGLVP 711



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++    + PD++T N ++   C   ++ EA  +F+ +      P+  ++ I+++
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  +G + D T +F  ML  G   ++ T+S LI  Y     +  A  ++ EM ++ + P
Sbjct: 372 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKP 431

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ +I  LC+ G M++A+  F+  +D  + PD   Y  LI+G+C  G   +A +L 
Sbjct: 432 DVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 491

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ++ NG+  D +  S++
Sbjct: 492 LEIMNNGMRLDIVFFSSI 509



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 111/210 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ +++II   C L R+ +A  +F+    V   P+++ +++L+D
Sbjct: 487 AKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMD 546

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + NVV Y  L++GY K   +     ++ EM +  I P
Sbjct: 547 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 606

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+I+IDGL   G    A   FH   ++ +  +  TY I++RG+ K     EA+ L+
Sbjct: 607 STILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLF 666

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  D + L+T+     Q+   +E
Sbjct: 667 KELRAMNVKIDIITLNTMIAGMFQTRRVEE 696



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 98/185 (52%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            PD++ Y T+I  +     +++A  LF+++    + P+ +T++ ++ A CK   M  A  
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEA 279

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
              +M+ KG   +  TY+ LI GY  +   K A  V++EM  ++I P++V+ ++L+  LC
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI PD  
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399

Query: 204 LLSTL 208
             S L
Sbjct: 400 TFSVL 404



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 94/162 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I + I
Sbjct: 554 MEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 613

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID     GR   A + F +M E G   N  TY+ ++ G+FK++    A  +++E+   N
Sbjct: 614 IIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMN 673

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           +  +I++ + +I G+ +   +EEA   F     + L+P VVT
Sbjct: 674 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N V ++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++  +         L PD +TY  LI G CK G  
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDL 333

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 334 DTAFEHRKQMIQENIRLDEVAYTAL 358



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 109/195 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN + FT 
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTT 252

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K    + +EM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG 312

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 188 QLYDSMLRNGIMPDG 202
           ++   ML  G+ PD 
Sbjct: 373 KMLREMLNVGLKPDA 387



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ + + T+I G+C   R+D A+++++++    L P+
Sbjct: 222 LCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +     +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + NI  + V+Y+ LI GLC+ G   +A       L+  L PD  TY ++I  +CK G
Sbjct: 342 QMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHVP------SVVTYNVLMNG 431



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V ++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +   L D M   G+ PD +  +TL D
Sbjct: 297 DLKQVHHLIDEMSMKGLKPDKITYTTLID 325



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  Y+E+
Sbjct: 74  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 133

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            E  +L  +ML +G+ PD    S L +
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLIN 220


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 38/234 (16%)

Query: 6   CHLDAALKLFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C   A  + FG    + D GL PD  TY  +I G C   R +EA  L ++++C +LKPN 
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 349

Query: 63  ITFTILIDAF-----------------------------------CKEGRMDDATMMFSK 87
           + +  LID F                                   CK G+MD A+++  +
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+    + + +TY+ +I+G+F+  + K AF +  EM    ISPN+ +YSI+I GLC+ G 
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            E+A           L P+   YA LI GYC+ G  + A +++D M +  ++PD
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ + K F Q+ +RGL P+  TY+ +I GY     L+ A QL +++    LKPN
Sbjct: 534 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 593

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG----------------------------- 92
            + +  L++++ K   ++  +  F  ML++G                             
Sbjct: 594 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 653

Query: 93  ------PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                    +V  YS LI G  K+ + + AF + +EM +  + PNIV Y+ LIDGLCK G
Sbjct: 654 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 713

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +  A   F+  L   L+P+ VTY  LI G CK G  + A  LY+ ML  GI PD  + S
Sbjct: 714 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 773

Query: 207 TL 208
            L
Sbjct: 774 VL 775



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 107/203 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  L  Q+      PD ITYN II G+   +   +A +L  ++    + PN
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I   C+ G  + A+ +  +M  KG K N   Y+ LI GY +  N+  A ++++
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 513

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + N+ P++  Y+ LI GL K G +EE+   F    +  LLP+  TY+ LI GY K G
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573

Query: 182 RPTEAMQLYDSMLRNGIMPDGLL 204
               A QL   ML  G+ P+ ++
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVI 596



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 115/220 (52%), Gaps = 5/220 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E + D A K+  ++   G++P+ ITY+ ++ G C + ++D A  L +++     +P+
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+ ++I+   +     DA  + S+M   G   NV TYS +I G  +S   + A D+ E
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN   Y+ LI G C+ G +  A   F      ++LPD+  Y  LI G  K G
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 182 RPTEAMQLYDSMLRNGIMPD-----GLLLSTLADYNLQSS 216
           R  E+ + +  M   G++P+     GL+   L + +L+S+
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 578



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++AA ++   +   G  PD+  Y+++I G C     ++A  + ++++   + PN + + 
Sbjct: 644 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 703

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK G +  A  +F+ +L KG   N VTY+ LIDG  K  ++ +AF +Y EM   
Sbjct: 704 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 763

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            I+P+   YS+L  G    G +E+A++      L  H    + ++  L+ G+CK G+  E
Sbjct: 764 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQE 821

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
            ++L   ++  G++P+ L +  +
Sbjct: 822 TLKLLHVIMGRGLVPNALTIENI 844



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 106/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  A ++F ++T   + PD+  YN++I G   + R++E+ + F ++    L PN  
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI  + K G ++ A  +  +ML+ G K N V Y  L++ YFKS +++     ++ M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +  +   Y ILI  L   G ME A         N  +PDV  Y+ LI G CK    
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A  + D M + G+ P+ +  + L D
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALID 707



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  L  ++T +GL+P+   Y  +I GYC    +  A ++F+K+T V + P+   +  L
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I    K GR++++T  F++M E+G   N  TYS LI GY K+ +++SA  + + M +  +
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN V Y  L++   K   +E+    F   LD  ++ D   Y ILI     +G    A +
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +   + +NG +PD  + S+L
Sbjct: 651 VLSGIEKNGSVPDVHVYSSL 670



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 1/210 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+ P++ TY+ +I G C     ++A  L E++T   LKPN+  +  LI 
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+EG +  A  +F KM +     ++  Y+ LI G  K   ++ +   + +M E  + P
Sbjct: 498 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 557

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +YS LI G  K G +E A       LD  L P+ V Y  L+  Y K+    +    +
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            SML  G+M D  +   L  +NL SSG+ E
Sbjct: 618 KSMLDQGVMLDNRIYGILI-HNLSSSGNME 646



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 1/189 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A  +  +++ +G++P+I+ YN +I G C    +  A  +F  +    L PN
Sbjct: 674 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 733

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID  CK G + +A  ++++ML  G   +   YS L  G   + +++ A  + E
Sbjct: 734 CVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIE 793

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       +I S++ L+DG CKRG M+E L   H  +   L+P+ +T   +I G  +AG
Sbjct: 794 EMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 852

Query: 182 RPTEAMQLY 190
           + +E   ++
Sbjct: 853 KLSEVHTIF 861



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 6/208 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++   + DRG+ P I   N ++      + +    ++ E +    + P+  
Sbjct: 186 KSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 245

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+A+CK    D A  +  +M E+G   N VTY+ LI G  +S  ++ AF   ++M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA---LYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +  + P+  +Y  LI+GLCK     EA   L    CA    L P+VV YA LI G+ + 
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA---ELKPNVVVYANLIDGFMRE 362

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA ++   M+  G+ P+ +    L
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNL 390



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F  + D+G+  D   Y  +I    S   ++ A ++   +      P+   ++ LI   CK
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 676

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
               + A  +  +M +KG   N+V Y+ LIDG  KS ++  A +V+  +    + PN V+
Sbjct: 677 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 736

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ LIDG CK G +  A Y ++  L   + PD   Y++L  G   AG   +AM L + M 
Sbjct: 737 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 796

Query: 195 RNG 197
             G
Sbjct: 797 LRG 799



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 37/190 (19%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+D + K GR+ DA  +   M ++G   ++   + L+    ++  M   + V E M   
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 127 NISPNIVSYSILID-----------------------------------GLCKRGLMEEA 151
            ISP++ +YS LI+                                   GLC+ G +EEA
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 152 LYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + F   ++++ L+PD  TY  LI G CK+ R  EA  L D M    + P+ ++ + L D
Sbjct: 299 -FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 211 YNLQSSGSQE 220
             ++   + E
Sbjct: 358 GFMREGNADE 367



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 26/218 (11%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A+ L  ++  RG    I ++N ++ G+C   ++ E ++L   +    L PN++T   
Sbjct: 785 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I    + G++ +   +F ++ +K  ++    +S L          K   DV ++M  ++
Sbjct: 844 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG--KIPLDVVDDMIRDH 901

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
                          CK G +++AL      +         +Y  ++   C+ G+ +EA+
Sbjct: 902 ---------------CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 946

Query: 188 QLYDSMLRNGIMPDG---LLLSTLADYNLQSSGS-QEH 221
            L   M + GI P     L+L T    NL +SG  QEH
Sbjct: 947 NLLKEMDKRGICPSENQCLILLT----NLHTSGYIQEH 980



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 22/178 (12%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +   LKL   +  RGL P+ +T   II G     +L E   +F +L     +  + 
Sbjct: 815 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 874

Query: 64  TFTIL------------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
            F+ L                  I   CKEG +D A M+   ++ K       +Y  ++D
Sbjct: 875 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 934

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
              +   +  A ++ +EM +  I P+     IL+  L   G ++E     +  LDN L
Sbjct: 935 NLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQE----HNTVLDNML 988


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 9/210 (4%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++  RGL+PD +TY T+I  YC    +  A  L  ++  + + PN +T+  LID  C
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D A  +  +M +KG + NV  Y+ +++G  K+ N++ A  + +EM    I P+ +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +ID  C+ G +++A       LD  L P VVT+ +L+ G+C  G   +  +L   M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           L  GI+PD +  +TL          ++HCI
Sbjct: 600 LEKGIVPDAITYNTLM---------KQHCI 620



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE H     +L  Q+  R   PD+++Y+T+I GYC L  L +A++L + +    LKPN 
Sbjct: 274 VKEAH-----RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  +I   CK G+  +A  +  +M+ +    + V Y+ LI G+FK  ++++A   ++E
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ISP+ ++Y+ LI G  + G + E    FH  +   L PD VTY  LI  YCKAG 
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L++ M++ G+ P+ +    L D
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALID 476



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 118/207 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A+KL  ++   G++PD ITY T+I  YC L  +D+A +L +++    L+P  +
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF +L++ FC  G ++D   +   MLEKG   + +TY+ L+  +    +M +   +Y+ M
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++P+  +Y+ILI G CK   ++EA + +   ++   +P V +Y  LI+ + K  + 
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKI 694

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA +L++ M  +G++ DG + +   D
Sbjct: 695 LEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A +L  ++  +GL+ ++  YN+++ G C    +++A++L +++    + P+
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T +IDA+C+ G +D A  +  +ML++G +  VVT++ L++G+     ++    +  
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I P+ ++Y+ L+   C R  M      +    +  + PD  TY ILI+G+CKA 
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              EA  LY  M+  G +P      T+  YN
Sbjct: 658 NLKEAWFLYKEMIEKGYVP------TVTSYN 682



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 3/196 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL     ALKL   +  +GL+P+  TYN+II   C + +  EA ++  ++   ++ P++
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T LI  F K G +  A   F +ML K    + +TY+ LI G+ +   +    +++ E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ V+Y+ LID  CK G M  A    +  +   + P++VTY  LI G CK G 
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 183 PTEAMQLYDSMLRNGI 198
              A +L D M + G+
Sbjct: 484 LDTANELLDEMRKKGL 499



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 99/192 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G+ P+I+TY  +I G C    LD A +L +++    L+ N   +  +++
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G ++ A  +  +M   G   + +TY+ +ID Y +  ++  A  + +EM +  + P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +V++++L++G C  G++E+        L+  ++PD +TY  L++ +C         ++Y
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 191 DSMLRNGIMPDG 202
             M   G+ PD 
Sbjct: 632 KRMRNQGVAPDS 643



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+K+F    + G+  +  +YN II   C L ++ EA +L  ++      P+ ++++ 
Sbjct: 242 IEMAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID +C  G +  A  +   M  KG K N  TY+ +I    K      A  V  EM    
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+ V Y+ LI G  K G +  A   F   L   + PD +TY  LI+G+ + G+  E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  M+  G+ PD +  +TL D
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLID 441



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF-KSQNMKSAFD 118
           PN I F I      + G + +A  +  K+L  G    V + +  +      S+ ++ A  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+   CE  IS N  SY+I+I  LC+ G ++EA             PDVV+Y+ +I GYC
Sbjct: 248 VF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
             G   +A++L D M   G+ P+
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPN 327


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 116/226 (51%), Gaps = 8/226 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L  ++      PD++ +  +I G C   RLDEA  + E+      +P+
Sbjct: 19  LCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPD 75

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ + ID  CK  R+DDA  +  KM EK      VTY+ L+DG  K+  +  A  + E
Sbjct: 76  YVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILE 135

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E   SP + +Y+++IDGL K G +EEA   F   L N   PD   Y  LI G  K G
Sbjct: 136 QMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIG 195

Query: 182 RPTEAMQLYDSMLRN----GIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  EA+   + M+ N    G+ PD +++  L    L +SG+ E  +
Sbjct: 196 KLDEALVYLNQMVENGCARGVEPD-VVIHNLVIRQLCASGNLEDAL 240



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   LD AL    +  +RG  PD +TY +II G C L R++E  + F ++     +P+
Sbjct: 299 FLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD 358

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LID F K   +  A  ++ +ML+ G   + VTY+ ++DG  K+  +  A+  + 
Sbjct: 359 AVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFL 418

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E      +V+YS L+DG C  G +  A+  F   LD    P++V+Y I+IRG C+AG
Sbjct: 419 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAG 478

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A   ++ +L+  + PD
Sbjct: 479 KLAKAYFYFEKLLQRRLCPD 498



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 2/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A   F  + +RG    ++TY+ ++ G+CS   +  AV+LF ++     +PN
Sbjct: 404 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDVY 120
            +++ I+I   C+ G++  A   F K+L++    +V T++  + G  +    +    +++
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELF 523

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M     SPN+ SYSIL+DG+C+ G +E  L  FH  +   + PDVV +  LIR  C A
Sbjct: 524 ESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIA 583

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  EA++++  + R    PD     +L D
Sbjct: 584 GRVDEALEVFRELERRS-APDAWSYWSLLD 612



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 105/191 (54%), Gaps = 4/191 (2%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + DR L  D      ++ G C   +LD A+ L +++ C    P+ + FT++I+  C+E R
Sbjct: 1   MIDRKL-VDTRVCTALLNGLCKTGQLDRAMLLLDEMPC---SPDMVAFTVVINGLCREKR 56

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +D+A  +  + +  G + + VTY+  IDG  K++ +  AF + ++M E    P  V+Y+ 
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+DGL K G ++EA+      ++    P + TY ++I G  KAGR  EA +++  ML NG
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 198 IMPDGLLLSTL 208
             PD  + + L
Sbjct: 177 CRPDAFVYTAL 187



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ AL  F +L D  L+    T+N ++   C   R +EA+   +K++  +  P   T+T
Sbjct: 235 NLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYT 293

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D F K GR+D+A +   + +E+G   + VTY+ +IDG  K   ++   + + EM   
Sbjct: 294 SLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 353

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+Y+ LIDG  K  ++ +A   +   L +  +   VTY I++ G CKAGR  EA
Sbjct: 354 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
              + +M   G +   +  S L D
Sbjct: 414 YATFLAMEERGCVATVVTYSALMD 437



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 114/225 (50%), Gaps = 5/225 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   LD A+ +  Q+ ++G  P + TY  +I G     R++EA ++F  +     +P+
Sbjct: 121 LLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 180

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE----KGPKANVVTYSCLIDGYFKSQNMKSAF 117
           +  +T LI    K G++D+A +  ++M+E    +G + +VV ++ +I     S N++ A 
Sbjct: 181 AFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDAL 240

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             ++E+ ++++     +++ L+  LCK    EEA+       +    P + TY  L+ G+
Sbjct: 241 AYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF 299

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            K GR  EA+      +  G +PD +  +++ D   +    +E C
Sbjct: 300 LKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 344



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 40/193 (20%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E ++ AA++LF ++ DRG EP++++YN II G C   +L +A   FEKL   +L P+  T
Sbjct: 442 EGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYT 501

Query: 65  FTILIDAFCKEGRMD---DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           F   +   C+  R+D   D   +F  M+ +G   N+ +YS L+DG  ++  ++   +++ 
Sbjct: 502 FNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFH 559

Query: 122 EMCENNISPNIV----------------------------------SYSILIDGLCKRGL 147
           EM    ++P++V                                  SY  L+D L +   
Sbjct: 560 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCER 619

Query: 148 MEEA-LYAFHCAL 159
           MEEA L +FH  L
Sbjct: 620 MEEARLLSFHMKL 632


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 114/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T   L P ++++NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 148 KEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD+A  M ++ML+ G   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 208 TYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++++Y+ LI GLC+RG + +A       +   L PD +TY  LI G CK G  
Sbjct: 268 LSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
               +L   M+R  I  D +  + L
Sbjct: 328 EITFELRKRMIRENIRLDEVTYTAL 352



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++DEA ++  ++    L PN 
Sbjct: 182 IRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK G++D A  ++ +ML +G   +++TY+ LI G  +  ++  A D+ EE
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E         +  ++  D VTY  LI G C+ GR
Sbjct: 302 MIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 362 AGDAEKMLREMLTVGLKPD 380



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 110/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A ++  ++ D GL P+ +T+ T+I G+C   ++D A+++++++      P+
Sbjct: 216 LCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   C+ G +  A  +  +M+ KG K + +TY+ LIDG  K  +++  F++ +
Sbjct: 276 LITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY +++  +CK G
Sbjct: 336 RMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTG 395

Query: 182 RPTEAMQLYDSMLRNGIMP 200
               A +L   M RNG +P
Sbjct: 396 DVKTASKLLREMQRNGPVP 414



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G  P +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 111 LMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPS 170

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++F  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++  
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLN 230

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N + PN V+++ LIDG CK G ++ A+  +   L    LPD++TY  LI G C+ G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRG 290

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L + M+  G+ PD +  +TL D
Sbjct: 291 DLGQARDLVEEMIMKGLKPDKITYTTLID 319



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 89/166 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A++++ Q+  +G  PD+ITYNT+I G C    L +A  L E++    LKP+ I
Sbjct: 253 KNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKI 312

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  CKEG ++    +  +M+ +  + + VTY+ LI G  +      A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREM 372

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
               + P+  +Y+++++  CK G ++ A         N  +P VVT
Sbjct: 373 LTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 73/133 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  A  L  ++  +GL+PD ITY T+I G C    L+   +L +++    ++ +
Sbjct: 286 LCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI   C+EGR  DA  M  +ML  G K +  TY+ +++ + K+ ++K+A  +  
Sbjct: 346 EVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLR 405

Query: 122 EMCENNISPNIVS 134
           EM  N   P +V+
Sbjct: 406 EMQRNGPVPGVVT 418



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 39/183 (21%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC--LIDGYFKSQNMKSAFDVYEE 122
           F+ L+ A+ + G + DA   F   L K  K  V   +C  +++   K +  +  +  Y+E
Sbjct: 69  FSGLMLAYLESGFVRDAIQCFR--LTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKE 126

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHLL--- 164
           + E    P++  ++IL+   CK G M  A               + +F+  ++ ++    
Sbjct: 127 ILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGD 186

Query: 165 -----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                            PDV TY++LI G CK  +  EA ++ + ML NG++P+G+  +T
Sbjct: 187 LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTT 246

Query: 208 LAD 210
           L D
Sbjct: 247 LID 249


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R  EA                 
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N V+Y+ ++ G   +     A ++  +M +    PN V+++ LI+ LCK+GL+
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ ++ S++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 209 A 209
           A
Sbjct: 538 A 538



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 115/197 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+   G  PD+ITY T+I G+C    +DEAV L + ++    KPN++++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C  GR  DA  + S+M+++G   N VT++ LI+   K   ++ A ++ ++M  N 
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  EEAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 188 QLYDSMLRNGIMPDGLL 204
           Q++D++    I  D +L
Sbjct: 552 QMFDNIKDTTIRSDAVL 568



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 109/199 (54%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  Q+++ G  PDI  Y TII G C    L+ A ++  ++    LKPN + +  ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C   R  +A  + S+M +K    + VT++ L+D + ++  +    ++ E+M  +   P++
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           ++Y+ +I+G CK GL++EA+            P+ V+Y I+++G C AGR  +A +L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M++ G  P+ +  +TL ++
Sbjct: 452 MIQQGCPPNPVTFNTLINF 470



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A+ L   ++  G +P+ ++Y  ++ G CS  R  +A +L  ++      PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+  CK+G ++ A  +  +ML  G   ++++YS +IDG  K+   + A ++   M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISPN + YS +   L + G + + +  F    D  +  D V Y  +I   CK    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A+  +  M+ NG MP+
Sbjct: 583 DRAIDFFAYMVSNGCMPN 600



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  +L   G E DI++YN ++ G C   R  +  +L +++  V   PN +TF  
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 68  L-----------------------------------IDAFCKEGRMDDATMMFSKMLEKG 92
           L                                   ID  CKEG ++ A  + ++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            K NVV Y+ ++ G   ++  K A ++  EM + +   + V+++IL+D  C+ GL++  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 L +  +PDV+TY  +I G+CK G   EA+ L  SM   G  P+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K      A D + 
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  N   PN  +Y++LI GL   GL +EA
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  +++ +G  P    Y+ I+   C       +V++ E +       ++    ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G +D+A  +  K+   G +A++V+Y+ ++ G   ++      ++ +EM   + +P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E          ++   PD+  YA +I G CK G    A ++ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +T+
Sbjct: 310 NRMPSYGLKPNVVCYNTV 327



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN ++ GYC   R  +          V + PN+ TF  ++   C  GR+ DA  +  
Sbjct: 79  VVAYNAMVAGYC---RAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  KG       Y  +++   +S   +++  V E M     + +  + +++++ +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 147 LMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            ++EA      L  F C        D+V+Y  +++G C A R  +  +L D M+R    P
Sbjct: 196 CVDEAVGLLRKLAFFGCE------ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 201 DGLLLSTLADY 211
           + +  +TL  Y
Sbjct: 250 NIVTFNTLIGY 260



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 60/116 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL+L   + ++G+ P+ I Y++I C      R+++ +Q+F+ +    ++ +++ +  +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           I + CK    D A   F+ M+  G   N  TY+ LI G       K A ++  E+C
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 42/91 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++  +++F  + D  +  D + YN +I   C     D A+  F  +      PN
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T+LI     EG   +A  + S++  +G
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R  EA                 
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N V+Y+ ++ G   +     A ++  +M +    PN V+++ LI+ LCK+GL+
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ ++ S++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 209 A 209
           A
Sbjct: 538 A 538



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+   G  PD+ITY T+I G+C    +DEAV L + ++    KPN++++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C  GR  DA  + S+M+++G   N VT++ LI+   K   ++ A ++ ++M  N 
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  EEAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q++D++    I  D +L + +
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAV 572



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 109/199 (54%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  Q+++ G  PDI  Y TII G C    L+ A ++  ++    LKPN + +  ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C   R  +A  + S+M +K    + VT++ L+D + ++  +    ++ E+M  +   P++
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           ++Y+ +I+G CK GL++EA+            P+ V+Y I+++G C AGR  +A +L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M++ G  P+ +  +TL ++
Sbjct: 452 MIQQGCPPNPVTFNTLINF 470



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 4/220 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A+ L   ++  G +P+ ++Y  ++ G CS  R  +A +L  ++      PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+  CK+G ++ A  +  +ML  G   ++++YS +IDG  K+   + A ++   M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISPN + YS +   L + G + + +  F    D  +  D V Y  +I   CK    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 219
             A+  +  M+ NG MP+     +L+  LA   L     +
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  +L   G E DI++YN ++ G C   R  +  +L +++  V   PN +TF  
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 68  L-----------------------------------IDAFCKEGRMDDATMMFSKMLEKG 92
           L                                   ID  CKEG ++ A  + ++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            K NVV Y+ ++ G   ++  K A ++  EM + +   + V+++IL+D  C+ GL++  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 L +  +PDV+TY  +I G+CK G   EA+ L  SM   G  P+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K      A D + 
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  N   PN  +Y++LI GL   GL +EA
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  +++ +G  P    Y+ I+   C       +V++ E +       ++    ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G +D+A  +  K+   G +A++V+Y+ ++ G   ++      ++ +EM   + +P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E          ++   PD+  YA +I G CK G    A ++ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +T+
Sbjct: 310 NRMPSYGLKPNVVCYNTV 327



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN ++ GYC   R  +          V + PN+ TF  ++   C  GR+ DA  +  
Sbjct: 79  VVAYNAMVAGYC---RAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  KG       Y  +++   +S   +++  V E M     + +  + +++++ +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 147 LMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            ++EA      L  F C        D+V+Y  +++G C A R  +  +L D M+R    P
Sbjct: 196 CVDEAVGLLRKLAFFGCE------ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 201 DGLLLSTLADY 211
           + +  +TL  Y
Sbjct: 250 NIVTFNTLIGY 260



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 62/123 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL+L   + ++G+ P+ I Y++I C      R+++ +Q+F+ +    ++ +
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  +I + CK    D A   F+ M+  G   N  TY+ LI G       K A ++  
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 122 EMC 124
           E+C
Sbjct: 626 ELC 628



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 42/91 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++  +++F  + D  +  D + YN +I   C     D A+  F  +      PN
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+T+LI     EG   +A  + S++  +G
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 117/195 (60%), Gaps = 2/195 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAAL+L  ++   G++P+++ Y+ ++ GYC   R  +  ++FE ++   +KP+ I FT
Sbjct: 173 ELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFT 232

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CKEG+   A  +   M+++G + NVVTY+ LI+   K  +++ A  + +EM + 
Sbjct: 233 GLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDK 292

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRPT 184
            ++P++V+Y+ LI GL     M+EA+      +  D  + PDVVT+  +I G CK GR T
Sbjct: 293 GVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMT 352

Query: 185 EAMQLYDSMLRNGIM 199
           +A+++ + M   G M
Sbjct: 353 QAVKVREMMAERGCM 367



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 95/185 (51%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P+ ++Y T++ G C+  R  EAV L   +    ++ + +T+  LI   C    +D A  
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M   G + NVV YSCL+ GY +S   +    V+E+M    I P+++ ++ LID LC
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G   +A       +   L P+VVTY +LI   CK G   EA+ L   M   G+ PD +
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 204 LLSTL 208
             +TL
Sbjct: 300 TYNTL 304



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 99/186 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L   +   G+  D++TY T+I G C  + LD A++L +++    ++PN + ++ L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ GR  D   +F  M  +G K +V+ ++ LID   K      A  V + M +  + P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y++LI+ LCK G + EAL       D  + PDVVTY  LI G        EAM   
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 191 DSMLRN 196
           + M++ 
Sbjct: 322 EEMIQG 327



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+K+   + +RG   +++TYN +I G+  ++++  A+ L ++L    L+P+
Sbjct: 345 LCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPD 404

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T++ILI+ F K   +D A      M ++G KA +  Y  L+    +   M+ A  ++ 
Sbjct: 405 SFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFN 464

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + N   + ++YS +I G CK G M+         LD  L PD VTY++LI  Y K G
Sbjct: 465 EM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLG 523

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA ++   M  +G +PD  +  +L
Sbjct: 524 DLEEAERVLKQMTASGFVPDVAVFDSL 550



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 73/279 (26%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPD----------------------------------- 26
           L KE     A K+   +  RGLEP+                                   
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTC--VQLKPNSITFTILIDAFCKEGRMDDATMM 84
           ++TYNT+I G   +  +DEA+   E++      ++P+ +TF  +I   CK GRM  A  +
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG--- 141
              M E+G   N+VTY+ LI G+ +   +K A ++ +E+  + + P+  +YSILI+G   
Sbjct: 358 REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417

Query: 142 --------------------------------LCKRGLMEEALYAFHCALDNHLLPDVVT 169
                                           +C++G+ME A+  F+  +D +   D + 
Sbjct: 418 MWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFN-EMDKNCGLDAIA 476

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           Y+ +I G CK+G      QL   ML  G+ PD +  S L
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSML 515



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 5/181 (2%)

Query: 26  DIITYNTIICGYCSL--NRLDEAVQLFEKLTC---VQLKPNSITFTILIDAFCKEGRMDD 80
           D ++YNT++   C    + L +A  L   ++       +PN++++T ++   C   R  +
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +   M   G +A+VVTY  LI G   +  + +A ++ +EMC + + PN+V YS L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G  ++    F       + PDV+ +  LI   CK G+  +A ++ D M++ G+ P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 201 D 201
           +
Sbjct: 262 N 262



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  +L   GLEPD  TY+ +I G+  +  +D A +    +    +K     +  L+ 
Sbjct: 389 AMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLA 448

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G M+ A  +F++M +K    + + YS +I G  KS +MK+   + ++M +  ++P
Sbjct: 449 AMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAP 507

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+YS+LI+   K G +EEA         +  +PDV  +  LI+GY   G+  + ++L 
Sbjct: 508 DAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLI 567

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M    +  D  ++ST+
Sbjct: 568 HEMRAKNVAFDPKIISTI 585



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 8/171 (4%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEG----RMDDATMM-FSKMLEKGPKANVVT 99
           EA  L   L  V+   +++++  ++ A C+ G    R   + ++  S+      + N V+
Sbjct: 69  EACSLLSALPDVR---DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVS 125

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y+ ++ G   S+    A  +   M  + +  ++V+Y  LI GLC    ++ AL       
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC 185

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + + P+VV Y+ L+RGYC++GR  +  ++++ M R GI PD ++ + L D
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLID 236


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 124/208 (59%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E H      L+ ++   G+ PD++T ++I+ G+C   +L EA  LF ++  + L PN 
Sbjct: 337 VEESH-----SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNH 391

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  +I++  K GR+ +A  + S+M+ +G   ++VT + ++DG FK    K A +V+E 
Sbjct: 392 VSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET 451

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + + N++PN V+YS L+DG CK G ME A          H+ P+V+T++ +I GY K G 
Sbjct: 452 ILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 511

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A+ +   M++  +MP+ ++ + L D
Sbjct: 512 LSKAVDVLREMVQRNVMPNTIVYAILID 539



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L  Q+  RG+  DI+T  T++ G   + +  EA ++FE +  + L PN
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+D +CK G+M+ A ++  KM ++    NV+T+S +I+GY K   +  A DV  
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + N+ PN + Y+ILIDG  K G  + A           L    V + IL+    + G
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 580

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L   M   GI PD +  ++L D
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLID 609



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 110/190 (57%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           + L+P ++TY T+I  YC    ++E+  L++K+    + P+ +T + ++  FC+ G++ +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A ++F +M E G   N V+Y+ +I+  FKS  +  AF++  +M    IS +IV+ + ++D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GL K G  +EA   F   L  +L P+ VTY+ L+ GYCK G+   A  +   M +  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 201 DGLLLSTLAD 210
           + +  S++ +
Sbjct: 495 NVITFSSIIN 504



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A+ +  ++  R + P+ I Y  +I GY      D A    +++   +L+ +++
Sbjct: 508 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 567

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F IL++   + GRMD+A  +   M  KG   ++V Y+ LIDGYFK  N  +A  + +EM
Sbjct: 568 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 627

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E NI  ++V+Y+ LI GL + G  +   Y     ++  L PD +TY  +I  YC  G+ 
Sbjct: 628 KEKNIRFDVVAYNALIKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKT 686

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A+ + + M   GIMP+ +  + L
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNIL 711



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 98/192 (51%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + GL PD ITYNTII  YC   + ++A+ +  ++    + PN++T+ ILI   CK G
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            ++ A     +ML        +T+  L+  Y +S+       ++E++  + +  ++  Y+
Sbjct: 720 AVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYN 779

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI   C+ G+  +A       +   +  D+VTY  LIRGYC      +A++ Y  M  +
Sbjct: 780 TLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 839

Query: 197 GIMPDGLLLSTL 208
           GI P+    +TL
Sbjct: 840 GIAPNITTYNTL 851



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 101/178 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  A  LF ++ + GL+P+ ++Y TII       R+ EA  L  ++    +  + +
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T ++D   K G+  +A  +F  +L+     N VTYS L+DGY K   M+ A  V ++M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++ PN++++S +I+G  K+G++ +A+      +  +++P+ + YAILI GY KAG
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            L D G+  D+I  NT+I GYC    + +A +L E      +K + +T+  L+ AFCK G
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG 281

Query: 77  RMDDATMMFSKMLE-------------------KGPKANVVTYSCLIDGYFKSQNMKSAF 117
            +  A  +F+++L                    K  +  +VTY+ LI  Y K   ++ + 
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +Y++M  N I P++V+ S ++ G C+ G + EA   F    +  L P+ V+YA +I   
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            K+GR  EA  L   M+  GI  D +  +T+ D   +   ++E
Sbjct: 402 FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 45/242 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA------------------------ 46
           AL +  ++   G+ P+ +TYN +I G C    +++A                        
Sbjct: 689 ALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVK 748

Query: 47  -----------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                      +Q+ EKL    L+ +   +  LI  FC+ G    A ++  +M+++G  A
Sbjct: 749 AYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISA 808

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++VTY+ LI GY    +++ A   Y +M  + I+PNI +Y+ L+ GL   GLMEE +   
Sbjct: 809 DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEET 868

Query: 156 HCAL----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              +    +  L+P+  TY IL+ GY + G   + + L+  M+  G +P      TL  Y
Sbjct: 869 EKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP------TLKTY 922

Query: 212 NL 213
           N+
Sbjct: 923 NV 924



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 102/192 (53%), Gaps = 1/192 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  L   +  +G++PDI+ Y ++I GY        A+ + +++    ++ + + + 
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYN 640

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    + G+ D    + S+M+E G   + +TY+ +I+ Y      + A D+  EM   
Sbjct: 641 ALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY 699

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN V+Y+ILI GLCK G +E+A  A    L    +P  +T+  L++ Y ++ +  + 
Sbjct: 700 GIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKI 759

Query: 187 MQLYDSMLRNGI 198
           +Q+++ ++ +G+
Sbjct: 760 LQIHEKLVASGL 771



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 19/232 (8%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D    L  ++  RGL  D IT N ++ GYC +  +  A  +   L    +  + I    
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-- 125
           LID +C+ G M  AT +         K ++VTY+ L+  + K+ ++  A  ++ E+    
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 126 -----------------NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
                             N+ P +V+Y+ LI   CK   +EE+   +   + N ++PDVV
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           T + ++ G+C+ G+ TEA  L+  M   G+ P+ +  +T+ +   +S    E
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 409



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L++  +L   GLE  +  YNT+I  +C L    +A  + +++    +  + +T+  L
Sbjct: 757 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 816

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY----FKSQNMKSAFDVYEEMC 124
           I  +C    ++ A   +S+M   G   N+ TY+ L+ G        + M+    +  EM 
Sbjct: 817 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 876

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E  + PN  +Y IL+ G  + G  ++ +      +    +P + TY +LI  Y K+G+  
Sbjct: 877 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 936

Query: 185 EAMQLYDSMLRNGIMPDGL 203
           EA +L + +L  G +P+  
Sbjct: 937 EARELLNDLLTKGRIPNSF 955



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 93/173 (53%), Gaps = 2/173 (1%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD+ + N ++   C +  LD A+        V +  +++T+  +I  FC++G +D  
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQG 181

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S+M+++G   + +T + L+ GY +   ++ A  V   + +  ++ +++  + LIDG
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            C+ GLM +A      +  + +  D+VTY  L++ +CK G  T A  L++ +L
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 4/165 (2%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  RG+  D++TYN +I GYC+ + +++A++ + ++    + PN  T+  L+      G
Sbjct: 800 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 859

Query: 77  ----RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
                M++   + S+M E+G   N  TY  L+ GY +  N K    ++ EM      P +
Sbjct: 860 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 919

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +Y++LI    K G M EA    +  L    +P+  TY IL  G+
Sbjct: 920 KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 964



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 6/204 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
               A   F  +   GL P +  +NT++  + +   + +   ++  +    + P+  +  
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVN 133

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANV--VTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +L+ + CK G +D A       L      ++  VTY+ +I G+ +   +   F +  EM 
Sbjct: 134 VLVHSLCKVGDLDLAL----GYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMV 189

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  +  + ++ +IL+ G C+ GL++ A +  +  +D  +  DV+    LI GYC+AG  +
Sbjct: 190 KRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMS 249

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +A +L ++  R+ +  D +  +TL
Sbjct: 250 QATELIENSWRSDVKIDIVTYNTL 273



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 4/139 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN----RLDEAVQLFEKLTCVQLKPNS 62
           H++ ALK + Q+   G+ P+I TYNT++ G  +       ++E  +L  ++    L PN+
Sbjct: 825 HVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNA 884

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ IL+  + + G      ++  +M+ KG    + TY+ LI  Y KS  M  A ++  +
Sbjct: 885 ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLND 944

Query: 123 MCENNISPNIVSYSILIDG 141
           +      PN  +Y IL  G
Sbjct: 945 LLTKGRIPNSFTYDILTCG 963



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           T+I  Y + +R   A   F  +  + L P    +  L+  F   G +    +M+S ML  
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFC 123

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI--VSYSILIDGLCKRGLME 149
           G   +V + + L+    K  ++  A         NN   +I  V+Y+ +I G C++GL++
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALG----YLRNNDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +        +   L  D +T  IL++GYC+ G    A  +  +++  G+  D + L+TL 
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 210 D 210
           D
Sbjct: 240 D 240



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++ +RGL P+  TY+ ++ GY  +    + + L  ++      P   T+ +LI  +
Sbjct: 870 KLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 929

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            K G+M +A  + + +L KG   N  TY  L  G+ 
Sbjct: 930 AKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 965



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F  LI  +    R   A+  FS M   G    +  ++ L+  +  S  +     +Y +M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV--VTYAILIRGYCKAGR 182
              + P++ S ++L+  LCK G ++ AL      L N+ + D+  VTY  +I G+C+ G 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLAL----GYLRNNDVVDIDNVTYNTVIWGFCQKGL 177

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
             +   L   M++ G+  D +
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSI 198


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 124/208 (59%), Gaps = 5/208 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E H      L+ ++   G+ PD++T ++I+ G+C   +L EA  LF ++  + L PN 
Sbjct: 337 VEESH-----SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNH 391

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  +I++  K GR+ +A  + S+M+ +G   ++VT + ++DG FK    K A +V+E 
Sbjct: 392 VSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET 451

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + + N++PN V+YS L+DG CK G ME A          H+ P+V+T++ +I GY K G 
Sbjct: 452 ILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 511

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++A+ +   M++  +MP+ ++ + L D
Sbjct: 512 LSKAVDVLREMVQRNVMPNTIVYAILID 539



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L  Q+  RG+  DI+T  T++ G   + +  EA ++FE +  + L PN
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+D +CK G+M+ A ++  KM ++    NV+T+S +I+GY K   +  A DV  
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + N+ PN + Y+ILIDG  K G  + A           L    V + IL+    + G
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 580

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L   M   GI PD +  ++L D
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLID 609



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 110/190 (57%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           + L+P ++TY T+I  YC    ++E+  L++K+    + P+ +T + ++  FC+ G++ +
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A ++F +M E G   N V+Y+ +I+  FKS  +  AF++  +M    IS +IV+ + ++D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GL K G  +EA   F   L  +L P+ VTY+ L+ GYCK G+   A  +   M +  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 201 DGLLLSTLAD 210
           + +  S++ +
Sbjct: 495 NVITFSSIIN 504



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A+ +  ++  R + P+ I Y  +I GY      D A    +++   +L+ +++
Sbjct: 508 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 567

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F IL++   + GRMD+A  +   M  KG   ++V Y+ LIDGYFK  N  +A  + +EM
Sbjct: 568 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 627

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E NI  ++V+Y+ LI GL + G  +   Y     ++  L PD +TY  +I  YC  G+ 
Sbjct: 628 KEKNIRFDVVAYNALIKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKT 686

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A+ + + M   GIMP+ +  + L
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNIL 711



 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 101/178 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  A  LF ++ + GL+P+ ++Y TII       R+ EA  L  ++    +  + +
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T ++D   K G+  +A  +F  +L+     N VTYS L+DGY K   M+ A  V ++M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++ PN++++S +I+G  K+G++ +A+      +  +++P+ + YAILI GY KAG
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 46/237 (19%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + GL PD ITYNTII  YC   + ++A+ +  ++    + PN++T+ ILI   CK G
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719

Query: 77  ------------------------------------RMDDATMMFSKMLEKGPKANVVTY 100
                                                +    ++  +M+++G  A++VTY
Sbjct: 720 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTY 779

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL- 159
           + LI GY    +++ A   Y +M  + I+PNI +Y+ L+ GL   GLMEE +      + 
Sbjct: 780 NALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVS 839

Query: 160 ---DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
              +  L+P+  TY IL+ GY + G   + + L+  M+  G +P      TL  YN+
Sbjct: 840 EMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP------TLKTYNV 890



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            L D G+  D+I  NT+I GYC    + +A +L E      +K + +T+  L+ AFCK G
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG 281

Query: 77  RMDDATMMFSKMLE-------------------KGPKANVVTYSCLIDGYFKSQNMKSAF 117
            +  A  +F+++L                    K  +  +VTY+ LI  Y K   ++ + 
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +Y++M  N I P++V+ S ++ G C+ G + EA   F    +  L P+ V+YA +I   
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            K+GR  EA  L   M+  GI  D +  +T+ D   +   ++E
Sbjct: 402 FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 19/202 (9%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D +TYNT+I G+C    +D+   L  ++    L  +SIT  IL+  +C+ G +  A  + 
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             +++ G   +V+  + LIDGY ++  M  A ++ E    +++  +IV+Y+ L+   CK 
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280

Query: 146 GLMEEALYAFHCALD-------------------NHLLPDVVTYAILIRGYCKAGRPTEA 186
           G +  A   F+  L                     +L P +VTY  LI  YCK     E+
Sbjct: 281 GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEES 340

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             LY  M+ NGIMPD +  S++
Sbjct: 341 HSLYKKMIMNGIMPDVVTCSSI 362



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 37/238 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  L   +  +G++PDI+ Y ++I GY        A+ + +++    ++ + + + 
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYN 640

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    + G+ D    + S+M+E G   + +TY+ +I+ Y      + A D+  EM   
Sbjct: 641 ALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY 699

Query: 127 NISPNIVSYSILIDGLCKRGL-------------------------MEEALYAFHCALDN 161
            I PN V+Y+ILI GLCK G                          + E L A    L  
Sbjct: 700 GIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKR 759

Query: 162 H-----------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                       +  D+VTY  LIRGYC      +A++ Y  M  +GI P+    +TL
Sbjct: 760 QKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 817



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 4/165 (2%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  RG+  D++TYN +I GYC+ + +++A++ + ++    + PN  T+  L+      G
Sbjct: 766 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 825

Query: 77  ----RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
                M++   + S+M E+G   N  TY  L+ GY +  N K    ++ EM      P +
Sbjct: 826 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 885

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +Y++LI    K G M EA    +  L    +P+  TY IL  G+
Sbjct: 886 KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 930



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 4/139 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN----RLDEAVQLFEKLTCVQLKPNS 62
           H++ ALK + Q+   G+ P+I TYNT++ G  +       ++E  +L  ++    L PN+
Sbjct: 791 HVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNA 850

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ IL+  + + G      ++  +M+ KG    + TY+ LI  Y KS  M  A ++  +
Sbjct: 851 ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLND 910

Query: 123 MCENNISPNIVSYSILIDG 141
           +      PN  +Y IL  G
Sbjct: 911 LLTKGRIPNSFTYDILTCG 929



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           T+I  Y + +R   A   F  +  + L P    +  L+  F   G +    +M+S ML  
Sbjct: 64  TLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFC 123

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI--VSYSILIDGLCKRGLME 149
           G   +V + + L+    K  ++  A         NN   +I  V+Y+ +I G C++GL++
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALG----YLRNNDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +        +   L  D +T  IL++GYC+ G    A  +  +++  G+  D + L+TL 
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 210 D 210
           D
Sbjct: 240 D 240



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++ +RGL P+  TY+ ++ GY  +    + + L  ++      P   T+ +LI  +
Sbjct: 836 KLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 895

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            K G+M +A  + + +L KG   N  TY  L  G+ 
Sbjct: 896 AKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 931



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F  LI  +    R   A+  FS M   G    +  ++ L+  +  S  +     +Y +M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV--VTYAILIRGYCKAGR 182
              + P++ S ++L+  LCK G ++ AL      L N+ + D+  VTY  +I G+C+ G 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLAL----GYLRNNDVVDIDNVTYNTVIWGFCQKGL 177

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
             +   L   M++ G+  D +
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSI 198


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE +L  A  L+ ++  R + P++ TYN++I G+C    L +A  +F+ +      P+
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 848

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R++D   +F +M  +G   +  TY+ LI GY ++  +  A  V+ 
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 908

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  +SP+IV+Y+IL+D LC  G +E+AL        + +  D++TY I+I+G C+  
Sbjct: 909 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 968

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L+ S+ R G+ PD +   T+
Sbjct: 969 KLKEAWCLFRSLTRKGVKPDAIAYITM 995



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L   +   G  P+++ YNT+I G C    L+ A+++F  +    ++ +++T+  LI 
Sbjct: 693 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 752

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
                GR  DA  +   M+++    NV+ ++ LID + K  N+  A ++Y+EM   ++ P
Sbjct: 753 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 812

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+ LI+G C  G + +A Y F   +     PDVVTY  LI G+CK+ R  + M+L+
Sbjct: 813 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 872

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G++ D    +TL
Sbjct: 873 CEMTYQGLVGDAFTYNTL 890



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 114/202 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +K+ +LD A +L+ ++    ++P+ +TYN+II G C   RL +A + F+ +      P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+  LI  FCK   +D+   +F +M  +G  A++ TY+ LI GY +   ++ A D++
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    ++P+I+++ IL+ GLC  G +E AL  F    ++     +V Y I+I G CKA
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434

Query: 181 GRPTEAMQLYDSMLRNGIMPDG 202
            +  +A +L+  +   G+ PD 
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDA 456



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL+L  ++  +GL  D++TYNT++ G C   R  +A ++   +    + P+
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LID F K+G +D+A  ++ +M++     N VTY+ +I+G      +  A   ++
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN+V+Y+ LI G CK  +++E +  F          D+ TY  LI GYC+ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A+ ++  M+   + PD
Sbjct: 366 KLRVALDIFCWMVSRRVTPD 385



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 105/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L   +   G EP+++ YNT+I G C    L+ A++L  ++    L  + +T+  L+ 
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  DA  M   M+++    +VVT++ LID + K  N+  A ++Y+EM ++++ P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y+ +I+GLC  G + +A   F         P+VVTY  LI G+CK     E M+L+
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G   D    +TL
Sbjct: 340 QRMSCEGFNADIFTYNTL 357



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL++F  +  +G+  D +TYNT+I G  +  R  +A +L   +   ++ PN
Sbjct: 719 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 778

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I FT LID F KEG + +A  ++ +M+ +    NV TY+ LI+G+     +  A  +++
Sbjct: 779 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 838

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ LI G CK   +E+ +  F       L+ D  TY  LI GYC+AG
Sbjct: 839 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 898

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A ++++ M+  G+ PD +  + L D
Sbjct: 899 KLNVAQKVFNRMVDCGVSPDIVTYNILLD 927



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 112/193 (58%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            L  A  +F  +  +G  PD++TYNT+I G+C   R+++ ++LF ++T   L  ++ T+  
Sbjct: 830  LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            LI  +C+ G+++ A  +F++M++ G   ++VTY+ L+D    +  ++ A  + E++ ++ 
Sbjct: 890  LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 949

Query: 128  ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +  +I++Y+I+I GLC+   ++EA   F       + PD + Y  +I G C+ G   EA 
Sbjct: 950  MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 1009

Query: 188  QLYDSMLRNGIMP 200
            +L   M  +G MP
Sbjct: 1010 KLCRRMKEDGFMP 1022



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +     + A  LF ++      P I+ +  ++    +L R +  +   +K+    +  +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +FTILI  FC+  R+  A  +  KM++ G + ++VT+  L+ G+     +  AF +  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++   PN+V Y+ LIDGLCK G +  AL   +      L  DVVTY  L+ G C +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R ++A ++   M++  I PD +  + L D  ++     E
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 103/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  LF ++      P I+ +  ++     +N+ D  + L+ K+  + +  +  +FTI
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC+  R+  A  +  KM++ G + ++VT   L++G+ +    + A  + + M    
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ +I+GLCK   +  AL  F+C     +  D VTY  LI G   +GR T+A 
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M++  I P+ +  + L D
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALID 787



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+  D+ ++  +I  +C  +RL  A+ +  K+  +  +P+ +TF  L+  FC   R+ DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M++ G + NVV Y+ LIDG  K+  +  A ++  EM +  +  ++V+Y+ L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC  G   +A       +   + PDVVT+  LI  + K G   EA +LY  M+++ + P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 202 GLLLSTLAD 210
            +  +++ +
Sbjct: 281 NVTYNSIIN 289



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  +KLF ++T +GL  D  TYNT+I GYC   +L+ A ++F ++    + P+ +
Sbjct: 861  KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 920

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+ IL+D  C  G+++ A +M   + +     +++TY+ +I G  ++  +K A+ ++  +
Sbjct: 921  TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 980

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEA 151
                + P+ ++Y  +I GLC++GL  EA
Sbjct: 981  TRKGVKPDAIAYITMISGLCRKGLQREA 1008



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 80/144 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  +KLF +++  G   DI TYNT+I GYC + +L  A+ +F  +   ++ P+ IT  I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  G ++ A + F  M E      +V Y+ +I G  K+  ++ A++++  +    
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA 151
           + P+  +Y+I+I GLCK G   EA
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREA 475



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 104/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L+ ++ + G+  D+ ++  +I  +C  +RL  A+ L  K+  +  +P+ +T   
Sbjct: 620 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 679

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ FC+  R  +A  +   M   G   NVV Y+ +I+G  K++++ +A +V+  M +  
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  + V+Y+ LI GL   G   +A       +   + P+V+ +  LI  + K G   EA 
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            LY  M+R  ++P+    ++L +
Sbjct: 800 NLYKEMIRRSVVPNVFTYNSLIN 822



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+    R ++A  LF ++   Q  P+ + FT L+ A     R +       KM   G   
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  + +   +  A  V  +M +    P+IV++  L+ G C    + +A    
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + +   P+VV Y  LI G CK G    A++L + M + G+  D +  +TL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 1/176 (0%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           + D+A  LF ++   +  P+ + FT ++    K  + D    ++ KM   G   ++ +++
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            LI  + +   +  A  +  +M +    P+IV+   L++G C+    +EA+         
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             +P+VV Y  +I G CK      A++++  M + GI  D +  +TL    L +SG
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS-GLSNSG 758



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL +F  +  R + PDIIT+  ++ G C    ++ A+  F+ +   +     + + I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK  +++ A  +F ++  +G K +  TY+ +I G  K+   + A ++   M E  
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486

Query: 128 I 128
           I
Sbjct: 487 I 487



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 54/105 (51%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           AF ++ EM ++   P+IV ++ ++  + K    +  +Y +H   +  +  D+ ++ ILI 
Sbjct: 588 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +C+  R + A+ L   M++ G  P  + L +L +   Q +  QE
Sbjct: 648 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE 692


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 113/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A+KL  +L ++GL   ++ +N++I  Y      D+A + +  +      P+S T  
Sbjct: 437 RLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCN 496

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   C++G + +A ++  +MLEKG   N V Y+ L+DGYFK  N++ A  +++EM E 
Sbjct: 497 SLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKER 556

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+ V+++ LIDGL K G +EEA   F        +P+   Y  LIRG C  GR TEA
Sbjct: 557 GIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEA 616

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L   M + G++ D    + + D
Sbjct: 617 LKLEKEMRQKGLLSDTFTFNIIID 640



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K  +L+ A  L+ ++ +RG+ PD + +  +I G      ++EA ++F +++ +   PN+
Sbjct: 538 FKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  LI   C  GR+ +A  +  +M +KG  ++  T++ +IDG+ +   MK A + + +
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLD 657

Query: 123 MCENNISPNIVSYSILIDGLCKR----GLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           M    + P+I +++ILI G CK     G  E     + C LD    PD+ TY   + GYC
Sbjct: 658 MQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLD----PDITTYNTYMHGYC 713

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +  +A+ + D ++  GI+PD +  +T+
Sbjct: 714 RMRKMNQAVIILDQLISAGIVPDTVTYNTM 743



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 1/209 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L+ ++   G+ PD +T+N ++ G+    R++++ +L + L    L  +S  + +++ + C
Sbjct: 374 LYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLC 433

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             GR+D+A  +  ++LEKG   +VV ++ LI  Y ++     AF+ Y  M     +P+  
Sbjct: 434 WAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSS 493

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           + + L+ GLC++G ++EA    +  L+     + V Y +L+ GY K      A  L+  M
Sbjct: 494 TCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEM 553

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
              GI PD +  + L D  L  +G+ E  
Sbjct: 554 KERGIYPDAVAFTALID-GLSKAGNVEEA 581



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 94/175 (53%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            PD++T+N +I   C   R   A+     +    ++P+  TFT ++ A C+EG + +A  
Sbjct: 279 SPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARK 338

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F  + + G   N   Y+ L+DGYFK++ +  A  +YEEM    +SP+ V+++IL+ G  
Sbjct: 339 LFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHY 398

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           K G +E++       + + L  D   Y +++   C AGR  EAM+L   +L  G+
Sbjct: 399 KYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGL 453



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 105/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A  L  ++ ++G   + + Y  ++ GY  +N L+ A  L++++    + P+
Sbjct: 502 LCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPD 561

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ FT LID   K G +++A  +F +M   G   N   Y+ LI G      +  A  + +
Sbjct: 562 AVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEK 621

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  +  +  +++I+IDG C+RG M+ A+  F       LLPD+ T+ ILI GYCKA 
Sbjct: 622 EMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAF 681

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A ++ + M   G+ PD
Sbjct: 682 DMVGAGEIVNKMYSCGLDPD 701



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +++ A ++F +++  G  P+   YN++I G C   R+ EA++L +++    L  +
Sbjct: 572 LSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSD 631

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF I+ID FC+ G+M  A   F  M   G   ++ T++ LI GY K+ +M  A ++  
Sbjct: 632 TFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN 691

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P+I +Y+  + G C+   M +A+      +   ++PD VTY  ++ G C + 
Sbjct: 692 KMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SD 750

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               AM L   +L+ G +P+
Sbjct: 751 ILDRAMILTAKLLKMGFIPN 770



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 2/185 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALKL  ++  +GL  D  T+N II G+C   ++  A++ F  +  + L P+  TF ILI 
Sbjct: 616 ALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIG 675

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK   M  A  + +KM   G   ++ TY+  + GY + + M  A  + +++    I P
Sbjct: 676 GYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVP 735

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y+ ++ G+C   +++ A+      L    +P+V+T  +L+  +CK G P +A+ ++
Sbjct: 736 DTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL-IW 793

Query: 191 DSMLR 195
              LR
Sbjct: 794 GQKLR 798



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 96/191 (50%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A+     +   G+EP + T+ TI+   C    + EA +LF+ +  + + PN+  +  L+
Sbjct: 300 VAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLM 359

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D + K   +  A++++ +M   G   + VT++ L+ G++K   ++ +  + +++  + + 
Sbjct: 360 DGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLF 419

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            +   Y +++  LC  G ++EA+      L+  L   VV +  LI  Y +AG   +A + 
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479

Query: 190 YDSMLRNGIMP 200
           Y  M+R G  P
Sbjct: 480 YRIMVRCGFTP 490



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 94/187 (50%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           E D    NT++ G+ ++    EA+++   +  V ++P   + TIL+    + G       
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F  M+ KGP+ + +T++ +I G+ +   +     +   M +   SP++V+++ILI+  C
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
             G    A+   H  + + + P V T+  ++   C+ G   EA +L+D +   GI P+  
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 204 LLSTLAD 210
           + +TL D
Sbjct: 354 IYNTLMD 360



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 81/149 (54%), Gaps = 4/149 (2%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL+PDI TYNT + GYC + ++++AV + ++L    + P+++T+  ++   C +  +D A
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRA 755

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++ +K+L+ G   NV+T + L+  + K    + A    +++ E +   + +SY IL   
Sbjct: 756 MILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQA 815

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTY 170
            C   LM++ +       + HL  D + Y
Sbjct: 816 YC---LMQDDVELVRGTYEKHLFMDFLMY 841



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +  QL   G+ PD +TYNT++ G CS + LD A+ L  KL  +   PN IT  +
Sbjct: 718 MNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNM 776

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           L+  FCK+G  + A +   K+ E     + ++Y  L   Y
Sbjct: 777 LLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAY 816


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 115/200 (57%), Gaps = 1/200 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L  ++K+F ++ D+ ++P++I+YN++I G C+  ++ EA+ + +K+    ++PN I
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK   + +A  MF  +  +G       Y+ LID Y K   +   F + EEM
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++ +Y+ LI GLC+ G +E A   F   L +  LPD+VT+ IL+ GYC+ G  
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD-QLTSKGLPDLVTFHILMEGYCRKGES 486

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            +A  L   M + G+ P  L
Sbjct: 487 RKAAMLLKEMSKMGLKPRHL 506



 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 117/212 (55%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE        ++ ++  R ++P++ T+N +I   C   ++++A  + E +      PN
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257

Query: 62  SITFTILIDAFCK---EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +++  LID +CK    G+M  A  +  +M+E     N+ T++ LIDG++K  N+  +  
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V++EM + ++ PN++SY+ LI+GLC  G + EA+      +   + P+++TY  LI G+C
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K     EA+ ++ S+   G +P   + + L D
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 3/203 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN---RLDEAVQLFEKLTCVQL 58
           L K   ++ A  +   +   G  P++++YNT+I GYC L    ++ +A  + +++    +
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN  TF ILID F K+  +  +  +F +ML++  K NV++Y+ LI+G      +  A  
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + ++M    + PN+++Y+ LI+G CK  +++EAL  F        +P    Y +LI  YC
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           K G+  +   L + M R GI+PD
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPD 435



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 98/167 (58%), Gaps = 2/167 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D    L  ++   G+ PD+ TYN +I G C    ++ A +LF++LT   L P+ +TF I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHI 475

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
           L++ +C++G    A M+  +M + G K   +TY+ ++ GY K  N+K+A ++  +M  E 
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
            +  N+ SY++L+ G  ++G +E+A    +  L+  L+P+ +TY I+
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 2/195 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL +FG +  +G  P    YN +I  YC L ++D+   L E++    + P+  T+  
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+ G ++ A  +F ++  KG   ++VT+  L++GY +    + A  + +EM +  
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + P  ++Y+I++ G CK G ++ A         +  L  +V +Y +L++GY + G+  +A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 187 MQLYDSMLRNGIMPD 201
             L + ML  G++P+
Sbjct: 561 NMLLNEMLEKGLVPN 575



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 91/150 (60%), Gaps = 2/150 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  +++AA KLF QLT +GL PD++T++ ++ GYC      +A  L ++++ + LKP 
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+ I++  +CKEG +  AT M ++M  E+  + NV +Y+ L+ GY +   ++ A  + 
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            EM E  + PN ++Y I+ + +  +G + +
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 3/184 (1%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I  + ++  Y + +R +   + F++      K ++++   L+ A  KE R  D   ++ +
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK--- 144
           M+ +  + NV T++ +I+   K+  M  A DV E+M     SPN+VSY+ LIDG CK   
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G M +A       ++N + P++ T+ ILI G+ K      +M+++  ML   + P+ + 
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333

Query: 205 LSTL 208
            ++L
Sbjct: 334 YNSL 337



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NSI   +L+ A+    R +     F +    G K + ++   L+    K         VY
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILI 174
           +EM    I PN+ +++++I+ LCK G M +A      +  + C+      P+VV+Y  LI
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS------PNVVSYNTLI 265

Query: 175 RGYCK---AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            GYCK    G+  +A  +   M+ N + P+    + L D
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 3/198 (1%)

Query: 9   DAALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITF 65
           D A+ LF Q+      + PD +TYNT++ G+C   RL EA  LFE +      +PN +T+
Sbjct: 129 DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTY 188

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           ++LID +CK G + +   +  +M  +G KA+V  YS LI  +    ++++  ++++EM  
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             +SPN+V+YS L+ GL + G   EA           + PDVV Y +L  G CK GR  +
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGD 308

Query: 186 AMQLYDSMLRNGIMPDGL 203
           A+++ D M++ G  P  L
Sbjct: 309 AIKVLDLMVQKGEEPGTL 326



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 110/197 (55%), Gaps = 3/197 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC--VQLK 59
           L KE  +D A  +   +  +G +PD +TYNT++ G C   ++ EA+ L++ L      +K
Sbjct: 335 LCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK 394

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+  T   LI   CKEGR+ DA  + S M+E G + N+VTY+ LI+GY  ++ +  A  +
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKL 454

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++   E+  SPN ++YS++I+GLCK  ++  A   F    D+ + P V+ Y  L+   C+
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR 514

Query: 180 AGRPTEAMQLYDSMLRN 196
                +A  L+  M RN
Sbjct: 515 EDSLEQARSLFQEM-RN 530



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 123/223 (55%), Gaps = 3/223 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A ++   + + GL+ +I+TYN +I GY +  +L EA++L++        PN
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T++++I+  CK   +  A  +F KM + G +  V+ Y+ L+    +  +++ A  +++
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQ 526

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N + ++VS++I+IDG  K G ++ A           L+PD VT++ILI  + K G
Sbjct: 527 EMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLG 586

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLL-STLADYNLQSSGSQEHCI 223
              EAM LY+ M+  G +P  ++  S L  Y L+  G  E  I
Sbjct: 587 MLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLK--GETEKII 627



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 7/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT----CVQLKPNS 62
           H   A  +   +T RG   ++   N ++ G+C   + D+A+ LF ++     CV   P+ 
Sbjct: 92  HPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVV--PDC 149

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +T+  L++ FCK  R+ +A ++F  M + G  + N+VTYS LID Y KS  +     + E
Sbjct: 150 VTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLE 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  ++  YS LI   C  G +E     F   L   + P+VVTY+ L++G  + G
Sbjct: 210 EMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTG 269

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA ++   M   G+ PD +  + LAD
Sbjct: 270 RWREASEMLKDMTARGVRPDVVAYTVLAD 298



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 2/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +   L L  ++   GL+ D+  Y+++I  +C    ++   +LF+++   ++ PN +
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVV 256

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ L+    + GR  +A+ M   M  +G + +VV Y+ L DG  K+     A  V + M
Sbjct: 257 TYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM 316

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P  ++Y+++++GLCK   M++A       +     PD VTY  L++G C AG+ 
Sbjct: 317 VQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKI 376

Query: 184 TEAMQLYDSMLRNG--IMPD 201
            EAM L+  +L     + PD
Sbjct: 377 HEAMDLWKLLLSEKFHVKPD 396



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 107/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ALKL+    + G  P+ +TY+ +I G C +  L  A  LF K+    ++P  I +  L+ 
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C+E  ++ A  +F +M       +VV+++ +IDG  K+ ++KSA ++  EM   ++ P
Sbjct: 511 SLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVP 570

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V++SILI+   K G+++EA+  +   +    +P VV +  L++GY   G   + + L 
Sbjct: 571 DAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLL 630

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M    ++ D  L ST+
Sbjct: 631 HQMADKDVVLDSKLTSTI 648



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+K+   +  +G EP  +TYN ++ G C  +R+D+A  + E +     KP+++T+  L+ 
Sbjct: 309 AIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLK 368

Query: 71  AFCKEGRMDDATMMFSKMLEKG--PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
             C  G++ +A  ++  +L +    K +V T + LI G  K   +  A  ++  M E  +
Sbjct: 369 GLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGL 428

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             NIV+Y+ LI+G      + EAL  +  A+++   P+ +TY+++I G CK    + A  
Sbjct: 429 QGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARG 488

Query: 189 LYDSMLRNGIMPDGLLLSTLADYN 212
           L+  M  +GI P      T+ DYN
Sbjct: 489 LFCKMKDSGIRP------TVIDYN 506



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 83/175 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  LF ++ D G+ P +I YN ++   C  + L++A  LF+++  V    + ++F I
Sbjct: 483 LSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNI 542

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   K G +  A  + S+M       + VT+S LI+ + K   +  A  +YE+M    
Sbjct: 543 IIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCG 602

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             P +V +  L+ G   +G  E+ +   H   D  ++ D    + ++   C   R
Sbjct: 603 HVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 5/191 (2%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           P  +  N+    +   + L +AV LF +         P+    + LID   K  + D   
Sbjct: 3   PKRLLNNSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVV 62

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            ++ KM+         + S L + +  + +   AF V   M +     N+ + ++++ G 
Sbjct: 63  SVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGF 122

Query: 143 CKRGLMEEALYAFHCALDNH--LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG-IM 199
           C+ G  ++A+  F     N+  ++PD VTY  L+ G+CKA R  EA  L+++M + G   
Sbjct: 123 CRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCR 182

Query: 200 PDGLLLSTLAD 210
           P+ +  S L D
Sbjct: 183 PNLVTYSVLID 193


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK+   +  +GLE DI  Y T+I G+C +  ++ A + F KL  V L PN+I
Sbjct: 618 KSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTI 677

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + I+I A+     M+ A  +  +M+      ++  Y+ LIDG  K   +  A D+Y EM
Sbjct: 678 VYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEM 737

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+I  Y++LI+GLC  G +E A         N++ P V+ Y  LI G+ K G  
Sbjct: 738 LCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNL 797

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +L+D ML  G++PD
Sbjct: 798 QEAFRLHDEMLDKGLVPD 815



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 119/218 (54%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  +D+A  ++ ++    + P++ITY ++I G+C  N++D A+++ + +    L+ + 
Sbjct: 582 VKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDI 641

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  LI  FCK   M++A   FSK+LE G   N + Y+ +I  Y    NM++A ++++E
Sbjct: 642 TVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKE 701

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N I  ++  Y+ LIDGL K G +  AL  +   L   ++PD+  Y +LI G C  G+
Sbjct: 702 MINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQ 761

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A ++   M  N I P  LL +TL   + +    QE
Sbjct: 762 LENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQE 799



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 35/236 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ ++  +G+ P +++YN +I G+C    +D+A ++   +    LKPN+IT+TI
Sbjct: 447 VNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTI 506

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-------------------------PKANV----- 97
           L++   K+G  + A  MF +M+  G                          K N      
Sbjct: 507 LMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQS 566

Query: 98  -----VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                +TY+C+IDGY K   + SA  VY EMC + ISPN+++Y+ LI+G CK   M+ AL
Sbjct: 567 FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLAL 626

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                     L  D+  YA LI G+CK      A + +  +L  G+ P+ ++ + +
Sbjct: 627 KMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 114/205 (55%), Gaps = 1/205 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A  L     + G+   ++TYN ++   C L +++EA  L++K+    + P+ +
Sbjct: 409 KQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLV 467

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  +I   CK+G MDDA  + + ++E G K N +TY+ L++G FK  + + AF+++++M
Sbjct: 468 SYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQM 527

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P   +++ +I+GLCK G + EA    +  +    +P  +TY  +I GY K G  
Sbjct: 528 VAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAI 587

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A  +Y  M R+ I P+ +  ++L
Sbjct: 588 DSAESVYREMCRSEISPNVITYTSL 612



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 100/184 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P  +TYN II GY     +D A  ++ ++   ++ PN IT+T LI+ FCK  +MD A  M
Sbjct: 569 PTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKM 628

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M  KG + ++  Y+ LI G+ K Q+M++A   + ++ E  ++PN + Y+I+I     
Sbjct: 629 HDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRN 688

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              ME AL      ++N +  D+  Y  LI G  K G+ + A+ LY  ML  GI+PD  +
Sbjct: 689 LNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFM 748

Query: 205 LSTL 208
            + L
Sbjct: 749 YNVL 752



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 102/207 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   + A  +F Q+   G+ P   T+N+II G C + R+ EA             P S+
Sbjct: 513 KKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSM 572

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID + KEG +D A  ++ +M       NV+TY+ LI+G+ KS  M  A  ++++M
Sbjct: 573 TYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDM 632

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  +I  Y+ LI G CK   ME A   F   L+  L P+ + Y I+I  Y      
Sbjct: 633 KRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNM 692

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+ L+  M+ N I  D  + ++L D
Sbjct: 693 EAALNLHKEMINNKIPCDLKIYTSLID 719



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 113/193 (58%), Gaps = 1/193 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++AL+LF ++ + G+ P++  ++ +I     +  +++A +L+ ++ C+ L+P       
Sbjct: 343 VNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNF 402

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  F K+  +++A ++    +E G  A+VVTY+ ++    +   +  A +++++M    
Sbjct: 403 LLKGFRKQNLLENAYLLLDGAVENG-IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKG 461

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++VSY+ +I G CK+G M++A    +  +++ L P+ +TY IL+ G  K G    A 
Sbjct: 462 ITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAF 521

Query: 188 QLYDSMLRNGIMP 200
            ++D M+  GI+P
Sbjct: 522 NMFDQMVAAGIVP 534



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 76/135 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++AAL L  ++ +  +  D+  Y ++I G     +L  A+ L+ ++ C  + P+   + 
Sbjct: 691 NMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYN 750

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI+  C  G++++A  +  +M        V+ Y+ LI G+FK  N++ AF +++EM + 
Sbjct: 751 VLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDK 810

Query: 127 NISPNIVSYSILIDG 141
            + P+  +Y IL++G
Sbjct: 811 GLVPDDTTYDILVNG 825



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 99/207 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +I+   ++ A +LF ++ +R +  D  T   ++       +  EA + F +     LK +
Sbjct: 197 MIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLD 256

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +++I+I A C+   +D A+ +     E G   +  TY+ +I    +  N   A  + +
Sbjct: 257 AASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKD 316

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM ++ +  N+   + LI G C RG +  AL  F   ++  + P+V  +++LI    K G
Sbjct: 317 EMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIG 376

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A +LY  M   G+ P   +L+ L
Sbjct: 377 NVEKANELYTRMKCMGLQPTVFILNFL 403



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 100/209 (47%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   +  A++ F  + + G+ P +   N ++      N +++A +LF+++   ++  + 
Sbjct: 163 VRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDC 222

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  +L+ A  K G+  +A   F +   +G K +  +YS +I    +  ++  A  + E 
Sbjct: 223 YTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEG 282

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E    P+  +Y+ +I    + G   EAL      +D+ +  +V     LI+GYC  G 
Sbjct: 283 DEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGD 342

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              A++L+D ++  G+ P+  + S L ++
Sbjct: 343 VNSALRLFDEVVEVGVTPNVAIFSVLIEW 371



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 59/105 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  L  AL L+ ++  RG+ PDI  YN +I G C+  +L+ A ++ +++    + P 
Sbjct: 721 LLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPT 780

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
            + +  LI    KEG + +A  +  +ML+KG   +  TY  L++G
Sbjct: 781 VLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 61/140 (43%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S  F  L+ ++ +  ++ +A   F  MLE G    V   + L+    +   ++ A  ++
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM E  I  +  +  +L+    K G   EA   F  A    L  D  +Y+I+I+  C+ 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
                A +L +     G +P
Sbjct: 271 SDLDLASKLVEGDEELGWVP 290



 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/104 (20%), Positives = 48/104 (46%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            ++ L+  Y ++  +  A + +  M E+ + P +   ++L+  + +R ++E+A   F   
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            +  +  D  T  +L+R   K G+  EA + +      G+  D 
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDA 257


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A +L   +    + PD+I+YNT++ G+C   R+DEA +L + +  + LKP+
Sbjct: 457 LCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPD 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+  +CK  R+DDA  +F +ML KG    VVTY+ ++ G F+      A ++Y 
Sbjct: 517 EFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYL 576

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N    +I +Y+I+++GLC+   ++EA   F       L  D+ T  I+I    K G
Sbjct: 577 NMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGG 636

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  +AM L+ ++   G++PD      +A+ NL   GS E
Sbjct: 637 RKEDAMDLFATISAYGLVPDVETYRLIAE-NLIKEGSLE 674



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 109/208 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +F  + D+G+ P+  TY  +I GY S  +  E VQ+ ++++   L+P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +L+D  CK GR  +A  +F  ++ KG K +V  Y  L+ GY     +       +
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N +SP+   ++I+ +   K+ +++EA++ F       L P VV Y  LI   CK G
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           R  +A+  ++ M+  G+ PD  + S+L 
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLV 419



 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 3/191 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITFTILID 70
           L  ++ + G   ++I+YN ++ G C+  R +EA++L   +         PN +T+T +ID
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +D A  +F  M++KG + N  TY+CLI GY  +   K    + +EM  + + P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V Y++L+D LCK G   EA   F   +   + P V  Y IL+ GY   G  +E     
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 191 DSMLRNGIMPD 201
           D M+RNG+ PD
Sbjct: 331 DLMVRNGVSPD 341



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 109/208 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A KL   +   GL+PD  TYNT++ GYC   R+D+A  LF ++    L P  +T+ 
Sbjct: 497 RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYN 556

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++    + GR  +A  ++  M+    K ++ TY+ +++G  ++  +  AF +++ +C  
Sbjct: 557 TILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++  +I + +I+I  L K G  E+A+  F       L+PDV TY ++     K G   E 
Sbjct: 617 DLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEEL 676

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            +L+ +M  NG  P+  +L+ L  + L 
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLH 704



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 99/187 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD   +N +   Y     +DEA+ +F+K+    L P  + +  LIDA CK GR+DDA
Sbjct: 337 GVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDA 396

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            + F++M+ +G   ++  +S L+ G       + A  ++ E+ +  I  N   ++IL+  
Sbjct: 397 VLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCN 456

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC+ G + EA       L   + PDV++Y  L+ G+C  GR  EA +L D M+  G+ PD
Sbjct: 457 LCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPD 516

Query: 202 GLLLSTL 208
               +TL
Sbjct: 517 EFTYNTL 523



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 106/205 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  + L P ++ Y  +I   C L R+D+AV  F ++    + P+  
Sbjct: 354 KKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIF 413

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ L+   C   + + A  +F ++L++G + N   ++ L+    +   +  A  + + M
Sbjct: 414 VFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLM 473

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P+++SY+ L+DG C  G ++EA       +   L PD  TY  L+ GYCKA R 
Sbjct: 474 LRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRI 533

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L+  ML  G+ P  +  +T+
Sbjct: 534 DDAYSLFREMLMKGLTPGVVTYNTI 558



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 104/185 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A KLF ++ D+G+  +   +N ++C  C   R+ EA +L + +  V ++P+ I++  L
Sbjct: 429 EKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTL 488

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D  C  GR+D+A  +   M+  G K +  TY+ L+ GY K++ +  A+ ++ EM    +
Sbjct: 489 VDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P +V+Y+ ++ GL + G   EA   +   ++N    D+ TY I++ G C+     EA +
Sbjct: 549 TPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFK 608

Query: 189 LYDSM 193
           ++ S+
Sbjct: 609 MFQSL 613



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 107/188 (56%), Gaps = 1/188 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA LK F Q+ + G+ PDI  +++++ G C++++ ++A +LF ++    ++ N+  F IL
Sbjct: 395 DAVLK-FNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNIL 453

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C+EGR+ +A  +   ML    + +V++Y+ L+DG+  +  +  A  + + M    +
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGL 513

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+  +Y+ L+ G CK   +++A   F   L   L P VVTY  ++ G  + GR  EA +
Sbjct: 514 KPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573

Query: 189 LYDSMLRN 196
           LY +M+ N
Sbjct: 574 LYLNMINN 581



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 18/215 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-P 60
           +I+EC +  A             P   TY  +I  +C + RL      F  +        
Sbjct: 80  MIRECSVKVA-------------PSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLN 126

Query: 61  NSITFTILIDAFCKEGRMDDAT-MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           N++ F  L+   C   R+D+AT ++  +M E G   NV++Y+ L+ G    +  + A ++
Sbjct: 127 NTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALEL 186

Query: 120 YEEMCEN---NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
              M ++   + +PN+V+Y+ +IDGLCK  +++ A   F   +D  + P+  TY  LI G
Sbjct: 187 MHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           Y   G+  E +Q+   M  +G+ PD ++ + L DY
Sbjct: 247 YLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDY 281



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 87/178 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF ++  +GL P ++TYNTI+ G   + R  EA +L+  +   + K +  
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIY 588

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TI+++  C+   +D+A  MF  +  K  + ++ T + +I    K    + A D++  +
Sbjct: 589 TYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATI 648

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
               + P++ +Y ++ + L K G +EE    F    +N   P+      L+R     G
Sbjct: 649 SAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRG 706



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 4/183 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L+  + +   + DI TY  I+ G C  N +DEA ++F+ L    L+ +  T  I+I 
Sbjct: 571 AKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K GR +DA  +F+ +   G   +V TY  + +   K  +++   +++  M EN  +P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N    + L+  L  RG +  A        + +   +  T ++LI  Y +A    E  QL 
Sbjct: 691 NSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRA----EYQQLA 746

Query: 191 DSM 193
            S+
Sbjct: 747 KSL 749



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+F  L  + L+ DI T N +I       R ++A+ LF  ++   L P+  T+ +
Sbjct: 603 VDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRL 662

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + +   KEG +++   +FS M E G   N    + L+       ++  A     ++ E N
Sbjct: 663 IAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKN 722

Query: 128 ISPNIVSYSILI 139
            S    + S+LI
Sbjct: 723 FSLEASTTSMLI 734



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFK------SQNMKSAFDVYEEMCENNISPN 131
           +DDA  +F +ML     A+V T++ L+    +      S+ + S F+     C   ++P+
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHL-LPDVVTYAILIRGYCKAGRPTEAMQLY 190
             +Y+ILI   C+ G ++    AF   L     L + V +  L++G C A R  EA    
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEAT--- 148

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           D +LR   MP+      +  YN+   G
Sbjct: 149 DILLRR--MPEFGCTLNVISYNILLKG 173



 Score = 43.1 bits (100), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A+ LF  ++  GL PD+ TY  I         L+E  +LF  +      PN
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPN 691

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S     L+      G +  A +  SK+ EK       T S LI  Y +++  + A  + E
Sbjct: 692 SRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPE 751

Query: 122 E 122
           +
Sbjct: 752 K 752


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 119/201 (59%), Gaps = 6/201 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ D G++PD+ T++ +I   C   ++ EA +L E +      PN++T+T L+   C
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN------N 127
              R+ +AT +F KM + G   +VVTY  L+ G  ++ N+K+A +++++M  +      N
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+++SYSI+IDGLCK G  +EA   F       ++P+V++Y  LI G+C++G+  +A 
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L++ M+  G+  + +  S +
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVM 740



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 129/250 (51%), Gaps = 41/250 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D A +LF ++  +G+ PD+I+Y T+I G+C   + ++A  LF ++  V ++P+
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371

Query: 62  SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
             T ++LID  CK+G                                   R+  AT +F 
Sbjct: 372 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFL 431

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN------NISPNIVSYSILID 140
           KM + G   NVVT + L+ G  +S N+K A ++++ M  +      N  PN +SYSI+ID
Sbjct: 432 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 491

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLCK G  +EA   F       ++PDV++Y  LI G+C++G+  +A  L++ M+  G+ P
Sbjct: 492 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 551

Query: 201 DGLLLSTLAD 210
           D    S L D
Sbjct: 552 DVTTFSVLID 561



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 41/249 (16%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------- 53
           ML K+  +  A KL   +  RG  PD++T  T++ G C  +R+ +A QLF K+       
Sbjct: 381 MLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440

Query: 54  ---TCVQL-------------------------------KPNSITFTILIDAFCKEGRMD 79
              TC  L                               KPN+I+++I+ID  CK GR D
Sbjct: 441 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 500

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A  +F +M   G   +V++Y+ LI G+ +S   K A  ++ EM +  + P++ ++S+LI
Sbjct: 501 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 560

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           D LCK G + EA       +    +P+ VTY  L++G C   R +EA QL+  M + G +
Sbjct: 561 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 620

Query: 200 PDGLLLSTL 208
           PD +   TL
Sbjct: 621 PDVVTYGTL 629



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQLKP 60
            +  A +LF  +   G  PD I Y T++ G C    ++ A+QL +++        ++ KP
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             I+++I+ID  CK+ R D+A  +F +M  +G   +V++Y+ LI G+  S   + A  ++
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  I P++ + S+LID LCK+G + EA       +    +PDVVT   L++G C  
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
            R ++A QL+  M + G MP+ +  +TL     QS 
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 456



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 41/250 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D A +LF ++  +G+ PD+I+Y ++I G+C   + ++A  LF ++  V ++ +
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI----------------- 104
             T ++LID  CKEG++ +A  +   M+++G   ++VTYS LI                 
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250

Query: 105 ------------------DGYFKSQNMKSAFDVYEEMCEN------NISPNIVSYSILID 140
                              G  ++ N+ +A  +++EM  +         P ++SYSI+ID
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID 310

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLCK    +EA   F       ++PDV++Y  LI G+C +G+  +A  L++ ML  GI P
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 370

Query: 201 DGLLLSTLAD 210
           D    S L D
Sbjct: 371 DVTTSSVLID 380



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 118/215 (54%), Gaps = 6/215 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  +  A +L   +  RG   DI+TY+T+I G C  +R+ EA +LF  +  +  +P
Sbjct: 200 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRP 259

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP------KANVVTYSCLIDGYFKSQNMK 114
           ++I +  L+   C+ G ++ A  +  +ML          K  +++YS +IDG  K +   
Sbjct: 260 DAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 319

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A ++++EM    I P+++SY+ LI G C  G  E+A   F+  LD  + PDV T ++LI
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              CK G+  EA +L + +++ G +PD +  +TL 
Sbjct: 380 DMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 6/208 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQLKP 60
            +  A +LF  +   G  PD I Y T++ G C   +++ A+ L +++        ++ KP
Sbjct: 60  RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             ++++I+ID  CK+ R D+A  +F +M  +G   +V++Y+ LI G+ +S   + A  ++
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  I  ++ + S+LID LCK G + EA       +    + D+VTY+ LI+G C  
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R +EA +L+ SM + G  PD +   TL
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTL 267



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 108/193 (55%), Gaps = 6/193 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML KE  +  A +L   +  RG  P+ +TY T++ G C  +R+ EA QLF K+  +   P
Sbjct: 562 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 621

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP------KANVVTYSCLIDGYFKSQNMK 114
           + +T+  L+   C+ G +  A  +  KML          K +V++YS +IDG  K     
Sbjct: 622 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 681

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A ++++EM    + PN++SY+ LI G C+ G +E+A + F+  +D  +  + VTY+++I
Sbjct: 682 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741

Query: 175 RGYCKAGRPTEAM 187
            G+CK G+  +A+
Sbjct: 742 HGFCKEGQIDKAL 754



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 6/195 (3%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G++PD+ T   +I  +C   ++ EA +L E +       + +T++ LI   C + R+ +A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN------NISPNIVSY 135
           T +F  M + G + + + Y  L+ G  ++  +  A  +++EM  +         P +VSY
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           SI+IDGLCK    +EA   F       ++PDV++Y  LI G+C++G+  +A  L++ ML 
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 196 NGIMPDGLLLSTLAD 210
            GI  D    S L D
Sbjct: 185 VGIRSDVTTSSMLID 199



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 89/153 (58%), Gaps = 6/153 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------VQLKP 60
            +  A +LF ++   G  PD++TY T++ G C    +  A++L +K+           KP
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I+++I+ID  CK GR D+A  +F +M   G   NV++Y+ LI G+ +S  ++ A  ++
Sbjct: 663 DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLF 722

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
            EM +  +  N V+YS++I G CK G +++AL+
Sbjct: 723 NEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALF 755



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 7/171 (4%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           V ++P+  T  +LID FCKEG++ +A  +   M+++G   ++VTYS LI G      +  
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN------HLLPDVVT 169
           A  ++  M +    P+ ++Y  L+ GLC+ G +  AL+     L++         P +V+
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           Y+I+I G CK  R  EA +L+  M   G+MPD +  ++L  +    SG  E
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI-HGFCRSGKWE 173



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ML  G + +V T   LID + K   +  A ++ E M +     +IV+YS LI GLC +  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           + EA   F         PD + Y  L++G C+ G+   A+ L+  ML +
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLND 109



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%)

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++ +  +LID  CK G + EA       +    + D+VTY+ LI+G C   R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +EA QL+ SM + G  PD +   TL
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTL 86


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 129/241 (53%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R ++A                 
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV 366

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G + N ++Y+ ++ G   ++    A D+  +M E   SPN V+++ +I+ LCK+GL+
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  G+ P+ ++ S++
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546

Query: 209 A 209
           A
Sbjct: 547 A 547



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 116/207 (56%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           ++L  Q+ + G  PD+ITY T+I G+C    +DEAV L + +     +PN+I++TI++  
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
            C   R  DA  + S+M+E+G   N VT++ +I+   K   ++ A ++ ++M  N  SP+
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPD 504

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           ++SYS +IDGL K G  +EAL   +  ++  + P+ + Y+ +     K GR    +Q++D
Sbjct: 505 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFD 564

Query: 192 SMLRNGIMPDGLLLSTLADYNLQSSGS 218
           ++    I  D +L + +     +  G+
Sbjct: 565 NIQDVTIRSDAVLYNAVISSLCKRGGT 591



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 106/199 (53%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  Q+ D G  PDI  Y T++ G C    L+ A ++ +++    LKPN + +  ++   
Sbjct: 281 QVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGL 340

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C   R + A  + ++M +     + VT++ L+D + ++  +    ++ E+M E+   P++
Sbjct: 341 CSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           ++Y+ +I+G CK GL++EA+            P+ ++Y I+++G C A R  +A  L   
Sbjct: 401 ITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQ 460

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M+  G  P+ +  +T+ ++
Sbjct: 461 MIEQGCSPNPVTFNTVINF 479



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D AL+L   L T  G +PD+++YN ++ G C   R      L E++  V   PN +TF 
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFN 264

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C+ G  +    + ++M++ G   ++  Y+ ++DG  K  +++ A ++ + M   
Sbjct: 265 TLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSY 324

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V Y+ ++ GLC     E+A        DN    D VT+ IL+  +C+ G     
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRV 384

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           ++L + ML +G +PD +  +T+
Sbjct: 385 IELLEQMLEHGCVPDVITYTTV 406



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 95/189 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  Q+ ++G  P+ +T+NT+I   C    +++A++L +++      P+ I+++ +ID
Sbjct: 454 AEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVID 513

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G+ D+A  + + M+ KG   N + YS +     K   +     +++ + +  I  
Sbjct: 514 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRS 573

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V Y+ +I  LCKRG  + A+      + +  +P+  TY ILIRG    G   EA ++ 
Sbjct: 574 DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633

Query: 191 DSMLRNGIM 199
             +   G +
Sbjct: 634 TELCSKGAL 642



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + DEA++L   +    + PN
Sbjct: 480 LCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  KEGR++    MF  + +   +++ V Y+ +I    K      A +   
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLA 599

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  +   PN  +Y+ILI GL   G ++EA
Sbjct: 600 YMVSSGCMPNESTYTILIRGLASEGFVKEA 629



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 2/209 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLN-RLDEAVQLFEKL-TCVQLKPNSITFTI 67
           +A+++   L  RG   D+   N ++   C     +DEA++L   L T     P+ +++  
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C   R      +  +M+  G   NVVT++ LI    ++   +    V  +M ++ 
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+I  Y+ ++DG+CK G +E A           L P+VV Y  +++G C A R  +A 
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +L   M  N    D +  + L D+  Q+ 
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNG 379



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 20/193 (10%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YN ++ GYC   +L  A +L      V + PN+ T+  ++ A C  GR+ DA  +  +M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAAS---VPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 90  EKGPKANVVTYSCLIDG---YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            +G       Y  +++           +SA  V +++     + ++ + +++++ +C +G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 147 --------LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                   L+ +   +F C       PDVV+Y  +++G C A R      L + M+R G 
Sbjct: 203 GSVDEALRLLRDLPTSFGCD------PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGC 256

Query: 199 MPDGLLLSTLADY 211
            P+ +  +TL  Y
Sbjct: 257 PPNVVTFNTLIGY 269



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 62/123 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL+L   + ++G+ P+ I Y++I        R++  +Q+F+ +  V ++ +
Sbjct: 515 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSD 574

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  +I + CK G  D A    + M+  G   N  TY+ LI G      +K A ++  
Sbjct: 575 AVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLT 634

Query: 122 EMC 124
           E+C
Sbjct: 635 ELC 637



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++  +++F  + D  +  D + YN +I   C     D A++    +      PN
Sbjct: 550 LSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPN 609

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI     EG + +A  M +++  KG
Sbjct: 610 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 640


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 116/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L KE   +A  +   +L D  G  PDI+TY+T+I  Y  +  L  A+++  ++    +K 
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+IT   ++DA CKE ++D+A  + +   ++G   + VTY  LI G+F+ + ++ A +++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I+P + +++ LI GLC  G  E A+  F    ++ LLPD  T+  +I GYCK 
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR  +A + Y+  +++   PD
Sbjct: 570 GRVEKAFEFYNESIKHSFKPD 590



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 109/192 (56%), Gaps = 1/192 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFT 66
           + +A ++F  +   G+  ++ T+N ++ GYC   +L++A+ + E++    ++ P+++T+ 
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++ A  K+GR+ D   +   M + G   N VTY+ L+ GY K  ++K AF + E M + 
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P++ +Y+ILI+GLC  G M E L          L PDVVTY  LI G  + G   EA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 187 MQLYDSMLRNGI 198
            +L + M  +G+
Sbjct: 365 RKLMEQMENDGV 376



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A  L      RG   D +TY T+I G+    ++++A+++++++  V++ P 
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  LI   C  G+ + A   F ++ E G   +  T++ +I GY K   ++ AF+ Y 
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E  +++  P+  + +IL++GLCK G+ E+AL  F+  ++   + D VTY  +I  +CK  
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDK 639

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA  L   M   G+ PD
Sbjct: 640 KLKEAYDLLSEMEEKGLEPD 659



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 4/205 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICG---YCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            AL++F ++    L+P+++T NT++ G   Y S   +  A ++F+ +  + +  N  TF 
Sbjct: 149 VALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFN 208

Query: 67  ILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +L++ +C EG+++DA  M  +M+ E     + VTY+ ++    K   +    ++  +M +
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N + PN V+Y+ L+ G CK G ++EA          ++LPD+ TY ILI G C AG   E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++L D+M    + PD +  +TL D
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLID 353



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L    +L   +   GL P+ +TYN ++ GYC L  L EA Q+ E +    + P+  
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+  C  G M +   +   M     + +VVTY+ LIDG F+      A  + E+M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
             + +  N V+++I +  LCK    E         +D H   PD+VTY  LI+ Y K G 
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + A+++   M + GI  + + L+T+ D
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILD 459



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 85/154 (55%), Gaps = 4/154 (2%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG---YFKSQNMKSA 116
           P+   F I + A+  EG+   A  +F KM+    K N++T + L+ G   Y  S ++ SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIR 175
            +V+++M +  +S N+ ++++L++G C  G +E+AL      +    + PD VTY  +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              K GR ++  +L   M +NG++P+ +  + L 
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + AL  F  L +   E D +TYNT+I  +C   +L EA  L  ++    L+P+
Sbjct: 601 LCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I    ++G++ +   +  K                  G F S  MK    V  
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKK----------------FSGKFGS--MKRDLQVET 701

Query: 122 EM------CENNISPNIVSYSILIDGLCKRGLMEE 150
           E        +  ++   ++YS +ID LC RG ++E
Sbjct: 702 EKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R  EA                 
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N V+Y+ ++ G   +     A ++  +M +    PN V+++ LI+ LCK+GL+
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ ++ S++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 209 A 209
           A
Sbjct: 538 A 538



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+   G  PD+ITY T+I G+C    +DEAV L + ++    KPN++++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C  GR  DA  + S+M+++G   N VT++ LI+   K   ++ A ++ ++M  N 
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  EEAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q++D++    I  D +L + +
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAV 572



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 109/199 (54%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  Q+++ G  PDI  Y TII G C    L+ A ++  ++    LKPN + +  ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C   R  +A  + S+M +K    + VT++ L+D + ++  +    ++ E+M  +   P++
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           ++Y+ +I+G CK GL++EA+            P+ V+Y I+++G C AGR  +A +L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M++ G  P+ +  +TL ++
Sbjct: 452 MIQQGCPPNPVTFNTLINF 470



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 4/220 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A+ L   ++  G +P+ ++Y  ++ G CS  R  +A +L  ++      PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+  CK+G ++ A  +  +ML  G   ++++YS +IDG  K+   + A ++   M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISPN + YS +   L + G + + +  F    D  +  D V Y  +I   CK    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 219
             A+  +  M+ NG MP+     +L+  LA   L     +
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  +L   G E DI++YN ++ G C   R  +  +L +++  V   PN +TF  
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 68  L-----------------------------------IDAFCKEGRMDDATMMFSKMLEKG 92
           L                                   ID  CKEG ++ A  + ++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            K NVV Y+ ++ G   ++  K A ++  EM + +   + V+++IL+D  C+ GL++  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 L +  +PDV+TY  +I G+CK G   EA+ L  SM   G  P+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 5/168 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K      A D + 
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA--LYAFHC---ALDNHLL 164
            M  N   PN  +Y++LI GL   GL +EA  L +  C   AL  HL+
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLM 638



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  +++ +G  P    Y+ I+   C       +V++ E +       ++    ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G +D+A  +  K+   G +A++V+Y+ ++ G   ++      ++ +EM   + +P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E          ++   PD+  YA +I G CK G    A ++ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +T+
Sbjct: 310 NRMPSYGLKPNVVCYNTV 327



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN ++ GYC   R  +          V + PN+ TF  ++   C  GR+ DA  +  
Sbjct: 79  VVAYNAMVAGYC---RAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  KG       Y  +++   +S   +++  V E M     + +  + +++++ +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 147 LMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            ++EA      L  F C        D+V+Y  +++G C A R  +  +L D M+R    P
Sbjct: 196 CVDEAVGLLRKLAFFGCE------ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 201 DGLLLSTLADY 211
           + +  +TL  Y
Sbjct: 250 NIVTFNTLIGY 260


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R  EA                 
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N V+Y+ ++ G   +     A ++  +M +    PN V+++ LI+ LCK+GL+
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ ++ S++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 209 A 209
           A
Sbjct: 538 A 538



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+   G  PD+ITY T+I G+C    +DEAV L + ++    KPN++++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C  GR  DA  + S+M+++G   N VT++ LI+   K   ++ A ++ ++M  N 
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  EEAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           Q++D++    I  D +L + +
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAV 572



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 109/199 (54%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  Q+++ G  PDI  Y TII G C    L+ A ++  ++    LKPN + +  ++   
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C   R  +A  + S+M +K    + VT++ L+D + ++  +    ++ E+M  +   P++
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           ++Y+ +I+G CK GL++EA+            P+ V+Y I+++G C AGR  +A +L   
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQ 451

Query: 193 MLRNGIMPDGLLLSTLADY 211
           M++ G  P+ +  +TL ++
Sbjct: 452 MIQQGCPPNPVTFNTLINF 470



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 4/220 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A+ L   ++  G +P+ ++Y  ++ G CS  R  +A +L  ++      PN +
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+  CK+G ++ A  +  +ML  G   ++++YS +IDG  K+   + A ++   M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ISPN + YS +   L + G + + +  F    D  +  D V Y  +I   CK    
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 219
             A+  +  M+ NG MP+     +L+  LA   L     +
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 35/229 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  +L   G E DI++YN ++ G C   R  +  +L +++  V   PN +TF  
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 68  L-----------------------------------IDAFCKEGRMDDATMMFSKMLEKG 92
           L                                   ID  CKEG ++ A  + ++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            K NVV Y+ ++ G   ++  K A ++  EM + +   + V+++IL+D  C+ GL++  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 L +  +PDV+TY  +I G+CK G   EA+ L  SM   G  P+
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 5/168 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN
Sbjct: 471 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K      A D + 
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA--LYAFHC---ALDNHLL 164
            M  N   PN  +Y++LI GL   GL +EA  L +  C   AL  HL+
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLM 638



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  +++ +G  P    Y+ I+   C       +V++ E +       ++    ++++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G +D+A  +  K+   G +A++V+Y+ ++ G   ++      ++ +EM   + +P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E          ++   PD+  YA +I G CK G    A ++ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +T+
Sbjct: 310 NRMPSYGLKPNVVCYNTV 327



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN ++ GYC   R  +          V + PN+ TF  ++   C  GR+ DA  +  
Sbjct: 79  VVAYNAMVAGYC---RAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  KG       Y  +++   +S   +++  V E M     + +  + +++++ +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 147 LMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            ++EA      L  F C        D+V+Y  +++G C A R  +  +L D M+R    P
Sbjct: 196 CVDEAVGLLRKLAFFGCE------ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 201 DGLLLSTLADY 211
           + +  +TL  Y
Sbjct: 250 NIVTFNTLIGY 260


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 119/209 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+K+F  +  +G  P++ +YN +I GYC + R+D+A+ L E+++   L  +++T+  
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+  A  +F +M+  G   ++VTY  L+D   K+ ++  A  + + +  +N
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I+ Y+I IDG+C+ G +E A   F       L PDV TY I+I G CK G   EA 
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           +L+  M  NG   DG + +T+    L+S+
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSN 619



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 106/197 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF +    G +PD++TY T++ G C +     A++L   +     +PN I 
Sbjct: 233 EGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA 292

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +ID+ CK+ ++ +A  +FS+M+ KG   ++ TY+ LI         K    +  EM 
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 352

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I PN+V +S ++D LCK G++  A       +   + PDVVTY  L+ G+C      
Sbjct: 353 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 412

Query: 185 EAMQLYDSMLRNGIMPD 201
           EA++++D+M+  G +P+
Sbjct: 413 EAVKVFDTMVHKGCVPN 429



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ PD+ T N +I  +C L RL  A  +  KL  +  +P++ TF 
Sbjct: 165 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFN 224

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F K + +G + +VVTY  L++G  K  N  +A  +   M + 
Sbjct: 225 TLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 284

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+++Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C        
Sbjct: 285 NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 344

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M+ + IMP+ ++ ST+ D
Sbjct: 345 TTLLNEMVNSKIMPNVVVFSTVVD 368



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +   +  RG+EPD++TY  ++ G+C  + +DEAV++F+ +      PN
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ILI+ +C+  RMD A  +  +M  +G  A+ VTY+ LI G      ++ A  ++ 
Sbjct: 430 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 489

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +   P++V+Y IL+D LCK   + EA+        ++L  D++ Y I I G C+AG
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 549

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A  L+ ++   G+ PD
Sbjct: 550 ELEAARDLFSNLSSKGLQPD 569



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 114/213 (53%), Gaps = 4/213 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ L  Q++ +GL  D +TYNT+I G C + RL  A+ LF ++      P+ +T+ I
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK   + +A ++   +      A+++ Y+  IDG  ++  +++A D++  +    
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+I+I GLCKRGL++EA   F    +N    D   Y  +IRG+ ++     A 
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGAT 625

Query: 188 QLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
           QL   ML  G   D     L++  L+D  L  S
Sbjct: 626 QLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQS 658



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +  AA++L   +  +   P++I YNTII   C   ++ EA  LF ++    + P+
Sbjct: 265 LCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI A C        T + ++M+      NVV +S ++D   K   +  A DV +
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P++V+Y+ L+DG C R  M+EA+  F   +    +P+V +Y ILI GYC+  
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  +AM L + M   G++ D +  +TL  + L   G  +H I
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLI-HGLCHVGRLQHAI 485



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 35/227 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ PDI TYN++I   C+L        L  ++   ++ PN
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359

Query: 62  SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
            + F+ ++DA CKEG                                    MD+A  +F 
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M+ KG   NV +Y+ LI+GY + Q M  A  + E+M    +  + V+Y+ LI GLC  G
Sbjct: 420 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 479

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ A+  FH  + +  +PD+VTY IL+   CK     EAM L  ++
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 526



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 87/171 (50%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            N LD+A+  F ++  +   P+++ FT L+ +  K         + ++M   G   +V T
Sbjct: 128 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 187

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
            + LI+ +   + +  AF V  ++ +    P+  +++ LI GLC  G + EAL+ F   +
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                PDVVTY  L+ G CK G  + A++L  SM++    P+ +  +T+ D
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 298



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL  A+ L   +    L+ DI+ YN  I G C    L+ A  LF  L+   L+P+
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I   CK G +D+A  +F KM E G   +   Y+ +I G+ +S     A  + +
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQ 629

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + +++++ L   GL
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDGL 655


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+ L L  ++T  G  PDI TYNT+I G C   R+ E  +LF ++      P+ IT++ 
Sbjct: 26  VDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSC 85

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FCK  R++ A  +F  ML++    +VVT+  L++GY  +  +  A  + EE+  ++
Sbjct: 86  LIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASD 145

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++ +Y+ L+DG CK   M EA             P+VV Y  LI  +C AG+PT A 
Sbjct: 146 CSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAY 205

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + M+ NG+ P+ +   +L
Sbjct: 206 KLLEEMVGNGVQPNAITYRSL 226



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 109/193 (56%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +T  G+EP+++TYN++I G+C  N +D  + L E++T     P+  T+  LID  CK GR
Sbjct: 1   MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGR 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           + +   +F +M  K    +V+TYSCLI G+ K   +  A  ++++M +    P++V++  
Sbjct: 61  VPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPT 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L++G C  GL+++A       + +   PDV TY  L+ G+CK  R  EA ++   M +  
Sbjct: 121 LVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGE 180

Query: 198 IMPDGLLLSTLAD 210
             P+ ++ + L D
Sbjct: 181 CQPNVVIYTALID 193



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 100/184 (54%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +LFG++  +   PD+ITY+ +I G+C L+R++ A  LF+ +      P+ +TF  L++ +
Sbjct: 66  RLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGY 125

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C  G +DDA  +  +++      +V TY+ L+DG+ K + M  A  V + M +    PN+
Sbjct: 126 CNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNV 185

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V Y+ LID  C  G    A       + N + P+ +TY  LI G+C  G   EA ++ + 
Sbjct: 186 VIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLER 245

Query: 193 MLRN 196
           + RN
Sbjct: 246 LERN 249



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 4/199 (2%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C LD    A  LF  +  +   PD++T+ T++ GYC+   +D+A +L E++      P+ 
Sbjct: 91  CKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDV 150

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+T L+D FCK  RM +A  +  +M +   + NVV Y+ LID +  +     A+ + EE
Sbjct: 151 YTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEE 210

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAG 181
           M  N + PN ++Y  LI G C  G +EEA         + +   D+  Y +++ G C+ G
Sbjct: 211 MVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTG 270

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R + A++L +++ ++G  P
Sbjct: 271 RMSAALELLEAIKQSGTPP 289



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 103/192 (53%), Gaps = 6/192 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +L  ++      PD+ TY +++ G+C + R+ EA ++ +++   + +PN + +T 
Sbjct: 131 VDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTA 190

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN- 126
           LIDAFC  G+   A  +  +M+  G + N +TY  LI G+  + +++ A  + E +  N 
Sbjct: 191 LIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNE 250

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG---YCKAGRP 183
           N   ++ +Y +++DGLC+ G M  AL        +   P    Y  LIRG     + GRP
Sbjct: 251 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGEMTLSRKGRP 310

Query: 184 TEAMQLYDSMLR 195
               ++Y+++++
Sbjct: 311 NA--KVYEAVIQ 320


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 112/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++PD++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G   ++V +S +I+   K   +  A ++++      
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P  V YS+L+DG C  G ME+AL  F   +   + P+ V Y  L+ GYCK GR  E +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  ML+ GI P  +L + + D
Sbjct: 590 SLFREMLQKGIKPSTILYNIIID 612



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  +II  N ++ G+C   R DEA+ +      +L CV   P+  +++
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCV---PDVFSYS 186

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     +VV YS +IDG+FK  ++  A D+++EM 
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMV 246

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P+ V+YS ++  LCK   M++A       ++  +LP+  TY  LI GY   G+  
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R+ I+PD + LS L
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSML 330



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 117/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++G+ P+  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T ++L+ + CK G++ +A  +F  M  KG   NV +Y+ +++GY     +    D+++
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P+I ++++LI      G++++A+  F+   D+ + PDVVTY  +I   C+ G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G+ PD
Sbjct: 444 KMDDAMEKFNQMIDQGVAPD 463



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 120/207 (57%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ PDI T+N +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 372 KGCLVDMT-DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I A C+ G+MDDA   F++M+++G   +   Y CLI G+    ++  A ++  E+
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +S +I+ LCK G + +A   F   ++  L P  V Y++L+ GYC  G+ 
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ ++  TL +
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVN 577



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+ + Y T++ GYC + R+DE + LF ++    +KP++I + I
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 609

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A + F +M E G   N  TY+ ++ G FK++    A  +++E+   N
Sbjct: 610 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++ + +I G+ +   +EEA   F     + L+P VVTY+I+I    K G   EA 
Sbjct: 670 VKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  PD  LL+
Sbjct: 730 DMFSSMQNAGCEPDSRLLN 748



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 99/177 (55%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++ Y+T+I G+     +++A  LF+++    + P+ +T++ ++ A CK   MD A   
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ KG   N  TY+ LI GY  +   K A  V++EM  ++I P++V+ S+L+  LCK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G ++EA   F         P+V +Y I++ GY   G   +   L+D ML +GI PD
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 110/210 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ +++II   C L R+ +A  +F+    V L P ++ +++L+D
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + N V Y  L++GY K   +     ++ EM +  I P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+I+IDGL + G    A   FH   ++ +  +  TY I++RG  K     EA+ L+
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLF 662

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  + + L+T+     Q+   +E
Sbjct: 663 KELRAMNVKINIITLNTMIAGMFQTRRVEE 692



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +F  +  +G  P++ +Y  ++ GY +   L +   LF+ +    + P+
Sbjct: 334 LCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF +LI A+   G +D A ++F++M + G K +VVTY  +I    +   M  A + + 
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++P+  +Y  LI G C  G + +A       ++N +  D+V ++ +I   CK G
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A  ++D  +  G+ P  ++ S L D
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 3/154 (1%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + N++  + L+ G+ +++    A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SYSIL+  LC +G   +A        +   +  PDVV Y+ +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+ K G   +A  L+  M++ GI PD +  S++
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 72/149 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ +IIT NT+I G     R++EA  LF  ++   L P 
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I    KEG +++A  MFS M   G + +    + ++    K   +  A     
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 768

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE 150
           ++ E N S   ++  +L+D    +G   E
Sbjct: 769 KIDERNFSLEHLTTMLLVDLFSSKGTCRE 797


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 119/201 (59%), Gaps = 6/201 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ D G++PD+ T++ +I   C   ++ EA +L E +      PN++T+T L+   C
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN------N 127
              R+ +AT +F KM + G   +VVTY  L+ G  ++ N+K+A +++++M  +      N
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+++SYSI+IDGLCK G  +EA   F       ++P+V++Y  LI G+C++G+  +A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L++ M+  G+  + +  S +
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVM 896



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 129/250 (51%), Gaps = 41/250 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D A +LF ++  +G+ PD+I+Y T+I G+C   + ++A  LF ++  V ++P+
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 62  SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
             T ++LID  CK+G                                   R+  AT +F 
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN------NISPNIVSYSILID 140
           KM + G   NVVT + L+ G  +S N+K A ++++ M  +      N  PN +SYSI+ID
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLCK G  +EA   F       ++PDV++Y  LI G+C++G+  +A  L++ M+  G+ P
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707

Query: 201 DGLLLSTLAD 210
           D    S L D
Sbjct: 708 DVTTFSVLID 717



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 6/208 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------VQLKP 60
            +  A +LF ++   G  P+++T  T++ G C    +  A++L + +        +  KP
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I+++I+ID  CK GR D+A  +F +M   G   +V++Y+ LI G+ +S   K A  ++
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  + P++ ++S+LID LCK G + EA       +    +P+ VTY  L++G C  
Sbjct: 698 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 757

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R +EA QL+  M + G +PD +   TL
Sbjct: 758 DRISEATQLFMKMQKLGCLPDVVTYGTL 785



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 6/210 (2%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQL 58
           E  +  A  LF  +   G  PD ITY T++ G C    ++ A+QL +++        ++ 
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 161

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           KP  I+++I+ID  CK+ R D+A  +F +M  +G   +V++Y+ LI G+  S   + A  
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++ EM +  I P++ +  +LID  CK G + EA       +    + D+VTY+ LI+G C
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              R +EA QL+ SM + G  PD +   TL
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTL 311



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQL 58
           E  +  A  LF  +   G  PD ITY T++ G C    ++ A+QL +++        ++ 
Sbjct: 395 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 454

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           KP  I+++I+ID  CK+ R D+A  +F +M  +G   +V++Y+ LI G+  S   + A  
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++ EM +  I P++ + S+LID LCK+G + EA       +    + DVVT   L++G C
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
              R ++A QL+  M + G MP+ +  +TL     QS 
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 119/214 (55%), Gaps = 7/214 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D A +LF ++  +G+ PD+I+Y ++I G+C   + ++A  LF ++  V ++P+
Sbjct: 175 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPD 234

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T  +LID FCKEG++ +A  +   M+ +G   ++VTYS LI G      +  A  ++ 
Sbjct: 235 VTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFM 294

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-------LLPDVVTYAILI 174
            M +    P+ ++Y  L+ GLC+ G +  AL+     L++        + PDV T ++LI
Sbjct: 295 SMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLI 354

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              CK G+  EA +L + M++ G + D +  STL
Sbjct: 355 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 6/214 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  +  A +L   +  RG   DI+TY+T+I G C  +R+ EA  LF  +  +  +P
Sbjct: 63  ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRP 122

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP------KANVVTYSCLIDGYFKSQNMK 114
           ++IT+  L+   C+ G ++ A  +  +ML          K  +++YS +IDG  K +   
Sbjct: 123 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 182

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A ++++EM    + P+++SY+ LI G C  G  E+A   F+  LD  + PDV T  +LI
Sbjct: 183 EARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLI 242

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +CK G+  EA +L + M+  G + D +  STL
Sbjct: 243 DMFCKEGKVIEANELLEVMVHRGCILDIVTYSTL 276



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 108/193 (55%), Gaps = 6/193 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML KE  +  A +L   +  RG  P+ +TY T++ G C  +R+ EA QLF K+  +   P
Sbjct: 718 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 777

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP------KANVVTYSCLIDGYFKSQNMK 114
           + +T+  L+   C+ G +  A  +  KML          K +V++YS +IDG  K     
Sbjct: 778 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 837

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            A ++++EM    + PN++SY+ LI G C+ G +E+A + F+  +D  +  + VTY+++I
Sbjct: 838 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897

Query: 175 RGYCKAGRPTEAM 187
            G+CK G+  +A+
Sbjct: 898 HGFCKEGQIDKAL 910



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 52/254 (20%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL---------TCVQ 57
            +  A +LF  +   G  PD I Y T++ G C   +++ A+ L +++          C+ 
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI- 343

Query: 58  LKPNSITFTILIDAFCKEG-----------------------------------RMDDAT 82
            +P+  T ++LID  CKEG                                   R+ +AT
Sbjct: 344 -RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN------ISPNIVSYS 136
            +F  M + G + + +TY  L+ G  ++ N+  A  +++EM  +         P ++SYS
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           I+IDGLCK    +EA   F       ++PDV++Y  LI G+C +G+  +A  L++ ML  
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 197 GIMPDGLLLSTLAD 210
           GI PD    S L D
Sbjct: 523 GIQPDVTTSSVLID 536



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 15/219 (6%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNT---------IICGYCSLNRLDEAVQLFEKLTCVQ 57
            ++  L     +  RG  PDI+TY+          +I   C   ++ EA +L E +    
Sbjct: 25  RVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 84

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
              + +T++ LI   C E R+ +AT +F  M + G + + +TY  L+ G  ++ N+  A 
Sbjct: 85  CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL 144

Query: 118 DVYEEMCENN------ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
            +++EM  +         P ++SYSI+IDGLCK    +EA   F       ++PDV++Y 
Sbjct: 145 QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYT 204

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            LI G+C +G+  +A  L++ ML  GI PD      L D
Sbjct: 205 SLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID 243



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 89/153 (58%), Gaps = 6/153 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------VQLKP 60
            +  A +LF ++   G  PD++TY T++ G C    +  A++L +K+           KP
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I+++I+ID  CK GR D+A  +F +M   G   NV++Y+ LI G+ +S  ++ A  ++
Sbjct: 819 DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLF 878

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
            EM +  +  N V+YS++I G CK G +++AL+
Sbjct: 879 NEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALF 911



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 48/256 (18%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF---EKLTCVQ 57
           M  KE  +  A +L   +  RG   DI+TY+T+I G C  +R+ EA QLF   +KL C  
Sbjct: 244 MFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRP 303

Query: 58  ---------------------------------------LKPNSITFTILIDAFCKEGRM 78
                                                  ++P+  T ++LID  CKEG++
Sbjct: 304 DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKV 363

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
            +A  +   M+++G   ++VTYS LI G      +  A  ++  M +    P+ ++Y  L
Sbjct: 364 IEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTL 423

Query: 139 IDGLCKRGLMEEALYAFHCALDN------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           + GLC+ G +  AL      L++         P +++Y+I+I G CK  R  EA +L++ 
Sbjct: 424 MKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEE 483

Query: 193 MLRNGIMPDGLLLSTL 208
           M   GIMPD +  +TL
Sbjct: 484 MKAQGIMPDVISYTTL 499



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 26/151 (17%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+S TF ILI+  C   R+++     + ++ +G   ++VTYS                
Sbjct: 6   LFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS---------------- 49

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
                     I P++ + S+LID LCK G + EA       +    + D+VTY+ LI+G 
Sbjct: 50  ----------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 99

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           C   R +EA  L+ SM + G  PD +   TL
Sbjct: 100 CMEHRISEATWLFMSMQKLGCRPDAITYGTL 130


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 35/237 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  AL   G++   G EP I+T+ +++ G+C +NR  EA+ L +++  +  +PN + + 
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188

Query: 67  ILIDAFCKEGRMDDA-----------------------TMMF------------SKMLEK 91
            +ID+ C++G+++ A                       T +F            S M+  
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +V+T+S LID Y K   +  A   Y EM + +++PNIV+Y+ LI+GLC  GL++EA
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +  +     P+ VTY  LI GYCKA R  + M++   M R+G+  D    +TL
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 105/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A K + ++  R + P+I+TYN++I G C    LDEA ++   L      PN++
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ +CK  R+DD   +   M   G   +  TY+ L  GY ++    +A  V   M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++ +++IL+DGLC  G + +AL        +  +  ++TY I+I+G CKA + 
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A  L+ S+   G+ PD
Sbjct: 446 EDAWYLFCSLALKGVSPD 463



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 1/194 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K+   L  +G  P+ +TYNT+I GYC   R+D+ +++   ++   +  ++ T+  
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L   +C+ G+   A  +  +M+  G   ++ T++ L+DG      +  A    E++ ++ 
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               I++Y+I+I GLCK   +E+A Y F       + PDV+TY  ++ G  +     EA 
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484

Query: 188 QLYDSMLR-NGIMP 200
           +LY  M + +G+MP
Sbjct: 485 ELYRKMQKEDGLMP 498



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 99/200 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF  + +    P I+ ++ ++     LN+ +  + LF  L  + +  +  +FT LID
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+  R+  A     KM++ G + ++VT+  L++G+        A  + +++      P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ +ID LC++G +  AL          + PDVVTY  LI     +G    + ++ 
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+R GI PD +  S L D
Sbjct: 243 SDMMRMGISPDVITFSALID 262



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 100/193 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +A + LF  L   G+  D+ ++ T+I  +C   RL  A+    K+  +  +P+ +TF  L
Sbjct: 96  EAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSL 155

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++ FC   R  +A  +  +++  G + NVV Y+ +ID   +   + +A DV + M +  I
Sbjct: 156 VNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ LI  L   G    +       +   + PDV+T++ LI  Y K G+  EA +
Sbjct: 216 RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275

Query: 189 LYDSMLRNGIMPD 201
            Y+ M++  + P+
Sbjct: 276 QYNEMIQRSVNPN 288



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 77/148 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D  +K+   ++  G++ D  TYNT+  GYC   +   A ++  ++    + P+  
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF IL+D  C  G++  A +    + +      ++TY+ +I G  K+  ++ A+ ++  +
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSL 455

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
               +SP++++Y  ++ GL ++ L  EA
Sbjct: 456 ALKGVSPDVITYITMMIGLRRKRLWREA 483


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKP 60
           L K   +  A ++  ++  +G +P++ T+  +I G C     ++A +LF KL      KP
Sbjct: 311 LCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKP 370

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T +I  +CKE +++ A M+ S+M E+G   N  TY+CLIDG+ K+ N + A+++ 
Sbjct: 371 NVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELM 430

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +   S NI +Y+  ID LCK+G   EA           L  D VTY ILI   C+ 
Sbjct: 431 DLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRR 490

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               EA+  +  M + G+ PD    +TL
Sbjct: 491 ADTREALVFFSKMFKAGVQPDMHTYNTL 518



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++  RG+ PD ++Y  +   YC + R+ +  +  + +       ++ T T++I 
Sbjct: 215 AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMIS 274

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC++G        F K +E G K N++ ++ LI+G  K  ++K AF++ EEM +    P
Sbjct: 275 TFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKP 334

Query: 131 NIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+ +++ LIDGLCK+G  E+A   F      +   P+V TY  +I GYCK  +   A  L
Sbjct: 335 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEML 394

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              M   G++P+    + L D
Sbjct: 395 LSRMKEQGLVPNTKTYTCLID 415



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + A +L   +   G   +I TYN  I   C   R  EA +L +K   + L+ +++
Sbjct: 419 KAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTV 478

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI   C+     +A + FSKM + G + ++ TY+ LI  + + + M+ +  ++ E 
Sbjct: 479 TYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEA 538

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P   +Y+ +I G C+   +  AL  F+   D+   PD +TY  LI G CK  + 
Sbjct: 539 VGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKL 598

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            EA QLY++M+  G+ P  +   TLA
Sbjct: 599 DEACQLYEAMVDKGLSPCEVTRLTLA 624



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 106/219 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+ A  L  ++ ++GL P+  TY  +I G+      ++A +L + +       N  
Sbjct: 384 KEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIF 443

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   ID+ CK+GR  +A  +  K    G +A+ VTY+ LI    +  + + A   + +M
Sbjct: 444 TYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKM 503

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++ +Y+ LI    ++  MEE+   F  A+   L+P   TY  +I GYC+    
Sbjct: 504 FKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNV 563

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + A++ ++ M  +G  PD L    L     + S   E C
Sbjct: 564 SLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEAC 602



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 94/192 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A KL  +    GL+ D +TY  +I   C      EA+  F K+    ++P+
Sbjct: 452 LCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPD 511

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI AF ++ RM+++  +F++ +  G      TY+ +I GY + +N+  A   + 
Sbjct: 512 MHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFN 571

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++  +P+ ++Y  LI GLCK   ++EA   +   +D  L P  VT   L   YCK  
Sbjct: 572 RMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQD 631

Query: 182 RPTEAMQLYDSM 193
               AM + + +
Sbjct: 632 DSATAMVILERL 643



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 95/186 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +  ++ + GL   + T N +      +  +  A  +F+++    + P+S+++ ++  
Sbjct: 180 AVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAI 239

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+C+ GR+ D       M+ +G   +  T + +I  + +       F  +++  E  + P
Sbjct: 240 AYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKP 299

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++++ LI+GLCKRG +++A       +     P+V T+  LI G CK G   +A +L+
Sbjct: 300 NLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLF 359

Query: 191 DSMLRN 196
             ++R+
Sbjct: 360 LKLVRS 365



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 32/152 (21%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ ++  ALK F +++D G  PD +TY  +I G C  ++LDEA QL+E +    L P  +
Sbjct: 559 RDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEV 618

Query: 64  T--------------------------------FTILIDAFCKEGRMDDATMMFSKMLEK 91
           T                                   LI   C E ++  A + F K+L+K
Sbjct: 619 TRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDK 678

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
               + VT +      ++S       D+ E +
Sbjct: 679 DQNVDRVTLTAFTTACYESNKYALVSDLSERI 710


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 174 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNG 233

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 234 VTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 293

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 294 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 353

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML   + PD
Sbjct: 354 SVDAEKMLREMLSVDLKPD 372



 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 140 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 199

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG  K+  +  A ++Y+ M
Sbjct: 200 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRM 259

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 260 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKPDKFTYTTLIDGCCK 315

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 316 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 344



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G C   R+D A+++++++    L P+
Sbjct: 208 LCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPD 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 268 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRK 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 328 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKG 387

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G  P      ++  YN+  +G
Sbjct: 388 DVWKGSKLLKEMQRDGHAP------SVVTYNVLMNG 417



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 103 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 162

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 163 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 222

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 223 EMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKG 282

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 283 DLKQAHDLIDEMSMKGLKPDKFTYTTLID 311



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G   DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 61  FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 180

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +ML +G+ PD    S L
Sbjct: 181 EGFRLKSAMLASGVQPDVYTYSVL 204


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 2/223 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+    D A   F      GL P++ TYN +I   C   + D+A +L   +      P+
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++  LI++  K G M DA  +F +M E+G   +V  Y+ LIDG+FK  ++ +A +++E
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 243

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + +  ++ PNI SY+++I+GLCK G  +E+   +H    N    D+ TY+ LI G C +
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           G    A ++Y  M  NG+ PD ++ +T+ +  L+ +G  E C+
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR-AGRIEECL 345



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ AL +  +  +   + D   Y+++I G C   RLDE   + +++T    KPN
Sbjct: 404 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 463

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I+ F +  +++DA   F  M+ KG    VVTY+ LI+G  K++    A+ + +
Sbjct: 464 PHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 523

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN+++YS+L++GLC+   ++ AL  +  AL+    PDV  + I+I G C +G
Sbjct: 524 EMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 583

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+QLY  M +   +P+ +  +TL +
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLME 612



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 109/196 (55%), Gaps = 3/196 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++   D A +L   + ++G  PD+ +Y T+I        + +A++LF+++    + P+  
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ILID F K+G + +A+ ++ ++L KGP    N+ +Y+ +I+G  K      +F+++ 
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N    ++ +YS LI GLC  G ++ A   +    +N + PDVV Y  ++ GY +AG
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339

Query: 182 RPTEAMQLYDSMLRNG 197
           R  E ++L+  M + G
Sbjct: 340 RIEECLELWKVMEKEG 355



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 104/195 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD    +  Q+T  G +P+    N +I G+   ++L++A++ F  +      P 
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K  R  +A  +  +ML KG K N++TYS L++G  + + +  A +++ 
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  E    P++  ++I+I GLC  G +E+AL  +        +P++VT+  L+ G+ K  
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618

Query: 182 RPTEAMQLYDSMLRN 196
               A +++D +L++
Sbjct: 619 DFERASKIWDHILQS 633



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 42/242 (17%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF---EKLTCVQLKPNSI 63
           +LD A +++ ++ + G+ PD++ YNT++ GY    R++E ++L+   EK  C  +    +
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV----V 360

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI    +  ++D+A  ++  + EK   A+ +TY  L+ G  K+  +  A  + EE 
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 124 CENNISPNIVSYSILIDGLCKRGL-----------------------------------M 148
                  +  +YS +I+GLC+ G                                    +
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+AL  F   +     P VVTY  LI G  KA R +EA  L   ML  G  P+ +  S L
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 209 AD 210
            +
Sbjct: 541 MN 542



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 73/130 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A  L  ++  +G +P++ITY+ ++ G C   +LD A+ L+ +      KP+
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                I+I   C  G+++DA  ++S+M ++    N+VT++ L++G++K ++ + A  +++
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWD 628

Query: 122 EMCENNISPN 131
            + ++  S N
Sbjct: 629 HILQSWSSSN 638


>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
          Length = 348

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 115/203 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  + G++   G EPD +T++T++ G C   R+ EAV + +++  ++++PN +T   
Sbjct: 132 LGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKVRPNLVTLNT 191

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C + ++ +A  +  +M+E G + +  TY  +++   KS N  SA D+  +M +  
Sbjct: 192 LVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALDLLRKMEDKK 251

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P +V+Y+++ID LCK G  +EAL  F+      +  DV+TY  LI G+C AGR  +  
Sbjct: 252 VKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGA 311

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           QL   M+   I P+ +  S L D
Sbjct: 312 QLLRDMITRNITPNVVTFSALID 334



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 93/178 (52%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+ +  ++ +  + P+++T NT++ G C  +++ EA  L +++     +P+  T
Sbjct: 164 EGRVSEAVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFT 223

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +++  CK G    A  +  KM +K  K  VVTY+ +ID   K+ N   A  ++ EM 
Sbjct: 224 YGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEME 283

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
              I  ++++Y+ LI G C  G  ++        +  ++ P+VVT++ LI  + K G+
Sbjct: 284 REGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGK 341



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 97/208 (46%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I +   D A+ LF  +      P II ++ +        + +  + L +++    +  + 
Sbjct: 57  IADIKKDDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSI 116

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T +I+I+ FC+  ++  A  +  K+L+ G + + VT+S L++G      +  A  + + 
Sbjct: 117 YTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDR 176

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  + PN+V+ + L++GLC +  + EA       +++   PD  TY  ++   CK+G 
Sbjct: 177 MVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGN 236

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A+ L   M    + P  +  + + D
Sbjct: 237 TVSALDLLRKMEDKKVKPQVVTYNMIID 264



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + D AL LF ++   G++ D+ITYN++I G+C+  R D+  QL   +    + PN
Sbjct: 266 LCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPN 325

Query: 62  SITFTILIDAFCKEGRM 78
            +TF+ LID F KEG++
Sbjct: 326 VVTFSALIDCFVKEGKL 342



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 78/158 (49%)

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
            +C+     ++++   + +   + + DDA  +F  M+   P  +++ +S L     K++ 
Sbjct: 37  FSCLNRSDRNLSYRERLSSGIADIKKDDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQ 96

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
            +    + ++M    I+ +I + SI+I+  C+R  +  A       L     PD VT++ 
Sbjct: 97  YELVLSLCKQMELQGIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFST 156

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L+ G C  GR +EA+ + D M+   + P+ + L+TL +
Sbjct: 157 LVNGLCLEGRVSEAVVIVDRMVEMKVRPNLVTLNTLVN 194


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 110/198 (55%)

Query: 11   ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            A +L   L   G+  D +TYN +I G C    L +A +L  K+    L+P+ IT+T LI 
Sbjct: 1384 AFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIH 1443

Query: 71   AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            A C+ G + +A  +F+ M+  G   + VT++ +I  Y +  N+ SA+  + +M E  + P
Sbjct: 1444 AHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEP 1503

Query: 131  NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            N ++Y++LI  LC+ G  + A + FH  L+  L+ +  TY +LI G CK G   +AM+ Y
Sbjct: 1504 NEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFY 1563

Query: 191  DSMLRNGIMPDGLLLSTL 208
              M +NGI PD L    L
Sbjct: 1564 FEMHQNGIHPDYLTHKAL 1581



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 35/242 (14%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L++   ++AA   F ++   GL PD+ITYN+++ GYC    L EA+ LF  L    L P 
Sbjct: 1235 LLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT 1294

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +T+ ILID +C+ G +++A ++  +M E+G   NV TY+ L+ G    +++  A + ++
Sbjct: 1295 VLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFD 1354

Query: 122  EMCENNISP-----------------------------------NIVSYSILIDGLCKRG 146
            EM    + P                                   + V+Y+ILI GLCK G
Sbjct: 1355 EMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTG 1414

Query: 147  LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             +++A       + N L PD +TY  LI  +C+ G   EA +++++M+ +G++P  +  +
Sbjct: 1415 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 1474

Query: 207  TL 208
             +
Sbjct: 1475 VI 1476



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 113/240 (47%), Gaps = 35/240 (14%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K  +L  AL LFG L   GL P ++TYN +I GYC L  L+EA  L E++      PN  
Sbjct: 1272 KAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVC 1331

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPK----------------------------- 94
            T+TIL+        +  A   F +ML KG +                             
Sbjct: 1332 TYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVL 1391

Query: 95   ------ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                  ++ VTY+ LI G  K+ N+K A ++  +M  N + P+ ++Y+ LI   C+RGL+
Sbjct: 1392 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLL 1451

Query: 149  EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA   F+  + + LLP  VT+ ++I  YC+ G    A   +  ML  G+ P+ +  + L
Sbjct: 1452 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 1511



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 3/196 (1%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK--PNSITFTILIDAFCK 74
            ++ + G+EP I+TYNT++  +    R D+   L +++        PN +T+ ++I    +
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168

Query: 75   EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            +G +++A  +   M     KA+  TY+ LI G      +K  +D+  EM    I P +V+
Sbjct: 1169 KGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 1227

Query: 135  YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            Y+ +I GL + GL+E A   F       LLPDV+TY  L+ GYCKAG   EA+ L+  + 
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287

Query: 195  RNGIMPDGLLLSTLAD 210
            R G+ P  L  + L D
Sbjct: 1288 RAGLAPTVLTYNILID 1303



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 98/176 (55%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  +L  A +L  ++   GL+PD ITY  +I  +C    L EA ++F  +    L P+
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++TFT++I A+C+ G +  A   F KMLE+G + N +TY+ LI    +    + A   + 
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 1529

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            EM E  +  N  +Y++LIDG CK G  E+A+  +     N + PD +T+  L++G+
Sbjct: 1530 EMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 35/220 (15%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            ++ + G+ P ++TYN +I G      ++ A   F ++  + L P+ IT+  L++ +CK G
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 1274

Query: 77   RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
             + +A ++F  +   G    V+TY+ LIDGY +  +++ A  + EEM E    PN+ +Y+
Sbjct: 1275 NLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYT 1334

Query: 137  ILIDGLCKRGLMEEALYAFHCALDNHLLP------------------------------- 165
            IL+ G      +  A   F   L   L P                               
Sbjct: 1335 ILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLE 1394

Query: 166  ----DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                D VTY ILI G CK G   +A +L   M+ NG+ PD
Sbjct: 1395 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 2    LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
             +KE   D    L  ++  RG    P+ +TYN +I G      L+EA +L E +   + K
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-K 1187

Query: 60   PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
             +S T+  LI      G +     +  +M  +G    VVTY+ +I G  +S  +++A   
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 120  YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            + EM    + P++++Y+ L++G CK G ++EAL  F       L P V+TY ILI GYC+
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 180  AGRPTEAMQLYDSMLRNGIMPD 201
             G   EA  L + M   G +P+
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPN 1329



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 9/144 (6%)

Query: 76   GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS--PNIV 133
             R DD   +  +MLE G + ++VTY+ L+D + K         + +EM        PN V
Sbjct: 1098 ARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDV 1157

Query: 134  SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            +Y+++I GL ++G +EEA       +         TY  LI G    G   +   L   M
Sbjct: 1158 TYNVVITGLTRKGDLEEAAELVE-GMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM 1216

Query: 194  LRNGIMPDGLLLSTLADYNLQSSG 217
               GIMP      T+  YN    G
Sbjct: 1217 ENEGIMP------TVVTYNAMIHG 1234


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 127/221 (57%), Gaps = 10/221 (4%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C L+ A+ L  ++ +  +  + + +N +I G C +  +++A+++  ++T   ++PN ITF
Sbjct: 219 CRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITF 278

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +ILID FC +G +  A  ++++M+ KG   +VVTY+ LIDG+ K  N K AF +++EM +
Sbjct: 279 SILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLD 338

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAF---------HCALDNHLL-PDVVTYAILIR 175
             +SPN+ + S +IDGL K G   +A+  F            +D+    P+ + YAILI+
Sbjct: 339 AGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQ 398

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           G C+ G   +A + +  M  NG  PD L+  T+   + QS 
Sbjct: 399 GLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSK 439



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 105/169 (62%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+  D++TYN +I G C + RL+EA+ L EK+  V++  NS+ F ++ID  CK G M+ A
Sbjct: 200 GIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKA 259

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S+M E+  + NV+T+S LIDG+    N+++A  +Y EM    I P++V+Y+ LIDG
Sbjct: 260 IEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDG 319

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            CK G  +EA       LD  L P++ T + +I G  K GR  +A++++
Sbjct: 320 HCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMF 368



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 114/210 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   L AA   F  +    + P+   YN++I GYC    L EA+ L  ++    +  
Sbjct: 144 VLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFS 203

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+ ILI   C   R+++A  +  KM E    AN V ++ +IDG  K  +M+ A +V 
Sbjct: 204 DVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVC 263

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M E  I PN++++SILIDG C +G +  A+  +   +   ++PDVVTY  LI G+CK 
Sbjct: 264 SQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKV 323

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA +L+  ML  G+ P+   +S + D
Sbjct: 324 GNTKEAFRLHKEMLDAGLSPNMFTVSCVID 353



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+++  Q+T+  +EP++IT++ +I G+C+   +  A+ L+ ++    + P+ +T+T 
Sbjct: 256 MEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTA 315

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LID  CK G   +A  +  +ML+ G   N+ T SC+IDG  K      A  ++       
Sbjct: 316 LIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAG 375

Query: 121 ---EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
              ++M     SPN + Y+ILI GLC+ G + +A   F     N   PD++ Y  +++ +
Sbjct: 376 YPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAH 435

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            ++    + M L+  M++ G++ +  +      Y + S G +E+
Sbjct: 436 FQSKHMIDVMMLHADMVKMGVIQNTFI------YRVLSRGYREN 473



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 108/207 (52%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L+  +   GL PD++T+ T+I     +  L  A   F  +    + PN   +  LI  +C
Sbjct: 122 LYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYC 181

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G + +A  +  +M   G  ++VVTY+ LI G      ++ A  + E+M E  +  N V
Sbjct: 182 KAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSV 241

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++++IDG CK G ME+A+       +  + P+V+T++ILI G+C  G    AM LY  M
Sbjct: 242 XFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEM 301

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  GI+PD +  + L D + +   ++E
Sbjct: 302 VIKGIVPDVVTYTALIDGHCKVGNTKE 328



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 11/201 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    D+  +++  +  R   P +ITY  ++   C+      A ++F+++    ++PN
Sbjct: 14  LVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLERGIEPN 73

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + +          G+M +A  +F +M E G    N+ TY  L+DGY    ++K  F +Y
Sbjct: 74  VVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLY 123

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +  + P++V+++ LID L K G ++ A   F       ++P+   Y  LI GYCKA
Sbjct: 124 CDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKA 183

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   EAM L   M R GI  D
Sbjct: 184 GDLLEAMWLRLEMERCGIFSD 204



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 10/152 (6%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------EKLTCVQLKP 60
           A +L  ++ D GL P++ T + +I G     R ++A+++F          +K+      P
Sbjct: 329 AFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSP 388

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NS+ + ILI   C++G +  AT  F++M   G K +++ Y  ++  +F+S++M     ++
Sbjct: 389 NSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLH 448

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            +M +  +  N   Y +L  G  + G ++ AL
Sbjct: 449 ADMVKMGVIQNTFIYRVLSRGYRENGYLKSAL 480



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 26/136 (19%)

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + L+ G  K+Q   S ++VY +M     SP +++Y IL++  C +G    A   F   L+
Sbjct: 8   NALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLE 67

Query: 161 NHLLPDVV--------------------------TYAILIRGYCKAGRPTEAMQLYDSML 194
             + P+VV                          TY  L+ GY   G       LY  ML
Sbjct: 68  RGIEPNVVIYGQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDML 127

Query: 195 RNGIMPDGLLLSTLAD 210
           + G+ PD +  +TL D
Sbjct: 128 KPGLYPDVVTFATLID 143



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 10/137 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGL----------EPDIITYNTIICGYCSLNRLDEAVQLFE 51
           L+K+   + A+K+F + T  G            P+ + Y  +I G C    + +A + F 
Sbjct: 355 LLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFA 414

Query: 52  KLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ 111
           ++     KP+ + +  ++ A  +   M D  M+ + M++ G   N   Y  L  GY ++ 
Sbjct: 415 EMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENG 474

Query: 112 NMKSAFDVYEEMCENNI 128
            +KSA    E + E  I
Sbjct: 475 YLKSALMCSEYLMEYGI 491


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   L+   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 188 IRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y  LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 368 SVDAEKMLREMLSVGLKPD 386



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  L+E  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
               + P++++Y+ LI GL K+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 274 LSQCLLPDLITYNTLIYGLXKKGDLKQA----HDLIDEMSMKGLKPDKFTYXTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTAL 358



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +++   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G  K G
Sbjct: 237 EMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD     TL D
Sbjct: 297 DLKQAHDLIDEMSMKGLKPDKFTYXTLID 325



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 62/141 (43%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ E  
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   E  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 197

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L  +ML +G+ PD    S L
Sbjct: 198 RLKSAMLASGVQPDVYTYSVL 218


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 106/181 (58%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
            G  PDI+TY+T+I  Y  +  L  A+++  ++    +K N+IT   ++DA CKE ++D+
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDE 469

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +     ++G   + VTY  LI GYF+ + ++ AF++++EM    I+P + +++ LI 
Sbjct: 470 AHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIG 529

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           GLC  G  E A+  F    ++ LLPD  T+  +I GYCK GR  +A + Y+  +++   P
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589

Query: 201 D 201
           D
Sbjct: 590 D 590



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 108/193 (55%), Gaps = 1/193 (0%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTIL 68
           +A ++F  +   G+  D+ T+N ++ GYC   +L++A+ + E++     + P+++T+  +
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTI 246

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + A  K+GR+ D   +   M   G   N VTY+ L+ GY K  ++K AF + E M + NI
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ +Y+ILI+G+C  G + E L          L PDVVTY  LI G  + G   EA +
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKK 366

Query: 189 LYDSMLRNGIMPD 201
           L + M  +G+ P+
Sbjct: 367 LMEQMENDGVKPN 379



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A  L      RG   D +TY T+I GY    ++++A ++++++  +++ P 
Sbjct: 461 LCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPT 520

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  LI   C  G+ + A   F ++ E G   +  T++ +I GY K   ++ AF+ Y 
Sbjct: 521 VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN 580

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E  +++  P+  + +IL++GLCK G+ E+AL  F+  +    + D VTY  +I  +CK  
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDK 639

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA  L   M    + PD
Sbjct: 640 KLKEAYDLLSEMEEKRLEPD 659



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 111/205 (54%), Gaps = 4/205 (1%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICG---YCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            AL++F ++    L+P+++T NT++ G   Y S   +  A ++F+ +  + +  +  TF 
Sbjct: 149 VALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFN 208

Query: 67  ILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +L++ +C EG+++DA  M  +M+ E     + VTY+ ++    K   +    D+  +M  
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKR 268

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N + PN V+Y+ L+ G CK G ++EA          ++LPD+ TY ILI G C AG   E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIRE 328

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++L D M    + PD +  +TL D
Sbjct: 329 GLELMDVMKSLKLQPDVVTYNTLID 353



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L     L   +   GL P+ +TYN ++ GYC L  L EA Q+ E +    + P+  
Sbjct: 252 KKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLC 311

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+  C  G + +   +   M     + +VVTY+ LIDG F+      A  + E+M
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
             + + PN V+++I +  LCK    EE        ++ H   PD+VTY  LI+ Y K G 
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            + A+++   M + GI  + + L+T+ D
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILD 459



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 4/149 (2%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH    + A++ F +L + GL PD  T+N+II GYC   R+++A + + +      KP++
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  IL++  CKEG  + A   F+ ++ +  + + VTY+ +I  + K + +K A+D+  E
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSE 650

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA 151
           M E  + P+  +Y+ +I  L + G + EA
Sbjct: 651 MEEKRLEPDRFTYNSIITSLMEDGKLSEA 679



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 15/150 (10%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L KE   + AL  F  L T+R  E D +TYNT+I  +C   +L EA  L  ++   +L+P
Sbjct: 601 LCKEGMTEKALNFFNTLITER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEP 658

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+  +I +  ++G++ +A  +  K            +S       ++ ++++  +  
Sbjct: 659 DRFTYNSIITSLMEDGKLSEADELLKK------------FSGKFGSMKRNLHLETEKNPA 706

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEE 150
               +  +    ++YS +I+ LC RG ++E
Sbjct: 707 TSESKEELKTEAIAYSDVINELCSRGRLKE 736



 Score = 40.4 bits (93), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 23/106 (21%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV------- 56
           K+  L  A  L  ++ ++ LEPD  TYN+II       +L EA +L +K +         
Sbjct: 637 KDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRN 696

Query: 57  ----------------QLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                           +LK  +I ++ +I+  C  GR+ + +  ++
Sbjct: 697 LHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRLKEHSTSYT 742


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 35/239 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL------ 58
           E  LD A   +  + ++G  P++I  + I+     L R+DEA  L +K+  + +      
Sbjct: 617 EGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGY 676

Query: 59  -----------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKML 89
                                         PNS+ + I I   CK G++DDA  +FS +L
Sbjct: 677 FDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLL 736

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +G   +  TY  LI GY  + N+  AF + +EM +  ++PNI++Y+ LI+GLCK G ++
Sbjct: 737 LRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLD 796

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            A   F       L P+V++Y ILI GYCK G   EA+ L + ML+ GI P  +  S L
Sbjct: 797 RAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSAL 855



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 106/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A K+F  L  RG  PD  TY T+I GY +   +++A  L +++    L PN
Sbjct: 719 LCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPN 778

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+  CK G +D A  +F K+  KG   NV++Y+ LIDGY K+ N + A D+  
Sbjct: 779 IITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRN 838

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ISP++++YS LI G CK+G M +A        +     ++  +  L+ G+ K G
Sbjct: 839 KMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCG 898

Query: 182 RPTEAMQLYDSM 193
              +  +L++ M
Sbjct: 899 EVKKIAKLHNMM 910



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 98/169 (57%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ + YN  I G C   ++D+A ++F  L      P++ T+  LI  +   G ++DA  +
Sbjct: 707 PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSL 766

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +ML++G   N++TY+ LI+G  KS N+  A  +++++    ++PN++SY+ILIDG CK
Sbjct: 767 RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCK 826

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            G   EAL   +  L   + P ++TY+ LI G+CK G   +A  L D M
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K      AL L+  +  RG       +NT+I G+C + ++ EA + F ++  +  +P
Sbjct: 473 LLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEP 532

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  LID +CK G +++A  +  KM ++    ++  Y+ LI G FKS+  +   D+ 
Sbjct: 533 DGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLL 592

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EMC   +SPN+V+Y  LI G C  G +++A  A+   ++    P+V+  + ++    + 
Sbjct: 593 SEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRL 652

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR  EA  L   M+   +  D
Sbjct: 653 GRIDEANMLLQKMVNLDVFLD 673



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 110/205 (53%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C +D A++L  ++ + GL  ++   N +I GYC   ++ EA +L  ++    L+P S ++
Sbjct: 338 CKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSY 397

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + L+D FC+EG +  A  ++++ML  G ++NVVT++ L+ G  +    + A  V+  M +
Sbjct: 398 STLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLK 457

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             ++P+ VSY  L+D L K G    AL  ++  L          +  +I G+CK  +  E
Sbjct: 458 RGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIE 517

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A + ++ M   G  PDG+   TL D
Sbjct: 518 AEETFNRMKELGFEPDGVTYRTLID 542



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 102/202 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + AL ++  +  RG+ PD ++Y T++     +     A+ L+  +       ++  F  
Sbjct: 445 FEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNT 504

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+ FCK  +M +A   F++M E G + + VTY  LIDGY K  N++ AF V E+M +  
Sbjct: 505 MINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEA 564

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+I  Y+ LI GL K     E +          L P+VVTY  LI G+C  GR  +A 
Sbjct: 565 ILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAF 624

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
             Y  M+  G  P+ ++ S + 
Sbjct: 625 TAYFDMIEKGFAPNVIICSKIV 646



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 6/203 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K       + L  ++  +GL P+++TY T+I G+C   RLD+A   +  +      PN
Sbjct: 579 LFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPN 638

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI---DGYFKSQNMKSAFD 118
            I  + ++ +  + GR+D+A M+  KM+      +   +  L    DG   SQ +    D
Sbjct: 639 VIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIA---D 695

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
             +E  ++   PN V Y+I I GLCK G +++A   F   L     PD  TY  LI GY 
Sbjct: 696 TLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYS 755

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
            AG   +A  L D ML+ G+ P+
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPN 778



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 36/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++     A+ ++  +   G+ PD+ T + ++  YC    ++ AV   +++  +  + N
Sbjct: 193 LVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELN 252

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT---------------------- 99
            +T+  LID     G M+ A M+   M E+G   N VT                      
Sbjct: 253 VVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312

Query: 100 --------------YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                         Y  LIDGY +   M  A  + +EM    +  N+   + LI+G CK 
Sbjct: 313 EMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKN 372

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           G + EA       +D  L P+  +Y+ L+ G+C+ G  T+A+ +Y+ MLR GI  +
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSN 428



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F  +   G  P + + N ++           A+ +++ +  + + P+  T +I+++
Sbjct: 167 ALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVN 226

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK+G ++ A     +M   G + NVVTY+ LIDG     +M+ A  V + M E  I  
Sbjct: 227 AYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILR 286

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N V+ ++LI G C++  +EEA            ++ D   Y +LI GYC+  +  +A++L
Sbjct: 287 NKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRL 346

Query: 190 YDSMLRNGI 198
            D ML  G+
Sbjct: 347 RDEMLNVGL 355



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 7/186 (3%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFE---KLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
            ++ I+  YC    +  A+ +F+   KL CV   P+  +   L+ +  ++G   +A +++
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCV---PSLRSCNRLLSSLVRKGESSNAILVY 206

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             +   G   +V T S +++ Y K   +  A D  +EM       N+V+Y+ LIDG    
Sbjct: 207 DHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSI 266

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN-GIMPDGLL 204
           G ME A        +  +L + VT  +LI+GYC+  +  EA ++   M R+ G++ D   
Sbjct: 267 GDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYA 326

Query: 205 LSTLAD 210
              L D
Sbjct: 327 YGVLID 332



 Score = 39.7 bits (91), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 43/90 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++   G+ P +ITY+ +I G+C    + +A  L +++  +    N   F  L++
Sbjct: 833 ALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVE 892

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
              K G +     + + M    P A V+++
Sbjct: 893 GHVKCGEVKKIAKLHNMMHITIPCAGVISH 922


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 13/215 (6%)

Query: 6   CH---LDAALK------LFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL 53
           CH   +D A+K      LFG   ++ D+GL PD + Y ++I  Y       ++ +  + +
Sbjct: 640 CHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLM 699

Query: 54  TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
              +  PN +T+T  ++  CK G +D A  +F KML      N VTY C +D   K  NM
Sbjct: 700 VTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNM 759

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           K A D++ EM +  ++ N  +Y+ILI G CK G + EA        +N + PD +TY+ +
Sbjct: 760 KEATDLHHEMLKGLLA-NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTI 818

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           I  +C++G    A++L+D+MLR G+ PD +  + L
Sbjct: 819 IYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 117/235 (49%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++D+A  L  +L   G  P++  YN +I   C    LD+A  L++ +  + L  N
Sbjct: 333 LRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLN 392

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV------------------------ 97
            +T++ILID+FCK G +D A   F +M+E G +  +                        
Sbjct: 393 DVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYT 452

Query: 98  -----------VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                       T++ LI GY K   ++ AF +Y EM E  I+P++ +++ LI GLC   
Sbjct: 453 KMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTN 512

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            M EA   F   ++  + P  VTY ++I GYCKA    +A +L + ML NG++PD
Sbjct: 513 EMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPD 567



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 107/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A   FG++ + G+   I  YN++I G+C    L  A  L+ K+    L+P + 
Sbjct: 405 KRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTAT 464

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI  +CK+ +++ A  ++ +M EK    +V T++ LI G   +  M  A  +++EM
Sbjct: 465 TFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEM 524

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I P  V+Y+++I+G CK   M++A       L N L+PD  TY  LI G C  GR 
Sbjct: 525 VERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRV 584

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A    D + +  +  + +  S L
Sbjct: 585 SAAKDFIDDLHKKNLKLNEMCYSAL 609



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 1/180 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++TY   + G C +  +D A  LFEK+    + PNS+T+   +D+  KEG M +AT +
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +ML KG  AN  TY+ LI G+ K   +  A  V  EM EN I P+ ++YS +I   C+
Sbjct: 766 HHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +  A+  +   L   + PD V + +LI G C  G   +A +L + ML  G+ P  +L
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQIL 884



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D A +L   +   GL PD  TY  +I G CS  R+  A    + L    LK N +
Sbjct: 545 KAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEM 604

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ L+  +C +GR+ +A     +M+++G   ++V ++ LIDG  K Q+MK  F + ++M
Sbjct: 605 CYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKM 664

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y+ +ID   K G  +++       +     P+VVTY   + G CK G  
Sbjct: 665 YDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEI 724

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A  L++ ML   I P+ +
Sbjct: 725 DRAGHLFEKMLTANISPNSV 744



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 109/207 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A KL+ ++ ++ + P + T+  +I G CS N + EA +LF+++   ++KP  +
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV 534

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ++I+ +CK   MD A  +   ML  G   +  TY  LI G   +  + +A D  +++
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL 594

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + N+  N + YS L+ G C +G + EAL A    +   +  D+V +A+LI G  K    
Sbjct: 595 HKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDM 654

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                L   M   G+ PD ++ +++ D
Sbjct: 655 KRLFGLLKKMYDQGLRPDSVIYTSMID 681



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 36/237 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ------------------ 48
            + AA      L  + L+ + + Y+ ++ GYC   RL EA+                   
Sbjct: 583 RVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHA 642

Query: 49  -----------------LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                            L +K+    L+P+S+ +T +IDA+ KEG    +      M+ +
Sbjct: 643 VLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTE 702

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               NVVTY+  ++G  K   +  A  ++E+M   NISPN V+Y   +D L K G M+EA
Sbjct: 703 KCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEA 762

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               H  L   LL +  TY ILIRG+CK GR  EA ++   M  NGI PD +  ST+
Sbjct: 763 TDLHHEMLKG-LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTI 818



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 106/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++   L ++GL+ D++TY T++ G+C + + D+ + L  ++  +   P     + L+D
Sbjct: 272 ALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVD 331

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K+G +D A  +  K+   G   N+  Y+ LI+   K +++  A  +Y+ M   N+  
Sbjct: 332 GLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPL 391

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+YSILID  CKRG+++ A   F   +++ +   +  Y  LI G+CK G  + A  LY
Sbjct: 392 NDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLY 451

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  G+ P     +TL
Sbjct: 452 TKMINEGLEPTATTFTTL 469



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 85/183 (46%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++ ++  Y    R+ +AV +   +    L P   T + +++   +  +      +F +
Sbjct: 149 LGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDE 208

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
            +  G K +  T S +I    + ++   A +    M  N    +IV+Y++LI GLCK G 
Sbjct: 209 SVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGG 268

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EAL       +  L  DVVTY  L+ G+C+  +  + + L + M+  G +P    +S 
Sbjct: 269 VLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSG 328

Query: 208 LAD 210
           L D
Sbjct: 329 LVD 331



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 83/188 (44%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P++ T + I+ G   + +     ++F++     +KP+  T + +I + C+      A 
Sbjct: 179 LLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAK 238

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
                M       ++VTY+ LI G  K   +  A +V + + E  +  ++V+Y  L+ G 
Sbjct: 239 EKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGF 298

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C+    ++ +   +  ++   +P     + L+ G  K G    A  L   + R G +P+ 
Sbjct: 299 CRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNL 358

Query: 203 LLLSTLAD 210
            + + L +
Sbjct: 359 FVYNALIN 366


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 2/223 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+    D A   F      GL P++ TYN +I   C   + D+A +L   +      P+
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++  LI++  K G M DA  +F +M E+G   +V  Y+ LIDG+FK  ++ +A +++E
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 243

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            + +  ++ PNI SY+++I+GLCK G  +E+   +H    N    D+ TY+ LI G C +
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           G    A ++Y  M  NG+ PD ++ +T+ +  L+ +G  E C+
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR-AGRIEECL 345



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ AL +  +  +   + D   Y+++I G C   RLDE   + +++T    KPN
Sbjct: 404 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 463

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I+ F +  +++DA   F  M+ KG    VVTY+ LI+G  K++    A+ + +
Sbjct: 464 PHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 523

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN+++YS+L++GLC+   ++ AL  +  AL+    PDV  + I+I G C +G
Sbjct: 524 EMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 583

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+QLY  M +   +P+ +  +TL +
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLME 612



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   L+ AL+ FG +  +G  P ++TYNT+I G     R  EA  L +++     KPN
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+++L++  C+  ++D A  ++ + LEKG K +V  ++ +I G   S  ++ A  +Y 
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    PN+V+++ L++G  K    E A   +   L     PD+++Y I ++G C   
Sbjct: 594 EMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCH 653

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R ++A+   +  +  G++P  +  + L
Sbjct: 654 RISDAVGFLNDAVDRGVLPTAITWNIL 680



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 109/196 (55%), Gaps = 3/196 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++   D A +L   + ++G  PD+ +Y T+I        + +A++LF+++    + P+  
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ILID F K+G + +A+ ++ ++L KGP    N+ +Y+ +I+G  K      +F+++ 
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N    ++ +YS LI GLC  G ++ A   +    +N + PDVV Y  ++ GY +AG
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339

Query: 182 RPTEAMQLYDSMLRNG 197
           R  E ++L+  M + G
Sbjct: 340 RIEECLELWKVMEKEG 355



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 106/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD    +  Q+T  G +P+    N +I G+   ++L++A++ F  +      P 
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K  R  +A  +  +ML KG K N++TYS L++G  + + +  A +++ 
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  E    P++  ++I+I GLC  G +E+AL  +        +P++VT+  L+ G+ K  
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A +++D +L+ G  PD
Sbjct: 619 DFERASKIWDHILQYGPQPD 638



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 42/242 (17%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF---EKLTCVQLKPNSI 63
           +LD A +++ ++ + G+ PD++ YNT++ GY    R++E ++L+   EK  C  +    +
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV----V 360

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI    +  ++D+A  ++  + EK   A+ +TY  L+ G  K+  +  A  + EE 
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 124 CENNISPNIVSYSILIDGLCKRGL-----------------------------------M 148
                  +  +YS +I+GLC+ G                                    +
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+AL  F   +     P VVTY  LI G  KA R +EA  L   ML  G  P+ +  S L
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 209 AD 210
            +
Sbjct: 541 MN 542


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 117/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE +L  A  L+ ++  R + P++ TYN++I G+C    L +A  +F+ +      P+
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI  FCK  R++D   +F +M  +G   +  TY+ LI GY ++  +  A  V+ 
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  +SP+IV+Y+IL+D LC  G +E+AL        + +  D++TY I+I+G C+  
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  L+ S+ R G+ PD +   T+
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITM 470



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 108/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L   +   G  P+++ YNT+I G C    L+ A+++F  +    ++ +++T+  LI 
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
                GR  DA  +   M+++    NV+ ++ LID + K  N+  A ++Y+EM   ++ P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+ LI+G C  G + +A Y F   +     PDVVTY  LI G+CK+ R  + M+L+
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G++ D    +TL
Sbjct: 348 CEMTYQGLVGDAFTYNTL 365



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 114/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL++F  +  +G+  D +TYNT+I G  +  R  +A +L   +   ++ PN
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I FT LID F KEG + +A  ++ +M+ +    NV TY+ LI+G+     +  A  +++
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++V+Y+ LI G CK   +E+ +  F       L+ D  TY  LI GYC+AG
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A ++++ M+  G+ PD +  + L D
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLD 402



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 112/193 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +F  +  +G  PD++TYNT+I G+C   R+++ ++LF ++T   L  ++ T+  
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C+ G+++ A  +F++M++ G   ++VTY+ L+D    +  ++ A  + E++ ++ 
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I++Y+I+I GLC+   ++EA   F       + PD + Y  +I G C+ G   EA 
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484

Query: 188 QLYDSMLRNGIMP 200
           +L   M  +G MP
Sbjct: 485 KLCRRMKEDGFMP 497



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 103/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A  LF ++      P I+ +  ++     +N+ D  + L+ K+  + +  +  +FTI
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC+  R+  A  +  KM++ G + ++VT   L++G+ +    + A  + + M    
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ +I+GLCK   +  AL  F+C     +  D VTY  LI G   +GR T+A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M++  I P+ +  + L D
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALID 262



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++  +KLF ++T +GL  D  TYNT+I GYC   +L+ A ++F ++    + P+ +
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D  C  G+++ A +M   + +     +++TY+ +I G  ++  +K A+ ++  +
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
               + P+ ++Y  +I GLC++GL  EA
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREA 483



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 104/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L+ ++ + G+  D+ ++  +I  +C  +RL  A+ L  K+  +  +P+ +T   
Sbjct: 95  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ FC+  R  +A  +   M   G   NVV Y+ +I+G  K++++ +A +V+  M +  
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  + V+Y+ LI GL   G   +A       +   + P+V+ +  LI  + K G   EA 
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            LY  M+R  ++P+    ++L +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLIN 297



 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 1/176 (0%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           + D+A  LF ++   +  P+ + FT ++    K  + D    ++ KM   G   ++ +++
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            LI  + +   +  A  +  +M +    P+IV+   L++G C+    +EA+         
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             +P+VV Y  +I G CK      A++++  M + GI  D +  +TL    L +SG
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS-GLSNSG 233



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 54/105 (51%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           AF ++ EM ++   P+IV ++ ++  + K    +  +Y +H   +  +  D+ ++ ILI 
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +C+  R + A+ L   M++ G  P  + L +L +   Q +  QE
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE 167


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 119/202 (58%), Gaps = 4/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +    ++ D+ITYNT+I GYC   ++DEA +L E +    +KPN
Sbjct: 493 LCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPN 552

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I+ +CK GR++DA  +F +M  KG    +VTYS ++ G F+++   +A ++Y 
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYL 612

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC--ALDNHLLPDVVTYAILIRGYCK 179
            M ++ I  +I +Y+I++ GLC+    ++AL  F     +D HL  +  T+ I+I    K
Sbjct: 613 WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHL--ENRTFNIMIDALLK 670

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            GR  EA  L+ S+L  G++P+
Sbjct: 671 GGRHDEAKDLFASLLARGLVPN 692



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 109/194 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  FG+L   GL PD + +  +I G C+ ++ D+A +L  ++    + PN+I F  
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CKEG +  A  +F  M+    + +V+TY+ LIDGY     +  A  + E M  + 
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V+Y+ +I+G CK G +E+A   F       + P +VTY+ +++G  +A R   A 
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608

Query: 188 QLYDSMLRNGIMPD 201
           +LY  M+++GI  D
Sbjct: 609 ELYLWMIKSGIKFD 622



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 1/191 (0%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           T  G  PD+++YNT+I G     R LD A  LF+++    L P+ +T+  +I A  K   
Sbjct: 194 TRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARA 253

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           MD A ++  +M++ G   N +T++ L+ GY  S     A  V++ MC + + P++ +Y+ 
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+  LCK G   EA   F   +     P+  TY  L+ GY   G   +   L D M+RNG
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG 373

Query: 198 IMPDGLLLSTL 208
           I PD  + + L
Sbjct: 374 IQPDHYIFNIL 384



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 35/237 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIIC------------------------------- 35
            LD A  LF Q+ D+GL PD++TYN+II                                
Sbjct: 218 QLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHN 277

Query: 36  ----GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
               GYCS  + ++A+ +F+++    ++P+  T+  L+   CK GR  +A  +F  M+++
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G K N  TY  L+ GY    ++     + + M  N I P+   ++ILI    K G +++A
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  F       L PD VTY I++   C  G+  +AM  +  ++  G+ PD ++   L
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNL 454



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 7/221 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
           HLD A    G++   G   + IT++ ++   C   R  EA+ +   ++  +   PN  ++
Sbjct: 106 HLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSY 165

Query: 66  TILIDAFCKEGRMDDA-----TMMFSKMLEKGPKANVVTYSCLIDGYFK-SQNMKSAFDV 119
           TIL+   C E R   A     TMM +     G   +VV+Y+ +I+G  +  + + +A+ +
Sbjct: 166 TILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHL 225

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +++M +  +SP++V+Y+ +I  L K   M++A       + N  +P+ +T+  L+ GYC 
Sbjct: 226 FDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCS 285

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +G+P +A+ ++  M R+G+ PD    +TL  Y  ++  S E
Sbjct: 286 SGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 105/195 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +   G++PD   +N +I  Y    ++D+A+ LF K+    L P+++T+ I++DA C
Sbjct: 365 LLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALC 424

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             G++DDA   F +++ +G   + V +  LI G         A ++  EM    I PN +
Sbjct: 425 MVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNI 484

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            ++ L++ LCK G++  A   F   +   +  DV+TY  LI GYC  G+  EA +L + M
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544

Query: 194 LRNGIMPDGLLLSTL 208
           + +G+ P+ +  +T+
Sbjct: 545 VLDGVKPNEVTYNTM 559



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ LF ++  +GL PD +TY  ++   C + ++D+A+  F +L    L P+++
Sbjct: 390 KHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAV 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  LI   C   + D A  +  +M+ +G   N + ++ L++   K   +  A ++++ M
Sbjct: 450 VFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++  ++++Y+ LIDG C  G ++EA       + + + P+ VTY  +I GYCK GR 
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRI 569

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L+  M   G+ P  +  ST+
Sbjct: 570 EDAFSLFRQMASKGVNPGIVTYSTI 594



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 104/201 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F ++   G+EPD+ TYNT++   C   R  EA ++F+ +     KPNS T+  L+ 
Sbjct: 292 AIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLH 351

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  EG +     +   M+  G + +   ++ LI  Y K   +  A  ++ +M    ++P
Sbjct: 352 GYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNP 411

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V+Y I++D LC  G +++A+  F   +   L PD V +  LI G C   +  +A +L 
Sbjct: 412 DTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELA 471

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M+  GI P+ +  +TL ++
Sbjct: 472 VEMIGRGICPNNIFFNTLLNH 492



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +  RG +P+  TY T++ GY +   L +   L + +    ++P+   F ILI 
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G++DDA ++FSKM  +G   + VTY  ++D       +  A   +  +    ++P
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V +  LI GLC R   ++A       +   + P+ + +  L+   CK G    A  ++
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+R  +  D +  +TL D
Sbjct: 507 DLMVRVDVQRDVITYNTLID 526



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 10/166 (6%)

Query: 46  AVQLFEKLTCV---QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           A+ LF ++  V   ++ PN IT++++ID   + G +D A     +++  G  A  +T+S 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 103 LIDGYFKSQNMKSAFDV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-- 159
           L+      +    A D+    M     +PN+ SY+IL+ GLC     ++AL+  H  +  
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191

Query: 160 ---DNHLLPDVVTYAILIRGYCKAGRPTE-AMQLYDSMLRNGIMPD 201
                   PDVV+Y  +I G  + GR  + A  L+D ML  G+ PD
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPD 237



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 78/142 (54%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +   G++ DI TYN I+ G C  N  D+A+++F+ L  +     + TF I+I
Sbjct: 606 AAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMI 665

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K GR D+A  +F+ +L +G   NVVTY  ++    +   ++   D++  + +N  +
Sbjct: 666 DALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCT 725

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
            N    + L+  L ++G + +A
Sbjct: 726 ANSRMLNALVGKLLQKGEVRKA 747



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 56/121 (46%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D AL++F  L       +  T+N +I       R DEA  LF  L    L PN +T+ ++
Sbjct: 640 DDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLM 699

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + +  ++G +++   +F  + + G  AN    + L+    +   ++ A     ++ ENN 
Sbjct: 700 MKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNF 759

Query: 129 S 129
           S
Sbjct: 760 S 760


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +L G +    + PD+ T++ +I G C   RLDE   LF+++    L PN +
Sbjct: 189 KAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT+LID  CK G++D A   F  ML +G + ++VTY+ LI+G  K  ++K A  +  EM
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+ ++++ LIDG CK G ME AL      ++  +  D V + +LI G C+ GR 
Sbjct: 309 SASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRV 368

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A ++   ML  G  PD    + + D
Sbjct: 369 HDAERMLRDMLSAGFKPDDPTYTMVVD 395



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 111/208 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   L+ +   + ++ D G  P+   +N ++ G+C +  +  A  +F+++    L+P  
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           ++F  LI   CK G +++   +   M  +    +V T+S LI+G  K   +     +++E
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           MC   + PN V++++LIDG CK G ++ AL  F   L   + PD+VTY  LI G CK G 
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             EA +L + M  +G+ PD +  +TL D
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLID 325



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 40/253 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK F  +  +G+ PD++TYN +I G C +  L EA +L  +++   L+P+ I
Sbjct: 259 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRI 318

Query: 64  TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
           TFT LID                                     C++GR+ DA  M   M
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L  G K +  TY+ ++D + K  N+   F + +EM  +   P +V+Y+ L++GLCK+G +
Sbjct: 379 LSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQV 438

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A       L+  + P+ +TY IL+ G+ K G   + + +++S    G++ D    S  
Sbjct: 439 KNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD-VDIFNS--EKGLVKD--YASYT 493

Query: 209 ADYNLQSSGSQEH 221
           A  N  S  S++H
Sbjct: 494 ALVNESSKTSKDH 506



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 107/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD    LF ++  +GL P+ +T+  +I G C   ++D A++ F+ +    ++P+
Sbjct: 222 LCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK G + +A  + ++M   G + + +T++ LIDG  K  +M+SA ++  
Sbjct: 282 LVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKR 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I  + V++++LI GLC+ G + +A       L     PD  TY +++  +CK G
Sbjct: 342 RMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M  +G +P
Sbjct: 402 NVXMGFKLLKEMQSDGHVP 420


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 115/198 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD A  L  ++  + + PDIITY ++I G   L++ ++   LF ++  + + P+  
Sbjct: 225 KDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVC 284

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  +ID  CKEG+++DA  + + M+EKG + N +TY+ ++DGY     M  A  +++ M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSM 344

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P+I+SY+ LI+G  ++  M++A+  F     N L P +VT ++L+RG  + GR 
Sbjct: 345 IDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRT 404

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A   +D M   G +P+
Sbjct: 405 ECAKIFFDEMQAAGHIPN 422



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 116/214 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A ++F  + D+G+EPDII+Y  +I GY    ++D+A+QLF +++   LKP+ +T +
Sbjct: 333 QMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCS 392

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+    + GR + A + F +M   G   N+ T+  L+ GYFK+  ++ A   + ++   
Sbjct: 393 VLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               NI  Y+ +I+GLCK G +++A   F       L PDV+TY  +I GYC+ G   EA
Sbjct: 453 REDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +   M  NG +PD    + +     +SS   E
Sbjct: 513 KDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSE 546



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L  E  +  A+ LF +L    + EPD + Y T++ G C      +A  L   +     KP
Sbjct: 152 LFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKP 211

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++  + I+IDAFCK+G +D AT + ++M +K    +++TY+ LIDG  K    +    ++
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLF 271

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM   NI P++ +++ +IDGLCK G +E+A       ++  + P+ +TY +++ GYC  
Sbjct: 272 LEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G+   A +++DSM+  GI PD
Sbjct: 332 GQMGRARRIFDSMIDKGIEPD 352



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFTILIDAFCKEGRMD 79
           +G+  + +T+ T+I G  + N++ +AV LF+KL    + +P+ + +  ++D  CK+G   
Sbjct: 136 KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQ 195

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
            A  +   M +   K +   Y+ +ID + K   +  A  +  EM + NI P+I++Y+ LI
Sbjct: 196 KAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLI 255

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGL K    E+    F   +  ++ PDV T+  +I G CK G+  +A ++   M+  G+ 
Sbjct: 256 DGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVE 315

Query: 200 PDGLLLSTLAD 210
           P+ +  + + D
Sbjct: 316 PNEITYNVVMD 326



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  LF Q+      P  ++++ ++     +      V +F ++  +++  ++   + 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++++ C   R D    + +   +KG   N VT++ LI G F    +K A  +++++   N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 128 I-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           I  P+ V Y  ++DGLCK+G  ++A             PD   Y I+I  +CK G    A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M +  I PD +  ++L D
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLID 256



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 77/149 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+  F +L  R  + +I  Y  +I G C   +LD+A   FEKL  + L P+ IT+T 
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +C+EG +D+A  M  KM + G   +  TY+ ++ G+F+S  +       +E+   +
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKS 558

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            S    +  +L+D + +   +   +  FH
Sbjct: 559 FSFEAATVELLMDIIAEDPSLLNMIPEFH 587



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A   F +L   GL PD+ITY  +I GYC    LDEA  +  K+      P+
Sbjct: 468 LCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPD 527

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           + T+ +++  F +  ++ +      ++  K       T   L+D
Sbjct: 528 NRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +      A+ L  ++    L PD+++YNT+I G+C    L++A+QL  ++       +
Sbjct: 152 LCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWS 211

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILIDAFCK G+MD+A  +  +M  KG +A+++ Y+ LI G+     +     +++
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFD 271

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E   SP  ++Y+ LI G CK G ++EA   F   ++  + P+V TY  LI G C  G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVG 331

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA+QL + ML+    P+
Sbjct: 332 KTKEALQLLNLMLQKDEEPN 351



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 106/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ L  ++  +GLE D+I Y ++I G+C    LD    LF+++      P +I
Sbjct: 224 KAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FCK GR+ +A+ +F  M+E+G + NV TY+ LIDG       K A  +   M
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + +  PN+V+Y+I+I+ LCK  L+ +AL            PD +TY  L+ G C  G  
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +L   ML++    D
Sbjct: 404 DEASKLLYLMLKDSSYTD 421



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 112/210 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  AL ++  L ++    DI+T N ++        +++A++L+++++  ++ PN
Sbjct: 434 LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPN 493

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T+T +ID FCK G ++ A  +  KM       +V  Y+CL+    K   +  A+ ++E
Sbjct: 494 SDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFE 553

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  ++  P+++S++I+IDG  K G ++ A           L PD+ TY+ LI  + K G
Sbjct: 554 EMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLG 613

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              EA+  +D M+ +G  PD  +  ++  Y
Sbjct: 614 YLDEAISFFDKMIDSGFEPDAHICDSVLKY 643



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 12/221 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-- 59
           L K+  +  AL++   +  R   PD ITYN+++ G C+   LDEA     KL  + LK  
Sbjct: 362 LCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEA----SKLLYLMLKDS 417

Query: 60  ----PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
               P+ I+F  LI   CK  R+  A  ++  ++EK    ++VT + L++   KS ++  
Sbjct: 418 SYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK 477

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILI 174
           A ++++++  + I PN  +Y+ +IDG CK G++  A     C +  + L P V  Y  L+
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA-KGLLCKMRLSELPPSVFDYNCLL 536

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
              CK G   +A +L++ M R+   PD +  + + D +L++
Sbjct: 537 SSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKA 577



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 93/181 (51%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RG   ++  YN ++ G C      +AV L  ++    L P+ +++  +I  FC+   ++ 
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  + ++M   G   ++VT+  LID + K+  M  A  + +EM    +  +++ Y+ LI 
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C  G ++     F   L+    P  +TY  LIRG+CK GR  EA ++++ M+  G+ P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315

Query: 201 D 201
           +
Sbjct: 316 N 316



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 113/218 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   ++ A++L+ Q+++  + P+  TY T+I G+C    L+ A  L  K+   +L P+ 
Sbjct: 470 LKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSV 529

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  L+ + CK+G +D A  +F +M       +V++++ +IDG  K+ ++KSA  +   
Sbjct: 530 FDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVG 589

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    +SP++ +YS LI+   K G ++EA+  F   +D+   PD      +++     G 
Sbjct: 590 MSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGE 649

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +  +    ++   ++ D  L  T+ DY   SSG+ +
Sbjct: 650 TDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMD 687



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A+ +F Q  D G        N +     S N  + A   + K+       N ++ +
Sbjct: 53  QLKNAVSVFQQAVDSGGSLSFAGNNLMATLVRSRNH-EVAFSFYRKMLETDTFINFVSLS 111

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++ F +  +   A  + + ML++G   NV  Y+ L+ G  ++     A  +  EM +N
Sbjct: 112 GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQN 171

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++ P++VSY+ +I G C+   +E+AL   +    +     +VT+ ILI  +CKAG+  EA
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M L   M   G+  D ++ ++L
Sbjct: 232 MGLLKEMKHKGLEADLIVYTSL 253


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 117/203 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +AA K+F  + D+ L+PD  TYN+ I   C   R++EA  +  KL    L PN++T+  
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  C +G +D A     +M+ +G  A+V TY+ LI   F  + ++ A D+ +EM E  
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y+I I+G C+ G  ++AL  F   ++ ++ P V TY  LI  + K  R +EA 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           + +   ++ G++PD ++ + L D
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALID 470



 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +E     A    G +   G++P+++TYNT+I GYC   + + A ++F+ +    LKP
Sbjct: 226 ILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKP 285

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+   I   CKE R+++A+ +  K+LE G   N VTY+ LIDG     ++  AF   
Sbjct: 286 DCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYR 345

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    I  ++ +Y++LI  L     +EEA        +  + PDVVTY I I GYC+ 
Sbjct: 346 DEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRC 405

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   +A+ L+D M+   I P     ++L D
Sbjct: 406 GNAKKALSLFDEMVEKNIRPTVETYTSLID 435



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  +  +L + GL P+ +TYN +I G C+   LD+A    +++    +  +
Sbjct: 297 LCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVAS 356

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ +LI A   E R+++A  M  +M EKG + +VVTY+  I+GY +  N K A  +++
Sbjct: 357 VFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD 416

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E NI P + +Y+ LID   KR  M EA   F  ++   +LPD++ +  LI G+C  G
Sbjct: 417 EMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNG 476

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A QL   M    ++PD +  +TL
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVTFNTL 503



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 116/211 (54%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ A  +  ++ ++G+EPD++TYN  I GYC      +A+ LF+++    ++P 
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LID F K  RM +A   F K +++G   +++ ++ LIDG+  + N+  AF + +
Sbjct: 427 VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+ V+++ L+ G C+   +EEA        +  + PD ++Y  LI GY K G
Sbjct: 487 EMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRG 546

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
              +A++++D ML  G  P      TL  YN
Sbjct: 547 DMKDALEVFDEMLSLGFDP------TLLTYN 571



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 100/193 (51%), Gaps = 10/193 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A + F +    G+ PDII +N +I G+C    +D A QL +++   ++ P+ +
Sbjct: 439 KRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEV 498

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+  +C+E ++++A  +  +M E+G K + ++Y+ LI GY K  +MK A +V++EM
Sbjct: 499 TFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P +++Y+ LI G  K G  + A           + PD  TY  +I         
Sbjct: 559 LSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVI--------- 609

Query: 184 TEAMQLYDSMLRN 196
            EAM+  D ++ N
Sbjct: 610 -EAMKTNDDLVEN 621



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 83/154 (53%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           A  ++E++  + +K + +TF I+I+  C+EG+   A      M   G K NVVTY+ +I+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           GY      ++A  +++ M + N+ P+  +Y+  I  LCK   +EEA       L++ L+P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           + VTY  LI G C  G   +A    D M+  GI+
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIV 354



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 91/183 (49%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++ ++  YC   + DEA++    +   ++ P + T   L+    K  ++  A  ++ +
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M++   K+++VT++ +I+   +    K A D    M    + PN+V+Y+ +I+G C RG 
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
            E A   F    D +L PD  TY   I   CK  R  EA  +   +L +G++P+ +  + 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 208 LAD 210
           L D
Sbjct: 328 LID 330



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 85/157 (54%), Gaps = 5/157 (3%)

Query: 49  LFEKLTCVQLKPN---SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           +F +L+  + + N   ++ F +L+ A+C+  + D+A    + M E        T + L+ 
Sbjct: 131 IFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLS 190

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLL 164
              K   +K A+ VYEEM + NI  +IV+++I+I+ LC+ G  ++A  +  H  +   + 
Sbjct: 191 LLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYG-VK 249

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           P+VVTY  +I GYC  G+   A +++ +M    + PD
Sbjct: 250 PNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPD 286


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 119/203 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A+K+F  +  +G  P++I+YNT+I GYC + R+D+A+ LF ++   +L P+++T++
Sbjct: 375 NMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 434

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C   R+ DA  +F +M+      N+VTY  L+D   K++ +  A  + + +  +
Sbjct: 435 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 494

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P+I   +I IDG+C+ G +E A   F       L PDV TY+I+I G C+ G   EA
Sbjct: 495 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 554

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
            +L+  M  NG   +G + +T+ 
Sbjct: 555 SKLFREMDENGCTLNGCIYNTIT 577



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 19/213 (8%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-------------------LDEAVQ 48
           +D A+K+F  +  +G  P++I+YNT+I GYC + R                   +DEAV+
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381

Query: 49  LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
           +F+ + C    PN I++  LI+ +CK  R+D A  +F +M  +    + VTYS LI G  
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
             + ++ A  ++ EM   +  PN+V+Y IL+D LCK   + EA+        ++L PD+ 
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              I I G C+AG    A  L+ ++   G+ PD
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 534



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C       L  ++ D  + PD++++NT++   C   ++ EA  + +K+    ++PN +T+
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ-------------- 111
           T L+D  C    MD+A  +F  M+ KG   NV++Y+ LI+GY K Q              
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDX 369

Query: 112 -----NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
                NM  A  V++ M      PN++SY+ LI+G CK   +++A+Y F       L+PD
Sbjct: 370 XCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPD 429

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            VTY+ LI G C   R  +A+ L+  M+    +P+ +    L DY
Sbjct: 430 TVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 112/206 (54%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++   G  PD++TY T+I G C +     A++L   +     +PN   
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +ID+ CK+ ++ +A  +FS+M+ KG   ++ TY+ LI         K    +  EM 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I P++VS++ ++D LCK G + EA       +   + P+VVTY  L+ G+C      
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA++++D+M+  G MP+ +  +TL +
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLIN 349



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 106/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H    L L  Q+   G+ P+I T + +I  +C LNR+  A  +  K+  +  +P++ TFT
Sbjct: 76  HHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFT 135

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C EG++ +A  +F KM+ +G + +VVTY  LI+G  K  N  +A  +   M + 
Sbjct: 136 TLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+ +Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C        
Sbjct: 196 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 255

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L + M+ + IMPD +  +T+ D
Sbjct: 256 ATLLNEMVDSKIMPDVVSFNTVVD 279



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 19/228 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +  AA++L G +  +  +P++  YNTII   C   ++ EA  LF ++    + P+
Sbjct: 176 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 235

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI A C          + ++M++     +VV+++ ++D   K   +  A DV +
Sbjct: 236 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 295

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ L+DG C    M+EA+  F   +    +P+V++Y  LI GYCK  
Sbjct: 296 KMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355

Query: 182 R-------------------PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R                     EA++++D+M+  G MP+ +  +TL +
Sbjct: 356 RIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 92/194 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F ++      P  + +N ++     +      + L  ++    + PN  T  I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + +  T++ LI G      +  A  ++++M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y  LI+GLCK G    A+      +  +  P+V  Y  +I   CK  + TEA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 188 QLYDSMLRNGIMPD 201
            L+  M+  GI PD
Sbjct: 222 NLFSEMVTKGISPD 235



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 86/183 (46%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +++N         N +D A+  F ++  +Q  P+++ F  L+ +  K         +  +
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G   N+ T   LI+ +     +  AF V  ++ +    P+  +++ LI G+C  G 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EAL+ F   +     PDVVTY  LI G CK G  + A++L  SM++    P+    +T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 208 LAD 210
           + D
Sbjct: 207 IID 209



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A+ L   +    L+PDI   N  I G C    L+ A  LF  L+   L+P+
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 534

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I+  C+ G +D+A+ +F +M E G   N   Y+ +  G+ ++     A  + +
Sbjct: 535 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 594

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S +  + ++ +  L   GL
Sbjct: 595 EMVARGFSADASTMTLFVKMLSDDGL 620


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 109/205 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA ++F ++  RG +PD  TY T+I G C L +  EA +LF+++      P+ +T++ 
Sbjct: 172 IDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSC 231

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C+ G +D+A  +F KM +K  + NV TYS L+DG  K+     A ++ E M    
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+YS LI+GLCK G + EA+          L PD   Y  +I G+C   +  EA 
Sbjct: 292 HKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAA 351

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYN 212
              D M+   I P+ +  S     N
Sbjct: 352 TYLDEMVLGQISPNRVTWSLHVKLN 376



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++D A+ LF ++  + +EP++ TY++++ G C      EA++L E +   + KPN +T++
Sbjct: 241 NVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYS 300

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CKEG++ +A     +M  +G K +   Y  +I+G+   +  + A    +EM   
Sbjct: 301 TLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLG 360

Query: 127 NISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            ISPN V++S+       ++ GLC  G +  +   +       +  D  T+  L++ +CK
Sbjct: 361 QISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCK 420

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   +A +++D M+ +G +PD  + S +
Sbjct: 421 KGDLHKAARIFDEMVLDGCVPDHGIWSAV 449



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF ++  +G  P ++TY+ ++ G C    +DEA+ LF+K+    ++PN  T++ L+D
Sbjct: 210 AKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMD 269

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G   +A  +   M+ K  K N+VTYS LI+G  K   +  A +  + M    + P
Sbjct: 270 GLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKP 329

Query: 131 NIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAI-------LIRGYCKAGR 182
           +   Y  +I+G C  R   E A Y     L   + P+ VT+++       +++G C  G 
Sbjct: 330 DAGLYGKIINGFCNIRKFQEAATYLDEMVL-GQISPNRVTWSLHVKLNNMVVQGLCTNGN 388

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + QLY  M   GI  D     +L
Sbjct: 389 LNRSFQLYIGMRTRGISIDAGTFDSL 414



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++ D G +P   +Y ++       N+L  A+  ++ +  + ++ + ++  +LI 
Sbjct: 104 AIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIK 163

Query: 71  AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           A CK  G +D A  +F +M ++G   +  TY  LI+G  K      A ++++EM     S
Sbjct: 164 ALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCS 223

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+YS L+ GLC+ G ++EA+  F       + P+V TY+ L+ G CK G   EAM+L
Sbjct: 224 PSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMEL 283

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            + M+R    P+ +  STL +
Sbjct: 284 LEMMVRKRHKPNMVTYSTLIN 304



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 1/190 (0%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +I  GY  ++   +A+++F K+     KP   ++  +     +E ++  A   +  M E 
Sbjct: 90  SICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREM 149

Query: 92  GPKANVVTYSCLIDGYFK-SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           G + +VV+ + LI    K S  + +AF+++ EM +    P+  +Y  LI+GLCK G   E
Sbjct: 150 GVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFE 209

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A   F         P VVTY+ L+ G C+AG   EAM L+D M +  I P+    S+L D
Sbjct: 210 AKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMD 269

Query: 211 YNLQSSGSQE 220
              ++ GS E
Sbjct: 270 GLCKNGGSLE 279



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 7/173 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A++   ++  +GL+PD   Y  II G+C++ +  EA    +++   Q+ PN
Sbjct: 306 LCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPN 365

Query: 62  SITFTI-------LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
            +T+++       ++   C  G ++ +  ++  M  +G   +  T+  L+  + K  ++ 
Sbjct: 366 RVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLH 425

Query: 115 SAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
            A  +++EM  +   P+   +S ++ G   R  + EA  +    L N  +  V
Sbjct: 426 KAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEFVEHV 478



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 1/154 (0%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
            + +  TF ++I           A  M ++M E+  +     +  +  GY +      A 
Sbjct: 46  FRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAI 105

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            V+ +M +    P   SY  +   L +   ++ A+  +    +  +   VV+  +LI+  
Sbjct: 106 RVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKAL 165

Query: 178 CK-AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK +G    A +++  M + G  PD     TL +
Sbjct: 166 CKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLIN 199


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 113/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   L+   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 186 IRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNG 245

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ +E
Sbjct: 246 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 305

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    +  + ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 306 MSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 365

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 366 SVDAEKMLREMLSVGLKPD 384



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 118/209 (56%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +   GL P +++YNT++ GY  L  L+E  +L   +    ++P+  
Sbjct: 152 KDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVY 211

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 212 TYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 271

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L  D +TY  LI G CK
Sbjct: 272 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDEMSMKGLKXDKITYTTLIDGCCK 327

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 328 EGDLDAAFEHRKRMIQENIRLDDVAYTAL 356



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 220 LCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 280 LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRK 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 340 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKG 399

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M RNG  P      ++  YN+  +G
Sbjct: 400 DVWKGSKLLKDMQRNGHAP------SVVTYNVLMNG 429



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 99/181 (54%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +N ++  +C    +  A  +F+ +    L+P+ +++  L++ + + G +++   + S ML
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
             G + +V TYS LI+G  K   M  A ++++EM    + PN V+++ LIDG CK G ++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            A+  +   L   LLPD++TY  LI G CK G   +A  L D M   G+  D +  +TL 
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 210 D 210
           D
Sbjct: 323 D 323


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 143 KDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVY 202

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE  MDDA  +F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 203 TYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQM 262

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+J++Y+ L+ GLCK+G + +A           L PD  TY  LI G CK G  
Sbjct: 263 LSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDL 322

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 323 DAAFEHRKRMIQENIRLDDVAYTAL 347



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 110/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  + +D+A +LF+++    L PN 
Sbjct: 177 IRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNX 236

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ L+ G  K  ++  A  + +E
Sbjct: 237 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDE 296

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 297 MXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 356

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 357 SXDAEKMLREMLSVGLKPD 375



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 113/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 211 LCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPD 270

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L+   CK+G ++ A  +  +M  KG K +  TY+ LIDG  K  ++ +AF+  +
Sbjct: 271 JITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRK 330

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 331 RMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 390

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +  +L   M RNG +P
Sbjct: 391 DVWKGSKLLKEMQRNGHVP 409



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 106 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPS 165

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 166 VVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFD 225

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A+  +   L   LLPD++TY  L+ G CK G
Sbjct: 226 EMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKG 285

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 286 DLNQAHGLIDEMXXKGLKPDKFTYTTLID 314



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 77/140 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  L  ++  +GL+PD  TY T+I G C    LD A +  +++    ++ +
Sbjct: 281 LCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLD 340

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI   C+EGR  DA  M  +ML  G K +  TY+ +I+ + K  ++     + +
Sbjct: 341 DVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 400

Query: 122 EMCENNISPNIVSYSILIDG 141
           EM  N   P +V+Y++L++G
Sbjct: 401 EMQRNGHVPXVVTYNVLMNG 420



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 64  FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL 123

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 124 ECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 183

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L  +M  +G+ PD    S L
Sbjct: 184 EGFRLKSAMRASGVQPDVYTYSVL 207


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 109/195 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++F  +  RG  PDI+ Y ++I G+C +  +++A+ L +++  V   P+ +T+T
Sbjct: 336 QMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWT 395

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC+ GR   A  +F  M + G   N+ T + ++DG  KSQ +  A  ++  M ++
Sbjct: 396 TLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  NIV YSI++DG+C  G +  AL  F C     L  +V  Y I+I G+ K G   +A
Sbjct: 456 NLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKA 515

Query: 187 MQLYDSMLRNGIMPD 201
             L  +M  NG MPD
Sbjct: 516 EDLLSNMEENGCMPD 530



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  AL L  +++ +G++P+++TY  +I G C+  R  EA  L +++  + + P+
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +  IL+D  CKEG++  A  +   M+  G   +V TY+ LID Y     M  A  V+E
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFE 345

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+IV+Y+ LI G CK   + +A++     +     PDVVT+  LI G+C+ G
Sbjct: 346 LMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVG 405

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           RP  A +L+ +M + G +P+
Sbjct: 406 RPLAAKELFLNMHKYGQVPN 425



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++K  H   A+ L  ++ +  G++PD    N +I   C L  +     +   +  + L+P
Sbjct: 85  IVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEP 144

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFTILI+  C +G +  A  +   + + G +++V TY  LI+G  K      A    
Sbjct: 145 SVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL 204

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M E N +PN+V YS ++DGLCK GL+ EAL          + P++VTY  LI+G C  
Sbjct: 205 RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNF 264

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  EA  L D M++ G+MPD   L+ L D
Sbjct: 265 GRWKEAGSLLDEMMKMGVMPDLQSLNILVD 294



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L   +   G   D+ TY  +I G C + +  EAV    K+      PN + ++ ++D
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G + +A  +  +M  KG K N+VTY+CLI G       K A  + +EM +  + P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284

Query: 131 NIVSYSILIDGLCKRG-----------------------------------LMEEALYAF 155
           ++ S +IL+D LCK G                                    M+EA   F
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +    LPD+V Y  LI G+CK     +AM L D M++ G  PD +  +TL
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTL 397



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 113/198 (57%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE  +  A  + G +   G  PD+ TYN++I  YC  N++DEA ++FE +      P
Sbjct: 295 VLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLP 354

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +T LI  +CK   ++ A  +  +M++ G   +VVT++ LI G+ +     +A +++
Sbjct: 355 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M +    PN+ + +I++DGLCK  L+ EAL  FH    ++L  ++V Y+I++ G C A
Sbjct: 415 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 474

Query: 181 GRPTEAMQLYDSMLRNGI 198
           G+   A++L+  +   G+
Sbjct: 475 GKLNTALELFSCLPAKGL 492



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 4/214 (1%)

Query: 6   CHLDA---ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL        + G +   GLEP ++T+  +I G C    +  AV+L + +     + + 
Sbjct: 122 CHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDV 181

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ +LI+  CK G+  +A     KM E+    NVV YS ++DG  K   +  A  +  E
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I PN+V+Y+ LI GLC  G  +EA       +   ++PD+ +  IL+   CK G+
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 215
             +A  +   M+  G +PD    ++L D Y LQ+
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQN 335



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 103/214 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A+ L  ++   G  PD++T+ T+I G+C + R   A +LF  +      PN  T  
Sbjct: 371 NINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCA 430

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++D  CK   + +A  +F  M +     N+V YS ++DG   +  + +A +++  +   
Sbjct: 431 IILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAK 490

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N+ +Y+I+I+G  K+GL+++A        +N  +PD  TY + ++G         +
Sbjct: 491 GLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARS 550

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++    M   G   D      + +Y   + G  E
Sbjct: 551 IKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNE 584



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  AL LF  +    L+ +I+ Y+ I+ G CS  +L+ A++LF  L    L+ N
Sbjct: 436 LCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQIN 495

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +TI+I+ F K+G +D A  + S M E G   +  TY+  + G    + +  +     
Sbjct: 496 VYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLT 555

Query: 122 EMCENNISPNIVSYSILIDGL 142
            M +   S +  +  ++I+ L
Sbjct: 556 MMRDKGFSVDATTTEMIINYL 576


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A++++  + + G++P I+TYNT++  YC   ++ + + L  ++      PN +T+ +
Sbjct: 521 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 580

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+   K+G  + A  +  +ML+ G K +  TY+ LI GYF    +  A  + EEM    
Sbjct: 581 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKG 640

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP + +Y+  I GLCK G M +A+      L N+LLPDVV+Y  LI GYC+ G   +A 
Sbjct: 641 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 700

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+D +    + P  +  +TL D
Sbjct: 701 LLFDELRSIYLFPTIVTYNTLLD 723



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 109/206 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   + A  L G++   GL+    TYN +I GY +   L EA+ L E++      P 
Sbjct: 585 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPT 644

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+   I   CK GRM DA    S ML      +VV+Y+ LI GY +  N+  AF +++
Sbjct: 645 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 704

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P IV+Y+ L+DGLC++G +E A       ++  + PD+VTY IL+ G CK G
Sbjct: 705 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 764

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLST 207
             + A + +D ML  G+  D    +T
Sbjct: 765 SLSMAQEFFDEMLHEGLELDSYAYAT 790



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 103/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L  ++  +G  P + TYN+ I G C L R+ +A+Q    +    L P+ +++  
Sbjct: 626 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 685

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  +C+ G +  A ++F ++        +VTY+ L+DG  +   ++ A  +  EM    
Sbjct: 686 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 745

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P+IV+Y+IL++G CK G +  A   F   L   L  D   YA  I G  K G  + A 
Sbjct: 746 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 805

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L + ML  G  PD ++ + + D
Sbjct: 806 SLQEEMLAKGFPPDLIIYNVVVD 828



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 3/187 (1%)

Query: 6   CHLDAALKLFGQLTD---RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C L        QL+D     L PD+++YNT+I GYC L  L +A  LF++L  + L P  
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  L+D  C++G ++ A  +  +M+ +G   ++VTY+ L++G  K  ++  A + ++E
Sbjct: 716 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 775

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    +  +  +Y+  I G  K G    A       L     PD++ Y +++ G CK G 
Sbjct: 776 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 835

Query: 183 PTEAMQL 189
             EA +L
Sbjct: 836 LEEASEL 842



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 64/121 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L+ A +L  ++ + G+ PDI+TY  ++ G C +  L  A + F+++    L+ +
Sbjct: 725 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELD 784

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S  +   I    K G    A  +  +ML KG   +++ Y+ ++DG  K  N++ A ++ +
Sbjct: 785 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 844

Query: 122 E 122
           +
Sbjct: 845 K 845



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 56/108 (51%)

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LI  Y K   ++    V+++M ++ +SP++ + + ++  L  + LM +A+  +    +  
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + P +VTY  L+  YCK G+  + + L   M R G  P+ +  + L +
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 583


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 1/213 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+ +F ++   G  P++ITYNT+I GYC    L+ A++L E +    LKP++ T+T 
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F + G+++ AT +F  M+E G   N VTY+ +IDGYF    +  A  ++ +M E+ 
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +Y+++I G  K   + EA       +   LLP+V+TY   I G C+ GR   A 
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +++  M +    P+    S+L  Y L   G  E
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLI-YGLCQEGRAE 639



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 2/196 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF  + + G+ P+ +TY  II GY +L ++D+A+ LF K+      P+S T+ +
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  F K   + +A     KM+++G   NV+TY+  IDG  ++     AF ++ EM + N
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA-LYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTE 185
             PN+ +YS LI GLC+ G  E+A +Y     L ++   P+V TY  L++G C  GR  E
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 186 AMQLYDSMLRNGIMPD 201
           A QL  SM + G+ P 
Sbjct: 678 ADQLVVSMQKKGLQPS 693



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 1/192 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L+ A++L   +   GL+PD  TY  +I G+    +L+ A  LF  +    + PN +
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID +    ++DDA  +F KM+E G   +  TY+ +I G+ K+ ++  A +   +M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN+++Y+  IDGLC+ G    A   FH     +  P++ TY+ LI G C+ GR 
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 184 TEAMQLYDSMLR 195
            +A ++Y+ + R
Sbjct: 639 EDA-EMYNLLAR 649



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 110/202 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  +F ++   G +P+ +TY+T+I G CS  RL+EA+ + E++    ++P   T+T
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I + + C  G   +A  +  KM ++G   N+ T++ LI G  +    + A  +Y +M  +
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P  V+Y+ LI+ LC  G  E A   F   L +  LP   TY  +I+ +C  G   +A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M ++D ML+ G  P+ +  +TL
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTL 453



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 107/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L G++  RG  P+I T+  +I G     + + A+ L+ K+    L P ++T+  LI+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C EGR + A  +F  ML  G   +  TY+ +I  +    +++ A  ++++M +   SP
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LI G CK+G +  A+        N L PD  TY  LI G+ + G+   A  L+
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+ +GI P+ +  + + D
Sbjct: 506 YGMMEHGISPNHVTYTAIID 525



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++   + A+ L+ ++   GL P  +TYN +I   C   R + A  +F+ +      P+
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  +I  FC  G +  A ++F KML+ G   NV+TY+ LI GY K  N+ +A  + E
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE 471

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N + P+  +Y+ LI G  + G +E A   F+  +++ + P+ VTY  +I GY    
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  +A+ L+  M+ +G +P          YN+  SG
Sbjct: 532 KVDDALALFWKMVESGNLPSS------QTYNVMISG 561



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 108/206 (52%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E   + A  +F  +   G  P   TYN II  +C +  + +A+ +F+K+      PN IT
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +CK+G +++A  +   M   G K +  TY+ LI G+ +   ++ A  ++  M 
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ ISPN V+Y+ +IDG      +++AL  F   +++  LP   TY ++I G+ K    +
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA      M++ G++P+ +  ++  D
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFID 595



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 96/177 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+  TY ++I G+C  + LD A  +F+++      PNS+T++ LI+  C EGR+++A  M
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M++KG +  V TY+  +     +     A ++  +M +    PNI +++ LI GL +
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G  E A+  +H  L + L+P  VTY  LI   C  GR   A  ++  ML +G +P 
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 1   MLIKECHLDAALKLFGQ-LTDRGLEPD----IITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           ++IK C  +  +K   Q L++   + D    + ++ T++      + +D A  ++ K+  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
             ++P+ +TF  +I+  CK+GR+ +A ++ S +       N  TY+ LI G+ ++ N+  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           AF +++ M ++   PN V+YS LI+GLC  G +EEA+      +   + P V TY I + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD 201
             C AG  +EA++L   M + G +P+
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPN 341



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 2/185 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA--VQLFEKLTCVQLKPNSITFTIL 68
           A K+F ++  R   P++ TY+++I G C   R ++A    L  +LT    +PN  T+T L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C EGR  +A  +   M +KG + +   Y  L+ G  K+  ++SA +++  M     
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++  Y  LI  LCK   +EEA   F   L+ H   D V + +L+ G  K G     ++
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLK 785

Query: 189 LYDSM 193
           L   M
Sbjct: 786 LLHVM 790



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 78/162 (48%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  +LT  G EP++ TY T++ G C   R  EA QL   +    L+P+   +  L+   C
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  +++ A  +F  M   G + ++  Y  LI    K   ++ A  +++ M E + + + V
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
            +++L+DGL K G  +  L   H     +   +  TY +L R
Sbjct: 766 VWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+Y +M  + I P++++++ +I+ LCK+G ++EA             P+  TY  LI 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+C+      A  ++D M+++G  P+ +  STL +
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLIN 280



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +  +GL+P    Y  ++ G C   +++ A+ +F  +  +  + +   +  LI 
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKE  +++A  +F  MLEK   ++ V ++ L+DG  K         +   M   N + 
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTL 797

Query: 131 NIVSYSIL 138
           N  +Y +L
Sbjct: 798 NFQTYVML 805



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +LI EC    +++AL +F  +   G +  +  Y  +IC  C  N ++EA  +F+ +    
Sbjct: 700 LLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH 759

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
              + + +T+L+D   KEG  D    +   M  +    N  TY  L
Sbjct: 760 WNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A +LF  ++ RG+ P++ +Y  +I G C    +DEA  LF+++    + P+
Sbjct: 170 LVKE--VNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPD 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  LID  CK  R+ D      +M ++G  AN++TY+ L+DG  K+  +  A  +  
Sbjct: 228 TVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLT 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++    I PNI +Y+IL+DGLCK G + +A   +   L+     D   Y ++I G CK G
Sbjct: 288 KIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEG 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              EA+ L   M  N   PDG+
Sbjct: 348 FLDEALSLLSKMEDNKCTPDGV 369



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 14/211 (6%)

Query: 14  LFGQLTDRGLEPDIITYNTIIC--------------GYCSLNRLDEAVQLFEKLTCVQLK 59
           L+ ++ D+ + PD++TYNT+I               G+  L ++ EAV L  ++T   + 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN  TFT L+D  CK+G +  A  + + M+++  + N+VTY+ L+DGYF  + +  A  +
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +  +    ++PN+ SY ++I+GLCK  +++EA   F      +++PD V Y  LI G CK
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + R  +       M   G   + +  ++L D
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLD 271



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 115/209 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +   +  + +EP+I+TYN+++ GY  +  +++A QLF  ++   + PN
Sbjct: 133 LCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPN 192

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ++I+  CK   +D+A  +F +M  K    + V Y+ LIDG  KS+ +   +D   
Sbjct: 193 VRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIG 252

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +     NI++Y+ L+DGLCK   +++A+       +  + P++ TY IL+ G CK G
Sbjct: 253 EMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNG 312

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A ++Y  +L  G   D  + + + +
Sbjct: 313 RLRDAQEVYQDLLNKGYQLDARIYTVMIN 341



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 1/142 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
             G++ DRG   +IITYN+++ G C  +++D+A+ L  K+    ++PN  T+TIL+D  C
Sbjct: 250 FIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLC 309

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K GR+ DA  ++  +L KG + +   Y+ +I+G  K   +  A  +  +M +N  +P+ V
Sbjct: 310 KNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGV 369

Query: 134 SYSILIDGLCKRGLMEEALYAF 155
           +Y I I  L +     E LY F
Sbjct: 370 TYEITIRALFESD-RNEILYIF 390



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 14/158 (8%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI------------- 104
           +KP+ + +  +ID  CK+  + D   ++S+M++K    +VVTY+ LI             
Sbjct: 35  VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRK 94

Query: 105 -DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
             G+     MK A  +  +M    ++PNI +++ L+DGLCK G +++A       +   +
Sbjct: 95  EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            P++VTY  L+ GY       +A QL++++   G+ P+
Sbjct: 155 EPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPN 192



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 14/97 (14%)

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI------------- 174
           + P++V Y+ +ID LCK  L+ +    +   +D  + PDVVTY  LI             
Sbjct: 35  VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRK 94

Query: 175 -RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             G+   G+  EA+ L + M    + P+    +TL D
Sbjct: 95  EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVD 131


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 1/198 (0%)

Query: 15  FGQLTDRGLE-PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           F Q  D   E P+++ Y  ++ G+C L+R++EA +L + ++    +PN I +  LID  C
Sbjct: 627 FKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 686

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G++D+A  + ++M E G  A + TYS LID YFK +    A  V  +M EN+ +PN+V
Sbjct: 687 KVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 746

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            Y+ +IDGLCK G  +EA        +    P+VVTY  +I G+ + G+    ++L + M
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM 806

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+ P+ +    L D+
Sbjct: 807 GSKGVAPNYVTYRVLIDH 824



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 17/219 (7%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +  ++  +G  PD  TY+ ++   C+ ++++ A  LFE++    L  +  T+TI+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D+FCK G ++ A   F++M E G   NVVTY+ LI  Y K++ +  A +++E M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CAL---------------DNHLLPDVVTYA 171
            PNIV+YS LIDG CK G ME+A   F   C                 DN   P+VV Y 
Sbjct: 585 LPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYG 644

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G+CK  R  EA +L D+M   G  P+ ++   L D
Sbjct: 645 ALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALID 683



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 17/220 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  LF ++   GL  D+ TY  ++  +C    +++A + F ++  V   PN +T+T 
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
           LI A+ K  ++  A  +F  ML +G   N+VTYS LIDG+ K+  M+ A  ++E MC   
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618

Query: 125 --------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
                         +N+  PN+V Y  L+DG CK   +EEA             P+ + Y
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVY 678

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             LI G CK G+  EA ++   M  +G        S+L D
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLID 718



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A ++  ++++ G    + TY+++I  Y  + R D A ++  K+      PN
Sbjct: 685 LCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 744

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T +ID  CK G+ D+A  +   M EKG + NVVTY+ +IDG+ +   +++  ++ E
Sbjct: 745 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLE 804

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN V+Y +LID  CK G ++ A          H       Y  +I G+ K  
Sbjct: 805 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEF 864

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              E++ L D + ++   P   L   L D
Sbjct: 865 --IESLGLLDEIGQDDTAPFLSLYRLLVD 891



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 95/187 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A KL   ++  G EP+ I Y+ +I G C + +LDEA ++  +++         T++
Sbjct: 655 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYS 714

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID + K  R D A+ + SKMLE     NVV Y+ +IDG  K      A+ + + M E 
Sbjct: 715 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 774

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+Y+ +IDG  + G +E  L          + P+ VTY +LI   CK G    A
Sbjct: 775 GCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 834

Query: 187 MQLYDSM 193
             L + M
Sbjct: 835 HNLLEEM 841



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 105/197 (53%), Gaps = 1/197 (0%)

Query: 6   CHL-DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           CHL + A K + ++   G+  + I  ++     CS  + ++A  +  ++      P++ T
Sbjct: 426 CHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           ++ ++   C   +M+ A ++F +M   G  A+V TY+ ++D + K+  ++ A   + EM 
Sbjct: 486 YSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E   +PN+V+Y+ LI    K   +  A   F   L    LP++VTY+ LI G+CKAG+  
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQME 605

Query: 185 EAMQLYDSMLRNGIMPD 201
           +A Q+++ M  +  +PD
Sbjct: 606 KACQIFERMCGSKDVPD 622



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 6/218 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC------SLNRLDEAVQLFEKLTCVQLKPNSIT 64
           A KL  ++   G  P  + YN +I   C      S + L+ A + + ++    +  N I 
Sbjct: 391 AYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKIN 450

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +      C  G+ + A  +  +M+ +G   +  TYS ++     +  M+ AF ++EEM 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMK 510

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              +  ++ +Y+I++D  CK GL+E+A   F+   +    P+VVTY  LI  Y KA + +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A +L+++ML  G +P+ +  S L D + ++   ++ C
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKAC 608



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 101/195 (51%), Gaps = 4/195 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A KL   + ++G +P+++TY  +I G+  + +++  ++L E++    + PN +T+ +L
Sbjct: 762 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVL 821

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CK G +D A  +  +M +     +   Y  +I+G+  ++    +  + +E+ +++ 
Sbjct: 822 IDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 879

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +P +  Y +L+D L K   +E AL            L+    TY  LI   C A +  +A
Sbjct: 880 APFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKA 939

Query: 187 MQLYDSMLRNGIMPD 201
            +L+  M + G++P+
Sbjct: 940 FRLFSEMSKKGVIPE 954



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + Y  +I G C  +  +EA+    ++      PN +T++ L+     + ++     +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + M+ +G   +   ++ L+  Y  S +   A+ + ++M +   +P  V Y+ILI  +C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICG 419

Query: 145 RG------LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
                   L+E A  A+   L   ++ + +  +   R  C AG+  +A  +   M+  G 
Sbjct: 420 DKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479

Query: 199 MPDGLLLSTLADY 211
           +PD    S +  Y
Sbjct: 480 IPDTSTYSKVLGY 492



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 3/179 (1%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++  YC       A++   +L   + +P+  T+  LI AF K   +D A+++  +M  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
              + +  T  C      K    + A  + E     N  P+ V Y+ LI GLC+  L EE
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMET---ENFVPDTVFYTKLISGLCEASLFEE 320

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           A+   +       LP+VVTY+ L+ G     +     ++ + M+  G  P   + ++L 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 3/190 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+  G+L D    P   TYN +I  +   + LD A  +  +++   L+ +  T      
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAY 278

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK G+  +A  +   M  +    + V Y+ LI G  ++   + A D    M   +  P
Sbjct: 279 SLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+YS L+ G   +  +       +  +     P    +  L+  YC +G  + A +L 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 191 DSMLRNGIMP 200
             M++ G  P
Sbjct: 396 KKMVKCGHTP 405



 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC--VQLKPNSITFTIL 68
           +L L  ++      P +  Y  ++       RL+ A++L E++      L   S T+  L
Sbjct: 867 SLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 926

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           I++ C   ++D A  +FS+M +KG    + T+  LI G F++  +  A 
Sbjct: 927 IESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 2   LIKECHLDAALKLFGQLT--DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           LIK   L+ AL+L  ++      L     TYN++I   C  N++D+A +LF +++   + 
Sbjct: 893 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVI 952

Query: 60  PNSITFTILIDAFCKEGRMDDATMMF 85
           P   TF  LI    +  ++ +A ++ 
Sbjct: 953 PEMQTFCSLIKGLFRNSKISEALLLL 978


>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
          Length = 552

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 117/215 (54%), Gaps = 10/215 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A K+  ++   GL  +   Y+T+I G+C    +D A++++E +    ++PN
Sbjct: 233 LVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPN 292

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ +I      G+M +A ++F +M++     N++TY  +I GYFK  +   A  V+E
Sbjct: 293 VVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWE 352

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN VSYSILI+GLC  G +++A+  +   LD    PD + Y  +I+G C +G
Sbjct: 353 EMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSG 412

Query: 182 RPTEAMQLYDSMLRNG----------IMPDGLLLS 206
                ++L+  ML +G          ++ DGLLL+
Sbjct: 413 MVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLA 447



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++   +  A KLF  +  +G  P   TYN ++ G     R   A+ +  ++    + P 
Sbjct: 163 MLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPG 222

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D   + GR+ DA  +  +M   G   N   YS +I G+ KS  +  A  V+E
Sbjct: 223 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWE 282

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + + PN+V YS +I GL   G M EA   F   +D+   P+++TY  +I+GY K G
Sbjct: 283 AMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIG 342

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + A+ +++ M+  G MP+ +  S L
Sbjct: 343 DTSRALSVWEEMIGAGCMPNAVSYSIL 369



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 9/214 (4%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA+ +  ++   G+ P ++TY  ++ G     R+ +A ++ E++    L  N   ++ +I
Sbjct: 206 AAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVI 265

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FCK G +D A  ++  M+    + NVV YS +I G      M  A  ++ EM ++  +
Sbjct: 266 TGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCA 325

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PNI++Y  +I G  K G    AL  +   +    +P+ V+Y+ILI G C  GR  +AM +
Sbjct: 326 PNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMV 385

Query: 190 YDSMLRNGIMPD---------GLLLSTLADYNLQ 214
           +  ML  G  PD         GL +S + D  L+
Sbjct: 386 WKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLR 419



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK++  +    + P+++ Y+ +I G  +  ++ EA  LF ++   +  PN I
Sbjct: 270 KSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNII 329

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I  + K G    A  ++ +M+  G   N V+YS LI+G      +K A  V++ M
Sbjct: 330 TYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHM 389

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGR 182
            +   +P+ ++Y+ +I GLC  G+++  L  F+  L   H  PDV++Y +L+ G   A  
Sbjct: 390 LDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKD 449

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              AM L + ML  G  PD
Sbjct: 450 LPRAMDLLNRMLDQGCDPD 468



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 1/170 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++ D    P+IITY ++I GY  +     A+ ++E++      PN+++++ILI+  C
Sbjct: 315 LFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLC 374

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-YEEMCENNISPNI 132
             GR+ DA M++  ML++G   + + Y+ +I G   S  +     + Y+ +   +  P++
Sbjct: 375 NVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDV 434

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +SY++L+DGL     +  A+   +  LD    PD VT  I +R +    R
Sbjct: 435 ISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGER 484



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 9/194 (4%)

Query: 23  LEPDIITYNTIICGYCS-------LNRLDEAVQ-LFEKLTCVQLKPNSITFTILIDAFCK 74
           L P ++++N ++   CS          LD A++ L E +    L P+  T++ ++ A   
Sbjct: 72  LAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALAD 131

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            GR+DDA  +  +M+  G  A    ++ ++    ++ ++K A  ++E M      P   +
Sbjct: 132 AGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAAT 190

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y++L+ GL   G    A+          ++P V+TY  ++ G  + GR  +A ++ + M 
Sbjct: 191 YNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEME 250

Query: 195 RNGIMPDGLLLSTL 208
           RNG+  +  + ST+
Sbjct: 251 RNGLARNEFVYSTV 264


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 1/213 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A+ +F ++   G  P++ITYNT+I GYC    L+ A++L E +    LKP++ T+T 
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F + G+++ AT +F  M+E G   N VTY+ +IDGYF    +  A  ++ +M E+ 
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +Y+++I G  K   + EA       +   LLP+V+TY   I G C+ GR   A 
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +++  M +    P+    S+L  Y L   G  E
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLI-YGLCQEGRAE 639



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 2/196 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF  + + G+ P+ +TY  II GY +L ++D+A+ LF K+      P+S T+ +
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  F K   + +A     KM+++G   NV+TY+  IDG  ++     AF ++ EM + N
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA-LYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTE 185
             PN+ +YS LI GLC+ G  E+A +Y     L ++   P+V TY  L++G C  GR  E
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 186 AMQLYDSMLRNGIMPD 201
           A QL  SM + G+ P 
Sbjct: 678 ADQLVVSMQKKGLQPS 693



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 1/192 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L+ A++L   +   GL+PD  TY  +I G+    +L+ A  LF  +    + PN +
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID +    ++DDA  +F KM+E G   +  TY+ +I G+ K+ ++  A +   +M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN+++Y+  IDGLC+ G    A   FH     +  P++ TY+ LI G C+ GR 
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 184 TEAMQLYDSMLR 195
            +A ++Y+ + R
Sbjct: 639 EDA-EMYNLLAR 649



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 110/202 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  +F ++   G +P+ +TY+T+I G CS  RL+EA+ + E++    ++P   T+T
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I + + C  G   +A  +  KM ++G   N+ T++ LI G  +    + A  +Y +M  +
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P  V+Y+ LI+ LC  G  E A   F   L +  LP   TY  +I+ +C  G   +A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           M ++D ML+ G  P+ +  +TL
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTL 453



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 107/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L G++  RG  P+I T+  +I G     + + A+ L+ K+    L P ++T+  LI+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C EGR + A  +F  ML  G   +  TY+ +I  +    +++ A  ++++M +   SP
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ LI G CK+G +  A+        N L PD  TY  LI G+ + G+   A  L+
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+ +GI P+ +  + + D
Sbjct: 506 YGMMEHGISPNHVTYTAIID 525



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++   + A+ L+ ++   GL P  +TYN +I   C   R + A  +F+ +      P+
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+  +I  FC  G +  A ++F KML+ G   NV+TY+ LI GY K  N+ +A  + E
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE 471

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N + P+  +Y+ LI G  + G +E A   F+  +++ + P+ VTY  +I GY    
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  +A+ L+  M+ +G +P          YN+  SG
Sbjct: 532 KVDDALALFWKMVESGNLPSS------QTYNVMISG 561



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 108/206 (52%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E   + A  +F  +   G  P   TYN II  +C +  + +A+ +F+K+      PN IT
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  +CK+G +++A  +   M   G K +  TY+ LI G+ +   ++ A  ++  M 
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ ISPN V+Y+ +IDG      +++AL  F   +++  LP   TY ++I G+ K    +
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA      M++ G++P+ +  ++  D
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFID 595



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 96/177 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+  TY ++I G+C  + LD A  +F+++      PNS+T++ LI+  C EGR+++A  M
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M++KG +  V TY+  +     +     A ++  +M +    PNI +++ LI GL +
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G  E A+  +H  L + L+P  VTY  LI   C  GR   A  ++  ML +G +P 
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 1   MLIKECHLDAALKLFGQ-LTDRGLEPD----IITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           ++IK C  +  +K   Q L++   + D    + ++ T++      + +D A  ++ K+  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
             ++P+ +TF  +I+  CK+GR+ +A ++ S +       N  TY+ LI G+ ++ N+  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           AF +++ M ++   PN V+YS LI+GLC  G +EEA+      +   + P V TY I + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD 201
             C AG  +EA++L   M + G +P+
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPN 341



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 2/185 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA--VQLFEKLTCVQLKPNSITFTIL 68
           A K+F ++  R   P++ TY+++I G C   R ++A    L  +LT    +PN  T+T L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C EGR  +A  +   M +KG + +   Y  L+ G  K+  ++SA +++  M     
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++  Y  LI  LCK   +EEA   F   L+ H   D V + +L+ G  K G     ++
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLK 785

Query: 189 LYDSM 193
           L   M
Sbjct: 786 LLHVM 790



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 79/162 (48%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  +LT  G EP++ TY T++ G C   R  EA QL   +    L+P+   +  L+   C
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  +++ A  +F  M   G + ++  Y  LI    K   ++ A  +++ M E + + + V
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           ++++L+DGL K G  +  L   H     +   +  TY +L R
Sbjct: 766 AWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+Y +M  + I P++++++ +I+ LCK+G ++EA             P+  TY  LI 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+C+      A  ++D M+++G  P+ +  STL +
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLIN 280



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +  +GL+P    Y  ++ G C   +++ A+ +F  +  +  + +   +  LI 
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CKE  +++A  +F  MLEK   ++ V ++ L+DG  K         +   M   N + 
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTL 797

Query: 131 NIVSYSIL 138
           N  +Y +L
Sbjct: 798 NFQTYVML 805



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +LI EC    +++AL +F  +   G +  +  Y  +IC  C  N ++EA  +F+ +    
Sbjct: 700 LLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH 759

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
              + + +T+L+D   KEG  D    +   M  +    N  TY  L
Sbjct: 760 WNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNS 62
            +  AL+L  ++ + G  PD +T+N I+ G C  N +    ++  +L     C+   PN 
Sbjct: 269 QVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCM---PNV 325

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT +I  +CK G+++DA  +++ M+  G   N VTY+ LI+GY K  ++ SA +VY++
Sbjct: 326 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 385

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      P++V++S LIDG C+ G +++AL  +     + + P+V T++I+I   CK  R
Sbjct: 386 MTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNR 445

Query: 183 PTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
             EA+ L + + LR  I P   + + + D
Sbjct: 446 SDEAICLLNELNLRPDIAPQAFIYNPVID 474



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQ-LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI    +   + LF + + DR   PD+ ++N +I G C + ++ +A++L E++      P
Sbjct: 228 LIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSP 287

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDV 119
           +++T  I++D  C+   +     +  ++   G    NVVT++ +I GY K+  ++ A  V
Sbjct: 288 DTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 347

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y +M  + I PN V+Y++LI+G  K G +  A+  +         PDVVT++ LI GYC+
Sbjct: 348 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 407

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+  +A++++  M ++ I P+    S +
Sbjct: 408 CGQLDDALRIWSDMAQHRIQPNVYTFSII 436



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 1/204 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+ ++  +   G+ P+ +TYN +I GY  +  L  AV++++++T ++  P+ +
Sbjct: 337 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 396

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA  ++S M +   + NV T+S +I    K      A  +  E+
Sbjct: 397 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNEL 456

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P    Y+ +ID LCK G ++EA        +    PD  TY ILI GYC   R
Sbjct: 457 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 516

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLS 206
            +EA+  +  M+  G  PD + ++
Sbjct: 517 ISEAIMFFHEMVEAGCSPDSITVN 540



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 109/205 (53%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFT 66
           LDA+  L  + ++ G   +   YN ++       R+ + V LFE+    ++  P+  +F 
Sbjct: 199 LDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFN 258

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   C+ G++  A  +  +M E G   + VT++ ++DG  ++  +    +V   +  +
Sbjct: 259 VVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRD 318

Query: 127 NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN+V+++ +I G CK G +E+A+  ++  + + ++P+ VTY +LI GY K G    
Sbjct: 319 GVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGS 378

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++Y  M R    PD +  S+L D
Sbjct: 379 AVEVYQQMTRLRCPPDVVTFSSLID 403



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 1/179 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A++++ Q+T     PD++T++++I GYC   +LD+A++++  +   +++PN  TF+I
Sbjct: 376 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 435

Query: 68  LIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +I + CK+ R D+A  + +++ L          Y+ +ID   K   +  A  + + M E 
Sbjct: 436 IIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 495

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              P+  +Y+ILI G C +  + EA+  FH  ++    PD +T    I    KAG P E
Sbjct: 496 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 554



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITF 65
            LD AL+++  +    ++P++ T++ II   C  NR DEA+ L  +L     + P +  +
Sbjct: 410 QLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIY 469

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +ID  CK G++D+A ++   M EKG + +  TY+ LI GY     +  A   + EM E
Sbjct: 470 NPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 529

Query: 126 NNISPNIVSYSILIDGLCKRGLMEE 150
              SP+ ++ +  I  L K G+  E
Sbjct: 530 AGCSPDSITVNCFISCLLKAGMPNE 554



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 75/239 (31%)

Query: 45  EAVQLFEKLTC--VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVT 99
            A+ +F  L C  + + P++ +   +I   C+ GR  DA  +F +M       P A  ++
Sbjct: 128 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLS 187

Query: 100 ------------------------YSCLIDGYFKSQNMKS---------AFDVYEEMCEN 126
                                   + C ++ Y  ++ M S            ++E   ++
Sbjct: 188 FLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 247

Query: 127 NI-SPNIVSYSILIDGLCKRGLMEEALY------AFHCALD--------------NHL-- 163
            + SP++ S++++I G+C+ G +++AL        F C+ D              N +  
Sbjct: 248 RVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSR 307

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                         +P+VVT+  +I GYCKAG+  +AM +Y+ M+ +GIMP+ +  + L
Sbjct: 308 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 366


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+ +RG  PD+ITY T+I G+C    +DEAV L + +T    KPN+I++TI
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C   R  DA  + S+M+++G   N +T++ LI+   K   ++ A ++ ++M  N 
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  +EAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           Q++D++    I  D +L + +   +L   G  E  I
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVIS-SLCKRGETERAI 597



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 126/241 (52%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--------------------- 42
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R                     
Sbjct: 309 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368

Query: 43  --------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                         +D  ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N ++Y+ ++ G   ++    A D+  +M +     N ++++ LI+ LCK+GL+
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  G+ P+ ++ S++
Sbjct: 489 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548

Query: 209 A 209
           A
Sbjct: 549 A 549



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 100/201 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL L   L   G EPD+++YN ++ G C   R     +L E++  +   PN +TF  
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+ G  +    + ++M+E G   ++  Y+ +IDG  K  +++ A ++   M    
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V Y+ L+ GLC     EE         D     D VT+ IL+  +C+ G     +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + ML  G MPD +  +T+
Sbjct: 388 ELLEQMLERGCMPDVITYTTV 408



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 97/189 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  ++      P+I+T+NT+I   C     +   ++  ++      P+   +  +ID  
Sbjct: 248 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 307

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CKEG ++ A  + ++M   G K NVV Y+ L+ G   ++  +   ++  EM + +   + 
Sbjct: 308 CKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+++IL+D  C+ GL++  +      L+   +PDV+TY  +I G+CK G   EA+ L  S
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427

Query: 193 MLRNGIMPD 201
           M   G  P+
Sbjct: 428 MTACGCKPN 436



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 95/207 (45%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A+++   L  RG   D+   N ++   C    +DEA+ L   L     +P+ +++  ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 234

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C   R      +  +M+      N+VT++ LI    ++   +   +V  +M E+  +
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 294

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+I  Y+ +IDG+CK G +E A    +      L P+VV Y  L++G C A R  E  +L
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSS 216
              M       D +  + L D+  Q+ 
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNG 381



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 94/198 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++  RG  P    Y+ I+   C       AV++ E L       +     ++++
Sbjct: 141 ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLN 200

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C +G +D+A  +   +   G + +VV+Y+ ++ G   ++      ++ EEM      P
Sbjct: 201 AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 260

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E         +++   PD+  YA +I G CK G    A ++ 
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +TL
Sbjct: 321 NRMPSYGLKPNVVCYNTL 338



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 79/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + DEA++L   +    + PN
Sbjct: 482 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K    + A +   
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  +   PN  +Y+ILI GL   G ++EA
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEA 631



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 3/182 (1%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YN ++ GYC   +L+ A +L      V + PN+ T+  ++ A C  GR+ DA  +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +G       Y  +++   +    +SA  V E++     + ++ + +++++ +C +G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EAL+           PDVV+Y  +++G C A R     +L + M+R    P+ +  +TL 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 210 DY 211
            Y
Sbjct: 270 SY 271



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 62/123 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL+L   + ++G+ P+ I Y++I        R+++ +Q+F+ +    ++ +
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  +I + CK G  + A    + M+  G   N  TY+ LI G      +K A ++  
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636

Query: 122 EMC 124
           E+C
Sbjct: 637 ELC 639



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++  +++F  + D  +  D + YN +I   C     + A++    +      PN
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI     EG + +A  M +++  KG
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            S+  + LI + C  GR  +A    S        A VV Y+ ++ GY ++  ++SA  + 
Sbjct: 57  GSVRLSSLIRSLCAAGRTAEAARALSAAGGG---AGVVAYNAMVAGYCRAGQLESARRLA 113

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             +    + PN  +Y  ++  LC RG + +AL            P    Y +++   C+ 
Sbjct: 114 AAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRG 170

Query: 181 GRPTEAMQLYDSMLRNG 197
           G    A+++ + +   G
Sbjct: 171 GGFRSAVRVLEDLHARG 187


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L+ AL     +T+ GL PD+ITYNT+I  YC    + +A  L +++    LK +
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T   L+   CKE R ++A  +     ++G   + V+Y  ++  YFK    + A  +++
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++P+I +Y+ LI GLC  G + EA+   +  +   L+PD  TY I+I  YCK G
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A Q ++ ML N   PD +  +TL
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTL 602



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 2/207 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  L  ++   G+ P   TYNT++  Y  L  + +A  + E +T    +P+  T+ +
Sbjct: 261 LGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNV 320

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           L    C+ G++D+A  +  +M        +VVTY+ L+D  FK Q    A ++ EEM + 
Sbjct: 321 LAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDK 380

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  ++V+++I++ GLC+ G +EEAL       +  L PDV+TY  LI  YCKA    +A
Sbjct: 381 GVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKA 440

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNL 213
             L D M+R+G+  D   L+TL  YNL
Sbjct: 441 FVLMDEMVRSGLKMDTFTLNTLL-YNL 466



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 6/218 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            KE   + AL L+ +++ R L P I TYNT+I G C++ +L EA+    +L    L P+ 
Sbjct: 502 FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ I+I A+CKEG ++ A    +KMLE   K +VVT + L++G      ++ A  ++E 
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E     ++++Y+ LI  LCK G ++ AL+ F       L PD  TY +++    +AGR
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             EA  +   +  +G       LS    Y L  S ++E
Sbjct: 682 SEEAQNMLHKLDESGK------LSERFSYPLIKSSAEE 713



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 4/213 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A +L      RG  PD ++Y T++  Y   N+ + A+ L+++++  +L P+
Sbjct: 466 LCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C  G++ +A    +++++KG   +  TY+ +I  Y K  +++ AF  + 
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M EN   P++V+ + L++GLC  G +E+A+  F    +     DV+TY  LI+  CK G
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645

Query: 182 RPTEAMQLYDSMLRNGIMPDG----LLLSTLAD 210
               A+  +  M   G+ PD     ++LS L++
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A KL  ++    +  PD++TYNT++       R  +A+ L E++    +K + +T  
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++   C+EG++++A      M E+G   +V+TY+ LID Y K++N+  AF + +EM  +
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  +  + + L+  LCK    EEA            +PD V+Y  ++  Y K  +P  A
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L+D M +  + P     +TL
Sbjct: 511 LYLWDEMSKRKLTPSIYTYNTL 532



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A+L +F  L    L P+  T+N ++  +CS   L +A+     +    L P+ +T+  L+
Sbjct: 193 ASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLL 252

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A C++G + +A  + ++M ++G      TY+ L+  Y +   +K A +V E M      
Sbjct: 253 KAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFE 312

Query: 130 PNIVSYSILIDGLCKRGLMEEALY----AFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           P++ +Y++L  GLC+ G ++EA        H ++   + PDVVTY  L+    K  R ++
Sbjct: 313 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI---VSPDVVTYNTLVDACFKYQRSSD 369

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A+ L + M   G+       S+L  +N+   G
Sbjct: 370 ALNLLEEMRDKGVK------SSLVTHNIVVKG 395



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           S + +++ DV+  +    + PN  ++++L+   C +G + +AL          L PDVVT
Sbjct: 188 STSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVT 247

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           Y  L++ +C+ G   EA  L   M + GI P      T A YN
Sbjct: 248 YNTLLKAHCRKGMLGEARTLLARMKKEGIAP------TRATYN 284



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 36/150 (24%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----------LNRLDEAVQLFE 51
           L K+  +D AL  F  +  RGL+PD  TYN ++               L++LDE+ +L E
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE 700

Query: 52  KLTCVQLKPNS--------------------------ITFTILIDAFCKEGRMDDATMMF 85
           + +   +K ++                           ++   +   C  G++ +A  + 
Sbjct: 701 RFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVL 760

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
            +M++KG   +  TY  L++G  K Q  ++
Sbjct: 761 DEMMQKGMSVDSSTYITLMEGLIKRQKRQT 790


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 113/193 (58%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+++   +   G +PD  +Y  +I G+C +++++ A  +F ++    L PN +T+T L
Sbjct: 487 DVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTAL 546

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  +CK+ ++D A  M  +M   G + NV TY+ LI G  K  N   A ++ + M E  I
Sbjct: 547 ISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP++V+YS +I+GLC  G +  AL  F+  + +  LP++ TY+ LI+   + GR  EA +
Sbjct: 607 SPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE 666

Query: 189 LYDSMLRNGIMPD 201
           ++  + + G++PD
Sbjct: 667 MFSELKKQGLIPD 679



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A ++F ++ + G EP+  TY+T+I G C+  R++EA+    ++T   + P   TFT 
Sbjct: 279 LDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I A C  GR++DA  +F  M +KG K NV TY+ LI G   S   + A  ++  M  + 
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDG 395

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V+Y+ L++ L +   ++ AL  F+    +  LP+  +Y  LIRGYC  G   +AM
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +  +ML+    P      TL  YN+   G
Sbjct: 456 SMLTNMLKGRPTP------TLVTYNIIIKG 479



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 103/177 (58%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P ++TYN II GYC     D A+++ E +     +P+  ++T LI  FCK  +M+ A+ M
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGM 527

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F++M+++G   N VTY+ LI GY K + +  A  + E M  +   PN+ +Y++LI GL K
Sbjct: 528 FNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK 587

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +     A       L+  + PDVVTY+ +I G C  G    A+++++ M+++G +P+
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPN 644



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 4/204 (1%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           +IK C     +  AL      + RG +  + TY T++     LN     +  + ++    
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L+PN + +  +I+A CK+G + DA  + +K+ + G K +  TY+ +I GY +++++ SAF
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           +++  M E    PN  +YS LI+GLC  G + EAL        + +LP V T+   I   
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           C  GR  +A +++  M + G  P+
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPN 367



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 6/220 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A  +F ++ DRGL P+ +TY  +I GYC   +LD A ++ E++     +PN  
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI    K+     A  +   MLE+    +VVTYS +I+G   +  +  A +++ +M
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++   PN+ +YS LI  L + G +EEA   F       L+PD VTY  +I     +G+ 
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A      M+  G  P      TL  Y++   G Q   +
Sbjct: 697 DRAFDFLGEMINAGCQP------TLQTYDVLIKGLQNEMV 730



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 5/216 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF +++  G+ P+ +TYN ++        +D A+ +F  +      PN+ ++  LI 
Sbjct: 384 AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIR 443

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G  + A  M + ML+  P   +VTY+ +I GY  S +   A  V E M  N   P
Sbjct: 444 GYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQP 503

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  SY+ LI G CK   ME A   F+  +D  L P+ VTY  LI GYCK  +   A ++ 
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563

Query: 191 DSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
           + M R+G  P+     +L+  L   N   SG++E C
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQN-NFSGAEELC 598



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 32/227 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +   A +L   + +  + PD++TY+T+I G C+   +  A+++F K+      PN
Sbjct: 585 LTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPN 644

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LI A  +EGR+++A  MFS++ ++G   + VTY  +I+    S  +  AFD   
Sbjct: 645 LHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLG 704

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH----------LLPDVVT-- 169
           EM      P + +Y +LI     +GL  E +Y    AL N           +  DV++  
Sbjct: 705 EMINAGCQPTLQTYDVLI-----KGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVL 759

Query: 170 ---------------YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                          Y  L+    ++GR  EA  LY SM+     P+
Sbjct: 760 SSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           MFS   ++GPK  + TY+ L+    K     +  D Y ++    + PN++ Y+ +I+ LC
Sbjct: 183 MFS---QRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALC 239

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G + +A    +    + + PD  TY  +I GYC+      A ++++ M   G  P+  
Sbjct: 240 KDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAA 299

Query: 204 LLSTL 208
             STL
Sbjct: 300 TYSTL 304



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 22/229 (9%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICG------YCSLNRLDEAVQ------------- 48
           +D A    G++ + G +P + TY+ +I G      Y  L  L  A               
Sbjct: 696 VDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDV 755

Query: 49  ---LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
              L  KL  +  + +   +  L+    + GR  +A  ++  M+ +    N  TY   + 
Sbjct: 756 ISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLI 815

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
              ++  +  A DV++ M +     ++  Y  LI  LC+    +EA + F   L   L  
Sbjct: 816 SLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNA 875

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           D + + ILI G   AG     M+    M  N   P     + LA   L+
Sbjct: 876 DEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAREALK 924



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +D A+ +F  ++D+  E  +  Y  +IC  C L+R  EA  +FEK+    L  +
Sbjct: 817 LLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNAD 876

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE---KGPKANVVT 99
            I +TILI+     G   D  M F  ++E   + P ++  T
Sbjct: 877 EIVWTILINGLLGAG-YKDLCMEFLHIMETNRRNPSSHART 916


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF +   +GL+P I+ YNT+I G      + +A+QL   ++   + P+  T+ +
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK G + DA  + +  + KG   ++ T++ LIDGY K   M +A  + + M  + 
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG 463

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++P++++Y+ +++GLCK    E+ +  F   ++   LP+++TY ILI   CKA + TEA+
Sbjct: 464 VTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEAL 523

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L + +   G++PD +   T+
Sbjct: 524 DLLEEIRNRGLIPDPVSFGTV 544



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 107/185 (57%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ ++GLEPD  TYNTII GY  + ++ +A ++ +        P+  T+  LI   C++G
Sbjct: 283 KMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDG 342

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            +D A  +F + L KG K ++V Y+ LI G  +   +  A  +  +M +  +SP+I +Y+
Sbjct: 343 DIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYN 402

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ++I+GLCK G + +A    + A+    LPD+ T+  LI GYCK  +   A+ + DSM  +
Sbjct: 403 LVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSH 462

Query: 197 GIMPD 201
           G+ PD
Sbjct: 463 GVTPD 467



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 97/183 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   ++  G+ PDI TYN +I G C +  + +A  L          P+  TF  LID
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK  +MD+A  +   M   G   +V+TY+ +++G  K+   +   + ++ + E    P
Sbjct: 442 GYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLP 501

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ILI+ LCK   + EAL       +  L+PD V++  +I G+C  G   EA QL+
Sbjct: 502 NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLF 561

Query: 191 DSM 193
             M
Sbjct: 562 RRM 564



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 7/217 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD-------EAVQLFEKL 53
           +L K+ HL    KL  ++   G+ P++ T+N  I G C    L+       EA     K+
Sbjct: 225 ILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKM 284

Query: 54  TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
               L+P+  T+  +I  + K G++ DA+ +      KG   +  TY  LI G  +  ++
Sbjct: 285 VNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI 344

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             A  ++EE     + P+IV Y+ LI GL ++GL+ +AL   +      + PD+ TY ++
Sbjct: 345 DHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLV 404

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I G CK G  ++A  L ++ +  G +PD    +TL D
Sbjct: 405 INGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 108/210 (51%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    +  ++ F  + ++G  P+IITYN +I   C   ++ EA+ L E++    L P+
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV-TYSCLIDGYFKSQNMKSAFDVY 120
            ++F  +I  FC  G +D+A  +F +M ++    + V TY+ +I+ + +  +M  A  ++
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +    P+  +Y ++IDG CK G +          ++   +P + T+  +I   C  
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQ 657

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  EA+ +   M+R G++P+ ++    AD
Sbjct: 658 HRVHEAVGIVHLMVRTGVVPEAVVTIFDAD 687



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 7/212 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+ +F ++     EP I +YN I+         ++A +++ ++    + P+  
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVC 147

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFTI I +FC+  R   A  + + M  +G + N V Y  +I G+++      A++++ +M
Sbjct: 148 TFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKM 207

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG-- 181
               I P+I +++ L+  LCK+G ++E     +  L N + P++ T+ I I+G C+ G  
Sbjct: 208 LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267

Query: 182 -----RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                +  EA      M+  G+ PD    +T+
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTI 299



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 7/201 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ +   +   G+ PD+ITYN+I+ G C   + ++ ++ F+ +      PN I
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI++ CK  ++ +A  +  ++  +G   + V++  +I G+  + ++  A+ ++  M
Sbjct: 505 TYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM 564

Query: 124 CEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            +   I   + +Y+I+I+   ++  M+ A   FH   D    PD  TY ++I G+CK G 
Sbjct: 565 EQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGN 624

Query: 183 PTEAMQLYDSMLRN---GIMP 200
                  YD +L+    G +P
Sbjct: 625 VNSG---YDFLLKEIEIGFVP 642



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 106/208 (50%), Gaps = 7/208 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++  + + A K++ ++   G+ PD+ T+   I  +C   R   A++L   +     + 
Sbjct: 120 ILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL 179

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++ +  +I  F +E    +A  +F+KML  G   ++ T++ L+    K  +++    + 
Sbjct: 180 NAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLL 239

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLME-------EALYAFHCALDNHLLPDVVTYAIL 173
            ++ +N + PN+ +++I I GLC++G++E       EA    H  ++  L PD  TY  +
Sbjct: 240 NKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTI 299

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           I GY K G+  +A ++       G +PD
Sbjct: 300 IYGYSKVGKIQDASRILKDAKFKGFVPD 327



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            Y   +  Y +   ++ A DV+E M   N  P+I SY+ +++ L + G   +A   +   
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
               + PDV T+ I I+ +C+  RP  A++L ++M   G
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQG 176


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL L GQ+   G++PD+++Y TII GYC    + +A +   +L    LKPN++ +  
Sbjct: 563 MEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNA 622

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  + + G +  A  +   M   G +   VTY  L+     +  +  A  ++E+  +N+
Sbjct: 623 LIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNS 682

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I   +V Y+I+I GLCK G M+EA+  F       + P+ +TY  L+  YCK+G   EA 
Sbjct: 683 IEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEAS 742

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+D M+ +GI+PD +  +TL
Sbjct: 743 KLFDEMVSSGIVPDNVSYNTL 763



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 1/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ ALKL   +  +G +PD   +N+II  YC L +++EA+ L  ++    ++P+ +
Sbjct: 524 KDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVV 583

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  +ID +CK   +  A    ++++  G K N V Y+ LI GY ++ N+  A  V + M
Sbjct: 584 SYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM 643

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P  V+Y  L+  +C  GL++EA   F  +  N +   VV Y I+I+G CK G+ 
Sbjct: 644 ESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKM 703

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
            EAM  ++ M    I P+ +  +TL  Y    SG+ E 
Sbjct: 704 DEAMNYFEEMRSRSIPPNKITYTTLM-YAYCKSGNNEE 740



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLKP 60
           L KE  ++ A ++  ++   G+      +N+++ G      RL+  V+L  ++    +KP
Sbjct: 381 LCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKP 440

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N    T      C+  R  +A  ++ KMLEKG   N+ T + LI G  + +NMK A +V 
Sbjct: 441 NDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVL 500

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    +  + ++Y+I+I G CK   +EEAL      +     PD   +  +I  YC  
Sbjct: 501 RTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDL 560

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+  EA+ L   M   G+ PD +   T+ D
Sbjct: 561 GKMEEALHLLGQMKIEGVQPDVVSYGTIID 590



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)

Query: 2   LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL--TCVQL 58
           L +  +L A  K+F ++ D + + P+  +Y ++I   C + ++D+  ++   L    +Q 
Sbjct: 203 LARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQ 262

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
              ++ + +L+DA CK GR+D+A  +  +M E     ++VT+  LI+G  +S        
Sbjct: 263 SAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGA 322

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +  EM    I+PN V  + LID  C++G   EA+  F   +   +    VTY ++ R  C
Sbjct: 323 LLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALC 382

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           K G    A ++ + ML  G+     L +++    LQ +G  E  +
Sbjct: 383 KEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVV 427



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 89/167 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL+P+ + YN +I GY     +  A+ + + +  + ++P ++T+  L+   C  G +D+A
Sbjct: 612 GLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEA 671

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             MF +  +   +  VV Y+ +I G  K   M  A + +EEM   +I PN ++Y+ L+  
Sbjct: 672 KTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYA 731

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            CK G  EEA   F   + + ++PD V+Y  L+ G+ +     +A++
Sbjct: 732 YCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 100/208 (48%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   L++ ++L  ++  RG++P+           C   R  EAV ++ K+    L  
Sbjct: 416 LLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T   LI   C+   M  AT +   M+ KG + + +TY+ +I G  K   ++ A  + 
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M      P+   ++ +I   C  G MEEAL+         + PDVV+Y  +I GYCKA
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKA 595

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +A +  + ++  G+ P+ ++ + L
Sbjct: 596 KDIQKANEYLNELMACGLKPNAVIYNAL 623



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 103/201 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ ++ ++ ++GL  +I T N +I G C    +  A ++   +    ++ ++IT+ I+I 
Sbjct: 461 AVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQ 520

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+ ++++A  +   M+ KG K +   ++ +I  Y     M+ A  +  +M    + P
Sbjct: 521 GCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQP 580

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++VSY  +IDG CK   +++A    +  +   L P+ V Y  LI GY + G  + A+ + 
Sbjct: 581 DVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVL 640

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
           D+M   GI P  +   +L  +
Sbjct: 641 DTMESIGIQPTNVTYCSLMHW 661



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 81/149 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +  ++  A+ +   +   G++P  +TY +++   C    +DEA  +FE+     ++   +
Sbjct: 629 RNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVV 688

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +TI+I   CK G+MD+A   F +M  +    N +TY+ L+  Y KS N + A  +++EM
Sbjct: 689 GYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEM 748

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEAL 152
             + I P+ VSY+ L+ G  +   +++A+
Sbjct: 749 VSSGIVPDNVSYNTLVTGFSQVDSLDKAI 777



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 3/121 (2%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +D A  +F Q     +E  ++ Y  +I G C + ++DEA+  FE++    + PN 
Sbjct: 663 CHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNK 722

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+T L+ A+CK G  ++A+ +F +M+  G   + V+Y+ L+ G+ +  ++  A +   E
Sbjct: 723 ITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAE 782

Query: 123 M 123
           +
Sbjct: 783 I 783



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 44/80 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F ++  R + P+ ITY T++  YC     +EA +LF+++    + P+
Sbjct: 697 LCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPD 756

Query: 62  SITFTILIDAFCKEGRMDDA 81
           ++++  L+  F +   +D A
Sbjct: 757 NVSYNTLVTGFSQVDSLDKA 776


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 105/174 (60%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           +N +I G C    LDEA ++F+++    + P+  +++ILID FC++GR+D A+ +F +M 
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
             G   N+ +YS LIDG+ K   +  A +V+EEM  + I P++ SYSILIDG C++G M+
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            A+  +     N+  P    Y  LI+GY K+ +   A++ +  M + G+ PD +
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTI 456



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 4/201 (1%)

Query: 6   CHLD--AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP-NS 62
           C +D   A ++ G++   G  P+++TY T I G C +     A +L + L C + +P N+
Sbjct: 222 CSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNL-CRKNQPLNN 280

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             F  +I   C+ G +D+A+ +F +M   G   +V +YS LIDG+ +   +  A +V++E
Sbjct: 281 HCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKE 340

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  + I PNI SYSILIDG CK G +++AL  F    ++ +LPDV +Y+ILI G+C+ G 
Sbjct: 341 MRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGD 400

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
              A++ ++ M  N   P   
Sbjct: 401 MDSAIKFWEEMTSNNFSPSAF 421



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 35/236 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A ++F ++ + G+ PD+ +Y+ +I G+C   R+D+A ++F+++    + PN  +++I
Sbjct: 296 LDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSI 355

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID FCKEGR+D A  +F +M   G   +V +YS LIDG+ +  +M SA   +EEM  NN
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV------------------- 168
            SP+  +Y  LI G  K      AL  F       + PD +                   
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 169 ----------------TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                           +Y   I   C+   P +A+QL   ML+  ++PD +  STL
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 114/214 (53%), Gaps = 6/214 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNRLDEAVQLFEKLTCV 56
           L+++  +D    LF  L   G  P+I TY  ++  +C     S++ +  A ++  K+   
Sbjct: 181 LVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVD-IRRASEILGKIYMS 239

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
              PN +T+   I   CK G    A  +   +  K    N   ++ +I G  +   +  A
Sbjct: 240 GETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEA 299

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +V++EM  + I P++ SYSILIDG C++G +++A   F    ++ +LP++ +Y+ILI G
Sbjct: 300 SEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDG 359

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +CK GR  +A+++++ M  +GI+PD    S L D
Sbjct: 360 FCKEGRVDKALEVFEEMKNSGILPDVYSYSILID 393



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 1/196 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + + A+ LF ++T  G+  ++ TY  +I  + S  ++D A +LF+ +   ++ P+ I
Sbjct: 537 KRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQI 596

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L+  FC  G M  A  +F +M  +G   NVVTY+C I+ Y K      A  +YE+M
Sbjct: 597 AYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKM 656

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGR 182
            E  + P+ + Y++LI   C  G M  A   F     +    P+VV Y  LI  Y K  +
Sbjct: 657 KERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNK 716

Query: 183 PTEAMQLYDSMLRNGI 198
             +A +LY+ M   G+
Sbjct: 717 RDQAEKLYEEMRAKGL 732



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 35/230 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D A ++F ++ + G+ P+I +Y+ +I G+C   R+D+A+++FE++    + P+  
Sbjct: 327 RKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVY 386

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY--- 120
           +++ILID FC++G MD A   + +M       +   Y  LI GY+KS+   +A   +   
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 121 --------------------------------EEMCENNISPNIVSYSILIDGLCKRGLM 148
                                           E+  EN +  N  SY+  I  +C+  + 
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           E+AL      L  ++LPDVV Y+ LI  + K     +A+ L+  M + GI
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 99/201 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + AL L  +  + G+  +  +YN  I   C  +  ++A+QL   +    + P+ + ++ 
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  F K    + A M+F KM + G   NV TY+ LI+ +     M  A+ +++ M E+ 
Sbjct: 531 LISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ ++Y+ L+ G C  G M  A   F         P+VVTY   I  Y K  +  +A 
Sbjct: 591 VYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAH 650

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +LY+ M   G+ PD +L + L
Sbjct: 651 KLYEKMKERGVYPDQILYTML 671



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 92/198 (46%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      ALK F  +   G+ PD I  N I+  YC     ++A+ L EK     +  N  
Sbjct: 432 KSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY 491

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++   I   C+    + A  +   ML++    +VV YS LI  + K  N + A  ++ +M
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I+ N+ +Y+ILI+       M+ A   F    ++ + PD + Y  L+ G+C  G  
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 611

Query: 184 TEAMQLYDSMLRNGIMPD 201
           T A  L+D M R G  P+
Sbjct: 612 TRARALFDEMSREGCSPN 629



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 1/124 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A  LF +++  G  P+++TY   I  Y  LN+ ++A +L+EK+    + P+ I +T
Sbjct: 610 EMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYT 669

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +LI AFC  G M+ A  +F +M ++G    NVV Y+CLI+ Y K      A  +YEEM  
Sbjct: 670 MLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRA 729

Query: 126 NNIS 129
             +S
Sbjct: 730 KGLS 733



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 82/152 (53%), Gaps = 1/152 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + I +C +D A +LF  + +  + PD I Y +++ G+C+   +  A  LF++++     P
Sbjct: 569 LFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSP 628

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T  I+ + K  + + A  ++ KM E+G   + + Y+ LI  +  +  M  A  ++
Sbjct: 629 NVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688

Query: 121 EEM-CENNISPNIVSYSILIDGLCKRGLMEEA 151
           +EM  E   +PN+V Y+ LI+   K    ++A
Sbjct: 689 DEMKQEGRCTPNVVMYTCLINSYIKLNKRDQA 720



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 119/246 (48%), Gaps = 42/246 (17%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE + DA  +L   L D  +E   + ++ +I  + S + L+ A  +F +     ++ N +
Sbjct: 116 KEENRDAG-ELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIM 172

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK----SQNMKSAFDV 119
           +   L+    ++ R+D   ++F  +++ GP+ N+ TY+ +++ + +    S +++ A ++
Sbjct: 173 SCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEI 232

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGL-------------------------------- 147
             ++  +  +PN+V+Y   I GLCK GL                                
Sbjct: 233 LGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQ 292

Query: 148 ---MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              ++EA   F    ++ +LPDV +Y+ILI G+C+ GR  +A +++  M  +GI+P+   
Sbjct: 293 GGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYS 352

Query: 205 LSTLAD 210
            S L D
Sbjct: 353 YSILID 358


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 112/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L  ++  +GL+P ++TY +++ G   ++RLDEA  LFE+   + +  N +
Sbjct: 634 KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   N  T++CL+D   K++ +  A   ++ M
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                SPN ++YSI+I+GLC      +A   +       L P+ +TY  +I G  KAG  
Sbjct: 754 KNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNV 813

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  L+D    +G +PD
Sbjct: 814 MEARGLFDRFKASGGVPD 831



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K        KLF ++ ++GL  D++ YNT+I G+C   ++D+A QL E++    L+P 
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D   K  R+D+A M+F +    G   NVV YS LIDG+ K   +  A+ + E
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN  +++ L+D L K   ++EA   F    +    P+ +TY+I+I G C   
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIR 776

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G+ P+ +  +T+
Sbjct: 777 KFNKAFVFWQEMQKQGLKPNNITYTTM 803



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 111/210 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K   L+AALK+   + + GL P+I+T N +I   C   +LDEA  +F  L      P
Sbjct: 421 MLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSP 480

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S TF  LID   + GR+DDA  ++ KML+     NVV Y+ LI  +FK    +    +Y
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM     SP+++  +  +D + K G +E+    F       L+PDV +Y+ILI G  KA
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKA 600

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   E  +L+  M   G+  D L  +T+ D
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVID 630



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K F ++  +GL PD +TY T+I   C   RLDEAV+LFE+L   +  P    +  
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNT 348

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +   G+ D+A  +  +   KG   +V+ Y+C++    +   ++ A  +++EM   +
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQD 407

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+ +Y+ILID LCK G +E AL       +  L P+++T  I+I   CKA +  EA 
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            ++  +      PD     +L D
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLID 490



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 34/244 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-------- 52
           +L K   LD A++LF +L      P +  YNT+I GY S  + DEA  L E+        
Sbjct: 317 VLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIP 376

Query: 53  --------LTCVQLK------------------PNSITFTILIDAFCKEGRMDDATMMFS 86
                   LTC+  K                  PN  T+ ILID  CK G ++ A  +  
Sbjct: 377 SVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQD 436

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M E G   N++T + +ID   K+Q +  A  ++  +     SP+  ++  LIDGL +RG
Sbjct: 437 TMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRG 496

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A   +   LD+  +P+VV Y  LI+ + K GR  +  ++Y  M+  G  PD +LL+
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLN 556

Query: 207 TLAD 210
           +  D
Sbjct: 557 SYMD 560



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 1/222 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +E  +DAAL L  ++       D++ YN  I  +  + ++D A + F ++    L P
Sbjct: 247 VFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVP 306

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T LI   CK  R+D+A  +F ++        V  Y+ +I GY  +     A+ + 
Sbjct: 307 DDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLL 366

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E        P++++Y+ ++  L ++G +EEAL   H  +     P++ TY ILI   CKA
Sbjct: 367 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL-RIHDEMRQDAAPNLTTYNILIDMLCKA 425

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G    A+++ D+M   G+ P+ + ++ + D   ++    E C
Sbjct: 426 GELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 105/198 (53%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++  RG  PD++  N+ +        +++   LFE++    L P+  +++ILI   
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +   +F +M E+G   +V+ Y+ +IDG+ KS  +  A+ + EEM    + P +
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  ++DGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 658 VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 718 LMQKGLTPNSYTWNCLLD 735



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 92/199 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   L  A  +   +      P    Y T+I    + NR D  + LF ++  +  + N
Sbjct: 178 FVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEAN 237

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT L+  F +EGR+D A  +  +M      A++V Y+  ID + K   +  A+  + 
Sbjct: 238 VHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFH 297

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+ V+Y+ LI  LCK   ++EA+  F     N  +P V  Y  +I GY  AG
Sbjct: 298 EMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAG 357

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  EA  L +   R G +P
Sbjct: 358 KFDEAYSLLERQKRKGCIP 376



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  +F  L  +   PD  T+ ++I G     R+D+A  L+EK+      PN
Sbjct: 457 LCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPN 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG--P-------------------------- 93
            + +T LI  F K GR +D   ++ +M+ +G  P                          
Sbjct: 517 VVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576

Query: 94  --KA-----NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
             KA     +V +YS LI G  K+   +  + ++ EM E  +  ++++Y+ +IDG CK G
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A           L P VVTY  ++ G  K  R  EA  L++     G+  + ++ S
Sbjct: 637 KVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYS 696

Query: 207 TLAD 210
           +L D
Sbjct: 697 SLID 700



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 86/168 (51%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++  +   ++L EA  + E +   + +P    +T LI A     R D    +F +M E G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            +ANV  ++ L+  + +   + +A  + +EM  N+ + ++V Y++ ID   K G ++ A 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             FH      L+PD VTY  LI   CKA R  EA++L++ +  N  +P
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVP 341



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 74/150 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D A   F  + +    P+ +TY+ +I G C + + ++A   ++++    LKPN
Sbjct: 737 LVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPN 796

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T +I    K G + +A  +F +    G   +   Y+ +I+G   +     A+ V+E
Sbjct: 797 NITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFE 856

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E        N  +  +L+D L K   +E+A
Sbjct: 857 ETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 46/108 (42%)

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           L+  + KS  +K AF V E M +    P   +Y+ LI  L      +  L  FH   +  
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +V  +  L+R + + GR   A+ L D M  N    D +L +   D
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCID 281


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 108/198 (54%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   +    +L+ ++  R  +PD ITYN +I      N LD+A+  F  L     +P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  LID   K GR+++A  +F +M + G K N   ++ LI+GY K  + ++A  +++ M
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                I P++ SY+IL+D LC  G ++EALY F+      L PD + Y  +I G  K+ R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ LY+ M   GI+PD
Sbjct: 1015 EEALALYNEMRNRGIVPD 1032



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 113/200 (56%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   L+ A++LF +++D G +P+   +N +I GY  +   + A QLF+++    ++P+
Sbjct: 903  LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TIL+D  C  GR+D+A   F+++   G   + + Y+ +I+G  KSQ M+ A  +Y 
Sbjct: 963  LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM    I P++ +Y+ L+  L   G++E+A   +       L PDV TY  LIRGY  + 
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
             P  A  +Y +M+ +G  P+
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPN 1102



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 107/198 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ D GL P++ T+   I       ++DEA ++F ++      P+ +T+T+LIDA C
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             G++++A  +F KM   G K + V Y  L+D +    ++ +  + + +M  +   P++V
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++IL+D LCK    +EA   F       +LP++ TY  LI G  +AGR  +A++L D+M
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM 428

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+ P      T  DY
Sbjct: 429 ESVGVQPTAYTYITFIDY 446



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K    D A   F  +  +G+ P++ TYNT+ICG     R+++A++L + +  V ++P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQP 435

Query: 61  NSITFTILIDAFCKEG-----------------------------------RMDDATMMF 85
            + T+   ID F K G                                   R+ +A  MF
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + + E G   + VTY+ ++  Y K   +  A ++  EM  N   P+++  + LID L K 
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKA 555

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++EA   F    D  L P VVTY  L+ G  K GR  +A++L++SM+     P+ +  
Sbjct: 556 GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISF 615

Query: 206 STLAD 210
           +TL D
Sbjct: 616 NTLLD 620



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A  +F  L + GL PD +TYN ++  Y  + ++DEAV L  ++     +P+ I   
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID+  K GR+D+A  MF +M +      VVTY+ L+ G  K   ++ A +++E M   
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN +S++ L+D  CK   +E AL  F         PDV+TY  +I G  K  +   A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
              +   L+  + PD + + TL
Sbjct: 667 FWFFHQ-LKKSMHPDHVTICTL 687



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 103/203 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   + + Q+   G  PD++T+  ++   C     DEA   F+ +    + PN  T+  
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    + GR++DA  +   M   G +    TY   ID + KS     A + +E+M    
Sbjct: 408 LICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PNIV+ +  +  L + G + EA   F+   +N L PD VTY ++++ Y K G+  EA+
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M+RNG  PD +++++L D
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLID 550



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 107/200 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  +LD AL  F  L      P   TY  +I G   + RL+EA++LFE+++    KPN
Sbjct: 868  LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               F ILI+ + K G  + A  +F +M+ +G + ++ +Y+ L+D    +  +  A   + 
Sbjct: 928  CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFN 987

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            E+    + P+ ++Y+ +I+GL K   MEEAL  ++   +  ++PD+ TY  L+     AG
Sbjct: 988  ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
               +A ++Y+ +   G+ PD
Sbjct: 1048 MVEQAKRMYEELQLAGLEPD 1067



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 107/201 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   +D A ++F ++ D G  PD++TY  +I   C+  +L+ A +LF K+     KP
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  L+D F   G +D     +S+M   G   +VVT++ L+D   K+++   AF  +
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +  I PN+ +Y+ LI GL + G +E+AL          + P   TY   I  + K+
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   +A++ ++ M   GI+P+
Sbjct: 451 GETGKAVETFEKMKAKGIVPN 471



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A ++F + T + G+ P + +YN +I     ++  ++A  LF+ +  V   P++ TF +L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
               K G++ +   ++ +M+ +  K + +TY+ +I    KS N+  A D + ++  ++  
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   +Y  LIDGL K G +EEA+  F    D    P+   + ILI GY K G    A QL
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+  GI PD    + L D
Sbjct: 951 FKRMVNEGIRPDLKSYTILVD 971



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      A++ F ++  +G+ P+I+  N  +     + RL EA  +F  L    L P+S+
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +++  + K G++D+A  + S+M+  G + +V+  + LID  +K+  +  A+ +++ M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +SP +V+Y+ L+ GL K G +++A+  F   +     P+ +++  L+  +CK    
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A++++  M      PD L  +T+  Y L       H  
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVI-YGLIKENKVNHAF 667



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 44/248 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++F ++ D  L P ++TYNT++ G     R+ +A++LFE +   +  PN
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I+F  L+D FCK   ++ A  MFSKM     K +V+TY+ +I G  K   +  AF  + 
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA-------LYAFHCALDNHLLPDVVTYAI-- 172
           ++ + ++ P+ V+   L+ GL K G + +A       +Y     ++     D++   +  
Sbjct: 672 QL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730

Query: 173 ---------------------------LIRGYCKAGRPTEAMQLYDSMLRN-GIMPDGLL 204
                                      L+R  CK  R   A Q++D   +  GI P    
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP---- 786

Query: 205 LSTLADYN 212
             TLA YN
Sbjct: 787 --TLASYN 792



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 73/132 (55%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             +D AL  F +L   GL+PD I YN II G     R++EA+ L+ ++    + P+  T+ 
Sbjct: 978  RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+      G ++ A  M+ ++   G + +V TY+ LI GY  S+N + A+ VY+ M  +
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097

Query: 127  NISPNIVSYSIL 138
              +PNI +Y+ L
Sbjct: 1098 GCNPNIGTYAQL 1109



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 95/197 (48%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  + +  D+ TY TI         L +   +  K+       N+ ++  LI    
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G   +A  ++ +M+ +G K ++ TYS L+    K ++ +    + +EM +  + PN+ 
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++I I  L + G ++EA   F    D    PD+VTY +LI   C AG+   A +L+  M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 194 LRNGIMPDGLLLSTLAD 210
             NG  PD ++  TL D
Sbjct: 324 KANGHKPDQVIYITLLD 340



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 14  LFGQLTDRGLEPDIITYNTII-----CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +  ++   G   +  +YN +I      G+C      EA++++ ++    LKP+  T++ L
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCG-----EALEVYRRMVSEGLKPSLKTYSAL 233

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + A  K+   +   ++  +M + G + NV T++  I    ++  +  A++++  M +   
Sbjct: 234 MVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGC 293

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y++LID LC  G +E A   F     N   PD V Y  L+  +   G      +
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKE 353

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
            +  M  +G MPD +  + L D
Sbjct: 354 FWSQMEADGYMPDVVTFTILVD 375



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 86/165 (52%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            + A +LF ++ + G+ PD+ +Y  ++   C   R+DEA+  F +L    L P+ I +  +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            I+   K  RM++A  ++++M  +G   ++ TY+ L+     +  ++ A  +YEE+    +
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064

Query: 129  SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             P++ +Y+ LI G       E A   +   + +   P++ TYA L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           +++++   +FE +    ++ +  T+  +  A    G +   T + +KM + G   N  +Y
Sbjct: 136 DKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + LI    +S     A +VY  M    + P++ +YS L+  L K+   E  +       D
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L P+V T+ I IR   +AG+  EA +++  M   G  PD +  + L D
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 55/102 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   ++ AL L+ ++ +RG+ PD+ TYN+++        +++A +++E+L    L+P+
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
              T+  LI  +      + A  ++  M+  G   N+ TY+ L
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 116/195 (59%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  AL +F Q+ + G EPD +TY T+I  +     LD A+ ++E++  V L P++ T++
Sbjct: 433 YLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYS 492

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+   K G +  A  +F +M+++G   N+VTY+ LI    K++N ++A ++Y +M   
Sbjct: 493 VMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNA 552

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+YSI+++ L   G +EEA   F     NH +PD   Y +L+  + KAG   +A
Sbjct: 553 GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKA 612

Query: 187 MQLYDSMLRNGIMPD 201
            + Y +MLR G++P+
Sbjct: 613 WEWYHTMLRAGLLPN 627



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 94/193 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ ++ ++ + GL PD  TY+ +I        L  A +LF ++      PN +T+ I
Sbjct: 469 LDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNI 528

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K      A  ++  M   G K + VTYS +++       ++ A  V+ EM +N+
Sbjct: 529 LIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNH 588

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+   Y +L+D   K G +E+A   +H  L   LLP+V T   L+  + +  R  +A 
Sbjct: 589 WVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAY 648

Query: 188 QLYDSMLRNGIMP 200
            L  +M+  G+ P
Sbjct: 649 NLLQNMVTLGLNP 661



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 90/182 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L AA +LF ++ D+G  P+I+TYN +I           A++L+  +     KP+
Sbjct: 498 LGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPD 557

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+++     G +++A  +F +M +     +   Y  L+D + K+ N++ A++ Y 
Sbjct: 558 KVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYH 617

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN+ + + L+    +   + +A       +   L P + TY +L+    +A 
Sbjct: 618 TMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQ 677

Query: 182 RP 183
            P
Sbjct: 678 SP 679



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 72/138 (52%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T ++    +         +  +M++ G + NVVTY+ LI  Y ++  ++ A +V+ +M
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM 444

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P+ V+Y  LID   K G ++ A+  +    +  L PD  TY+++I    K+G  
Sbjct: 445 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 504

Query: 184 TEAMQLYDSMLRNGIMPD 201
           + A +L+  M+  G +P+
Sbjct: 505 SAAHRLFCEMVDQGCVPN 522



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 55/110 (50%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ ++    +++   +   + E+M ++   PN+V+Y+ LI    +   + EAL  F+  
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM 444

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +    PD VTY  LI  + KAG    AM +Y+ M   G+ PD    S +
Sbjct: 445 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVM 494



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 4/167 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A + +  +   GL P++ T N+++  +  ++RL +A  L + +  + L P+  
Sbjct: 605 KAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQ 664

Query: 64  TFTILIDAFCKEGRMD-DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           T+T+L+   C E +   D       M   G  A+    S    G    QN++     + +
Sbjct: 665 TYTLLLSC-CTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGP-DGQNVRDHVSKFLD 722

Query: 123 MCENNISPNIVSY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +  +            ++D L K GL EEA   +  A   ++ PD V
Sbjct: 723 LMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 769


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 108/198 (54%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   +    +L+ ++  R  +PD ITYN +I      N LD+A+  F  L     +P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  LID   K GR+++A  +F +M + G K N   ++ LI+GY K  + ++A  +++ M
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                I P++ SY+IL+D LC  G ++EALY F+      L PD + Y  +I G  K+ R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ LY+ M   GI+PD
Sbjct: 1015 EEALALYNEMRNRGIVPD 1032



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 113/200 (56%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   L+ A++LF +++D G +P+   +N +I GY  +   + A QLF+++    ++P+
Sbjct: 903  LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TIL+D  C  GR+D+A   F+++   G   + + Y+ +I+G  KSQ M+ A  +Y 
Sbjct: 963  LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM    I P++ +Y+ L+  L   G++E+A   +       L PDV TY  LIRGY  + 
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
             P  A  +Y +M+ +G  P+
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPN 1102



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A  +F  L + GL PD +TYN ++  Y  + ++DEAV L  ++     +P+ I   
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID+  K GR+D+A  MF +M +      VVTY+ L+ G  K   ++ A +++E M E 
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK 606

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SPN +S++ L+D  CK   +E AL  F         PDV+TY  +I G  K  +   A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
              +   L+  + PD + + TL
Sbjct: 667 FWFFHQ-LKKSMHPDHVTICTL 687



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K    D A   F  +  +G+ P++ TYNT+ICG     R+++A++L   +  V ++P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435

Query: 61  NSITFTILIDAFCKEG-----------------------------------RMDDATMMF 85
            + T+ I ID F K G                                   R+ +A  MF
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + + E G   + VTY+ ++  Y K   +  A ++  EM  N   P+++  + LID L K 
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKA 555

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++EA   F    D  L P VVTY  L+ G  K GR  +A++L++SM+     P+ +  
Sbjct: 556 GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISF 615

Query: 206 STLAD 210
           +TL D
Sbjct: 616 NTLLD 620



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 104/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   + + Q+   G  PD++T+  ++   C     DEA   F+ +    + PN  T+  
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    + GR++DA  +   M   G +    TY+  ID + KS     A + +E+M    
Sbjct: 408 LICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PNIV+ +  +  L + G + EA   F+   +N L PD VTY ++++ Y K G+  EA+
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M+RNG  PD +++++L D
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLID 550



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 106/198 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ D GL P++ T+   I       ++DEA ++F ++      P+ +T+T+LIDA C
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             G++++A  +F KM   G K + V Y  L+D +    ++ +  + + +M  +   P++V
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++IL+D LCK    +EA   F       +LP++ TY  LI G  +AGR  +A++L  +M
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM 428

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+ P     +   DY
Sbjct: 429 ESVGVQPTAYTYNIFIDY 446



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 108/201 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +   +D A ++F ++ D G  PD++TY  +I   C+  +L+ A +LF K+     KP
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + +  L+D F   G +D     +S+M   G   +VVT++ L+D   K+++   AF  +
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M +  I PN+ +Y+ LI GL + G +E+AL          + P   TY I I  + K+
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   +A++ ++ M   GI+P+
Sbjct: 451 GETGKAVETFEKMKAKGIVPN 471



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 107/200 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K  +LD AL  F  L      P   TY  +I G   + RL+EA++LFE+++    KPN
Sbjct: 868  LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               F ILI+ + K G  + A  +F +M+ +G + ++ +Y+ L+D    +  +  A   + 
Sbjct: 928  CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFN 987

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            E+    + P+ ++Y+ +I+GL K   MEEAL  ++   +  ++PD+ TY  L+     AG
Sbjct: 988  ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
               +A ++Y+ +   G+ PD
Sbjct: 1048 MVEQAKRMYEELQLAGLEPD 1067



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A ++F + T + G+ P + +YN +I     ++  ++A  LF+ +  V   P++ TF +L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
               K G++ +   ++ +M+ +  K + +TY+ +I    KS N+  A D + ++  ++  
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P   +Y  LIDGL K G +EEA+  F    D    P+   + ILI GY K G    A QL
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+  GI PD    + L D
Sbjct: 951 FKRMVNEGIRPDLKSYTILVD 971



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      A++ F ++  +G+ P+I+  N  +     + RL EA  +F  L    L P+S+
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +++  + K G++D+A  + S+M+  G + +V+  + LID  +K+  +  A+ +++ M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +SP +V+Y+ L+ GL K G +++A+  F   ++    P+ +++  L+  +CK    
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A++++  M      PD L  +T+  Y L       H  
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVI-YGLIKENKVNHAF 667



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 44/248 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++F ++ D  L P ++TYNT++ G     R+ +A++LFE +   +  PN
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPN 611

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I+F  L+D FCK   ++ A  MFSKM     K +V+TY+ +I G  K   +  AF  + 
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA-------LYAFHCALDNHLLPDVVTYAI-- 172
           ++ + ++ P+ V+   L+ GL K G + +A       +Y     ++     D++   +  
Sbjct: 672 QL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730

Query: 173 ---------------------------LIRGYCKAGRPTEAMQLYDSMLRN-GIMPDGLL 204
                                      L+R  CK  R   A Q++D   +  GI P    
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISP---- 786

Query: 205 LSTLADYN 212
             TLA YN
Sbjct: 787 --TLASYN 792



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 73/132 (55%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             +D AL  F +L   GL+PD I YN II G     R++EA+ L+ ++    + P+  T+ 
Sbjct: 978  RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+      G ++ A  M+ ++   G + +V TY+ LI GY  S+N + A+ VY+ M  +
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097

Query: 127  NISPNIVSYSIL 138
              +PNI +Y+ L
Sbjct: 1098 GCNPNIGTYAQL 1109



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 95/197 (48%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  + +  D+ TY TI         L +   +  K+       N+ ++  LI    
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G   +A  ++ +M+ +G K ++ TYS L+    K ++ +    + +EM +  + PN+ 
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++I I  L + G ++EA   F    D    PD+VTY +LI   C AG+   A +L+  M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 194 LRNGIMPDGLLLSTLAD 210
             NG  PD ++  TL D
Sbjct: 324 KANGHKPDQVIYITLLD 340



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 14  LFGQLTDRGLEPDIITYNTII-----CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +  ++   G   +  +YN +I      G+C      EA++++ ++    LKP+  T++ L
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCG-----EALEVYRRMVSEGLKPSLKTYSAL 233

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + A  K+   +   ++  +M + G + NV T++  I    ++  +  A++++  M +   
Sbjct: 234 MVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGC 293

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y++LID LC  G +E A   F     N   PD V Y  L+  +   G      +
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKE 353

Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
            +  M  +G MPD +  + L D
Sbjct: 354 FWSQMEADGYMPDVVTFTILVD 375



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 86/165 (52%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            + A +LF ++ + G+ PD+ +Y  ++   C   R+DEA+  F +L    L P+ I +  +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            I+   K  RM++A  ++++M  +G   ++ TY+ L+     +  ++ A  +YEE+    +
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064

Query: 129  SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             P++ +Y+ LI G       E A   +   + +   P++ TYA L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           +++++   +FE +    ++ +  T+  +  A    G +   T + +KM + G   N  +Y
Sbjct: 136 DKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSY 195

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + LI    +S     A +VY  M    + P++ +YS L+  L K+   E  +       D
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED 255

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L P+V T+ I IR   +AG+  EA +++  M   G  PD +  + L D
Sbjct: 256 LGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 55/102 (53%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   ++ AL L+ ++ +RG+ PD+ TYN+++        +++A +++E+L    L+P+
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
              T+  LI  +      + A  ++  M+  G   N+ TY+ L
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 1/201 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LDAAL L  ++      P  ++Y T++   C+  R  +AV L   +    ++P+ +T+  
Sbjct: 95  LDAALFLL-RVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGT 153

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C    +D A  +  +M E G + NVV YSCL+ GY K+   +    V+EEM    
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++V Y+ LID LC+ G +++A       ++  L P+VVTY +LI   CK G   EAM
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L ++ML  G+  D +  +TL
Sbjct: 274 SLRNNMLEKGVALDAVTYNTL 294



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 108/198 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E     A+ L   +   G+ PD++TY T+I G C    +D+AV+L  ++    ++PN
Sbjct: 123 LCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPN 182

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ L+  +CK GR +  + +F +M  +G + +VV Y+ LID   +   +K A  V +
Sbjct: 183 VVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMD 242

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  + PN+V+Y++LI+ +CK G ++EA+   +  L+  +  D VTY  LI G     
Sbjct: 243 KMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVL 302

Query: 182 RPTEAMQLYDSMLRNGIM 199
              EAM L + M+    M
Sbjct: 303 EMDEAMGLLEEMIHGETM 320



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 89/176 (50%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D ++YNT++   C      +A     ++   + +P ++++T L+ A C E R   A  + 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M   G + +VVTY  LI G   + ++  A ++  EMCE+ I PN+V YS L+ G CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           G  E     F       + PDVV Y  LI   C+ G+  +A Q+ D M+  G+ P+
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A++L  ++   GLEPD  TY+ +I G+C + ++D A  L  K+    ++P 
Sbjct: 370 LLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  L+ A C++G M+ A   F +M  K  K +VV YS +I G  + ++ KSA +  +
Sbjct: 430 LVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLK 488

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P+ V+YS+LI+     G +  A         +  +PDV  +  LI+GY   G
Sbjct: 489 HMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKG 548

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + ++L   M    I  D  ++ST+
Sbjct: 549 DTEKVLELIREMTAKDIALDSKIISTI 575



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++   + + G   +++T+N +I G   ++++ +A++L +++    L+P+
Sbjct: 335 LCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPD 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T++ILI+ FCK  ++D A  + SKM   G +  +V Y  L+    +   M+ A + ++
Sbjct: 395 SFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFD 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N   ++V+YS +I G C+    + A       LD  L+PD VTY++LI  +  +G
Sbjct: 455 EM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSG 513

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A ++   M  +G +PD  +  +L
Sbjct: 514 DLGAAERVLKQMTASGFVPDVAVFDSL 540



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 3/204 (1%)

Query: 7   HLDAALKLFGQLT--DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
            +D A+ L  ++   +  +EP+++T+N++I G C   R+ +A Q+ + +       N +T
Sbjct: 303 EMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVT 362

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F +LI    +  ++  A  +  +M   G + +  TYS LI+G+ K   +  A  +  +M 
Sbjct: 363 FNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMR 422

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I P +V Y  L+  LC++G+ME+A   F     N  L DVV Y+ +I G C+     
Sbjct: 423 RDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRK 481

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A +    ML  G++PD +  S L
Sbjct: 482 SAEEFLKHMLDEGLIPDSVTYSML 505



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 3/174 (1%)

Query: 40  LNRLDEAVQLFEKLTCVQLKP---NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           LNRL   V L E    +   P   +++++  ++ A C++G   DA +   +++    +  
Sbjct: 53  LNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPT 112

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            V+Y+ L+      +    A  +  +M  + + P++V+Y  LI GLC    +++A+    
Sbjct: 113 AVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLR 172

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              ++ + P+VV Y+ L++GYCKAGR     ++++ M   GI PD ++ + L D
Sbjct: 173 EMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLID 226


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNS 62
            +  AL+L  ++ + G  PD +T+N ++ G C  N +    ++  +L     C+   PN 
Sbjct: 266 QVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCM---PNV 322

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT +I  +CK G+++DA  +++ M+  G   N VTY+ LI+GY K  ++ SA +VY++
Sbjct: 323 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 382

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      P++V++S LIDG C+ G +++AL  +     + + P+V T++I+I   CK  R
Sbjct: 383 MTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNR 442

Query: 183 PTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
             EA+ L + + LR  I P   + + + D
Sbjct: 443 SDEAIGLLNELNLRPDIAPQAFIYNPVID 471



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 112/202 (55%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQ-LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI    +   + LF + + DR   PD+ ++N +I G C + ++ +A++L E++      P
Sbjct: 225 LIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSP 284

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDV 119
           +++T  IL+D  C+   +     +  ++   G    NVVT++ +I GY K+  ++ A  V
Sbjct: 285 DTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 344

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y +M  + I PN V+Y++LI+G  K G +  A+  +         PDVVT++ LI GYC+
Sbjct: 345 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 404

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
            G+  +A++++  M ++ I P+
Sbjct: 405 CGQLDDALRIWSDMAQHRIQPN 426



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 1/204 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+ ++  +   G+ P+ +TYN +I GY  +  L  AV++++++T ++  P+ +
Sbjct: 334 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 393

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA  ++S M +   + NV T+S +I    K      A  +  E+
Sbjct: 394 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 453

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P    Y+ +ID LCK G ++EA        +    PD  TY ILI GYC   R
Sbjct: 454 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 513

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLS 206
            +EA+  +  M+  G  PD + ++
Sbjct: 514 ISEAIMFFHEMVEAGCSPDSITVN 537



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFT 66
           LDA+  L  + ++ G   +   YN ++       R+ + V LFE+    ++  P+  +F 
Sbjct: 196 LDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFN 255

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   C+ G++  A  +  +M E G   + VT++ L+DG  ++  +    +V   +  +
Sbjct: 256 VVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRD 315

Query: 127 NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN+V+++ +I G CK G +E+A+  ++  + + ++P+ VTY +LI GY K G    
Sbjct: 316 GVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGS 375

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++Y  M R    PD +  S+L D
Sbjct: 376 AVEVYQQMTRLRCPPDVVTFSSLID 400



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 1/179 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A++++ Q+T     PD++T++++I GYC   +LD+A++++  +   +++PN  TF+I
Sbjct: 373 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 432

Query: 68  LIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +I + CK+ R D+A  + +++ L          Y+ +ID   K   +  A  + + M E 
Sbjct: 433 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 492

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              P+  +Y+ILI G C +  + EA+  FH  ++    PD +T    I    KAG P E
Sbjct: 493 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 551



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITF 65
            LD AL+++  +    ++P++ T++ II   C  NR DEA+ L  +L     + P +  +
Sbjct: 407 QLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIY 466

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +ID  CK G++D+A ++   M EKG + +  TY+ LI GY     +  A   + EM E
Sbjct: 467 NPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 526

Query: 126 NNISPNIVSYSILIDGLCKRGLMEE 150
              SP+ ++ +  I  L K G+  E
Sbjct: 527 AGCSPDSITVNCFISCLLKAGMPNE 551



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 75/239 (31%)

Query: 45  EAVQLFEKLTC--VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVT 99
            A+ +F  L C  + + P++ +   +I   C+ GR  DA  +F +M       P A  ++
Sbjct: 125 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLS 184

Query: 100 ------------------------YSCLIDGYFKSQNMKS---------AFDVYEEMCEN 126
                                   + C ++ Y  ++ M S            ++E   ++
Sbjct: 185 FLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 244

Query: 127 NI-SPNIVSYSILIDGLCKRGLMEEALY------AFHCALD--------------NHL-- 163
            + SP++ S++++I G+C+ G +++AL        F C+ D              N +  
Sbjct: 245 RVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSR 304

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                         +P+VVT+  +I GYCKAG+  +AM +Y+ M+ +GIMP+ +  + L
Sbjct: 305 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 363


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 112/210 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++   KLF +L  + LE + + YNT+I  YC      EA +L + +    + P + T++ 
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GRM+DA  +  +M ++G   NVV Y+ LI GY K   M    +V +EM   +
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN ++Y+++IDG  K G M+ A    H  +   ++PD VTY +L  G+CK G+  E  
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           ++ D M + G+  D +  +TL     Q S 
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHGWQQPSA 821



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L+ +  +F +   +G+ PD+  ++T I  +C   ++++A+QLF  +  + + PN
Sbjct: 222 LVKANELEKSYWVF-ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 280

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK G +D+A     KM++ G  A ++TYS LI+G  K +    A  V +
Sbjct: 281 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E  E   +PN V Y+ LIDG CK G + +AL      +   + P+ VT   +I+G+CK G
Sbjct: 341 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 400

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           +  +A  + + ML  G   +    +T+  +
Sbjct: 401 QMEQAECILEEMLSRGFSINPGAFTTIIHW 430



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIIC-------------------------- 35
           L K  ++  A++L  ++ +RG   D ITYNT+I                           
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 560

Query: 36  ---------GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                    G C + +LDEAV L+ +     L PN  T+ ++ID +CK  ++++   +F+
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           ++L +  + N V Y+ LI  Y ++ N   AF ++++M    I P   +YS LI G+C  G
Sbjct: 621 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 680

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ME+A           LLP+VV Y  LI GYCK G+  + + +   M    I P+ +  +
Sbjct: 681 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 740

Query: 207 TLAD 210
            + D
Sbjct: 741 VMID 744



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 109/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             ++AL+   ++  R + P+     T++ G C   +  +AV+L+ +L       N +T  
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   CK G M +A  +  KMLE+G   + +TY+ LI G  K   ++  F +  EM + 
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P+  +Y++LI G+C+ G ++EA+  ++      L+P+V TY ++I GYCKA +  E 
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L+  +L   +  + ++ +TL
Sbjct: 616 EKLFTELLTQNLELNSVVYNTL 637



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 1/198 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F  L ++G+ P + T   ++      N L+++  +FE +    + P+   F+  I+
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAIN 254

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFCK G+++DA  +F  M + G   NVVTY+ LI G  K  N+  AF   E+M ++ ++ 
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++YS+LI+GL K     EA       L+    P+ V Y  LI GYCK G   +A+++ 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  GI P+ + L+++
Sbjct: 375 GDMVSKGINPNSVTLNSI 392



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 35/233 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSL----------------------- 40
           K  +L  AL++ G +  +G+ P+ +T N+II G+C +                       
Sbjct: 363 KMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG 422

Query: 41  ------------NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                       +R + A++   ++    ++PN    T L+   CKEG+  DA  ++ ++
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           LEKG  AN+VT + LI G  K+ NM+ A  + ++M E     + ++Y+ LI G CK G +
Sbjct: 483 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           EE        +   + PD  TY +LI G C+ G+  EA+ L++      ++P+
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A  +  +  ++G  P+ + YNT+I GYC +  L +A+++   +    + PN
Sbjct: 326 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 385

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T   +I  FCK G+M+ A  +  +ML +G   N   ++ +I     +   +SA     
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 445

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N+ PN    + L+ GLCK G   +A+  +   L+     ++VT   LI G CK G
Sbjct: 446 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA++L   ML  G + D +  +TL
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTL 532



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +LD A +   ++   G+   +ITY+ +I G   L + +EA  + ++       PN
Sbjct: 291 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 350

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  LID +CK G + DA  +   M+ KG   N VT + +I G+ K   M+ A  + E
Sbjct: 351 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILE 410

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     S N  +++ +I  LC     E AL      L  ++ P+      L+ G CK G
Sbjct: 411 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEG 470

Query: 182 RPTEAMQLYDSMLRNGI 198
           + ++A++L+  +L  G 
Sbjct: 471 KHSDAVELWFRLLEKGF 487



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 4/135 (2%)

Query: 67  ILIDAFCKEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +LI  +C + R     +A  +F  +  KG    V T + L+    K+  ++ ++ V+E M
Sbjct: 179 LLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM 238

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +SP++  +S  I+  CK G +E+A+  F       + P+VVTY  LI G CK G  
Sbjct: 239 -RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297

Query: 184 TEAMQLYDSMLRNGI 198
            EA +  + M+++G+
Sbjct: 298 DEAFRFKEKMVKDGV 312



 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 38/69 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A KL  ++  +G+ PD +TYN +  G+C   +++E  ++ + ++   L  + I
Sbjct: 748 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEI 807

Query: 64  TFTILIDAF 72
           T+T L+  +
Sbjct: 808 TYTTLVHGW 816


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 17/220 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  +  ++  +G  PD  TY+ +I   C+ +++++A QLF+++    + P+   +T 
Sbjct: 203 FEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTT 262

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+FCK G ++ A   F +M   G   NVVTY+ LI  Y KS+ +  A +VYE M    
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCA---------LDNHLL--------PDVVTY 170
            +PNIV+Y+ LIDGLCK G +E+A   +            +D H          P+V TY
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             L+ G CKA +  EA  L  SM   G  P+ ++   L D
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALID 422



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 105/188 (55%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EP++ TY  ++ G C   ++ EA  L + ++    +PN + +  LID  CK G++D+A  
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F+ MLE G   NV TYS LID  FK + +  A  V  +M EN+ +PN+V Y+ +IDGLC
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  +EA        +    P+VVTY  +I G+ K+GR  + ++L   M   G  P+ +
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFV 555

Query: 204 LLSTLADY 211
               L ++
Sbjct: 556 TYRVLINH 563



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L   ++  G EP+ + Y+ +I G C   +LDEA ++F  +      PN
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID   K+ R+D A  + SKMLE     NVV Y+ +IDG  K      A+ +  
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV 508

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   +PN+V+Y+ +IDG  K G +E+ L            P+ VTY +LI   C  G
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568

Query: 182 RPTEAMQLYDSM 193
              EA +L + M
Sbjct: 569 LLDEAHKLLEEM 580



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A   F ++   G  P+++TY  +I  Y    ++ +A +++E +      PN +
Sbjct: 269 KAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIV 328

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK-----------------GPKANVVTYSCLIDG 106
           T+T LID  CK G+++ A+ ++  M ++                   + NV TY  L+DG
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
             K+  +K A D+ + M      PN V Y  LIDG CK G ++EA   F   L+    P+
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           V TY+ LI    K  R   A+++   ML N   P+ ++ + + D
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMID 492



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 5/205 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-----LDEAVQLFEKLTCVQLKPNSITF 65
           A KL  ++   G +P  + YN +I G CS        LD A + + ++    +  N +  
Sbjct: 131 AYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNI 190

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +      C  G+ + A  +  +M+ KG   +  TYS +I     +  ++ AF +++EM  
Sbjct: 191 SNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR 250

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           N I+P++  Y+ LID  CK G +E+A   F     +   P+VVTY  LI  Y K+ + ++
Sbjct: 251 NGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSK 310

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A ++Y+ ML  G  P+ +  + L D
Sbjct: 311 ANEVYEMMLSKGCTPNIVTYTALID 335



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 1/195 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K +G++ + G+  + +  +      C + + ++A  +  ++      P++ T++ 
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSK 227

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C   +++ A  +F +M   G   +V  Y+ LID + K+  ++ A + ++EM  + 
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN+V+Y+ LI    K   + +A   +   L     P++VTY  LI G CKAG+  +A 
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKAS 347

Query: 188 QLYDSMLRNGI-MPD 201
           Q+Y  M +  + +PD
Sbjct: 348 QIYKIMKKENVEIPD 362



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 2/192 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD ALK+  ++ +    P+++ Y  +I G C + + DEA +L   +      PN
Sbjct: 459 LFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPN 518

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID F K GR++    +  +M  KG   N VTY  LI+    +  +  A  + E
Sbjct: 519 VVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +     ++  Y  +I+G   R  +     +F  + +N  +P    Y +LI  + KAG
Sbjct: 579 EMKQTYWPRHVAGYRKVIEGF-NREFIASLYLSFEIS-ENDSVPVAPVYRVLIDNFIKAG 636

Query: 182 RPTEAMQLYDSM 193
           R   A++L + +
Sbjct: 637 RLEIALELNEEL 648



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 11/211 (5%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++   +   G  P    +N+++  YC       A +L +K+     +P  + + ILI   
Sbjct: 98  RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGI 157

Query: 73  C---KEGR--MDDATMMFSKMLEKG---PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           C   + G+  +D A   + +MLE G    K N+  +S  + G  K    + A++V  EM 
Sbjct: 158 CSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGK---FEKAYNVIREMM 214

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                P+  +YS +I  LC    +E+A   F     N + PDV  Y  LI  +CKAG   
Sbjct: 215 SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIE 274

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           +A   +D M R+G  P+ +  + L    L+S
Sbjct: 275 QARNWFDEMERDGCAPNVVTYTALIHAYLKS 305



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 40/226 (17%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD + Y  +I G C  +  +EA+    ++      PN +T+ IL+     + ++     +
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S M+ +G   +   ++ L+  Y +S +   A+ + ++M +    P  V Y+ILI G+C 
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159

Query: 145 R----------------------------------------GLMEEALYAFHCALDNHLL 164
                                                    G  E+A       +    +
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           PD  TY+ +I   C A +  +A QL+  M RNGI PD  + +TL D
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLID 265



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 35/184 (19%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK---- 59
           K   ++  L+L  Q++ +G  P+ +TY  +I   CS   LDEA +L E++          
Sbjct: 531 KSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVA 590

Query: 60  -----------------------------PNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                        P +  + +LID F K GR++ A  +  ++  
Sbjct: 591 GYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSS 650

Query: 91  KGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             P   AN   +  LI+    +     AF++Y +M      P +     LI GL +    
Sbjct: 651 FSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRW 710

Query: 149 EEAL 152
           EEAL
Sbjct: 711 EEAL 714


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 119/209 (56%), Gaps = 8/209 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNS 62
            +  AL+L  ++ + G  PD +T+N ++ G C  N +    ++  +L     C+   PN 
Sbjct: 97  QVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCM---PNV 153

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT +I  +CK G+++DA  +++ M+  G   N VTY+ LI+GY K  ++ SA +VY++
Sbjct: 154 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 213

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      P++V++S LIDG C+ G +++AL  +     + + P+V T++I+I   CK  R
Sbjct: 214 MTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNR 273

Query: 183 PTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
             EA+ L + + LR  I P   + + + D
Sbjct: 274 SDEAIGLLNELNLRPDIAPQAFIYNPVID 302



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQ-LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI    +   + LF + + DR   PD+ ++N +I G C + ++ +A++L E++      P
Sbjct: 56  LIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSP 115

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDV 119
           +++T  IL+D  C+   +     +  ++   G    NVVT++ +I GY K+  ++ A  V
Sbjct: 116 DTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 175

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y +M  + I PN V+Y++LI+G  K G +  A+  +         PDVVT++ LI GYC+
Sbjct: 176 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 235

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+  +A++++  M ++ I P+    S +
Sbjct: 236 CGQLDDALRIWSDMAQHRIQPNVYTFSII 264



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 1/204 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+ ++  +   G+ P+ +TYN +I GY  +  L  AV++++++T ++  P+ +
Sbjct: 165 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 224

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA  ++S M +   + NV T+S +I    K      A  +  E+
Sbjct: 225 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 284

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P    Y+ +ID LCK G ++EA        +    PD  TY ILI GYC   R
Sbjct: 285 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 344

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLS 206
            +EA+  +  M+  G  PD + ++
Sbjct: 345 ISEAIMFFHEMVEAGCSPDSITVN 368



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFT 66
           LDA+  L  + ++ G   +   YN ++       R+ + V LFE+    ++  P+  +F 
Sbjct: 27  LDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFN 86

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I   C+ G++  A  +  +M E G   + VT++ L+DG  ++  +    +V   +  +
Sbjct: 87  VVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRD 146

Query: 127 NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN+V+++ +I G CK G +E+A+  ++  + + ++P+ VTY +LI GY K G    
Sbjct: 147 GVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGS 206

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++Y  M R    PD +  S+L D
Sbjct: 207 AVEVYQQMTRLRCPPDVVTFSSLID 231



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 1/179 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L +A++++ Q+T     PD++T++++I GYC   +LD+A++++  +   +++PN  TF+I
Sbjct: 204 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 263

Query: 68  LIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +I + CK+ R D+A  + +++ L          Y+ +ID   K   +  A  + + M E 
Sbjct: 264 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 323

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              P+  +Y+ILI G C +  + EA+  FH  ++    PD +T    I    KAG P E
Sbjct: 324 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 382



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITF 65
            LD AL+++  +    ++P++ T++ II   C  NR DEA+ L  +L     + P +  +
Sbjct: 238 QLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIY 297

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +ID  CK G++D+A ++   M EKG + +  TY+ LI GY     +  A   + EM E
Sbjct: 298 NPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 357

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
              SP+ ++ +  I  L K G+  E  +    A
Sbjct: 358 AGCSPDSITVNCFISCLLKAGMPNEVDHVMRLA 390



 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 37/76 (48%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A  +   + ++G  PD  TY  +I GYC  +R+ EA+  F ++      P
Sbjct: 303 VLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSP 362

Query: 61  NSITFTILIDAFCKEG 76
           +SIT    I    K G
Sbjct: 363 DSITVNCFISCLLKAG 378


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 119/216 (55%), Gaps = 9/216 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ LF  L  R + PD ITY+T++CG    +RLD A+ L +++    ++P+ + +  
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 68  LIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           L+    K G  +    ++ K++ + G + N+ TY+ ++DG  K    K   +V+E M  N
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P++++Y ILI GLC+ G ++ A   +   +   L+ D   Y  L++G+C+AGR  EA
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 187 MQLYDSM----LRN----GIMPDGLLLSTLADYNLQ 214
            + +DS     LRN     IM  GL  S + D  ++
Sbjct: 354 WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 115/201 (57%), Gaps = 1/201 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R + P++ TYN ++   C+   LD AV LF+ L   Q+ P+ IT++ L+    K+ R+D 
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDH 211

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILI 139
           A  +  +M   G + +VV Y+ L+ G FK+   +    V++++ ++    PN+ +Y++++
Sbjct: 212 ALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLCK G  +E    +   + N+L PDV+TY ILI G C++G    A ++Y  +++ G++
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331

Query: 200 PDGLLLSTLADYNLQSSGSQE 220
            D  + ++L     Q+   QE
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQE 352



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 1/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +F +    G + D+ +Y+++I G C++ RL +AV+++EK+     KPNS  +  L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  FC+  R  DA  ++SKM + G    V+TY+ LIDG  K++  + A  V  EM EN  
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P+I +Y  LI GL     +++AL  +   L   L  DV+ + ILI G C AG+  EA+ 
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600

Query: 189 LYDSMLRNGIMPDGLLL-STLAD 210
           ++  M      P  L+  +TL D
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMD 623



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 107/191 (56%), Gaps = 1/191 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++++ ++ D G  P +ITYNT+I G C   +  EA  +  ++      P+  T+  LI 
Sbjct: 493 AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIR 552

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NIS 129
               + ++DDA  ++ ++L KG K +V+ ++ LI G   +  +  A  V+ +M E  N  
Sbjct: 553 GLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PN+V+Y+ L+DGL + G +++A   +    ++ L PD+++Y   I+G C   R  E +QL
Sbjct: 613 PNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQL 672

Query: 190 YDSMLRNGIMP 200
            D +L  GI+P
Sbjct: 673 LDEVLSRGIIP 683



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 2/217 (0%)

Query: 8   LDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A++L+  L  D    PD +T+ T+I G C     ++A  +FE+      + +  +++
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYS 443

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  C  GR+ DA  ++ KM + G K N   Y+ LI G+ +      A  +Y +M +N
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADN 503

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SP +++Y+ LIDGLCK    +EA       ++N   PD+ TY  LIRG     +  +A
Sbjct: 504 GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDA 563

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           + ++  +L  G+  D +++  +  + L S+G  +  +
Sbjct: 564 LSIWKQILYKGLKVD-VMMHNILIHGLCSAGKVDEAL 599



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 114/209 (54%), Gaps = 3/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKP 60
           L K+  LD AL L  ++   G++PD++ YN ++ G       ++ +++++KL      +P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+ +++D  CK GR  +   ++ +M+    + +V+TY  LI G  +S ++  A  VY
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E+ +  +  +   Y+ L+ G C+ G ++EA + F  +     L ++ TY I+I+G   +
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA-WKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 181 GRPTEAMQLYDSMLRN-GIMPDGLLLSTL 208
           G   EA++L+D + ++   +PD +   TL
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTL 410



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 94/166 (56%), Gaps = 1/166 (0%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G  PDI TY ++I G  S  ++D+A+ +++++    LK + +   ILI   C  G
Sbjct: 534 EMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAG 593

Query: 77  RMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           ++D+A  +FS M EK     N+VTY+ L+DG +++  +  A  ++  + E+ + P+I+SY
Sbjct: 594 KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISY 653

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +  I GLC    + E +      L   ++P V+T+ IL+R   K G
Sbjct: 654 NTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQ 57
           L  +  +D AL ++ Q+  +GL+ D++ +N +I G CS  ++DEA+ +F    EK  C  
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC-- 611

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             PN +T+  L+D   + G +D A  +++ + E G + ++++Y+  I G      +    
Sbjct: 612 -PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGI 670

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            + +E+    I P +++++IL+  + K G ++
Sbjct: 671 QLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAF----HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +P I S++ L+D   +     +A   F    H A    + P++ TY I++R  C  G   
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A+ L+DS+ R  + PD +  STL
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTL 199


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L    KL   +  +G  P+ +TYNT+I G C   +LD+AV L E++   +  PN
Sbjct: 267 LCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+   K+ R  D   +   M E+G + N   YS LI G FK    + A  +++
Sbjct: 327 DVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWK 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    PNIV YS +IDGLC+ G   EA    +  + +  LP+V TY+ L++G+ K G
Sbjct: 387 KMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTG 446

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA+Q++  M   G   +    S L D
Sbjct: 447 LSEEAIQVWREMDETGCSRNEFCYSVLID 475



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 105/193 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+       +L   + +RG   +   Y+ +I G     + +EA+ L++K+     +PN
Sbjct: 337 LVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPN 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ +ID  C+EG+ ++A  + + M+  G   NV TYS L+ G+FK+   + A  V+ 
Sbjct: 397 IVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWR 456

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E   S N   YS+LIDGLC  G ++EA+  +   L   + PD V Y+ +I+G C  G
Sbjct: 457 EMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIG 516

Query: 182 RPTEAMQLYDSML 194
               A++LY  ML
Sbjct: 517 SMDAALKLYHEML 529



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A+ L+ ++ ++G  P+I+ Y+ +I G C   + +EA ++   +      PN
Sbjct: 372 LFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPN 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ L+  F K G  ++A  ++ +M E G   N   YS LIDG      +K A  V+ 
Sbjct: 432 VYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWS 491

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH---CALDNHLLPDVVTYAILIRGYC 178
           +M    I P+ V+YS +I GLC  G M+ AL  +H   C  +    PDVVTY IL+ G C
Sbjct: 492 KMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
                + A+ L + ML  G  PD +  +T  +   + S S E 
Sbjct: 552 MQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEE 594



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A+ L  ++   G  P  + YN +I G C    L    +L + +      PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPN 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C +G++D A  +  +M+      N VTY  LI+G  K +       +  
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E     N   YS+LI GL K G  EEA+  +    +    P++V Y+ +I G C+ G
Sbjct: 352 SMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +P EA ++ + M+ +G +P+    S+L     ++  S+E
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEE 450



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 92/175 (52%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + P+ +++N +I   C L  +D A+++F  +   +  P+  T+  L+D  CKE R+D+A 
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           ++  +M  +G   + V Y+ LIDG  K  ++     + + M      PN V+Y+ LI GL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGL 302

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           C +G +++A+      + +  +P+ VTY  LI G  K  R  +  +L  SM   G
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERG 357



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 80/155 (51%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
           + + PN ++F ++I A CK G +D A  +F  M EK    +  TY  L+DG  K + +  
Sbjct: 181 MNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE 240

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  + +EM     SP+ V Y++LIDGLCK+G +                P+ VTY  LI 
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G C  G+  +A+ L + M+ +  +P+ +   TL +
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 101/204 (49%), Gaps = 24/204 (11%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A++++ ++ + G   +   Y+ +I G C + R+ EA+ ++ K+  + +KP+++ ++ +
Sbjct: 449 EEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSM 508

Query: 69  IDAFCKEGRMDDATMMFSKML-EKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           I   C  G MD A  ++ +ML ++ PK+  +VVTY+ L+DG    +++  A D+   M +
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLD 568

Query: 126 NNISPNIVSYSILIDGLCK--------RGLMEE-------------ALYAFHCALDNHLL 164
               P++++ +  ++ L +        R  +EE             A       L  +L 
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLA 628

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQ 188
           P   T+A+++   CK  +   A+ 
Sbjct: 629 PKTSTWAMIVPEICKPKKINAAIN 652



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 5/187 (2%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           T +++I  Y +L       +L  ++          +F ++  A+ K    + A  +F +M
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138

Query: 89  LEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN----ISPNIVSYSILIDGLC 143
           +++   K +V +++ +++            + Y+ +  +N    ISPN +S++++I  LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G ++ A+  F    +   LPD  TY  L+ G CK  R  EA+ L D M   G  P  +
Sbjct: 199 KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 204 LLSTLAD 210
           + + L D
Sbjct: 259 IYNVLID 265


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 10/217 (4%)

Query: 2   LIKECHLDAALKLFGQ-LTDRGL-----EPDIITYNTIICGYCSLNRLDEAVQLFEKLTC 55
           L +  ++  ALKL  + L D  L     +P +I+Y+ II   C   R DEA  LFE++  
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
             + P  I++T LI  FC  G+ ++A  +F++M+ +G + NVVT++ LID   K   +  
Sbjct: 271 QGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+ E M +  I PN+++Y+ LI+G C  G +  A   F         PDV+ Y +LI 
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPD----GLLLSTL 208
           GYCK  +  EAM+LY+ ML+ G  PD    G LL+ L
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 427



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 117/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   D A  LF ++  +G+ P +I+Y ++I G+C   + +EA +LF ++    ++PN
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +LID  CKEG++ +A  +   M+++G   N++TY+ LI+G+    ++ SA +++ 
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P+++ Y++LI+G CK   +EEA+  ++  L     PDV TY  L+ G  + G
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 431

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A +L+  M   GI  D
Sbjct: 432 KVGDAKKLFGVMKVYGIPGD 451



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +LF  +  +G EPD+I Y  +I GYC  ++++EA++L+  +  V  +P+  T+  
Sbjct: 363 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 422

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+    + G++ DA  +F  M   G   ++  Y   ++G  K+  +  A +++ ++   N
Sbjct: 423 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 482

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  +I  ++ LIDGLCK G +E A   F       L PDVVTY I+I  +C+ G+  +A 
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 542

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M +NG  PD +  +TL
Sbjct: 543 ILFQKMEKNGCTPDKITYATL 563



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 118/222 (53%), Gaps = 6/222 (2%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK------LTCVQL 58
           E  +  A  LF ++   G  P+ ITY T++ G C    +  A++L ++      L  +  
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINF 238

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           KP  I+++I+IDA CK+ R D+A  +F +M  +G    V++Y+ LI G+      + A  
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++ EM    + PN+V++++LID LCK G + EA       +   ++P+++TY  LI G+C
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             G    A +L+ SM   G  PD +  + L +   ++S  +E
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEE 400



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 6/215 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H      L+ Q+   G+ PD  T N ++   C++NR+ E + +   +      P+
Sbjct: 106 LAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPD 165

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI   C E R+  A ++F++M + G   N +TY  L+ G  ++ N+  A  +++
Sbjct: 166 IVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQ 225

Query: 122 EMCEN------NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           EM  +      N  P ++SYSI+ID LCK    +EA   F       + P V++Y  LI 
Sbjct: 226 EMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIH 285

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+C  G+  EA +L++ M+  G+ P+ +  + L D
Sbjct: 286 GFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 76/122 (62%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF +L    ++ DI  +N +I G C   +L+ A +LFEKL   +L+P+ +T+ I+I 
Sbjct: 471 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 530

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+ G++  A ++F KM + G   + +TY+ LI G+F+S+ ++   ++   M + ++S 
Sbjct: 531 EFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSL 590

Query: 131 NI 132
           ++
Sbjct: 591 DV 592



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 2/138 (1%)

Query: 73  CKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           CK G +    A   F  M+   P   + +++ L+ G  K ++    F +Y +M  + ISP
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  + +IL++ LC    + E L      L    +PD+VTY  LI+G C   R ++A  L+
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G  P+ +   TL
Sbjct: 190 TRMQKLGCTPNAITYGTL 207



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 64/152 (42%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           +A Q F  +      P   +FT L+    K         ++++M   G   +  T + L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           +       +     V   +      P+IV+Y+ LI GLC    + +A   F         
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           P+ +TY  L++G C+ G  + A++L+  ML +
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLND 230


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 114/210 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  K   L  ALK F  +    L P+++T+  +I GYC    L+  V L+E++  V++  
Sbjct: 172 MFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSL 231

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+T LID FCK+G M  A  M+ +MLE   + N + Y+ +I+G+F+  +  +A    
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFL 291

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M    +  +I +Y ++I GLC  G ++EA           L+PD++ +  ++  Y K+
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKS 351

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR   A+ +Y  ++  G  PD + LST+ D
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMID 381



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 105/191 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++TY+T I  +C    L  A++ F  +    L PN +TFT LID +CK G ++    +
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + +M       NVVTY+ LIDG+ K   M+ A  +Y  M E+ + PN + Y+ +I+G  +
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQ 280

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           RG  + A+      L+  +  D+  Y ++I G C  G+  EA ++ + M +  ++PD ++
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMI 340

Query: 205 LSTLADYNLQS 215
            +T+ +   +S
Sbjct: 341 FTTMMNAYFKS 351



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 6/209 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+K   ++ ++G+  DI  Y  II G C + +L EA ++ E +    L P+ + FT +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTM 344

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++A+ K GRM  A  M+ K++E+G + +VV  S +IDG  K+  +  A   +   C    
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF---CTEK- 400

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             N V Y++LID LCK     E    F    +  L+PD   Y   I G CK G   +A +
Sbjct: 401 -ANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           L   M++ G+  D    +TL  Y L S G
Sbjct: 460 LKTKMVQEGLELDLFAYTTLI-YGLTSKG 487



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 5/196 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K   + AA+ ++ +L +RG EPD++  +T+I G     +L EA+  F    C + K N 
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF----CTE-KAND 403

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T+LIDA CKE    +   +FSK+ E G   +   Y+  I G  K  N+  AF +  +
Sbjct: 404 VMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTK 463

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  +  ++ +Y+ LI GL  +GLM EA   F   L + + PD   + +LIR Y K G 
Sbjct: 464 MVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGN 523

Query: 183 PTEAMQLYDSMLRNGI 198
            T A  L   M   G+
Sbjct: 524 MTTASDLLLDMQTRGL 539



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 10/203 (4%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------TCVQLKPNSITFTILIDAFCKE 75
           G EPD+I+YN++I G+C    +  A  + E L      TC   KP+ ++F  L + F K 
Sbjct: 86  GCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTC---KPDIVSFNTLFNGFSKM 142

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
             +D+  +    ML K    NVVTYS  ID + KS  +K A   +  M  + + PN+V++
Sbjct: 143 KMLDEVFVYMGVML-KCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTF 201

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           + LIDG CK G +E  +  +       +  +VVTY  LI G+CK G    A  +Y  ML 
Sbjct: 202 TCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLE 261

Query: 196 NGIMPDGLLLSTLADYNLQSSGS 218
           + + P+ L+ +T+ +   Q   S
Sbjct: 262 DRVEPNSLVYTTIINGFFQRGDS 284



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 4/188 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +LK    L  RG  P   ++N+++   C L ++  AV +   +     +P+ I++  LID
Sbjct: 40  SLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLID 99

Query: 71  AFCKEGRMDDATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
             C+ G +  A ++   +        K ++V+++ L +G+ K + +   F VY  +    
Sbjct: 100 GHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVF-VYMGVMLKC 158

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+V+YS  ID  CK G ++ AL +F+C   + L P+VVT+  LI GYCKAG     +
Sbjct: 159 CSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVV 218

Query: 188 QLYDSMLR 195
            LY+ M R
Sbjct: 219 SLYEEMRR 226



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 40/239 (16%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+  + L+ ++    +  +++TY  +I G+C    +  A  ++ ++   +++PNS+
Sbjct: 210 KAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSL 269

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG----------------- 106
            +T +I+ F + G  D+A    +KML +G + ++  Y  +I G                 
Sbjct: 270 VYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDM 329

Query: 107 ------------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                             YFKS  MK+A ++Y ++ E    P++V+ S +IDG+ K G +
Sbjct: 330 EKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
            EA+  F     N      V Y +LI   CK     E  +L+  +   G++PD  + ++
Sbjct: 390 HEAISYFCTEKAND-----VMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTS 443



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE       +LF ++++ GL PD   Y + I G C    L +A +L  K+    L+ +
Sbjct: 413 LCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELD 472

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T LI     +G M +A  +F +ML  G   +   +  LI  Y K  NM +A D+  
Sbjct: 473 LFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLL 532

Query: 122 EM 123
           +M
Sbjct: 533 DM 534



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +L  A KL  ++   GLE D+  Y T+I G  S   + EA Q+F+++    + P+
Sbjct: 448 LCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPD 507

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           S  F +LI A+ KEG M  A+ +   M  +G    V    C
Sbjct: 508 SAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLARAVSDADC 548


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 115/198 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L+ ++  + + PD++TYNT+I G+C + +L++A++LF ++    + PN  +F ILID
Sbjct: 120 AYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILID 179

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKEG +     + + M+++  K +VVT S LIDGYF  +    A  ++  M +N ++ 
Sbjct: 180 GLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTI 239

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ SY+I+I+GL K  +++EA+  F       + PD +TY+ LI G  K GR +    L 
Sbjct: 240 DLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLI 299

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M   G   + +  S+L
Sbjct: 300 DEMRATGRSANVITYSSL 317



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 98/178 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +F  +   G+  D+ +YN +I G      +DEAV LF+++    + P++IT++ L
Sbjct: 223 NKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTL 282

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID   K GR+     +  +M   G  ANV+TYS L++   KS +  +A  ++ ++ +   
Sbjct: 283 IDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGF 342

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            PN+V+Y+IL+DGLCK G +++A   FH  L      DV  Y ++I G C+     EA
Sbjct: 343 EPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA 400



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 9/178 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ LF ++  + + PD ITY+T+I G   L R+     L +++       N
Sbjct: 251 LSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSAN 310

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L++  CK G  D A  +F+K+ +KG + N+VTY+ L+DG  K+  +K A +++ 
Sbjct: 311 VITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFH 370

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++       ++  Y+++I+GLC+  L +E   A+ C       P+ VTY I+IR   K
Sbjct: 371 DLLIKGYRLDVRLYTVMINGLCREALFDE---AYGCT------PNAVTYEIIIRALFK 419



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +  + ++PD++T +++I GY  + + ++A  +F  +    +  +
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID 240

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ I+I+   K   +D+A ++F +M  K    + +TYS LIDG  K   +   +D+ +
Sbjct: 241 LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLID 300

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     S N+++YS L++ LCK G  + A+  F    D    P++VTY IL+ G CK G
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNG 360

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A +++  +L  G   D  L + + +
Sbjct: 361 RLKDAQEIFHDLLIKGYRLDVRLYTVMIN 389



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 27/233 (11%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           C L+ A  +  ++   G +PD +T  T++ G C  N + +A+   + +     + +++++
Sbjct: 24  CQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSY 83

Query: 66  TILIDAFCKEGRMD---------------------DATMMFSKMLEKGPKANVVTYSCLI 104
             LI+  CK G                        DA  ++ +M+ K    +VVTY+ LI
Sbjct: 84  GTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLI 143

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G+     ++ A  ++ EM   NI PN+ S++ILIDGLCK G ++         +   + 
Sbjct: 144 YGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVK 203

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           PDVVT + LI GY    +  +A  ++++M +NG+  D      L  YN+  +G
Sbjct: 204 PDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID------LRSYNIMING 250



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 96/186 (51%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD   Y+ II   C    + +A  L+ ++   ++ P+ +T+  LI  FC  G+++DA  +
Sbjct: 99  PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F++M  K    NV +++ LIDG  K  ++K    V   M + ++ P++V+ S LIDG   
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
                +A Y F+    N +  D+ +Y I+I G  KA    EA+ L+  M    + PD + 
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278

Query: 205 LSTLAD 210
            STL D
Sbjct: 279 YSTLID 284



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 16/191 (8%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RG++ DII  + +I  +  L +L+ A  +  K+  +  +P+++T T L+   C    +  
Sbjct: 4   RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A      ++ KG + + V+Y  LI+G  KS   K+              P+   YS++I+
Sbjct: 64  ALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------PDQFMYSMIIN 109

Query: 141 GLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            LCK  L+ +A Y  +C +    + PDVVTY  LI G+C  G+  +A++L++ M    I+
Sbjct: 110 RLCKDKLVVDA-YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIV 168

Query: 200 PDGLLLSTLAD 210
           P+    + L D
Sbjct: 169 PNVCSFNILID 179



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 9/114 (7%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K  H D A+++F ++ D+G EP+++TYN ++ G C   RL +A ++F  L     + 
Sbjct: 320 VLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRL 379

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           +   +T++I+  C+E   D+A          G   N VTY  +I   FK+   K
Sbjct: 380 DVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIIIRALFKNDKNK 424


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 14/213 (6%)

Query: 6   CHLD-----AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           CHL+      AL LF ++   G  PD++TY T+I G C +     A++L   +     +P
Sbjct: 107 CHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQP 166

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   +  +ID+ CK+ ++ +A  +FS+M+ KG   ++ TY+ LI         K    + 
Sbjct: 167 NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL 226

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL-----LPDVVTYAILIR 175
            EM ++ I P++VS++ ++D LCK G + EA    H  +D  +     +P+V++Y  LI 
Sbjct: 227 NEMVDSKIMPDVVSFNTVVDALCKEGKVTEA----HDVVDKMIQRGGCMPNVISYNTLIN 282

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYCK  R  +AM L+  M R  ++PD +  STL
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315



 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 115/201 (57%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF ++  +G+ PDI TYN++I   C+L        L  ++   ++ P+
Sbjct: 178 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 237

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            ++F  ++DA CKEG++ +A  +  KM+++G    NV++Y+ LI+GY K Q +  A  ++
Sbjct: 238 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLF 297

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EMC   + P+ V+YS LI GLC    +++A+  FH  +    +P++VTY IL+   CK 
Sbjct: 298 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 357

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
               EAM L  ++  + + PD
Sbjct: 358 RYLAEAMALLKAIEGSNLDPD 378



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L KE  +  A  +  ++  RG   P++I+YNT+I GYC + R+D+A+ LF ++   +L P
Sbjct: 248 LCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 307

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++T++ LI   C   R+ DA  +F +M+      N+VTY  L+D   K++ +  A  + 
Sbjct: 308 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 367

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + +  +N+ P+I   +I IDG+C+ G +E A   F       L PDV TY+I+I G C+ 
Sbjct: 368 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 427

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           G   EA +L+  M  NG   +G + +T+ 
Sbjct: 428 GLLDEASKLFREMDENGCTLNGCIYNTIT 456



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 3/207 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--LDEAVQLFEKLTCVQLKPNSIT 64
           H    L L  Q+   G+ P+I T + +I  +C LNR  + EA+ LF+K+     +P+ +T
Sbjct: 76  HHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVT 135

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI+  CK G    A  +   M++K  + NV  Y+ +ID   K + +  AF+++ EM 
Sbjct: 136 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 195

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              ISP+I +Y+ LI  LC     +      +  +D+ ++PDVV++  ++   CK G+ T
Sbjct: 196 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 255

Query: 185 EAMQLYDSML-RNGIMPDGLLLSTLAD 210
           EA  + D M+ R G MP+ +  +TL +
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLIN 282



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LFG++  + L PD +TY+T+I G C + RL +A+ LF ++      PN +T+ I
Sbjct: 290 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 349

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK   + +A  +   +       ++   +  IDG  ++  +++A D++  +    
Sbjct: 350 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 409

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +YSI+I+GLC+RGL++EA   F    +N    +   Y  + RG+ +    + A+
Sbjct: 410 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 469

Query: 188 QLYDSMLRNGIMPDG----LLLSTLADYNLQSSGSQ 219
           QL   M+  G   D     L +  L+D  L  S  Q
Sbjct: 470 QLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 505



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+  F ++      P  + +N ++     +      + L  ++    + PN  T  I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 68  LIDAFC--KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           LI++FC    G++ +A  +F KM+ +G + +VVTY  LI+G  K  N  +A  +   M +
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            N  PN+ +Y+ +ID LCK   + EA   F   +   + PD+ TY  LI   C       
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
              L + M+ + IMPD +  +T+ D
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVD 246



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A+ L   +    L+PDI   N  I G C    L+ A  LF  L+   L+P+
Sbjct: 354 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 413

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I+  C+ G +D+A+ +F +M E G   N   Y+ +  G+ ++     A  + +
Sbjct: 414 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 473

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S +  + ++ +  L   GL
Sbjct: 474 EMVARGFSADASTMTLFVKMLSDDGL 499


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 105/181 (58%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G+ PD +TYN II G C    L +A  L  K+    L+P+ IT+T LI A C+ G + +
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  + + M+  G + +VVTY+ LI    +  N+ SA+  + +M +  I PN ++Y++LI 
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LC+ G    A + FH  L+  L P+  TY +LI G C+ G   +A++LY  M +NGI P
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697

Query: 201 D 201
           D
Sbjct: 698 D 698



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 108/206 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  A + F ++  +GL+PD   YNT IC    L    +A QL E +    + P+++T+ 
Sbjct: 469 NLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYN 528

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK G + DA  +  KM+  G + + +TY+CLI  + +   +  A  +   M  +
Sbjct: 529 VIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSD 588

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ILI   C+RG +  A   F   LD  + P+ +TY +LI   C+ GR   A
Sbjct: 589 GLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLA 648

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYN 212
              +  ML  G+ P+    + L D N
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGN 674



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 35/234 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++AA   F ++   GL PD+ITYN+++ GYC    L EA+ L   L    L P 
Sbjct: 359 LLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPT 418

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID +C+ G +++A  +  +M+E+G   +V TY+ L++G  K +N+  A + ++
Sbjct: 419 VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 122 EMCE-----------------------------------NNISPNIVSYSILIDGLCKRG 146
           EM                                       I P+ V+Y+++IDGLCK G
Sbjct: 479 EMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            +++A       + + L PD +TY  LI  +C+ G  +EA +L + M+ +G+ P
Sbjct: 539 NLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQP 592



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL L G L   GL P ++TYNT+I GYC L  L+EA +L E++      P+  
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC 455

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN--------------------------- 96
           T+TIL++   K   +  A   F +ML KG + +                           
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM 515

Query: 97  --------VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                    VTY+ +IDG  K+ N+K A D+  +M  + + P+ ++Y+ LI   C+RGL+
Sbjct: 516 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLL 575

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA    +  + + L P VVTY ILI   C+ G    A   +  ML  GI P+ +  + L
Sbjct: 576 SEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 94/179 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A  L  ++   GL+PD ITY  +I  +C    L EA +L   +    L+P+
Sbjct: 534 LCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPS 593

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TILI   C+ G +  A   F KML+ G + N +TY+ LI    ++     A+  + 
Sbjct: 594 VVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFH 653

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E  ++PN  +Y++LIDG C+ G   +A+  +     N + PD  T+  L +G+ K 
Sbjct: 654 EMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKG 712



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 9/217 (4%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-----CVQLKPNSI 63
           D    ++ ++    +EP I+TYNT++  +    R DEA  L +++      C+    N +
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLL---NDV 281

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ++I    +EG +++A  +   M     KA+  TY+ LI    +   ++    +  EM
Sbjct: 282 TYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEM 340

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P +V+Y+ +I GL K   +E A   F       LLPD++TY  ++ GYCKAG  
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA+ L   + R G+ P  L  +TL D   +  G +E
Sbjct: 401 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEE 437



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 35/220 (15%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ + G+ P ++TYN II G     +++ A   F ++  + L P+ IT+  +++ +CK G
Sbjct: 339 EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAG 398

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            + +A  +   +   G    V+TY+ LIDGY +   ++ A  + EEM E    P++ +Y+
Sbjct: 399 NLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYT 458

Query: 137 ILIDGLCK-------RGLMEEAL--------YAFHCAL-------DNH------------ 162
           IL++G  K       R   +E L        +A++  +       D H            
Sbjct: 459 ILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLK 518

Query: 163 -LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            + PD VTY ++I G CK G   +A  L   M+ +G+ PD
Sbjct: 519 GIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPD 558



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 5/203 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
            +KE   D A  L  ++  +G   L  D+ TYN +I        L+ A +L + +   + 
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDV-TYNVVISFLAREGHLENAAKLVDSMRLSK- 310

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           K +S T+  LI A  + G +     +  +M  +G    +VTY+ +I G  KS+ +++A  
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            + EM    + P++++Y+ +++G CK G ++EAL+         L P V+TY  LI GYC
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           + G   EA +L + M+  G  PD
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPD 453


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KL  ++ ++G +PD++TYN +I G C   RLDEA++    +     +PN I
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++ + C  GR  DA  + S ML KG   +VVT++ LI+   +   +  A D+ E+M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  +PN +SY+ L+ G CK   M+ A+      +     PD+VTY  L+   CK G+ 
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A+++ + +   G  P  +  +T+ D  L   G  E  I
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVID-GLSKVGKTERAI 424



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM   G   N ++Y+ L+ G+ K + M  A +  + M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ L+  LCK G ++ A+   +        P ++TY  +I G  K G+ 
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A++L D M R G+ PD +  S+L    L   G  +  I
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVS-GLSREGKVDEAI 459



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+   K    +  RG  PDII   ++I G+C + +  +A  + E L      P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +LI  +CK G +D+A  +  +M       +VVTY+ ++     S  +K A +V +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              +    P++++Y+ILI+  CK   + +A+       +    PDVVTY +LI G CK G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++  ++M   G  P+
Sbjct: 244 RLDEAIKFLNNMPSYGCQPN 263



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +G  P ++T+N +I   C    L  A+ + EK+      PNS+++  L+ 
Sbjct: 283 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCKE +MD A      M+ +G   ++VTY+ L+    K   +  A ++  ++     SP
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G  E A+          L PD++TY+ L+ G  + G+  EA++ +
Sbjct: 403 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462

Query: 191 DSMLRNGIMPDGLLLSTL 208
             +   GI P+ +  +++
Sbjct: 463 HDLEGLGIRPNAITYNSI 480



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL++  ++    + PD++TYNTI+   C   +L +A+++ ++    +  P+ I
Sbjct: 139 KSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+A CKE  +  A  +  +M  KG K +VVTY+ LI+G  K   +  A      M
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+ G  
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 315

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ + + M  +G  P+ L
Sbjct: 316 GRAIDILEKMPMHGCTPNSL 335



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A++    +  RG  PDI+TYNT++   C   ++D AV++  +L+     P  I
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+ + A  +  +M  KG K +++TYS L+ G  +   +  A   + ++
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN ++Y+ ++ GLCK    + A+      +     P   TY ILI G    G  
Sbjct: 466 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 525

Query: 184 TEAMQLYDSMLRNGIM 199
            EA+ L + +   G++
Sbjct: 526 KEALDLLNELCSRGLV 541



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 106/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+ +  ++   G  P+ ++YN ++ G+C   ++D A++  + +      P+
Sbjct: 309 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 368

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+ A CK+G++D A  + +++  KG    ++TY+ +IDG  K    + A  + +
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+I++YS L+ GL + G ++EA+  FH      + P+ +TY  ++ G CK+ 
Sbjct: 429 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 488

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A+     M+     P
Sbjct: 489 QTDRAIDFLAYMISKRCKP 507



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 86/151 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+++  QL+ +G  P +ITYNT+I G   + + + A++L +++    LKP+
Sbjct: 379 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L+    +EG++D+A   F  +   G + N +TY+ ++ G  KS+    A D   
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 498

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M      P   +Y+ILI+G+   GL +EAL
Sbjct: 499 YMISKRCKPTEATYTILIEGIAYEGLAKEAL 529



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 5/147 (3%)

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             + G ++D       M+ +G   +++  + LI G+ +    K A  V E + ++   P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +++Y++LI G CK G ++ AL      LD  ++ PDVVTY  ++R  C +G+  +AM++ 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQV----LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           D  L+    PD +  + L +   + SG
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESG 209



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +D A+K F  L   G+ P+ ITYN+I+ G C   + D A+     +   + KP 
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 508

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI+    EG   +A  + +++  +G
Sbjct: 509 EATYTILIEGIAYEGLAKEALDLLNELCSRG 539


>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 544

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 121/205 (59%), Gaps = 3/205 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK--LTCVQLKPNSITF 65
           +D A +L G +   G  PDI+TYN ++ G C ++++D A  L E+  L C +  PN +++
Sbjct: 229 VDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKC-EFAPNVVSY 287

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I  +C+  +MD+A+ +F +M+  G K NV T+S L+DG+ K+ +M SA  +++++  
Sbjct: 288 TTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILF 347

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +  +PN+++ + LI+G C+ G +   L  +      ++  ++ TY++LI   CK+ R  E
Sbjct: 348 HGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQE 407

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A  L   + ++ I+P   + + + D
Sbjct: 408 ARNLLRILKQSDIVPLAFVYNPVID 432



 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 34/225 (15%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P++++Y T+I GYC L+++DEA  LF ++     KPN  TF+ L+D F K G M  A  M
Sbjct: 282 PNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGM 341

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             K+L  G   NV+T + LI+GY ++  +    D++ EM   NI  N+ +YS+LI  LCK
Sbjct: 342 HKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCK 401

Query: 145 RGLMEEA---------------LYAFHCALDNH-------------------LLPDVVTY 170
              ++EA                + ++  +D +                     PD +T+
Sbjct: 402 SNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKCKPDKLTF 461

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            ILI G+C  GR  EA+ ++  ML +G  PD + + TL+   L+S
Sbjct: 462 TILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKS 506



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 1/195 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   + +AL +  ++   G  P++IT  ++I GYC    ++  + L+ ++    +  N
Sbjct: 329 FVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPAN 388

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+++LI A CK  R+ +A  +   + +         Y+ +IDGY KS N+  A  +  
Sbjct: 389 LYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVA 448

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+ ++++ILI G C +G   EA+  F+  L +   PD +T   L     K+G
Sbjct: 449 EM-EEKCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSG 507

Query: 182 RPTEAMQLYDSMLRN 196
            P EA ++ +++  N
Sbjct: 508 MPGEAARIKETLFEN 522



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 13/209 (6%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           ++A  L+  +   G  PD      ++  +   +R D + +L  +  C  ++ + I +   
Sbjct: 125 NSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNF 184

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++   K  R+DDA  +F +++      +  T++ LI G   + ++  AF++  +M     
Sbjct: 185 LNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGC 244

Query: 129 SPNIVSYSILIDGLCK-------RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           SP+IV+Y+IL+ GLC+       R L+EE        L     P+VV+Y  +I GYC+  
Sbjct: 245 SPDIVTYNILLHGLCRIDQVDRARDLLEEV------CLKCEFAPNVVSYTTVISGYCRLS 298

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L+  M+R+G  P+    S L D
Sbjct: 299 KMDEASSLFYEMVRSGTKPNVFTFSALVD 327



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 1/128 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  L   L    + P    YN +I GYC    +DEA  +  ++   + KP+
Sbjct: 399 LCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEME-EKCKPD 457

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFTILI   C +GR  +A  +F KML  G   + +T   L     KS     A  + E
Sbjct: 458 KLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKE 517

Query: 122 EMCENNIS 129
            + EN  S
Sbjct: 518 TLFENQES 525



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+ + C+ G  + A +++  M   G   +    S L+     S  +   FDV +E+
Sbjct: 110 TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPD----SRLLGFLVSSFALADRFDVSKEL 165

Query: 124 CE----NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
                 + +  +++ Y+  ++ L K   +++A+  F   + +H   D  T+ ILIRG C 
Sbjct: 166 LAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCT 225

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
           AG   EA +L   M   G  PD
Sbjct: 226 AGDVDEAFELLGDMGSFGCSPD 247



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD----GLLLSTLA 209
           TY +L+R  C+AG    A  LYDSM  +G +PD    G L+S+ A
Sbjct: 110 TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFA 154


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A  L  +++  GL P+++ Y+T+I G+      DEA ++ ++++   ++PN
Sbjct: 323 LCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPN 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK GRM  A+ +  +M + G  A+ +TY+ +I+G+ +  N + AF +  
Sbjct: 383 KITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLN 442

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ISPN+ +YSI+I+GLC+ G  E A       + + L P+   YA LI GYC+ G
Sbjct: 443 EMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREG 502

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             + A +    M R  + PD
Sbjct: 503 SFSLACETLKKMTRENLTPD 522



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 100/194 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A K+  ++ + G   +++TYNT+I G C    ++EA    +++    L P+  T+  
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR D A  +  +M   G   NVV YS LIDG+ +  N   AF + +EM    
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN ++Y  LI GLCK G M  A            + D +TY ++I G+ +     EA 
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438

Query: 188 QLYDSMLRNGIMPD 201
            L + M + GI P+
Sbjct: 439 LLLNEMRKGGISPN 452



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 104/187 (55%), Gaps = 1/187 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A+ L  ++  +G+EP I  YN +I G+C  + +  A  +F  + C  L PN +
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID +CK G + DA  ++++ML +G   +   YS L  G   S +++ A  + EEM
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                +  I S++ L+ G CKRG ++E +   H  +D  ++P ++T   ++ G  +AG+ 
Sbjct: 795 IARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 184 TEAMQLY 190
           +EA  ++
Sbjct: 854 SEAHTIF 860



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 101/197 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E     A +   ++T   L PD+  YN++I G  ++ ++DEA++ ++++     +PN  
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +   G ++ A  +  +ML  G   N   Y+ +++GYFKS N++      + M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+   Y I+I  L   G M+ A+        N L+PD + Y  LI G+CKA   
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A+ L D M + GI P
Sbjct: 680 EKAVGLLDEMAKKGIEP 696



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 104/203 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ A +L  Q+ + GL P+   Y  I+ GY   + L++     + +    L P++  + 
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYG 632

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I      G M  A  + S + + G   + + Y  LI G+ K+ +M+ A  + +EM + 
Sbjct: 633 IVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P I  Y+ LIDG CK   +  A   F+  +   L P+ VTY  LI GYCKAG   +A
Sbjct: 693 GIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDA 752

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
           + LY+ ML  G+ PD  + S LA
Sbjct: 753 IDLYNEMLTEGVAPDAFVYSVLA 775



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 6/227 (2%)

Query: 2   LIKECHL-----DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           L+ E HL     + A  L  ++   G+ P++ TY+ II G C +   + A  L E++   
Sbjct: 423 LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIAD 482

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            LKPN+  +  LI  +C+EG    A     KM  +    ++  Y+ LI G      M  A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            + Y+EM E    PN  +Y  LI G    G +E+A    H  L++ L P+   YA ++ G
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           Y K+    +      SML  G+MPD  L   +  +NL SSG  +  +
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVI-HNLSSSGHMQAAV 648



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 4/219 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+ AA+ +   +   GL PD + Y ++I G+C    +++AV L +++    ++P    + 
Sbjct: 643 HMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYN 702

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID FCK   +  A  +F+ ++ KG   N VTY+ LIDGY K+ +++ A D+Y EM   
Sbjct: 703 ALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE 762

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P+   YS+L  G    G +++AL+     +       + ++  L+ G+CK G+  E 
Sbjct: 763 GVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQET 821

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG--SQEHCI 223
           ++    M+   I+P  L +  +    L  +G  S+ H I
Sbjct: 822 VKFLHVMMDKDIVPSLLTVENIV-IGLGEAGKLSEAHTI 859



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +++ + D A K+  +++  G++P+ ITY+ +I G C L R+  A ++ +++T +    +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+ ++I+   ++   ++A ++ ++M + G   NV TYS +I+G  +    + A  + E
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + + PN   Y+ LI G C+ G    A          +L PD+  Y  LI G    G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA++ YD ML  G  P+
Sbjct: 538 KMDEAIEYYDEMLEKGFQPN 557



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 110/214 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++  Q+T  G   D +TYN +I G+   +  +EA  L  ++    + PN
Sbjct: 393 LCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPN 452

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I+I+  C+ G  + A+ +  +M+  G K N   Y+ LI GY +  +   A +  +
Sbjct: 453 VYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLK 512

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   N++P++  Y+ LI GL   G M+EA+  +   L+    P+  TY  LI GY  AG
Sbjct: 513 KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
              +A QL   ML +G+ P+  + + + +   +S
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKS 606



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 104/208 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+ G +   G+ PD+ TY+T+I  YC +  L+ A ++ E++       N +T+  LI   
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C+ G +++A     +M + G   +  TY  +I+G  K      A  + +EM    + PN+
Sbjct: 289 CRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV 348

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V YS LIDG  ++G  +EA           + P+ +TY  LIRG CK GR   A ++   
Sbjct: 349 VVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           M + G M D +  + + + +L+    +E
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEE 436



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 97/194 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L+        + ++GL PD   Y  +I    S   +  AV +   +    L P+S+
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI  FCK   M+ A  +  +M +KG +  +  Y+ LIDG+ KS ++  A +++  +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI 724

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN V+Y+ LIDG CK G + +A+  ++  L   + PD   Y++L  G   +G  
Sbjct: 725 ICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDL 784

Query: 184 TEAMQLYDSMLRNG 197
            +A+ + + M+  G
Sbjct: 785 QQALFITEEMIARG 798



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 35/193 (18%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLE-------------------------------- 90
           +   +L+D + K GR+ D   +   M +                                
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 91  ---KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
               G   +V TYS LI+ Y K ++++SA  V EEM E   S N+V+Y+ LI GLC+ G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +EEA        D  L+PD  TY  +I G CK GRP +A  L D M   G+MP+ ++ ST
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 208 LADYNLQSSGSQE 220
           L D  ++   + E
Sbjct: 354 LIDGFMRQGNADE 366



 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 18/152 (11%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL +  ++  RG    I ++NT++ G+C   +L E V+    +    + P+ +T   
Sbjct: 784 LQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVEN 842

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    + G++ +A  +F ++ +K               +  + ++ S F    +M    
Sbjct: 843 IVIGLGEAGKLSEAHTIFVELQQKNAS------------HRDTDHLSSLF---TDMINQG 887

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           + P  V ++ +I   CK+G +++AL   H AL
Sbjct: 888 LVPLDVIHN-MIQSHCKQGYLDKALM-LHDAL 917


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 108/184 (58%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ ITYNT+I G+    +++ A ++F++++   L PNSIT+  LI   C  G + +A  +
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M+  G + N VTY  L++G +K+        + E M    +  + +SY+ +IDGLCK
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCK 397

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G++EEA+      L   + PDVVT+++LI G+ + G+   A ++   M + G++P+G+L
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457

Query: 205 LSTL 208
            STL
Sbjct: 458 YSTL 461



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 7/222 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  +D     F  +  +G+ PD+ T+N ++   C   +   A  L  K+    + P 
Sbjct: 150 LVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPT 209

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L++ +CK+GR   A+ +   M  KG   +V TY+  ID   +       + + +
Sbjct: 210 AVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLK 269

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N + PN ++Y+ LI G  + G +E A   F      +LLP+ +TY  LI G+C  G
Sbjct: 270 RMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTG 329

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTL---ADYNLQSS 216
              EA++L D M+ +G+ P+    G LL+ L   A++ + SS
Sbjct: 330 NIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSS 371



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 117/214 (54%), Gaps = 4/214 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  ++ A K+F +++   L P+ ITYNT+I G+C+   + EA++L + +    L+PN
Sbjct: 290 FVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPN 349

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L++   K       + +  +M   G + + ++Y+ +IDG  K+  ++ A  + +
Sbjct: 350 EVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLD 409

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M + +++P++V++S+LI+G  + G +  A           L+P+ + Y+ LI  YCK G
Sbjct: 410 DMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMG 469

Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLADY 211
              EA+  Y  M  +G + D     +L++T   Y
Sbjct: 470 YLKEALNAYAVMNHSGHVADHFTCNVLVATFCRY 503



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 1/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H++ ALK F +L       D + +NT +   C    L +A+ L  ++      P++ T+T
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LI   CK+G++  A ++  K +EKG    N   Y+ L+DG  K  + ++A  ++EEM  
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            ++ P+ V+++++ID   ++G   +           +L  ++ TY IL+ GY K      
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
              LY  M+R+G +PD     +L
Sbjct: 755 CFMLYKDMIRHGFLPDKFSWHSL 777



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 35/232 (15%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ + G+ P  +TYNT++  YC   R   A QL + +    +  +  T+ + ID  C
Sbjct: 197 LLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLC 256

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           ++ R     ++  +M       N +TY+ LI G+ +   ++ A  V++EM   N+ PN +
Sbjct: 257 RDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSI 316

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL-------------------- 173
           +Y+ LI G C  G + EAL      + + L P+ VTY  L                    
Sbjct: 317 TYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERM 376

Query: 174 ---------------IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                          I G CK G   EA+QL D ML+  + PD +  S L +
Sbjct: 377 RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLIN 428



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 12/207 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A ++  ++   GL P+ I Y+T+I  YC +  L EA+  +  +       +  T  +
Sbjct: 436 INNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNV 495

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  FC+ G++++A    + M   G   N VT+ C+I+GY  S +   AF V+++M    
Sbjct: 496 LVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFG 555

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFH------CALDNHLLPDVVTYAILIRGYCKAG 181
             P++ +Y  L+ GLC  G + EAL  FH       A+DN      V +   +   C++G
Sbjct: 556 HFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDN------VIFNTKLTSTCRSG 609

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A+ L + M+ N  +PD    + L
Sbjct: 610 NLSDAIALINEMVTNDFLPDNFTYTNL 636



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 97/198 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ F  +  RGL P + T N ++       ++D     F+ +    + P+  TF IL++
Sbjct: 124 AVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLN 183

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+ G+  +A  +  KM E G     VTY+ L++ Y K    K+A  + + M    I  
Sbjct: 184 ALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGV 243

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y++ ID LC+     +          N + P+ +TY  LI G+ + G+   A +++
Sbjct: 244 DVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVF 303

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M    ++P+ +  +TL
Sbjct: 304 DEMSLFNLLPNSITYNTL 321



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+    I+Y  +I G C    L+EAVQL + +  V + P+ +TF++LI+ F + G++++A
Sbjct: 380 GVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNA 439

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +  KM + G   N + YS LI  Y K   +K A + Y  M  +    +  + ++L+  
Sbjct: 440 KEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVAT 499

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C+ G +EEA Y  +      L P+ VT+  +I GY  +G   +A  ++D M   G  P 
Sbjct: 500 FCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPS 559



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 87/186 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A+K+   +T  G   D  T+N +I  +C  N + +A +L +++    + PN  T+  
Sbjct: 787 FDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L +   +      A  +   +LE G       Y  LI+G  +  N+K A  + +EM    
Sbjct: 847 LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           IS + V+ S ++ GL     +E A++     L+  ++P V T+  L+  YCK     +A+
Sbjct: 907 ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 188 QLYDSM 193
           +L   M
Sbjct: 967 ELRSIM 972



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K+  + AAL L G+  ++GL  P+   Y +++ G         A+ +FE++    ++P
Sbjct: 640 LCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEP 699

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++ F ++ID + ++G+      + S M  K    N+ TY+ L+ GY K   M   F +Y
Sbjct: 700 DTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLY 759

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC-ALDNHLLPDVVTYAILIRGYCK 179
           ++M  +   P+  S+  LI G C+    + A+       L+ H++ D  T+ +LI  +C+
Sbjct: 760 KDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVI-DRFTFNMLITKFCE 818

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
                +A +L   M +  ++P+
Sbjct: 819 RNEMKKAFELVKQMNQFMVIPN 840



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 36/243 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL  +  +   G   D  T N ++  +C   +L+EA      ++ + L PNS+
Sbjct: 467 KMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSV 526

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG------------YF--- 108
           TF  +I+ +   G    A  +F KM   G   ++ TY  L+ G            +F   
Sbjct: 527 TFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL 586

Query: 109 --------------------KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                               +S N+  A  +  EM  N+  P+  +Y+ LI GLCK+G +
Sbjct: 587 RCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKI 646

Query: 149 EEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
             AL     A++  LL P+   Y  L+ G  K G    A+ +++ ML   + PD +  + 
Sbjct: 647 VAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNV 706

Query: 208 LAD 210
           + D
Sbjct: 707 IID 709



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-LTCVQLKPNS 62
           +  +L  A+ L  ++      PD  TY  +I G C   ++  A+ L  K +    L PN 
Sbjct: 607 RSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNP 666

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +T L+D   K G    A  +F +ML K  + + V ++ +ID Y +        D+   
Sbjct: 667 AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   N+  N+ +Y+IL+ G  KR  M      +   + +  LPD  ++  LI GYC++  
Sbjct: 727 MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
              A+++   +   G + D    + L
Sbjct: 787 FDVAIKILRWITLEGHVIDRFTFNML 812



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 36/257 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDII--------------------------------- 28
           L+K  H  AAL +F ++ ++ +EPD +                                 
Sbjct: 676 LLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFN 735

Query: 29  --TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
             TYN ++ GY   + +     L++ +      P+  ++  LI  +C+    D A  +  
Sbjct: 736 LATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILR 795

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            +  +G   +  T++ LI  + +   MK AF++ ++M +  + PN+ +Y+ L +GL +  
Sbjct: 796 WITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTS 855

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
              +A       L++  +P    Y  LI G C+ G    AM+L D M   GI    + +S
Sbjct: 856 DFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMS 915

Query: 207 TLADYNLQSSGSQEHCI 223
            +    L +S   E+ I
Sbjct: 916 AIVR-GLANSKKIENAI 931



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 1/172 (0%)

Query: 38  CSLNRL-DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           C  NR+  +AVQ F  +    L P+  T  +++ +  KE ++D     F  ML KG   +
Sbjct: 115 CLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPD 174

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           V T++ L++   +    K+A  +  +M E+ + P  V+Y+ L++  CK+G  + A     
Sbjct: 175 VATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLID 234

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           C     +  DV TY + I   C+  R  +   L   M RN + P+ +  +TL
Sbjct: 235 CMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 74/137 (54%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++  A+KL  ++   G+    +  + I+ G  +  +++ A+ + + +  +Q+ P   TFT
Sbjct: 891  NIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFT 950

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             L+  +CKE  +  A  + S M     K +VV Y+ LI G   + ++++AF +YEEM + 
Sbjct: 951  TLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQR 1010

Query: 127  NISPNIVSYSILIDGLC 143
            ++ PN   Y +LID  C
Sbjct: 1011 DLWPNTSIYIVLIDSFC 1027



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 88/188 (46%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            LI+      A ++   L + G  P    Y T+I G C +  +  A++L +++  + +  +
Sbjct: 851  LIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSH 910

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++  + ++       ++++A  +   MLE      V T++ L+  Y K  N+  A ++  
Sbjct: 911  NVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRS 970

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
             M   ++  ++V+Y++LI GLC  G +E A   +       L P+   Y +LI  +C   
Sbjct: 971  IMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGN 1030

Query: 182  RPTEAMQL 189
               E+ +L
Sbjct: 1031 YQIESEKL 1038



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   F +LI    +   + DA   F  M  +G   +V T + ++    K Q +   +  +
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M    I P++ +++IL++ LC+RG  + A +      ++ + P  VTY  L+  YCK 
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR   A QL D M   GI  D
Sbjct: 224 GRYKAASQLIDCMASKGIGVD 244



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 84  MFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
           +F  ++E  P   +N   +  LI    +++ +  A   +  M    ++P++ + ++++  
Sbjct: 90  VFGALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGS 149

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           L K   ++     F   L   + PDV T+ IL+   C+ G+   A  L   M  +G+ P 
Sbjct: 150 LVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPT 209

Query: 202 GLLLSTLADY 211
            +  +TL ++
Sbjct: 210 AVTYNTLLNW 219


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ D+G+ PD+ITY+ +I  +C   R  +A QL   +   Q+ P+
Sbjct: 86  LCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPD 145

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+A  KEG++ +A  ++  ML +G     +TY+ +IDG+ K   +  A  + +
Sbjct: 146 VVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   + SP++V++S LI+G CK   ++  +  F       ++ + VTY  LI G+C+ G
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L + M+ +G+ P+ +   ++
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSM 292



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 107/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           ++AL L  ++ +  ++  ++ YN II   C       A  LF ++    + P+ IT++ +
Sbjct: 58  ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID+FC+ GR  DA  +   M+E+    +VVT+S LI+   K   +  A ++Y +M    I
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P  ++Y+ +IDG CK+  + +A             PDVVT++ LI GYCKA R    M+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++  M R GI+ + +  +TL
Sbjct: 238 IFCEMHRRGIVANTVTYTTL 257



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 4/198 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ + G +P    Y TII G C +   + A+ L  K+    +K + + +  +ID
Sbjct: 29  ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G    A  +F++M +KG   +V+TYS +ID + +S     A  +  +M E  I+P
Sbjct: 85  RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V++S LI+ L K G + EA   +   L   + P  +TY  +I G+CK  R  +A ++ 
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204

Query: 191 DSMLRNGIMPDGLLLSTL 208
           DSM      PD +  STL
Sbjct: 205 DSMASKSCSPDVVTFSTL 222



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G  PD++T+ T++ G C   R+ +A+ L +++     +P    +  +I+  CK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            + A  + SKM E   KA+VV Y+ +ID   K  +   A +++ EM +  I P++++YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +ID  C+ G   +A       ++  + PDVVT++ LI    K G+ +EA ++Y  MLR G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 198 IMPDGLLLSTLAD 210
           I P  +  +++ D
Sbjct: 177 IFPTTITYNSMID 189



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 91/151 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  +  A +++G +  RG+ P  ITYN++I G+C  +RL++A ++ + +      P+
Sbjct: 156 LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+ +CK  R+D+   +F +M  +G  AN VTY+ LI G+ +  ++ +A D+  
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M  + ++PN +++  ++  LC +  + +A 
Sbjct: 276 VMISSGVAPNYITFQSMLASLCSKKELRKAF 306



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 67/120 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L+ A ++   +  +   PD++T++T+I GYC   R+D  +++F ++    +  N++
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI  FC+ G +D A  + + M+  G   N +T+  ++      + ++ AF + E++
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 6/209 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++AA  LF ++  RGL PD +TYN++I G+  + RLD+ V  FE++  +  +P+ I
Sbjct: 142 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 201

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK G++      + +M   G K NVV+YS L+D + K   M+ A   Y +M
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ LID  CK G + +A    +  L   +  +VVTY  LI G C A R 
Sbjct: 262 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 321

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
            EA +L+  M   G++P+      LA YN
Sbjct: 322 KEAEELFGKMDTAGVIPN------LASYN 344



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   L+ + ++   GL+P++++Y+T++  +C    + +A++ +  +  V L PN  T+T 
Sbjct: 216 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 275

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CK G + DA  + ++ML+ G + NVVTY+ LIDG   ++ MK A +++ +M    
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ SY+ LI G  K   M+ AL   +      + PD++ Y   I G C   +   A 
Sbjct: 336 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            + + M   GI  + L+ +TL D   +S    E
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 428



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 116/209 (55%), Gaps = 1/209 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A +LFG++   G+ P++ +YN +I G+     +D A++L  +L    +KP+ + + 
Sbjct: 320 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 379

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             I   C   +++ A ++ ++M E G KAN + Y+ L+D YFKS N      + +EM E 
Sbjct: 380 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 439

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +I   +V++ +LIDGLCK  L+ +A+  F+  + D  L  +   +  +I G CK  +   
Sbjct: 440 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 499

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A  L++ M++ G++PD    ++L D N +
Sbjct: 500 ATTLFEQMVQKGLVPDRTAYTSLMDGNFK 528



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K  ++D AL+L  +L  RG++PD++ Y T I G CSL +++ A  +  ++    +K N
Sbjct: 350 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+ +T L+DA+ K G   +   +  +M E   +  VVT+  LIDG  K++ +  A D + 
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +  +  +  N   ++ +IDGLCK   +E A   F   +   L+PD   Y  L+ G  K 
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA+ L D M   G+  D L  ++L
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSL 557



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 112/212 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI    L+ A++ F ++    + P   + N ++  +  L + D+  + F+ +     +P
Sbjct: 69  VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 128

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              T+ I+ID  CKEG ++ A  +F +M  +G   + VTY+ +IDG+ K   +      +
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +    P++++Y+ LI+  CK G +   L  +     N L P+VV+Y+ L+  +CK 
Sbjct: 189 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 248

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           G   +A++ Y  M R G++P+    ++L D N
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 280



 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 98/190 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+K +  +   GL P+  TY ++I   C +  L +A +L  ++  V ++ N +
Sbjct: 247 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 306

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  C   RM +A  +F KM   G   N+ +Y+ LI G+ K++NM  A ++  E+
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+++ Y   I GLC    +E A    +   +  +  + + Y  L+  Y K+G P
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426

Query: 184 TEAMQLYDSM 193
           TE + L D M
Sbjct: 427 TEGLHLLDEM 436



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 96/186 (51%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +      L  L+EA+Q F K+   ++ P + +   L+  F K G+ DD    
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+  G +  V TY+ +ID   K  ++++A  ++EEM    + P+ V+Y+ +IDG  K
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +++ +  F    D    PDV+TY  LI  +CK G+    ++ Y  M  NG+ P+ + 
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 205 LSTLAD 210
            STL D
Sbjct: 238 YSTLVD 243



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 112/215 (52%), Gaps = 4/215 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTILI 69
            L L  ++ +  +E  ++T+  +I G C    + +AV  F +++    L+ N+  FT +I
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  CK+ +++ AT +F +M++KG   +   Y+ L+DG FK  N+  A  + ++M E  + 
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 548

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++++Y+ L+ GL     +++A       +   + PD V    +++ + + G   EA++L
Sbjct: 549 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608

Query: 190 YDSMLRNGIMP---DGLLLSTLADYNLQSSGSQEH 221
              ++++ ++    D  L +  +D NL SS   E 
Sbjct: 609 QSYLMKHQLLTSDNDNALPNIYSDQNLVSSREHEE 643



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 46/91 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++AA  LF Q+  +GL PD   Y +++ G      + EA+ L +K+  + +K +
Sbjct: 491 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 550

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            + +T L+       ++  A     +M+ +G
Sbjct: 551 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 581


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++ NT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA   F +ML KG   N VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 214 TYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN----HLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D+     L PD +TY  LI G CK
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HDLIDDMSMKGLKPDKITYTTLIBGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D ++ + L
Sbjct: 330 EGDLDSAFEHRKRMIQENIRLDDVVYTAL 358



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A + F+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K A D+ ++
Sbjct: 248 VTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIBG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML   + PD
Sbjct: 368 SVDAEKMLREMLSVRLKPD 386



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A + F ++  +GL P+ +T+ T+I G+C   R+D A ++++++    L P+
Sbjct: 222 LCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +   M  KG K + +TY+ LIBG  K  ++ SAF+  +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V Y+ LI GLC+ G   +A       L   L PD  TY ++I  +CK G
Sbjct: 342 RMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M R+G  P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRDGHAP------SVVTYNVLMNG 431



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++   L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A + ++
Sbjct: 177 VVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LIDG CK G ++ A   +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL B
Sbjct: 297 DLKQAHDLIDDMSMKGLKPDKITYTTLIB 325



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+   L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           E  +L   ML +G+ PD    S L
Sbjct: 195 EGFRLKSVMLASGVQPDVYTYSVL 218


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 126/242 (52%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D A +L   +   GL PD+I+YNT+ICG+C  ++L EA     K+    ++PN
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 62  SITFTILIDAFCK-----------------------------------EGRMDDATMMFS 86
             T+  +I+ FCK                                   +G M+ A  +F 
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           + +EKG K +++ Y+ L+ G  K   +  A  + ++M E+  SP+I +Y+++++GLCK G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + +A    + A+    +PD+ T+  LI GYCK     +A+++ D+ML +GI PD +  +
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 207 TL 208
           TL
Sbjct: 501 TL 502



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +F +  ++G +  II YNT++ G      + +A+QL + +      P+  T+ +
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK G + DA  + +  + KG   ++ T++ LIDGY K +NM  A ++ + M  + 
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++++Y+ L++GLCK   ++  +  F   L+    P+++TY ILI  +CK  + +EAM
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+  M   G+ PD + L TL
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTL 572



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+ ++  + KLF ++  RG+ P++ T+N  I G C    +DEA +L E +    L P
Sbjct: 225 VLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I++  LI  FCK  ++ +A     KM+  G + N  TY+ +I+G+ K+  M++A  + 
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +       P+  +YS LI+GLC  G M  A+  F+ A++      ++ Y  L++G  K 
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G   +A+QL   M+ +G  PD      +  YNL  +G
Sbjct: 405 GLVLQALQLMKDMMEHGCSPD------IWTYNLVVNG 435



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 95/180 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   + + G  PDI TYN ++ G C +  L +A  +          P+  TF  LID
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK+  MD A  +   ML  G   +V+TY+ L++G  K++ + +  D ++ M E   +P
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ILI+  CK   + EA+  F       L PD+VT   LI G C  G   +A +L+
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           + C ++A   LF ++  +G+ PDI+T+N +I   C    + E+ +LF K+    + PN  
Sbjct: 194 ENCQIEA-YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF I I   C++G +D+A  +   ++ +G   +V++Y+ LI G+ K   +  A     +M
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PN  +Y+ +I+G CK G+M+ A      A+    +PD  TY+ LI G C  G  
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             AM ++   +  G     +L +TL 
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLV 398



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 108/201 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L   +  +G E + ++Y  +I G+   N   EA  LF+++    + P+ +TF  LI
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              CK+G + ++  +FSK++++G   N+ T++  I G  +   +  A  + E +    ++
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+++SY+ LI G CK   + EA    H  +++ + P+  TY  +I G+CKAG    A ++
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
               +  G +PD    S+L +
Sbjct: 344 LRDAMFKGFIPDEFTYSSLIN 364



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+ +F ++     EP + +YN I+          +A +++ ++  + + P+  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T TI + +FC  GR   A  + + M  +G + N V+Y  +I G++K      A+ +++EM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P+I++++ LI  LCK+G ++E+   F   +   + P++ T+ I I+G C+ G  
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +L +S++  G+ PD +  +TL
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTL 292



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 114/210 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++  +   A K++ ++ D G+ PD+ T+   +  +C   R   A++L   +     + 
Sbjct: 120 ILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++++  +I  F KE    +A  +F +ML++G   +++T++ LI    K  N++ +  ++
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            ++ +  + PN+ +++I I GLC++G ++EA       +   L PDV++Y  LI G+CK 
Sbjct: 240 SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH 299

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA      M+ +G+ P+    +T+ +
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++D A+++   +   G+ PD+ITYNT++ G C   +LD  V  F+ +      PN I
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI++FCK+ ++ +A  +F +M  +G   ++VT   LI G   +  +  A++++  +
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E   S +   ++I+I+  C++  +  A   FH    +   PD  TY ++I  YCK G 
Sbjct: 593 EKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A       +  G++P
Sbjct: 653 IDLAHTFLLENISKGLVP 670



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 3/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD  +  F  + ++G  P+IITYN +I  +C   ++ EA++LF+++    L P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT--YSCLIDGYFKSQNMKSAFDV 119
            +T   LI   C  G +D A  +F   +EK  K +  T  ++ +I+ + +  N+  A  +
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFV-TIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKL 624

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + +M  ++ +P+  +Y ++ID  CK G ++ A       +   L+P   T   ++   C 
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
             R +EA+ + + M++NGI+P+
Sbjct: 685 THRLSEAVVIINLMVQNGIVPE 706



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 1/167 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNS 62
           K+  +  A++LF ++  RGL PDI+T  T+ICG CS   LD+A +LF  +    +   ++
Sbjct: 543 KDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYST 602

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             F I+I+AFC++  +  A  +F KM       +  TY  +ID Y K+ N+  A     E
Sbjct: 603 AIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
                + P+  +   +++ LC    + EA+   +  + N ++P+ V 
Sbjct: 663 NISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 4/213 (1%)

Query: 11  ALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQ--LFEKLTCVQLKPNSITFTI 67
           ALK+F Q+ T+ G +  + TY  +I     L+   EA++  L E    V  K     +  
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMI-EKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIG 81

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  + ++G++ +A  +F +M     + +V +Y+ +++   +      A  VY  M +  
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ +++I +   C  G    AL   +         + V+Y  +I G+ K     EA 
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            L+D ML+ GI PD L  + L     +    QE
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 6/215 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H      L+ Q+   GL  D  T N ++   C++NRL E    F  +      PN
Sbjct: 79  LAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPN 138

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C E R+ +AT +F +M + G   +VVTY  LI G   + N+  A  +++
Sbjct: 139 IVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198

Query: 122 EMC------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           EM       E N  PN+++Y+I++DGLCK G  +EA   F       ++P +++Y  LI 
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIH 258

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+C AG+  E+ +L D ML  G+ PD +  + L D
Sbjct: 259 GFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLID 293



 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +LF  +  +G EPD+I+YN +I GY    +++EA++L+ ++  V  +PN IT+  
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G++DDA  +FS M   G   N  TY   +DG  K+  +  A  ++ E+  +N
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               I + + LIDGLCK G +E A   F    +    P+VVTY I+I G+C+ G+  +A 
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 515

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M  NG  PD +  +TL
Sbjct: 516 VLIQKMEANGCTPDIITYNTL 536



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L      F  +  RG  P+I+TYNT+I G C  +R+ EA +LF ++  +   P+ +T+  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 68  LIDAFCKEGRMDDATMMFSKML------EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           LI   C  G ++ A  +  +ML      E   K NV+TY+ ++DG  K      A  ++E
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+I+SY+ LI G C  G  EE+       LD  L PD+VT+ +LI   CK G
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA +L   M+ +GI+PD +  ++L +
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIE 328



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 117/190 (61%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +LF ++  +G+ P II+YN++I G+C   + +E+ +L +++    L+P+ +TF +L
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID  CKEG++ +A  +   M+E G   ++VTY+ LI+G+    ++ SA +++  M     
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+++SY++LI+G  K   +EEA+  ++  L     P+V+TY  L++G   AG+  +A +
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411

Query: 189 LYDSMLRNGI 198
           L+  M  +GI
Sbjct: 412 LFSVMKAHGI 421



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 104/178 (58%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P++ITYN I+ G C + R DEA QLFE++    + P+ I++  LI  FC  G+ +++  
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +ML++G + ++VT++ LID   K   +  A  +   M E+ I P++V+Y+ LI+G C
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             G +  A   F         PDV++Y +LI GY K  +  EAM+LY+ ML  G  P+
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 389



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 102/185 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + + +L  ++ D+GL+PD++T+N +I   C   ++ EA +L   +    + P+ +T+  L
Sbjct: 267 EESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 326

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ FC  G ++ A  +F  M  KG + +V++Y+ LI+GY K+  ++ A  +Y EM     
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+++Y  L+ G+   G +++A   F     + +  +  TY I + G CK     EAM+
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446

Query: 189 LYDSM 193
           L+  +
Sbjct: 447 LFTEL 451



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 91/159 (57%), Gaps = 5/159 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KLF +L     + +I   N +I G C   +L+ A +LFEKL+    +PN +T+TI+I 
Sbjct: 444 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 503

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+EG++D A ++  KM   G   +++TY+ L+ G+++S  ++    +   M + ++SP
Sbjct: 504 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563

Query: 131 NIVSYSILIDGLCKRGLMEEAL-----YAFHCALDNHLL 164
           + ++ SI++D L K    +E L     +     +D HLL
Sbjct: 564 DAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLL 602



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 92/182 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KLF  +   G+  +  TY   + G C  + L EA++LF +L     K        
Sbjct: 406 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 465

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G+++ A  +F K+  +G + NVVTY+ +I G+ +   +  A  + ++M  N 
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+I++Y+ L+ G  +   +EE +   H      + PD +T +I++    K  +  E +
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585

Query: 188 QL 189
            L
Sbjct: 586 HL 587


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 119/200 (59%), Gaps = 4/200 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  + KLF  +   G++PDIITY+T+I GYC   ++DEA +L   +  V +KP+ +
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LI+ +CK  RM DA ++F +M   G   +++TY+ ++ G F+++   +A ++Y  +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
            ++     + +Y+I++ GLCK  L ++AL  F   C +D  L  +  T+ I+I    K G
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL--EARTFNIMIDALLKVG 557

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L+ +   NG++P+
Sbjct: 558 RNDEAKDLFVAFSSNGLVPN 577



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 112/197 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL P  I YN++I G C+ N+ + A +L  ++    +  
Sbjct: 307 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 366

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+I F  +ID+ CKEGR+ ++  +F  M+  G K +++TYS LIDGY  +  M  A  + 
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    + P+ V+YS LI+G CK   M++AL  F     + + PD++TY I+++G  + 
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486

Query: 181 GRPTEAMQLYDSMLRNG 197
            R   A +LY  + ++G
Sbjct: 487 RRTAAAKELYVGITKSG 503



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 112/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+P+I TY T++ GY +   L E   L + +    + PN   F+IL+ 
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++++A ++FSKM ++G   N VTY  +I    KS  ++ A   +E+M +  +SP
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             + Y+ LI GLC     E A       LD  +  + + +  +I  +CK GR  E+ +L+
Sbjct: 332 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 391

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+R G+ PD +  STL D
Sbjct: 392 DLMVRIGVKPDIITYSTLID 411



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ G+CS  +  EA+   +K+    ++P+
Sbjct: 133 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 192

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G K  + TY  L+ GY     +     + +
Sbjct: 193 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 252

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SIL+    K+  +EEA+  F       L P+ VTY  +I   CK+G
Sbjct: 253 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 312

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ P  ++ ++L
Sbjct: 313 RVEDAMLYFEQMIDEGLSPGNIVYNSL 339



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 108/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A+ +F ++  +GL P+ +TY  +I   C   R+++A+  FE++    L P +I
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI   C   + + A  +  +ML++G   N + ++ +ID + K   +  +  +++ M
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I++YS LIDG C  G M+EA       +   + PD VTY+ LI GYCK  R 
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A+ L+  M  +G+ PD
Sbjct: 455 KDALVLFREMESSGVSPD 472



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 112/200 (56%), Gaps = 3/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTIL 68
           A  +F +L  RG+ PD+ +YN ++ G C  NR  EA++L   +        P+ ++++ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ F KEG +D     +++ML++    NVVTY+ +I    K+Q +  A +V   M ++ +
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ ++Y+ ++ G C  G  +EA+        + + PDVVTY  L+   CK GR TEA +
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM + G+ P+     TL
Sbjct: 215 IFDSMTKRGLKPEITTYGTL 234



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 2/201 (0%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL+L   + D G +  PD+++Y+T+I G+     LD+    + ++   ++ PN +T+  +
Sbjct: 70  ALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSI 129

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A CK   +D A  + + M++ G   + +TY+ ++ G+  S   K A    ++M  + +
Sbjct: 130 IAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV 189

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+Y+ L+D LCK G   EA   F       L P++ TY  L++GY   G   E   
Sbjct: 190 EPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 249

Query: 189 LYDSMLRNGIMPDGLLLSTLA 209
           L D M+RNGI P+  + S L 
Sbjct: 250 LLDLMVRNGIHPNHYVFSILV 270



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 98/170 (57%), Gaps = 3/170 (1%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYS 101
           ++A  +F++L    + P+  ++ IL++  C E R  +A  +   M + G     +VV+YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+G+FK  ++   +  Y EM +  ISPN+V+Y+ +I  LCK   +++A+      + +
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            ++PD +TY  ++ G+C +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 202



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 107/207 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KL   +   G++PD +TY+T+I GYC ++R+ +A+ LF ++    + P+ IT+ I
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    +  R   A  ++  + + G +  + TY+ ++ G  K++    A  +++ +C  +
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +++I+ID L K G  +EA   F     N L+P+  TY ++       G   E  
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 598

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           QL+ SM  NG   D  +L+ +    LQ
Sbjct: 599 QLFLSMEDNGCTVDSGMLNFIVRELLQ 625



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA +L+  +T  G + ++ TYN I+ G C     D+A+++F+ L  + LK  + TF I+I
Sbjct: 491 AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 550

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K GR D+A  +F      G   N  TY  + +       ++    ++  M +N  +
Sbjct: 551 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 610

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            +    + ++  L +RG +  A        + H   +  T ++ I
Sbjct: 611 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 655


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KL  ++ ++G +PD++TYN +I G C   RLDEA++    +     +PN I
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++ + C  GR  DA  + S ML KG   +VVT++ LI+   +   +  A D+ E+M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  +PN +SY+ L+ G CK   M+ A+      +     PD+VTY  L+   CK G+ 
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A+++ + +   G  P  +  +T+ D  L   G  E  I
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVID-GLSKVGKTERAI 481



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM   G   N ++Y+ L+ G+ K + M  A +  + M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ L+  LCK G ++ A+   +        P ++TY  +I G  K G+ 
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A++L D M R G+ PD +  S+L    L   G  +  I
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVS-GLSREGKVDEAI 516



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+   K    +  RG  PDII   ++I G+C + +  +A  + E L      P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +LI  +CK G +D+A  +  +M       +VVTY+ ++     S  +K A +V +
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              +    P++++Y+ILI+  CK   + +A+       +    PDVVTY +LI G CK G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++  ++M   G  P+
Sbjct: 301 RLDEAIKFLNNMPSYGCQPN 320



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +G  P ++T+N +I   C    L  A+ + EK+      PNS+++  L+ 
Sbjct: 340 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCKE +MD A      M+ +G   ++VTY+ L+    K   +  A ++  ++     SP
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G  E A+          L PD++TY+ L+ G  + G+  EA++ +
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519

Query: 191 DSMLRNGIMPDGLLLSTL 208
             +   GI P+ +  +++
Sbjct: 520 HDLEGLGIRPNAITYNSI 537



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL++  ++    + PD++TYNTI+   C   +L +A+++ ++    +  P+ I
Sbjct: 196 KSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+A CKE  +  A  +  +M  KG K +VVTY+ LI+G  K   +  A      M
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+ G  
Sbjct: 313 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 372

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ + + M  +G  P+ L
Sbjct: 373 GRAIDILEKMPMHGCTPNSL 392



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A++    +  RG  PDI+TYNT++   C   ++D AV++  +L+     P  I
Sbjct: 403 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 462

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+ + A  +  +M  KG K +++TYS L+ G  +   +  A   + ++
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN ++Y+ ++ GLCK    + A+      +     P   TY ILI G    G  
Sbjct: 523 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 582

Query: 184 TEAMQLYDSMLRNGIM 199
            EA+ L + +   G++
Sbjct: 583 KEALDLLNELCSRGLV 598



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 106/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+ +  ++   G  P+ ++YN ++ G+C   ++D A++  + +      P+
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+ A CK+G++D A  + +++  KG    ++TY+ +IDG  K    + A  + +
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+I++YS L+ GL + G ++EA+  FH      + P+ +TY  ++ G CK+ 
Sbjct: 486 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 545

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A+     M+     P
Sbjct: 546 QTDRAIDFLAYMISKRCKP 564



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 86/151 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+++  QL+ +G  P +ITYNT+I G   + + + A++L +++    LKP+
Sbjct: 436 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L+    +EG++D+A   F  +   G + N +TY+ ++ G  KS+    A D   
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 555

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M      P   +Y+ILI+G+   GL +EAL
Sbjct: 556 YMISKRCKPTEATYTILIEGIAYEGLAKEAL 586



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 5/147 (3%)

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             + G ++D       M+ +G   +++  + LI G+ +    K A  V E + ++   P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +++Y++LI G CK G ++ AL      LD  ++ PDVVTY  ++R  C +G+  +AM++ 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQV----LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           D  L+    PD +  + L +   + SG
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESG 266



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +D A+K F  L   G+ P+ ITYN+I+ G C   + D A+     +   + KP 
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI+    EG   +A  + +++  +G
Sbjct: 566 EATYTILIEGIAYEGLAKEALDLLNELCSRG 596


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 115/214 (53%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++  +G  P ++TY ++I G   ++RLDEA  LFE+     +K N +
Sbjct: 626 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   NV T++CL+D   K++ +  A   ++ M
Sbjct: 686 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PN ++YSILI+GLC+     +A   +       L P+ +TY  +I G  KAG  
Sbjct: 746 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 805

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+     NG +PD       A YN    G
Sbjct: 806 LEASGLFSRFKANGGIPDS------ASYNAMIEG 833



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    +   +LF  + ++G   D   YN +I G+C   ++++A QL E++      P 
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +    G K NVV YS LIDG+ K   +  A+ + E
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    D    P+ +TY+ILI G C+  
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 768

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G+ P+ +  +T+
Sbjct: 769 KFNKAFVFWQEMQKLGLKPNTITYTTM 795



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 34/244 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-------- 52
           +L K   LD A++LF QL      P    YNT+I GY S  + DEA  L E+        
Sbjct: 309 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368

Query: 53  --------LTCVQLK------------------PNSITFTILIDAFCKEGRMDDATMMFS 86
                   LTC+  K                  PN  T+ ILID  C+EG+++ A  +  
Sbjct: 369 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRD 428

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   NV+T + +ID   K+Q ++ A  ++E M +   +PN V++S LIDGL K G
Sbjct: 429 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 488

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A   +   LD   +P  + Y  LIR + K GR  +  ++Y  M+  G  PD  L++
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548

Query: 207 TLAD 210
           T  D
Sbjct: 549 TYMD 552



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML +E  L+AAL++   +   GL P+++T N +I   C   +L+EA  +FE +      P
Sbjct: 413 MLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 472

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++TF+ LID   K GR+DDA  ++ KML+ G     + Y+ LI  +FK    +    +Y
Sbjct: 473 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 532

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM     SP++   +  +D + K G  E+    F     +  +PD  +Y+ILI G  KA
Sbjct: 533 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 592

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   E  +L+ +M   G + D
Sbjct: 593 GLANETYELFYAMKEQGCVLD 613



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +E  +DAAL L  ++    L+ DI+ YN  I  +    ++D + + F ++    L P
Sbjct: 239 VFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMP 298

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I   CK  R+D+A  +F ++ +         Y+ +I GY  +     A+ + 
Sbjct: 299 DDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL 358

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E        P++++Y+ ++  L K+  +EEAL  F   +    +P+V TY ILI   C+ 
Sbjct: 359 ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE-EMKRDAVPNVPTYNILIDMLCRE 417

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G+   A+++ D M R G+ P+ L ++ + D   ++   +E C
Sbjct: 418 GKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 459



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++   G  PD+   NT +         ++   LF ++      P++ +++ILI   
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G  ++   +F  M E+G   +   Y+ +IDG+ KS  +  A+ + EEM      P +
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A  N +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 710 LMQKGLTPNVYTWNCLLD 727



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 89/198 (44%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L  A  +   +      P    Y  +I     +   D  + LF ++  +  + N 
Sbjct: 171 VKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNV 230

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             FT LI  F +EGR+D A  +  +M      A++V Y+  ID + K+  +  ++  + E
Sbjct: 231 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHE 290

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  + + P+ V+Y+ +I  LCK   ++EA+  F     N  +P    Y  +I GY  AG+
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGK 350

Query: 183 PTEAMQLYDSMLRNGIMP 200
             EA  L +     G +P
Sbjct: 351 FDEAYGLLERQKAKGSIP 368



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 98/200 (49%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ +    D   ++  +++  G  P       ++       +L EA  + + +   + +P
Sbjct: 134 VMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRP 193

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
               +TILI A  +    D   ++F +M E G + NV  ++ LI  + +   + +A  + 
Sbjct: 194 AFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLL 253

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  N++  +IV Y++ ID   K G ++ +   FH    + L+PD VTY  +I   CKA
Sbjct: 254 DEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKA 313

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            R  EA++L++ + +N  +P
Sbjct: 314 NRLDEAVELFEQLEQNRKVP 333



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 2/119 (1%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           GP +N+     L+    KS+ ++ AFD+ + M +    P   +Y+ILI  L +    +  
Sbjct: 157 GPSSNISIE--LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPM 214

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L  FH   +     +V  +  LIR + + GR   A+ L D M  N +  D +L +   D
Sbjct: 215 LILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCID 273



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 50/109 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A   + ++   GL+P+ ITY T+I G      + EA  LF +       P+S ++  
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           +I+      +  DA  +F +   KG   +  T   L+D   K++ ++ A
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 111/198 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +T  GL P ++++NT++ GY  +  LDE  +L   +    ++P+  
Sbjct: 148 KEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVY 207

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T ++LI+  CKE +MDDA  +F +ML+ G   N VT++ LIDG+ K+  +  A ++Y +M
Sbjct: 208 THSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQM 267

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++            L PD +TY  LI G CK G  
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL 327

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A +    M++  I  D
Sbjct: 328 ETAFEYRKRMIKENIRLD 345



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 112/199 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   LD   +L   +   G++PD+ T++ +I G C  +++D+A +LF+++    L PN 
Sbjct: 182 IKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNG 241

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  ++K   D+ +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDE 301

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+ ++Y+ LIDG CK G +E A       +  ++  D   Y  LI G C+ GR
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGR 361

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ P+
Sbjct: 362 SVDAEKMLREMLSVGLKPE 380



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++ B GL P+ +T+ T+I G+C   R+D A++++ ++    L P+
Sbjct: 216 LCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPD 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +     +  +M  KG K + +TY+ LIDG  K  ++++AF+  +
Sbjct: 276 LITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRK 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  +  +Y+ LI GLC+ G   +A       L   L P++ TY ++I  +CK G
Sbjct: 336 RMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                 +L   M R G  P+
Sbjct: 396 DVWTGSKLLKEMQRXGYXPN 415



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 104/191 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G    +  +N ++  +C    +  A  +F+ +T   L+P+ ++F  L++ + K G +D+ 
Sbjct: 131 GYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S M   G + +V T+S LI+G  K   M  A ++++EM +N + PN V+++ LIDG
Sbjct: 191 FRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDG 250

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ++ A+  +   L   LLPD++TY  LI G CK G   +   L D M   G+ PD
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPD 310

Query: 202 GLLLSTLADYN 212
            +  +TL D N
Sbjct: 311 KITYTTLIDGN 321



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L     L  +++ +GL+PD ITY T+I G C    L+ A +  +++    ++ +
Sbjct: 286 LCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T LI   C+EGR  DA  M  +ML  G K  + TY+ +I+ + K  ++ +   + +
Sbjct: 346 DXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 122 EMCENNISPNIVS 134
           EM      PN V+
Sbjct: 406 EMQRXGYXPNXVT 418



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E   +    T   +I+   K +  K  +  YEE  
Sbjct: 69  FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEA---------------LYAFHCALDNHL------ 163
           E     ++  ++IL+   CK G +  A               + +F+  ++ ++      
Sbjct: 129 ECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188

Query: 164 --------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                          PDV T+++LI G CK  +  +A +L+D ML NG++P+G+  +TL 
Sbjct: 189 EGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLI 248

Query: 210 D 210
           D
Sbjct: 249 D 249


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KL  ++ ++G +PD++TYN +I G C   RLDEA++    +     +PN I
Sbjct: 94  KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++ + C  GR  DA  + S ML KG   +VVT++ LI+   +   +  A D+ E+M
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  +PN +SY+ L+ G CK   M+ A+      +     PD+VTY  L+   CK G+ 
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A+++ + +   G  P  +  +T+ D  L   G  E  I
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVID-GLSKVGKTERAI 312



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 129 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 188

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM   G   N ++Y+ L+ G+ K + M  A +  + M
Sbjct: 189 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ L+  LCK G ++ A+   +        P ++TY  +I G  K G+ 
Sbjct: 249 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             A++L D M R G+ PD +  S+L    L   G  +  I
Sbjct: 309 ERAIKLLDEMRRKGLKPDIITYSSLVS-GLSREGKVDEAI 347



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +G  P ++T+N +I   C    L  A+ + EK+      PNS+++  L+ 
Sbjct: 171 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 230

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCKE +MD A      M+ +G   ++VTY+ L+    K   +  A ++  ++     SP
Sbjct: 231 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 290

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G  E A+          L PD++TY+ L+ G  + G+  EA++ +
Sbjct: 291 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 350

Query: 191 DSMLRNGIMPDGLLLSTL 208
             +   GI P+ +  +++
Sbjct: 351 HDLEGLGIRPNAITYNSI 368



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A++    +  RG  PDI+TYNT++   C   ++D AV++  +L+     P  I
Sbjct: 234 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 293

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+ + A  +  +M  KG K +++TYS L+ G  +   +  A   + ++
Sbjct: 294 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN ++Y+ ++ GLCK    + A+      +     P   TY ILI G    G  
Sbjct: 354 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 413

Query: 184 TEAMQLYDSMLRNGIM 199
            EA+ L + +   G++
Sbjct: 414 KEALDLLNELCSRGLV 429



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 106/200 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L ++  L  A+ +  ++   G  P+ ++YN ++ G+C   ++D A++  + +      P
Sbjct: 196 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 255

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+ A CK+G++D A  + +++  KG    ++TY+ +IDG  K    + A  + 
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    + P+I++YS L+ GL + G ++EA+  FH      + P+ +TY  ++ G CK+
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
            +   A+     M+     P
Sbjct: 376 RQTDRAIDFLAYMISKRCKP 395



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 86/151 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+++  QL+ +G  P +ITYNT+I G   + + + A++L +++    LKP+
Sbjct: 267 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L+    +EG++D+A   F  +   G + N +TY+ ++ G  KS+    A D   
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 386

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M      P   +Y+ILI+G+   GL +EAL
Sbjct: 387 YMISKRCKPTEATYTILIEGIAYEGLAKEAL 417



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 94/171 (54%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C  + + +A++L +++     KP+ +T+ +LI+  CKEGR+D+A    + M   G + NV
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           +T++ ++     +     A  +  +M     SP++V+++ILI+ LC++GL+  A+     
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +   P+ ++Y  L+ G+CK  +   A++  D M+  G  PD +  +TL
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 65/139 (46%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+  +   CKE  +  A  +  +M  KG K +VVTY+ LI+G  K   +  A      M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
                PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+ G   
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 185 EAMQLYDSMLRNGIMPDGL 203
            A+ + + M  +G  P+ L
Sbjct: 205 RAIDILEKMPMHGCTPNSL 223



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +D A+K F  L   G+ P+ ITYN+I+ G C   + D A+     +   + KP 
Sbjct: 337 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI+    EG   +A  + +++  +G
Sbjct: 397 EATYTILIEGIAYEGLAKEALDLLNELCSRG 427


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++   G  P ++TY +++ G   ++RLDEA  LFE+     ++ N +
Sbjct: 492 KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  +M++KG   NV T++CL+DG  K++ +  A   ++ M
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM 611

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +   +PN ++Y ILI+GLCK     +A   +       L P+ +TY  +I G  K+G  
Sbjct: 612 KDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNV 671

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +A  L++    +G +PD       A YN    G
Sbjct: 672 AQASSLFERFRASGGIPDS------ASYNAMIEG 699



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K        +L+  + D+G   D   YNT+I G+C   ++++A QL E++  +   P 
Sbjct: 455 LVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPT 514

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D   K  R+D+A M+F +    G + N V YS LIDG+ K   +  A+ V E
Sbjct: 515 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVME 574

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++PN+ +++ L+DGL K   + EAL  F    D    P+ +TY ILI G CK  
Sbjct: 575 EMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVR 634

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           +  +A   +  M + G+ P+ +  + +    L  SG+
Sbjct: 635 KFNKAFVFWQEMQKQGLKPNTITYTAMIS-GLAKSGN 670



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 108/210 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K  +++AA K+   + + GL P++ T N +I   C   +LDEA  +FE +      P
Sbjct: 279 MLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSP 338

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  TF  LID   K+GR+DDA  ++ +ML+     NVV Y+ LI  +FK    +    +Y
Sbjct: 339 DGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMY 398

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM  +  SP+++  +  +D + K G  E+    F        LPD  +Y+ILI    KA
Sbjct: 399 KEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKA 458

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   E  +LY +M   G + D    +T+ D
Sbjct: 459 GFARETYELYYAMKDQGCVLDTRAYNTVID 488



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 34/244 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-------- 52
           +L K   LD A+++F Q+      P    YNT+I GY S  + DEA  L E+        
Sbjct: 175 VLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIP 234

Query: 53  --------LTCVQLK------------------PNSITFTILIDAFCKEGRMDDATMMFS 86
                   LTC+  K                  PN  T+ I+I   CK G ++ A  +  
Sbjct: 235 SVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRD 294

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M E G   NV T + +ID   K+Q +  A  ++E M     SP+  ++  LIDGL K+G
Sbjct: 295 AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQG 354

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A   +   LD   +P+VV Y  LIR + K  R  +  ++Y  M+R+G  PD +LL+
Sbjct: 355 RVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLN 414

Query: 207 TLAD 210
           T  D
Sbjct: 415 TYMD 418



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 1/219 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +DAAL L  ++     + DI+ YN  I  +  + ++D A + F ++    L P+ +
Sbjct: 108 REGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDV 167

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T ++   CK  R+D+A  +F +M +         Y+ +I GY  +     A+ + E  
Sbjct: 168 TYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQ 227

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++V+Y+ ++  L K+G  ++AL  F   +    +P++ TY I+I   CKAG  
Sbjct: 228 RAKGCIPSVVAYNCILTCLGKKGKTDKALRIFE-EMKRDAMPNLPTYNIIIGMLCKAGNV 286

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             A ++ D+M   G+ P+   ++ + D   ++    E C
Sbjct: 287 EAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEAC 325



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 100/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++   G  PD++  NT +         ++   LFE++      P++ +++ILI + 
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSL 455

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +   ++  M ++G   +   Y+ +IDG+ KS  +  A+ + EEM      P +
Sbjct: 456 VKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTV 515

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  ++DGL K   ++EA   F  A  N +  + V Y+ LI G+ K GR  EA  + + 
Sbjct: 516 VTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEE 575

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M++ G+ P+    + L D
Sbjct: 576 MMQKGLTPNVYTWNCLLD 593



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 98/199 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++  + D   ++ G+++  G  P   T   ++       +L EA  L + +   + +P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +T LI A  + G  D    +F++M E G + NV   + LI  + +   + +A  + +
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N    +IV Y++ ID   K G ++ A   FH    N L+PD VTY  ++   CKA 
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  EA+++++ M +N  +P
Sbjct: 181 RLDEAVEIFEQMEQNRQVP 199



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 88/198 (44%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   L  A  L   +      P    Y T+I     +   D  + LF ++  +  + N 
Sbjct: 37  VKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNV 96

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
              T LI  F +EGR+D A  +  +M      A++V Y+  ID + K   +  A+  + E
Sbjct: 97  HLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHE 156

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N + P+ V+Y+ ++  LCK   ++EA+  F     N  +P    Y  +I GY  AG+
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 183 PTEAMQLYDSMLRNGIMP 200
             EA  L +     G +P
Sbjct: 217 FDEAYSLLERQRAKGCIP 234



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 75/150 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ AL  F  + D    P+ ITY  +I G C + + ++A   ++++    LKPN
Sbjct: 595 LVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPN 654

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T +I    K G +  A+ +F +    G   +  +Y+ +I+G   +     A+ ++E
Sbjct: 655 TITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFE 714

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E      S +  +   L+D L K   +E+A
Sbjct: 715 ETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 2/115 (1%)

Query: 98  VTYSC--LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
             Y+C  L+    KS+ +  AFD+ + M      P   +Y+ LI  L + G  +  L  F
Sbjct: 25  TNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALF 84

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   +     +V     LIR + + GR   A+ L D M  N    D +L +   D
Sbjct: 85  NQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCID 139


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 108/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A++LFG++   G  P   TYNT+I G C + RL EA Q +E+L       + I
Sbjct: 113 KTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFI 172

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+D FCK  R+ +A  + ++++ +G       Y+C+ID  FK   +  A   +  M
Sbjct: 173 TYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRM 232

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ + P  V++++LIDGLCK   +  A   F   L++   P VV  + L+ G+CK G  
Sbjct: 233 EKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGV 292

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA ++++ M   G  P+
Sbjct: 293 DEAWRIFELMTNRGCTPN 310



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 112/237 (47%), Gaps = 35/237 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------------ 54
            L  A + + +L   G     ITYN ++ G+C  +R+ EAV+L  +L             
Sbjct: 151 RLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYN 210

Query: 55  CV-----------------------QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           C+                        ++P  +TFT+LID  CK  R+  A  +F   LE 
Sbjct: 211 CIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLES 270

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +VV  SCL+DG+ K   +  A+ ++E M     +PN VS +ILI+GLCK   + +A
Sbjct: 271 GGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQA 330

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              F   +     PDVVTY+  + G C+A R  +A Q+   ++  G  PD ++ + L
Sbjct: 331 REVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTAL 387



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 2/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   +D A   F +L D RGL  + ++YN +I  +C   R+DEA+QLF ++      P
Sbjct: 76  LCKSDMIDKAESWFQELKDFRGL-VNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAP 134

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++ T+  LI   C+  R+ +A   + ++L  G  A+ +TY+ L+DG+ K+  +  A ++ 
Sbjct: 135 STSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELL 194

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E+           Y+ +ID L K+G + EA   F+    + + P  VT+ +LI G CKA
Sbjct: 195 NELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKA 254

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            R   A +++ S L +G  P  ++ S L D   +  G  E
Sbjct: 255 NRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDE 294



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A   F ++   G+ P  +T+  +I G C  NR+  A ++F         P+
Sbjct: 216 LFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPS 275

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +  + L+D FCK G +D+A  +F  M  +G   N V+ + LI+G  K++ +  A +V+E
Sbjct: 276 VVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFE 335

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +    P++V+YS  +DGLC+   +++A       +D    PDVV Y  LI G C  G
Sbjct: 336 EVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLG 395

Query: 182 RPTEAMQLYDSMLR-NGIMPDGLLLSTLAD 210
           R  EA ++++  +R  G  P+    + L +
Sbjct: 396 RLDEARKVFEVDMRAAGCAPNNFTCNVLVN 425



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++F    + G  P ++  + ++ G+C    +DEA ++FE +T     PN
Sbjct: 251 LCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPN 310

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++  ILI+  CK  R+  A  +F +++++  K +VVTYS  +DG  ++  +  A  V  
Sbjct: 311 DVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLC 370

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKA 180
            + +   +P++V Y+ LI GLC  G ++EA   F   +      P+  T  +L+ G+  A
Sbjct: 371 MLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLA 430

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           GR  EA +L+   +  G+ PD    S +A+   ++ G
Sbjct: 431 GRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEG 467



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 5/120 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE-KLTCVQLKP 60
           L +   +D A ++   L D+G  PD++ Y  +I G CSL RLDEA ++FE  +      P
Sbjct: 356 LCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAP 415

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ T  +L++ F   GR+D+A  +F + +E+G + +  T+S + +   K++     +D+Y
Sbjct: 416 NNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTE----GWDIY 471



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 34/198 (17%)

Query: 33  IICGYCSLNRLDEAVQLFEKLT-----------------------CV----------QLK 59
           I+   C + +LDEA++LF  L                        C+          QL+
Sbjct: 5   IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLR 64

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
              +   I ID+ CK   +D A   F ++ +     N V+Y+ LI+ + K++ +  A  +
Sbjct: 65  ERHLV-NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQL 123

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + EM     +P+  +Y+ LI GLC+   + EA   +   L +      +TY IL+ G+CK
Sbjct: 124 FGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCK 183

Query: 180 AGRPTEAMQLYDSMLRNG 197
           A R  EA++L + ++  G
Sbjct: 184 ADRVPEAVELLNELVARG 201


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 126/242 (52%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D A +L   +   GL PD+I+YNT+ICG+C  ++L EA     K+    ++PN
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 62  SITFTILIDAFCK-----------------------------------EGRMDDATMMFS 86
             T+  +I+ FCK                                   +G M+ A  +F 
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           + +EKG K +++ Y+ L+ G  K   +  A  + ++M E+  SP+I +Y+++++GLCK G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + +A    + A+    +PD+ T+  LI GYCK     +A+++ D+ML +GI PD +  +
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 207 TL 208
           TL
Sbjct: 501 TL 502



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 117/201 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +F +  ++G +  II YNT++ G      + +A+QL + +      P+  T+ +
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +++  CK G + DA  + +  + KG   ++ T++ LIDGY K +NM  A ++ + M  + 
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++++Y+ L++GLCK   ++  +  F   L+    P+++TY ILI  +CK  + +EAM
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+  M   G+ PD + L TL
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTL 572



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+ ++  + KLF ++  RG+ P++ T+N  I G C    +DEA +L E +    L P
Sbjct: 225 VLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I++  LI  FCK  ++ +A     KM+  G + N  TY+ +I+G+ K+  M++A  + 
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +       P+  +YS LI+GLC  G M  A+  F+ A++      ++ Y  L++G  K 
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G   +A+QL   M+ +G  PD      +  YNL  +G
Sbjct: 405 GLVLQALQLMKDMMEHGCSPD------IWTYNLVVNG 435



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 95/180 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   + + G  PDI TYN ++ G C +  L +A  +          P+  TF  LID
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK+  MD A  +   ML  G   +V+TY+ L++G  K++ + +  D ++ M E   +P
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++Y+ILI+  CK   + EA+  F       L PD+VT   LI G C  G   +A +L+
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           + C ++A   LF ++  +G+ PDI+T+N +I   C    + E+ +LF K+    + PN  
Sbjct: 194 ENCQIEA-YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF I I   C++G +D+A  +   ++ +G   +V++Y+ LI G+ K   +  A     +M
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + PN  +Y+ +I+G CK G+M+ A      A+    +PD  TY+ LI G C  G  
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             AM ++   +  G     +L +TL 
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLV 398



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 108/201 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L   +  +G E + ++Y  +I G+   N   EA  LF+++    + P+ +TF  LI
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              CK+G + ++  +FSK++++G   N+ T++  I G  +   +  A  + E +    ++
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+++SY+ LI G CK   + EA    H  +++ + P+  TY  +I G+CKAG    A ++
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
               +  G +PD    S+L +
Sbjct: 344 LRDAMFKGFIPDEFTYSSLIN 364



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+ +F ++     EP + +YN I+          +A +++ ++  + + P+  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T TI + +FC  GR   A  + + M  +G + N V+Y  +I G++K      A+ +++EM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P+I++++ LI  LCK+G ++E+   F   +   + P++ T+ I I+G C+ G  
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +L +S++  G+ PD +  +TL
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTL 292



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 114/210 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++  +   A K++ ++ D G+ PD+ T+   +  +C   R   A++L   +     + 
Sbjct: 120 ILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++++  +I  F KE    +A  +F +ML++G   +++T++ LI    K  N++ +  ++
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            ++ +  + PN+ +++I I GLC++G ++EA       +   L PDV++Y  LI G+CK 
Sbjct: 240 SKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH 299

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +  EA      M+ +G+ P+    +T+ +
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++D A+++   +   G+ PD+ITYNT++ G C   +LD  V  F+ +      PN I
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI++FCK+ ++ +A  +F +M  +G   ++VT   LI G   +  +  A++++  +
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E   S +   ++I+I+  C +  +  A   FH    +   PD  TY ++I  YCK G 
Sbjct: 593 EKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A       +  G++P
Sbjct: 653 IDLAHTFLLENISKGLVP 670



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 3/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD  +  F  + ++G  P+IITYN +I  +C   ++ EA++LF+++    L P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT--YSCLIDGYFKSQNMKSAFDV 119
            +T   LI   C  G +D A  +F   +EK  K +  T  ++ +I+ +    N+  A  +
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFV-TIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKL 624

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           + +M  ++ +P+  +Y ++ID  CK G ++ A       +   L+P   T   ++   C 
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
             R +EA+ + + M++NGI+P+
Sbjct: 685 THRLSEAVVIINLMVQNGIVPE 706



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 1/167 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNS 62
           K+  +  A++LF ++  RGL PDI+T  T+ICG CS   LD+A +LF  +    +   ++
Sbjct: 543 KDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYST 602

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             F I+I+AFC +  +  A  +F KM       +  TY  +ID Y K+ N+  A     E
Sbjct: 603 AIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
                + P+  +   +++ LC    + EA+   +  + N ++P+ V 
Sbjct: 663 NISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 4/213 (1%)

Query: 11  ALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQ--LFEKLTCVQLKPNSITFTI 67
           ALK+F Q+ T+ G +  + TY  +I     L+   EA++  L E    V  K     +  
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMI-EKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIG 81

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++  + ++G++ +A  +F +M     + +V +Y+ +++   +      A  VY  M +  
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P++ +++I +   C  G    AL   +         + V+Y  +I G+ K     EA 
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            L+D ML+ GI PD L  + L     +    QE
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 115/214 (53%), Gaps = 6/214 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++  +G  P ++TY ++I G   ++RLDEA  LFE+     +K N +
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 440

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   NV T++CL+D   K++ +  A   ++ M
Sbjct: 441 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 500

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    PN ++YSILI+GLC+     +A   +       L P+ +TY  +I G  KAG  
Sbjct: 501 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 560

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            EA  L+     NG +PD       A YN    G
Sbjct: 561 LEASGLFSRFKANGGIPDS------ASYNAMIEG 588



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    +   +LF  + ++G   D   YN +I G+C   ++++A QL E++      P 
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +    G K NVV YS LIDG+ K   +  A+ + E
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    D    P+ +TY+ILI G C+  
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 523

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G+ P+ +  +T+
Sbjct: 524 KFNKAFVFWQEMQKLGLKPNTITYTTM 550



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 34/244 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-------- 52
           +L K   LD A++LF QL      P    YNT+I GY S  + DEA  L E+        
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 53  --------LTCVQLK------------------PNSITFTILIDAFCKEGRMDDATMMFS 86
                   LTC+  K                  PN  T+ ILID  C+EG+++ A  +  
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   NV+T + +ID   K+Q ++ A  ++E M +   +PN V++S LIDGL K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A   +   LD   +P  + Y  LIR + K GR  +  ++Y  M+  G  PD  L++
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 207 TLAD 210
           T  D
Sbjct: 304 TYMD 307



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML +E  L+AAL++   +   GL P+++T N +I   C   +L+EA  +FE +      P
Sbjct: 168 MLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 227

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++TF+ LID   K GR+DDA  ++ KML+ G     + Y+ LI  +FK    +    +Y
Sbjct: 228 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 287

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM     SP++   +  +D + K G  E+    F     +  +PD  +Y+ILI G  KA
Sbjct: 288 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 347

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           G   E  +L+ +M   G + D
Sbjct: 348 GLANETYELFYAMKEQGCVLD 368



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++   G  PD+   NT +         ++   LF ++      P++ +++ILI   
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 344

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G  ++   +F  M E+G   +   Y+ +IDG+ KS  +  A+ + EEM      P +
Sbjct: 345 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A  N +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 405 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 465 LMQKGLTPNVYTWNCLLD 482



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 11/191 (5%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILID----------AFCKEGRMDDATMMFSKMLEK 91
           +L EA  + + +   + +P    +TILI             CK  R+D+A  +F ++ + 
Sbjct: 25  KLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQN 84

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                   Y+ +I GY  +     A+ + E        P++++Y+ ++  L K+  +EEA
Sbjct: 85  RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 144

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           L  F   +    +P+V TY ILI   C+ G+   A+++ D M R G+ P+ L ++ + D 
Sbjct: 145 LRIFE-EMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDR 203

Query: 212 NLQSSGSQEHC 222
             ++   +E C
Sbjct: 204 LCKAQKLEEAC 214



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG---------- 141
           GP +N+     L+    KS+ ++ AFD+ + M +    P   +Y+ILI            
Sbjct: 7   GPSSNISIE--LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           LCK   ++EA+  F     N  +P    Y  +I GY  AG+  EA  L +     G +P
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 50/109 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A   + ++   GL+P+ ITY T+I G      + EA  LF +       P+S ++  
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           +I+      +  DA  +F +   KG   +  T   L+D   K++ ++ A
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633


>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
 gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
          Length = 1487

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 118/199 (59%), Gaps = 5/199 (2%)

Query: 24   EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            E D+ITY+T+I GYC   ++DEA++L   +  V LKP+++T++ LI+ +CK  RM++A  
Sbjct: 1204 EVDVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALS 1263

Query: 84   MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
            +F +M+  G   N++TY+ ++ G F++   ++A ++Y  + +  I   I + +I++ GLC
Sbjct: 1264 LFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLC 1323

Query: 144  KRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            K  L  EAL  F   C +D  L  +  T+ I+I    ++GR  E+  L+ ++  NG+ PD
Sbjct: 1324 KNNLTGEALQMFQNLCLMDVKL--ETRTFNIMIGSLLRSGRKDESKDLFAALSANGLAPD 1381

Query: 202  GLLLSTLADYNLQSSGSQE 220
             ++  TL   NL   G  E
Sbjct: 1382 -VVTYTLMIENLIEDGLLE 1399



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 116/207 (56%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +D A+KL   +   GL+PD +TY+T+I GYC ++R++ A+ LF ++ C  + PN IT+ I
Sbjct: 1223 MDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNI 1282

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ++    + G+   A  ++ +++++G +  + T + ++ G  K+     A  +++ +C  +
Sbjct: 1283 VLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEALQMFQNLCLMD 1342

Query: 128  ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +     +++I+I  L + G  +E+   F     N L PDVVTY ++I    + G   E+ 
Sbjct: 1343 VKLETRTFNIMIGSLLRSGRKDESKDLFAALSANGLAPDVVTYTLMIENLIEDGLLEESD 1402

Query: 188  QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
             L+ SM +NG +P+  +L+ +    LQ
Sbjct: 1403 NLFLSMEKNGCVPNSRMLNCIVRKLLQ 1429



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 86/178 (48%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++ AL LF Q+   G+ P+IITYN ++ G     +   A +++ ++    ++    
Sbjct: 1254 KISRMENALSLFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEIS 1313

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T  I++   CK     +A  MF  +     K    T++ +I    +S     + D++  +
Sbjct: 1314 TCNIVLQGLCKNNLTGEALQMFQNLCLMDVKLETRTFNIMIGSLLRSGRKDESKDLFAAL 1373

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              N ++P++V+Y+++I+ L + GL+EE+   F     N  +P+      ++R   + G
Sbjct: 1374 SANGLAPDVVTYTLMIENLIEDGLLEESDNLFLSMEKNGCVPNSRMLNCIVRKLLQKG 1431



 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF---EKLTCVQL 58
            L++    D +  LF  L+  GL PD++TY  +I        L+E+  LF   EK  CV  
Sbjct: 1357 LLRSGRKDESKDLFAALSANGLAPDVVTYTLMIENLIEDGLLEESDNLFLSMEKNGCV-- 1414

Query: 59   KPNSITFTILIDAFCKEGRMDDATMMFSKM 88
             PNS     ++    ++G +  A +  SK+
Sbjct: 1415 -PNSRMLNCIVRKLLQKGEIGRAGVYLSKI 1443


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 107/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD   K F ++   G+ P++I +  +I GY  +  LD A QL++ +      PN
Sbjct: 86  LCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPN 145

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI+ FCK G ++ A   F KMLE G   N   Y+ +IDG+FK  N+  A   + 
Sbjct: 146 VYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFS 205

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + +   +IV+Y ++I GL   G +++ L      + N L PD V    L+  + KAG
Sbjct: 206 EMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAG 265

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  +Y  +L  G  PD + +S+L D
Sbjct: 266 NTKAAYGVYRELLNRGFEPDAVTISSLID 294



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 69/267 (25%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK---------------------- 59
           G  PDI+TYN++I GYC   +++EA    +++   + +                      
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEV 61

Query: 60  ------------PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
                       PN IT+   ID  CK G +D     F +M + G   N++ ++CLIDGY
Sbjct: 62  FIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGY 121

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-- 165
            K  N+  A+ +Y++MC++   PN+ +Y+ LI+G CKRG++E A + F   L+  ++P  
Sbjct: 122 SKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNS 181

Query: 166 ---------------------------------DVVTYAILIRGYCKAGRPTEAMQLYDS 192
                                            D+V Y ++I G    GR  + +++ + 
Sbjct: 182 TVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMED 241

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           M+RNG+ PD ++L+TL   + ++  ++
Sbjct: 242 MVRNGLAPDKVVLTTLMHAHFKAGNTK 268



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 5/197 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K  +  AA  ++ +L +RG EPD +T +++I G C   R  +A   F    C + K N 
Sbjct: 262 FKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYF----CKE-KANE 316

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++T LID  CKEG +D+   +  +M E G   +   Y+  I    +   +  AF V  +
Sbjct: 317 VSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNK 376

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M E  I  ++++YS LI GL  +GLM EA   F   L   ++PD + + ILIRGY K   
Sbjct: 377 MVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDN 436

Query: 183 PTEAMQLYDSMLRNGIM 199
           P     L++ M R G++
Sbjct: 437 PVAISHLHEEMRRRGLL 453



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 5/207 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    LD  L++   +   GL PD +   T++  +        A  ++ +L     +P+
Sbjct: 226 LVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPD 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T + LID  CK+GR  DA   F K      KAN V+Y+ LIDG  K  N+     V  
Sbjct: 286 AVTISSLIDGLCKDGRYHDAKGYFCK-----EKANEVSYTALIDGICKEGNLDEVERVVM 340

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+   P+   Y+  I  LC++G + EA    +  ++  +  D++TY+ LI G    G
Sbjct: 341 EMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKG 400

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA QL+D ML+ GI+PD ++   L
Sbjct: 401 LMIEAKQLFDDMLKRGIIPDSMVFDIL 427



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 40/237 (16%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A +L+  +      P++ TY  +I G+C    L+ A   F K+  V + PNS  +T
Sbjct: 126 NLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYT 185

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG-------------------- 106
            +ID   K+G +D A   FS+M ++  + ++V Y  +I G                    
Sbjct: 186 SIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRN 245

Query: 107 ---------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                          +FK+ N K+A+ VY E+      P+ V+ S LIDGLCK G   +A
Sbjct: 246 GLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDA 305

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              F     N      V+Y  LI G CK G   E  ++   M  +G +PD  + ++ 
Sbjct: 306 KGYFCKEKANE-----VSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSW 357



 Score = 43.9 bits (102), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 50/91 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  A K+  ++ + G++ D++TY+++I G  +   + EA QLF+ +    + P+
Sbjct: 361 LCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPD 420

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           S+ F ILI  + K+      + +  +M  +G
Sbjct: 421 SMVFDILIRGYLKQDNPVAISHLHEEMRRRG 451


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 110/193 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  +   LD AL   G++ D GL+P +  YN++I G+C    +  A  L  ++   +L+P
Sbjct: 411 MFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEP 470

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +T+T L+  +C +G+++ A  ++ +M  KG   ++ T++ L+ G F++  ++ A  ++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM E N+ PN V+Y+++I+G C+ G M +A    +  ++  ++PD  +Y  LI G C  
Sbjct: 531 TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLT 590

Query: 181 GRPTEAMQLYDSM 193
           G+ +EA    D +
Sbjct: 591 GQASEAKVFVDGL 603



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL L  ++ + G+ P+I  YN +I   C     DEA  LF+++  + L PN
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ILID FC+ G++D A     +M++ G K +V  Y+ LI+G+ K  ++ +A  +  
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMA 461

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P +V+Y+ L+ G C +G + +AL  +H      ++P + T+  L+ G  +AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAG 521

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A++L+  M    + P+
Sbjct: 522 LIRDAVKLFTEMAEWNVKPN 541



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+ +   L  + L+PD++TY T++CG C +   +  +++ +++  ++  P+
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPS 331

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + L++   K G++++A  +  ++ E G   N+  Y+ LID   K +N   A  +++
Sbjct: 332 EAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFD 391

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------YAFHCALDNH---- 162
            M +  + PN V+YSILID  C+RG ++ AL               Y ++  ++ H    
Sbjct: 392 RMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFG 451

Query: 163 ----------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                           L P VVTY  L+ GYC  G+  +A++LY  M   GI+P     +
Sbjct: 452 DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511

Query: 207 TL 208
           TL
Sbjct: 512 TL 513



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 2/198 (1%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L L  ++ DRGL+PD + Y ++I          EA  +++ +      PN +T+T +I+ 
Sbjct: 667 LGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDVYEEMCENNISP 130
            CK G +++A ++ SKM       N VTY C +D   K   +MK A +++  + +  ++ 
Sbjct: 727 LCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLA- 785

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y++LI G C++G MEEA       + + + PD +TY  +I   C+     +A++L+
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845

Query: 191 DSMLRNGIMPDGLLLSTL 208
           +SM   GI PD +  +TL
Sbjct: 846 NSMTEKGIRPDRVAYNTL 863



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 104/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A++LF  + + G+ PD+  Y  +I   C L  L  A ++  ++       N
Sbjct: 202 LVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LID  CK+ ++ +A  +   +  K  K +VVTY  L+ G  K Q  +   ++ +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     SP+  + S L++GL KRG +EEAL       +  + P++  Y  LI   CK  
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA  L+D M + G+ P+ +  S L D
Sbjct: 382 NFDEAELLFDRMGKIGLCPNDVTYSILID 410



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 109/213 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL+L+ ++T +G+ P I T+ T++ G      + +AV+LF ++    +KPN +T+ +
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+ +C+EG M  A    ++M+EKG   +  +Y  LI G   +     A    + + + N
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N + Y+ L+ G C+ G +EEAL          +  D+V Y +LI G  K       +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            L   M   G+ PD ++ +++ D   ++   +E
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 106/220 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  A +   ++ ++G+ PD  +Y  +I G C   +  EA    + L     + N I
Sbjct: 554 EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L+  FC+EG++++A  +   M  +G   ++V Y  LIDG  K ++ K    + +EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEM 673

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y+ +ID   K G  +EA   +   ++   +P+ VTY  +I G CKAG  
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            EA  L   M     +P+ +      D   +  G  +  +
Sbjct: 734 NEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV 773



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 93/203 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD  L     +T   L P++ T + ++ G         A++LF+ +  V ++P+   +T 
Sbjct: 173 LDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTG 232

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I + C+   +  A  M  +M   G   N+V Y+ LIDG  K Q +  A  + +++    
Sbjct: 233 VIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKE 292

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y  L+ GLCK    E  L      L     P     + L+ G  K G+  EA+
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEAL 352

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   +   G+ P+  + + L D
Sbjct: 353 NLVKRVAEFGVSPNIFVYNALID 375



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 35/194 (18%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF----- 65
           A  ++  + + G  P+ +TY  +I G C    ++EA  L  K+      PN +T+     
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLD 760

Query: 66  ------------------------------TILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                                          +LI  FC++GRM++A+ + ++M+  G   
Sbjct: 761 ILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSP 820

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           + +TY+ +I    +  ++K A +++  M E  I P+ V+Y+ LI G C  G M +A    
Sbjct: 821 DCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880

Query: 156 HCALDNHLLPDVVT 169
           +  L   L P+  T
Sbjct: 881 NEMLRQGLKPNTET 894



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 54/101 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  ++ A +L  ++   G+ PD ITY T+I   C  N + +A++L+  +T   ++P+ +
Sbjct: 799 RQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRV 858

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
            +  LI   C  G M  AT + ++ML +G K N  T    I
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 114/199 (57%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
            + + ++ D G  P++  +N ++ G+C +  +  A  +F++++   L+P+ ++F  LI  
Sbjct: 211 WEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISG 270

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +C+   +++  ++ S M  +    +V TYS LI+G  K   ++ A  +++EMCE  + PN
Sbjct: 271 YCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPN 330

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            V+++ LIDG CK G ++ AL  F    D  + PD++TY  LI G C+ G   EA +L +
Sbjct: 331 GVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLN 390

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M+ NG  PD +  +TL D
Sbjct: 391 EMIGNGFKPDKITFTTLMD 409



 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 113/198 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F +++ RGL P ++++NT+I GYC    ++E   L   +   ++ P+  T++ LI+
Sbjct: 245 ARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALIN 304

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CKE R+++A  +F +M E G   N VT++ LIDG  K   +  A   +E M +  I P
Sbjct: 305 GLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRP 364

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y+ LI+GLC+ G ++EA    +  + N   PD +T+  L+ G CK G    A+++ 
Sbjct: 365 DLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIK 424

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M+  GI  D +  + L
Sbjct: 425 DRMVEEGIELDDVAFTAL 442



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 107/188 (56%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + PD+ TY+ +I G C  +R++EA  LF+++  + L PN +TFT LID  CK G++D A 
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
             F  M ++G + +++TY+ LI+G  +  ++K A  +  EM  N   P+ ++++ L+DG 
Sbjct: 352 RNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGC 411

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK G M+ AL      ++  +  D V +  LI G C+ GR  +A ++   ML  G  PD 
Sbjct: 412 CKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDD 471

Query: 203 LLLSTLAD 210
              + + D
Sbjct: 472 PTYTMVID 479



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 122/251 (48%), Gaps = 38/251 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL+ F  + DRG+ PD+ITYN +I G C    L EA +L  ++     KP+ I
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402

Query: 64  TFTILIDAFCKEGRMD-----------------------------------DATMMFSKM 88
           TFT L+D  CK+G MD                                   DA  M   M
Sbjct: 403 TFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDM 462

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
           L  G K +  TY+ +ID + K  ++K    + +EM  +   P +V+Y+ L++G CK+G M
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A    H  L+  ++P+ +T+ IL+ G+CK G   +  ++++     G++ D    + L
Sbjct: 523 KNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNG--EKGLVSDYASYTAL 579

Query: 209 ADYNLQSSGSQ 219
            + +++ S  Q
Sbjct: 580 VNESIKISKDQ 590



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 111/199 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++ A  LF ++ + GL P+ +T+ T+I G C   ++D A++ FE +    ++P+
Sbjct: 306 LCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPD 365

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI+  C++G + +A  + ++M+  G K + +T++ L+DG  K  +M SA ++ +
Sbjct: 366 LITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKD 425

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I  + V+++ LI GLC+ G + +A       L     PD  TY ++I  +CK G
Sbjct: 426 RMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKG 485

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                 +L   M R+G +P
Sbjct: 486 DVKMGAKLLKEMQRDGRVP 504



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 13/191 (6%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFTI-----LIDAFCKEGRMDD 80
           ++ ++ +I  Y     +++A+Q      C++L K N+ +  +     L+    K  +   
Sbjct: 155 VLVFDALIIAYTDSEFIEDAIQ------CLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPG 208

Query: 81  ATMMFS-KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
               F  ++L+ G   NV  ++ L+ G+ K  ++ +A  V++E+    + P++VS++ LI
Sbjct: 209 HCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLI 268

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            G C+   +EE            + PDV TY+ LI G CK  R  EA  L+D M   G++
Sbjct: 269 SGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLV 328

Query: 200 PDGLLLSTLAD 210
           P+G+  +TL D
Sbjct: 329 PNGVTFTTLID 339


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 116/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+K++ ++T  G  P IITYNT+I G C   +  EA  L +++     KP+  T+  
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C++ ++D A  ++ ++L+ G + +V+ ++ LI G   +  +  AF +Y EM E N
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+V+Y+ L+DG  + G +++A   +   LDN L PD+VTY   I+G C   R  E +
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGV 669

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L + +L  GIMP  +  S L
Sbjct: 670 LLLNEVLATGIMPTVITWSIL 690



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 103/182 (56%), Gaps = 1/182 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R + P++ TYN I+   C+   +D AV LF  L    + P+ +T++ L+    K  ++D+
Sbjct: 152 RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDN 211

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN-NISPNIVSYSILI 139
           A  +  +M   G +A+ V Y+ L+ G F++   + A  V+E++  +   SPN+ +Y +++
Sbjct: 212 ALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVML 271

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLCK G  +EA   +   + N+   D VTY ILI G C++G    A ++Y  M++ G++
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331

Query: 200 PD 201
            D
Sbjct: 332 LD 333



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF  L  RG+ PD +TY+T++ G    ++LD A+ L +++    ++ +++ +  
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 68  LIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           L+    + G  + A  ++ +++ + G   N+ TY  ++DG  K    K A +V+  M  N
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N   + V+Y ILI GLC+ G ++ A   +   +   L+ DV  Y  LI+G+C+ GR  EA
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            + +DS   +GI         +  YN+ + G
Sbjct: 354 WKFWDSTGFSGI-------RQITTYNIMTKG 377



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 115/198 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+     A +++  +   G +P+   YN +I G+C ++++++A++++ ++T     P  I
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTII 510

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LID  CK  +  +A+ +  +MLE+G K ++ TY+ LI G  + + +  A  +++E+
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +  +++ ++ILI GLC  G ++EA   +    + +  P++VTY  L+ G+ + G  
Sbjct: 571 LDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A  L+ ++L NG+ PD
Sbjct: 631 DKAASLWTAILDNGLKPD 648



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  + + A ++     + G E D+ +Y+++I  +C   R  +A ++++ +     KPN
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S  +  LI+ FC+  +++DA  ++ +M   G    ++TY+ LIDG  K++  + A  + +
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+I +Y+ LI GLC+   ++ AL  +   LD  L  DV+ + ILI G C AG
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAG 593

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  +Y  M      P+ +  +TL D
Sbjct: 594 KVDEAFCIYLEMKEKNCSPNLVTYNTLMD 622



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 100/171 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++ +RG +PDI TY ++I G C   ++D A+++++++    L+ + +   ILI 
Sbjct: 528 ASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIH 587

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++D+A  ++ +M EK    N+VTY+ L+DG+++  ++  A  ++  + +N + P
Sbjct: 588 GLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKP 647

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +IV+Y+  I GLC      E +   +  L   ++P V+T++IL+R   K G
Sbjct: 648 DIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-- 59
           L +   +D+A +++  +   GL  D+  YN++I G+C + R  EA + ++      ++  
Sbjct: 309 LCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI 368

Query: 60  ---------------------------------PNSITFTILIDAFCKEGRMDDATMMFS 86
                                            P+ +TF  LI   C+ G  + A  +  
Sbjct: 369 TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                G + +V +YS +I+ + K      A +VY+ M ++   PN   Y+ LI+G C+  
Sbjct: 429 DARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVS 488

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            + +A+  +     N   P ++TY  LI G CKA +  EA  L   ML  G  PD
Sbjct: 489 KINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPD 543



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 83/148 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D AL+++ ++ D GL+ D++ +N +I G CS  ++DEA  ++ ++      PN
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D F + G +D A  +++ +L+ G K ++VTY+  I G            +  
Sbjct: 614 LVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLN 673

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLME 149
           E+    I P ++++SIL+  + K G ++
Sbjct: 674 EVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAF----HCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +P + S++ L+D   +     +A   F    H A    + P++ TY I++R  C  G   
Sbjct: 116 NPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVD 175

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A+ L+ S+ R G+ PD +  STL
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTL 199


>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
          Length = 225

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 107/191 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ L   +   G+  D++TY T+I G C    +D+AV+L  ++    ++PN + ++ L
Sbjct: 11  DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 70

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  +CK GR +D   +F +M EKG + +VV Y+ LID   K    K A  V + M    +
Sbjct: 71  LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 130

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+Y++LI+ +CK G ++EA+       +  + PDVVTY  LI+G        EAM 
Sbjct: 131 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 190

Query: 189 LYDSMLRNGIM 199
           L + M+R  I+
Sbjct: 191 LLEEMVRGYII 201



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 103/175 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A++L G++ + G+EP+++ Y++++ GYC   R ++  ++F +++   ++P+ + +T
Sbjct: 44  EVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 103

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID+ CK G+   A  +   M+ +G + NVVTY+ LI+   K  ++K A  V ++M E 
Sbjct: 104 GLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 163

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            ++P++V+Y+ LI GL     M+EA++     +  +++      AI      K+G
Sbjct: 164 GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGYIIQSSQQSAIAQESKTKSG 218



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 87/171 (50%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C+    D+AV L   +    ++ + +T+  LI   C    +D A  +  +M E G + NV
Sbjct: 5   CADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNV 64

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           V YS L+ GY KS   +    V+ EM E  I P++V Y+ LID LCK G  ++A      
Sbjct: 65  VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 124

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +   L P+VVTY +LI   CK G   EA+ +   M   G+ PD +  +TL
Sbjct: 125 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 175



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 68/131 (51%)

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C +   D A  +   M   G +A+VVTY  LI G   +  +  A ++  EMCE+ I P
Sbjct: 3   ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 62

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V YS L+ G CK G  E+    F    +  + PDVV Y  LI   CK G+  +A  + 
Sbjct: 63  NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 122

Query: 191 DSMLRNGIMPD 201
           D M+R G+ P+
Sbjct: 123 DMMVRRGLEPN 133



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%)

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A  +   M    +  ++V+Y  LI GLC    +++A+       ++ + P+VV Y+ L++
Sbjct: 13  AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 72

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GYCK+GR  +  +++  M   GI PD ++ + L D
Sbjct: 73  GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 107


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ D+G+ PD+ITY+ +I  +C   R  +A QL   +   Q+ P+
Sbjct: 86  LCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPD 145

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+A  KEG++ +A  ++  ML +G     +TY+ +IDG+ K   +  A  + +
Sbjct: 146 VVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M   + SP++V++S LI+G CK   ++  +  F       ++ + VTY  LI G+C+ G
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L + M+ +G+ P+ +   ++
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSM 292



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 107/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           ++AL L  ++ +  ++  ++ YN II   C       A  LF ++    + P+ IT++ +
Sbjct: 58  ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID+FC+ GR  DA  +   M+E+    +VVT+S LI+   K   +  A ++Y +M    I
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P  ++Y+ +IDG CK+  + +A             PDVVT++ LI GYCKA R    M+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++  M R GI+ + +  +TL
Sbjct: 238 IFCEMHRRGIVANTVTYTTL 257



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 4/198 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++ + G +P    Y TII G C +   + A+ L  K+    +K + + +  +ID
Sbjct: 29  ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G    A  +F++M +KG   +V+TYS +ID + +S     A  +  +M E  I+P
Sbjct: 85  RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V++S LI+ L K G + EA   +   L   + P  +TY  +I G+CK  R  +A ++ 
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204

Query: 191 DSMLRNGIMPDGLLLSTL 208
           DSM      PD +  STL
Sbjct: 205 DSMASKSCSPDVVTFSTL 222



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G  PD++T+ T++ G C   R+ +A+ L +++     +P    +  +I+  CK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            + A  + SKM E   KA+VV Y+ +ID   K  +   A +++ EM +  I P++++YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +ID  C+ G   +A       ++  + PDVVT++ LI    K G+ +EA ++Y  MLR G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 198 IMPDGLLLSTLAD 210
           I P  +  +++ D
Sbjct: 177 IFPTTITYNSMID 189



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 98/174 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  +  A +++G +  RG+ P  ITYN++I G+C  +RL++A ++ + +      P+
Sbjct: 156 LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ LI+ +CK  R+D+   +F +M  +G  AN VTY+ LI G+ +  ++ +A D+  
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
            M  + ++PN +++  ++  LC +  + +A         + + P +V     I+
Sbjct: 276 VMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIVQAKFKIQ 329


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 3/204 (1%)

Query: 8   LDAALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           LDAAL L   ++        P+ I+Y T++   C+  R  +AV L   +    ++P+ +T
Sbjct: 72  LDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVT 131

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI   C    +D A  + ++M E G + NVV YSCL+ GY K+   +S   V+EEM 
Sbjct: 132 YGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS 191

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I P++V Y+ LID LC+ G +++A        +  L P+VVTY +LI   CK G   
Sbjct: 192 GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVR 251

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA+ L  +M   G+ PD +  +TL
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTL 275



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 114/192 (59%), Gaps = 2/192 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++L  ++ + G+EP+++ Y+ ++ GYC   R +   ++FE+++   ++P+ + +T 
Sbjct: 145 VDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTA 204

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+ C+ G++  A  +   M E+G + NVVTY+ LI+   K  +++ A D+ + M E  
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRPTE 185
           + P++V+Y+ LI GL     M+EA+      +  +  + PD++T+  +I G CK G   +
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQ 324

Query: 186 AMQLYDSMLRNG 197
           A+Q+   M  NG
Sbjct: 325 ALQVRAMMAENG 336



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 108/195 (55%), Gaps = 2/195 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC--VQLKPN 61
           KE  +  AL L   ++++G++PD++TYNT+I G  S+  +DEA+ L E++     +++P+
Sbjct: 246 KEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPD 305

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +I   CK G M  A  + + M E G + N+V ++ LI G  +   +K A ++ +
Sbjct: 306 LMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD 365

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  + + P+  +YSILI+G CK   +E A           + P+ V Y  L++  C  G
Sbjct: 366 EMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG 425

Query: 182 RPTEAMQLYDSMLRN 196
              +A  L++ M RN
Sbjct: 426 MMGQARDLFNEMDRN 440



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 37/235 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    ++  K+F +++ RG+EPD++ Y  +I   C   ++ +A ++ + +T   L+PN +
Sbjct: 176 KTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV 235

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI++ CKEG + +A  +   M EKG + +VVTY+ LI G      M  A  + EEM
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295

Query: 124 C--ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH------------------- 162
              E  + P++++++ +I GLCK G M +AL       +N                    
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH 355

Query: 163 ----------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                           L PD  TY+ILI G+CK  +   A      M   G+ P+
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A++L  ++   GL+PD  TY+ +I G+C + +++ A     ++    ++P 
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  L+ A C +G M  A  +F++M ++  K +   YS +I G FKS   K A +  +
Sbjct: 411 PVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLK 469

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + P+ V+YSI I+   K G +  A         +  +PDV  +  LI+GY   G
Sbjct: 470 DMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKG 529

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + ++L   M    +  D  ++ST+
Sbjct: 530 DTEKILELTREMTAKDVALDPKIISTI 556



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVT 99
           L E+  L   L  V+   +++++  ++ A C++G +D A  +   M  +     + N ++
Sbjct: 40  LPESPALLSALPSVR---DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAIS 96

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y+ L+      +    A  +   M +  + P++V+Y  LI GLC    ++ A+   +   
Sbjct: 97  YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ + P+VV Y+ L+ GYCK GR     ++++ M   GI PD ++ + L D
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALID 207


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 116/189 (61%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ PD++T ++I+ G+C   +L EA  LF ++  + L PN +++  +I++  K GR+ +A
Sbjct: 5   GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + S+M+ +G   ++VT + ++DG FK    K A +V+E + + N++PN V+YS L+DG
Sbjct: 65  FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 124

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G ME A          H+ P+V+T++ +I GY K G  ++A+ +   M++  +MP+
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 184

Query: 202 GLLLSTLAD 210
            ++ + L D
Sbjct: 185 TIVYAILID 193



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L  Q+  RG+  DI+T  T++ G   + +  EA ++FE +  + L PN
Sbjct: 55  LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+D +CK G+M+ A ++  KM ++    NV+T+S +I+GY K   +  A DV  
Sbjct: 115 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 174

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + N+ PN + Y+ILIDG  K G  + A           L    V + IL+    + G
Sbjct: 175 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 234

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  EA  L   M   GI PD +  ++L D
Sbjct: 235 RMDEARSLIIDMYSKGIDPDIVNYASLID 263



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 20/217 (9%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A+ +  ++  R + P+ I Y  +I GY      D A    +++   +L+ +++
Sbjct: 162 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 221

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F IL++   + GRMD+A  +   M  KG   ++V Y+ LIDGYFK  N  +A  + +EM
Sbjct: 222 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 281

Query: 124 CENNISPNIVSYSILIDGLCKRG---------LMEEALYAFHCALDNHL----------- 163
            E NI  ++V+Y+ LI GL + G          M E   A  C  ++ L           
Sbjct: 282 KEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGI 341

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +P+ VTY ILI G CK G   +A    D ML    +P
Sbjct: 342 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVP 378



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 101/178 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  A  LF ++ + GL+P+ ++Y TII       R+ EA  L  ++    +  + +
Sbjct: 22  RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 81

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T ++D   K G+  +A  +F  +L+     N VTYS L+DGY K   M+ A  V ++M
Sbjct: 82  TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 141

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++ PN++++S +I+G  K+G++ +A+      +  +++P+ + YAILI GY KAG
Sbjct: 142 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 199



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 45/251 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA--------------- 46
           L  +C  + AL +  ++   G+ P+ +TYN +I G C    +++A               
Sbjct: 320 LAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPT 379

Query: 47  --------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                               +Q+ EKL    L+ +   +  LI  FC+ G    A ++  
Sbjct: 380 PITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLD 439

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M+++G  A++VTY+ LI GY    +++ A   Y +M  + I+PNI +Y+ L+ GL   G
Sbjct: 440 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 499

Query: 147 LMEEALYAFHCAL----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           LMEE +      +    +  L+P+  TY IL+ GY + G   + + L+  M+  G +P  
Sbjct: 500 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP-- 557

Query: 203 LLLSTLADYNL 213
               TL  YN+
Sbjct: 558 ----TLKTYNV 564



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 20/225 (8%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD------------------- 44
           KE +  AAL +  ++ ++ +  D++ YN +I G   L + D                   
Sbjct: 267 KEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKT 326

Query: 45  -EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
            +A+ +  ++    + PN++T+ ILI   CK G ++ A     +ML        +T+  L
Sbjct: 327 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFL 386

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL 163
           +  Y +S+       ++E++  + +  ++  Y+ LI   C+ G+  +A       +   +
Sbjct: 387 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 446

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             D+VTY  LIRGYC      +A++ Y  M  +GI P+    +TL
Sbjct: 447 SADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 491



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L++  +L   GLE  +  YNT+I  +C L    +A  + +++    +  + +T+  L
Sbjct: 397 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 456

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY----FKSQNMKSAFDVYEEMC 124
           I  +C    ++ A   +S+M   G   N+ TY+ L+ G        + M+    +  EM 
Sbjct: 457 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 516

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E  + PN  +Y IL+ G  + G  ++ +      +    +P + TY +LI  Y K+G+  
Sbjct: 517 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 576

Query: 185 EAMQLYDSMLRNGIMPDGL 203
           EA +L + +L  G +P+  
Sbjct: 577 EARELLNDLLTKGRIPNSF 595



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 4/165 (2%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  RG+  D++TYN +I GYC+ + +++A++ + ++    + PN  T+  L+      G
Sbjct: 440 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 499

Query: 77  ----RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
                M++   + S+M E+G   N  TY  L+ GY +  N K    ++ EM      P +
Sbjct: 500 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 559

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +Y++LI    K G M EA    +  L    +P+  TY IL  G+
Sbjct: 560 KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 604



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 65/123 (52%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+  G   +VVT S ++ G+ +   +  A  ++ EM E  + PN VSY+ +I+ L K G 
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + EA       +   +  D+VT   ++ G  K G+  EA ++++++L+  + P+ +  S 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 208 LAD 210
           L D
Sbjct: 121 LLD 123



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++ +RGL P+  TY+ ++ GY  +    + + L  ++      P   T+ +LI  +
Sbjct: 510 KLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 569

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            K G+M +A  + + +L KG   N  TY  L  G+ 
Sbjct: 570 AKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 605



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 35/60 (58%)

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           N ++PDVVT + ++ G+C+ G+ TEA  L+  M   G+ P+ +  +T+ +   +S    E
Sbjct: 4   NGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 63


>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
 gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
          Length = 316

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 106/193 (54%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +   G+ PD   +N  I  YC   RLDEA   F K+  +   P+ +T+T +ID  CK GR
Sbjct: 71  MVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGR 130

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +DDA   F +M++ G   N++T++ LI G+      + A +++ EM +  I PN+ +++ 
Sbjct: 131 LDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNS 190

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +ID L K G + EA   F         P+VV+Y  +I GY  AG   E M+L D ML  G
Sbjct: 191 MIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 250

Query: 198 IMPDGLLLSTLAD 210
           + P+ + L+TL D
Sbjct: 251 LKPNAVNLNTLLD 263



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 112/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +   G +P+  TY +++ GY +   L +   + + +    ++P+   F I I 
Sbjct: 29  AREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNVKDLMVQNGMRPDRHVFNIEIY 88

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK GR+D+A++ F+KM + G   ++VTY+ +IDG  K   +  A   + +M ++ +SP
Sbjct: 89  AYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 148

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++++ LI G    G  E+A   F+  +D  + P+V T+  +I    K G+ TEA +L+
Sbjct: 149 NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMIDRLFKEGKVTEARKLF 208

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M R G  P+ +  +T+
Sbjct: 209 DLMPRAGAKPNVVSYNTM 226



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 16/193 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+  F Q+ D GL P+IIT+ T+I G+    + ++A +LF ++    + PN
Sbjct: 125 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPN 184

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  +ID   KEG++ +A  +F  M   G K NVV+Y+ +I GYF +  +     + +
Sbjct: 185 VNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 244

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + PN V+ + L+DG+   GL                 P+V T   LI   C+  
Sbjct: 245 DMLLIGLKPNAVNLNTLLDGMLSIGLK----------------PNVDTCKTLIDSCCEDD 288

Query: 182 RPTEAMQLYDSML 194
           R  + + L+  ML
Sbjct: 289 RIEDILTLFREML 301



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 83/149 (55%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN +T+++LI+  CK G   +A  +F+ M++ G K N  TY  L+ GY    N+    +V
Sbjct: 8   PNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNV 67

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            + M +N + P+   ++I I   CK G ++EA   F+       +PD+VTY  +I G CK
Sbjct: 68  KDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCK 127

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            GR  +AM  +  M+ +G+ P+ +  +TL
Sbjct: 128 IGRLDDAMSRFCQMIDDGLSPNIITFTTL 156



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 100/189 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P+++TY+ +I   C      EA ++F  +     KPN+ T+  L+  +  EG + D 
Sbjct: 5   GQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDM 64

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M++ G + +   ++  I  Y K   +  A   + +M +    P+IV+Y+ +IDG
Sbjct: 65  NNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDG 124

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK G +++A+  F   +D+ L P+++T+  LI G+   G+  +A +L+  M+  GI P+
Sbjct: 125 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPN 184

Query: 202 GLLLSTLAD 210
               +++ D
Sbjct: 185 VNTFNSMID 193



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 58/123 (47%)

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M   G   NVVTYS LI+   KS     A +++  M ++   PN  +Y  L+ G    G 
Sbjct: 1   MSRDGQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGN 60

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           + +        + N + PD   + I I  YCK GR  EA   ++ M + G MPD +  +T
Sbjct: 61  LVDMNNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTT 120

Query: 208 LAD 210
           + D
Sbjct: 121 VID 123



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 19/117 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A KLF  +   G +P++++YNT+I GY     + E ++L + +  + LKPN
Sbjct: 195 LFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPN 254

Query: 62  SI-------------------TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           ++                   T   LID+ C++ R++D   +F +ML K  K + +T
Sbjct: 255 AVNLNTLLDGMLSIGLKPNVDTCKTLIDSCCEDDRIEDILTLFREMLSKADKTDTIT 311


>gi|296087908|emb|CBI35191.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 115/199 (57%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +  +G  P++ +YNT+I GYC + R+D+A+ LFE++   +L PN++T+  LI   C  GR
Sbjct: 1   MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           + DA  +F +M+  G   ++VTY  L+D   K+ ++  A  + + +  +N+ P+I  Y+I
Sbjct: 61  LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +IDG+C+ G +E+A   F       L P+V TY I+  G CK G   EA +L+  M  N 
Sbjct: 121 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 180

Query: 198 IMPDGLLLSTLADYNLQSS 216
              DG   +T+    L+++
Sbjct: 181 CSADGCTYNTITQGFLRNN 199



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 4/220 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ LF ++  + L P+ +TYNT+I G C + RL +A+ LF ++      P+ +T+ 
Sbjct: 25  RMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYR 84

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  CK   +D A  +   +       ++  Y+ +IDG  ++  ++ A D++  +   
Sbjct: 85  ILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSK 144

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+ +Y+I+  GLCKRGL++EA   F    +N    D  TY  + +G+ +    + A
Sbjct: 145 GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRA 204

Query: 187 MQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
           +QL + ML  G   D     LL+  L+D  L  S  Q  C
Sbjct: 205 IQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSVKQILC 244



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 75/146 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K CHLD A+ L   +    L+PDI  Y  +I G C    L++A  LF  L+   LKPN
Sbjct: 90  LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+    CK G +D+AT +F +M E    A+  TY+ +  G+ ++     A  + E
Sbjct: 150 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGL 147
           EM     S ++ + ++L+  L   GL
Sbjct: 210 EMLARGFSCDVSTTTLLVGMLSDDGL 235


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 115/204 (56%), Gaps = 5/204 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +DAA K+  +++ +G  PD +++ TI+ G C L R++EA     +   VQ   N++   
Sbjct: 172 RVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAV--- 228

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             + A C E RM +   + ++M+++G + NVVTY+ ++D + K++ ++ A  +   M   
Sbjct: 229 --VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM 286

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +PN+++++ L+ G  + G + +AL  +H  +D    P  ++Y +LIRG C  G    A
Sbjct: 287 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 346

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +  ++SM RN ++P+    STL D
Sbjct: 347 LDFFNSMKRNALLPNATTYSTLVD 370



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +     +  ++  RGL+P+++TY TI+  +C    L  A  +  ++  +   PN
Sbjct: 232 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT L+  F ++G++ DA  M+  M+++G   + ++Y+ LI G     ++K A D + 
Sbjct: 292 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N + PN  +YS L+DG    G ++ A+  ++    +   P+VV Y  +I   CK  
Sbjct: 352 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 411

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  L D ML +   P+ +  +TL
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTL 438



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 94/187 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL ++  + D G  P  I+YN +I G C +  L  A+  F  +    L PN+ T++ L+D
Sbjct: 311 ALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVD 370

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F   G +D A +++++M   G K NVV Y+ +ID   K      A  + ++M  +N  P
Sbjct: 371 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 430

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++ LI  LC  G +  AL  FH    N   P+  TY  L+ G  + G   +A  + 
Sbjct: 431 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMV 490

Query: 191 DSMLRNG 197
             ML NG
Sbjct: 491 IEMLNNG 497



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ ++ ++   G +P+++ Y  +I   C     D+A  L +K+      PN++TF  
Sbjct: 378 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 437

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+  A  +F  M   G   N  TY+ L+ G F+  N K AF +  EM  N 
Sbjct: 438 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 497

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ +I+ LC+  + + A+      +   + PD  T+  +I  YCK G+ + A 
Sbjct: 498 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 557

Query: 188 QLYDSM 193
            L   M
Sbjct: 558 CLLGQM 563



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 93/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL  F  +    L P+  TY+T++ G+ +   LD A+ ++ ++     KPN + +T 
Sbjct: 343 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 402

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+   D A  +  KML      N VT++ LI        +  A +V+  M  N 
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +Y+ L+ GL + G  ++A       L+N     +VTY  +I   C+      AM
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 522

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M+  GI PD    + +
Sbjct: 523 LLLGRMMVQGIQPDAFTFNAI 543



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 12/207 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+   D A  L  ++      P+ +T+NT+I   C   R+  A+ +F  +      P
Sbjct: 406 VLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP 465

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+  L+    +EG   DA  M  +ML  G + ++VTY+ +I+   +    K A  + 
Sbjct: 466 NDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLL 525

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILI 174
             M    I P+  +++ +I   CK G +  A      + A +C        +VV Y ILI
Sbjct: 526 GRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPR------NVVAYTILI 579

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              C  G+ + AM     ML  GI P+
Sbjct: 580 SELCNQGKLSNAMVYLLKMLYEGICPN 606



 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L + C    A+ L G++  +G++PD  T+N II  YC   ++  A  L  ++  V    N
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 571

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TILI   C +G++ +A +   KML +G   N  T++ L+   F +        +++
Sbjct: 572 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 631

Query: 122 EMCEN 126
            + E+
Sbjct: 632 YIVED 636



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E +   A  +  ++ + G E  ++TYNT+I   C +     A+ L  ++    ++P+
Sbjct: 477 LFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPD 536

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF  +I A+CKEG++  A  +  +M       NVV Y+ LI        + +A     
Sbjct: 537 AFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 596

Query: 122 EMCENNISPNIVSYSILIDGL 142
           +M    I PN  ++++L+  +
Sbjct: 597 KMLYEGICPNEATWNVLVRAI 617



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 6/178 (3%)

Query: 34  ICGYCSLNRLDEAVQLFEKLTCVQLK-PNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           I  +      D A++ F + + +  + P    +  L+DA  +E  +     ++  M + G
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 152

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              NV TY+ LI    ++  + +A  + +EM      P+ VS+  ++ G+CK G +EEA 
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 212

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                      +P   +Y  ++   C   R  E   + + M++ G+ P+ +  +T+ D
Sbjct: 213 -----GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 265


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 107/190 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF  L  +G  PD  TY+++I G  +   +D A  L +++   +L PN +T+  LI 
Sbjct: 665 ARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIY 724

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK   +  A  +F+K+  KG   N +TY+ LIDG+ K  N   AF + ++M +  I P
Sbjct: 725 GLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQP 784

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + +Y+ILI GLC +G MEEA+      ++N++ P+ +TY  LI+GY + G      +LY
Sbjct: 785 TVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLY 844

Query: 191 DSMLRNGIMP 200
           + M   G++P
Sbjct: 845 NEMHICGLLP 854



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 94/181 (51%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           I +N +I G C L R+ +A  LFE L      P++ T++ LI      G +D A  +  +
Sbjct: 647 IMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDE 706

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           ML      N+VTY+ LI G  KS N+  A  ++ ++    ISPN ++Y+ LIDG CK G 
Sbjct: 707 MLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGN 766

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
             EA       +   + P V TY ILI G C  G   EA++L D M+ N + P+ +   T
Sbjct: 767 TTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWT 826

Query: 208 L 208
           L
Sbjct: 827 L 827



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 6/213 (2%)

Query: 2   LIKECHLDA-----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           L+   H DA     AL +F ++   G    + + N ++        +  AV +F+++ C 
Sbjct: 99  LLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCA 158

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
              P+  T  I+  A+C++GR+  A     +M E G   N+V Y  ++DGY +    + A
Sbjct: 159 GTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVA 218

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIR 175
             +   +    +SPN+V+Y++L+ G CK G MEEA        +N  ++ D V Y  LI 
Sbjct: 219 RKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALIN 278

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GYC+ GR  +A ++ D M+  G+  +  + +T+
Sbjct: 279 GYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTM 311



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 35/229 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-------------- 52
            ++ A ++  ++ D G++ ++  YNT+I GYC L R+ E  +L +               
Sbjct: 285 RMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYN 344

Query: 53  ----------------LTCVQLKPN-----SITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                            TC  +  N     ++T+  L++ FC  G +DDA  ++  ML++
Sbjct: 345 TLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKR 404

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   N ++ S L+DG+FK+   + A ++++E     ++ N+V+ + +I+GLCK   M EA
Sbjct: 405 GVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEA 464

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
              FH   +     D +TY  LI GYCK G    A Q+   M   G +P
Sbjct: 465 EELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVP 513



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL----- 58
           KE +L  A  L+ ++ ++GL+P++   + ++  +    ++DEA  + +KL    +     
Sbjct: 562 KEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCS 621

Query: 59  ---------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
                                +   I + I+I   CK GR+ DA  +F  +  KG   + 
Sbjct: 622 ASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDN 681

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TYS LI G   S ++  AF + +EM    ++PNIV+Y+ LI GLCK   +  A+  F+ 
Sbjct: 682 FTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNK 741

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                + P+ +TY  LI G+CK G  TEA +L   M++ GI P  +   T+  + L + G
Sbjct: 742 LQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPT-VFTYTILIHGLCTQG 800

Query: 218 SQEHCI 223
             E  I
Sbjct: 801 YMEEAI 806



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 80/142 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  L  ++    L P+I+TYN++I G C    +  AV LF KL    + PN+IT+  
Sbjct: 697 IDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT 756

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK+G   +A  +  KM+++G +  V TY+ LI G      M+ A  + ++M ENN
Sbjct: 757 LIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENN 816

Query: 128 ISPNIVSYSILIDGLCKRGLME 149
           + PN ++Y  LI G  + G M+
Sbjct: 817 VDPNFITYWTLIQGYARCGNMK 838



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 111/206 (53%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           KE  ++ A K+  ++ +   +  D + Y  +I GYC   R+++A ++ +++    ++ N 
Sbjct: 246 KEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNM 305

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             +  +I+ +CK GRM +   +      +G   +  +Y+ L+DGY +   M  AF+  + 
Sbjct: 306 FVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDM 365

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M  N  +   ++Y+ L++G C RG +++AL  +   L   ++P+ ++ + L+ G+ KAG+
Sbjct: 366 MVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGK 425

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A+ L+   L  G+  + + ++T+
Sbjct: 426 TEQALNLWKETLARGLARNVVTINTV 451



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A+ +F Q+   G  PD  T   +   YC   R+  A    +++  + L  N
Sbjct: 139 LVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVN 198

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  ++D +C+ G+ + A  +   +  KG   NVVTY+ L+ GY K   M+ A  V +
Sbjct: 199 LVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVK 258

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E+ EN  I  + V+Y  LI+G C+RG ME+A       +D  +  ++  Y  +I GYCK 
Sbjct: 259 EIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKL 318

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  E  +L  +    G+  D    +TL D
Sbjct: 319 GRMGEVEKLLQANEYRGVNLDEYSYNTLVD 348



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K    + AL L+ +   RGL  +++T NT+I G C   R+ EA +LF ++       +
Sbjct: 420 FFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCD 479

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+  LID +CK G +  AT +  +M   G   +V  ++  I G F ++      D+  
Sbjct: 480 SLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV 539

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +SPN V+Y  LI G CK G + +A   +   ++  L P++   ++L+  + + G
Sbjct: 540 EMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREG 599

Query: 182 RPTEA 186
           +  EA
Sbjct: 600 KVDEA 604



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 71/122 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C++  A+ LF +L  +G+ P+ ITYNT+I G+C      EA +L +K+    ++P 
Sbjct: 726 LCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPT 785

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILI   C +G M++A  +  +M+E     N +TY  LI GY +  NMK+   +Y 
Sbjct: 786 VFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYN 845

Query: 122 EM 123
           EM
Sbjct: 846 EM 847



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 35/226 (15%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +   G     +TYNT++ G+CS   +D+A++L+  +    + PN I+ + L+D F K G+
Sbjct: 366 MVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGK 425

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            + A  ++ + L +G   NVVT + +I+G  K++ M  A +++  M E +   + ++Y  
Sbjct: 426 TEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRT 485

Query: 138 LIDGLCKRGLMEEA------------------LYAFHCAL-----------------DNH 162
           LIDG CK G +  A                    +F   L                    
Sbjct: 486 LIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKG 545

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           L P+ VTY  LI G+CK G   +A  LY  M+  G+ P+  + S L
Sbjct: 546 LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVL 591



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +LF ++ +     D +TY T+I GYC L  L  A Q+  ++  +   P+
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 62  SITFTILIDAFC---KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
              F   I       + G+++D  +   +M  KG   N VTY  LI G+ K  N+  A  
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRV---EMSAKGLSPNTVTYGALIAGWCKEGNLHDACI 571

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV----------- 167
           +Y EM E  + PN+   S+L+    + G ++EA        D  ++ D            
Sbjct: 572 LYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVA 631

Query: 168 ---------------VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
                          + + I+I G CK GR  +A  L++ +   G +PD    S+L  + 
Sbjct: 632 HIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI-HG 690

Query: 213 LQSSGS 218
             +SGS
Sbjct: 691 CSASGS 696



 Score = 39.7 bits (91), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 2/120 (1%)

Query: 81  ATMMFSKMLE--KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           A  +F  ++E  K    +  ++  L+  +  +  +K A  V++EM +      + S + L
Sbjct: 76  APTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRL 135

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           ++ L + G +  A+  F        LPD  T AI+ + YC+ GR   A      M   G+
Sbjct: 136 LNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGL 195



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 34/63 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  + +++ A+KL  Q+ +  ++P+ ITY T+I GY     +    +L+ ++    L P 
Sbjct: 796 LCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPA 855

Query: 62  SIT 64
           + T
Sbjct: 856 NWT 858


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++  ++ ++ ++P + TY  I+ G   ++RLDEA  LFE+     ++ N +
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  +M++KG   NV T++ L+D   K++ +  A   ++ M
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    PN  +YSILI+GLC+     +A   +       L+P+VVTY  +I G  K G  
Sbjct: 464 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 523

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           T+A  L++    NG +PD    + L +
Sbjct: 524 TDAYSLFERFKANGGIPDAASFNALIE 550



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 107/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G   D   YN ++ G+C   ++ +A ++ E++    ++P   T+  ++D   
Sbjct: 319 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 378

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  R+D+A M+F +   KG + NVV YS LIDG+ K   +  A+ + EEM +  ++PN+ 
Sbjct: 379 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 438

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ L+D L K   + EAL  F    +    P+  TY+ILI G C+  +  +A   +  M
Sbjct: 439 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 498

Query: 194 LRNGIMPDGLLLSTL 208
            + G++P+ +  +T+
Sbjct: 499 QKQGLVPNVVTYTTM 513



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + A KL  +L +RG  P ++++N+I+       ++DEA+ LFE +     +PNS T+ 
Sbjct: 68  RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYN 126

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID  C  GR+++A  +  +M       N++T + ++D   K++ ++ A+ ++E   + 
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P+ V+Y  LIDGL K+G ++EA   F   LD     + V Y  LIR +   GR  + 
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  ++R G  PD  LL+T  D
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMD 270



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 2/196 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF +   +G+E +++ Y+++I G+  + R+DEA  + E++    L PN
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+DA  K   +++A + F  M E     N  TYS LI+G  + Q    AF  ++
Sbjct: 437 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 496

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ +I GL K G + +A   F     N  +PD  ++  LI G   A 
Sbjct: 497 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 556

Query: 182 RPTEAMQ--LYDSMLR 195
           R  EA Q    D+ +R
Sbjct: 557 RAMEAYQAGWLDTTMR 572



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A K+F   + RG  PD +TY ++I G     ++DEA +LFEK+       N
Sbjct: 167 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 226

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI  F   GR +D   +F +++ +G K ++   +  +D  FK+  ++    ++E
Sbjct: 227 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 286

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++      P++ SYSILI GL K G   E    FH         D   Y  ++ G+CK+G
Sbjct: 287 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 346

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A ++ + M    + P
Sbjct: 347 KVHKAYEILEEMKEKCVQP 365



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A ++  ++    L P+++T N ++   C   +L+EA ++FE  +     P+ +T+ 
Sbjct: 137 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 196

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K+G++D+A  +F KML+ G  AN V Y+ LI  +F     +    +++E+   
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++   +  +D + K G +E+    F        LPDV +Y+ILI G  KAG+  E 
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++ +M + G   D    + + D
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVD 340



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 104/198 (52%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F +L  RG +PD+   NT +        +++   +FE +      P+  +++ILI   
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G+  + + +F  M ++G   +   Y+ ++DG+ KS  +  A+++ EEM E  + P +
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  ++DGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M++ G+ P+    ++L D
Sbjct: 428 MMKKGLTPNVYTWNSLLD 445



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 1/200 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K F +L  +GL+PD ++Y ++I   C   RL EA +LF ++   +  P +  +  +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +   GR +DA  +  ++ E+G   +VV+++ ++    K + +  A  ++E M + +  P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEP 120

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+I+ID LC  G +EEA           L P+++T  I++   CKA +  EA +++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           +S  + G  PD +   +L D
Sbjct: 181 ESASQRGCNPDCVTYCSLID 200


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 1/213 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL  ++  +G +PD++TYN +I G C   RLDEA++    +     KPN IT  I++ 
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C  GR  DA  + S ML KG   +VVT++ LI+   + + +  A DV E+M ++   P
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N +SY+ L+ G C+   M+ A+      +     PD+VTY  L+   CK G+   A+++ 
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           + +   G  P  +  +T+ D  L   G  E+ +
Sbjct: 442 NQLSSKGCSPVLITYNTVID-GLTKVGKTEYAV 473



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 105/193 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +  ++   G  P+ ++YN ++ G+C   ++D A++  E +      P+ +T+  
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A CK+G++D A  + +++  KG    ++TY+ +IDG  K    + A ++ EEM    
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I++YS L+ GL + G ++EA+  FH      + P  VTY  ++ G CKA + + A+
Sbjct: 484 LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 543

Query: 188 QLYDSMLRNGIMP 200
                M+  G  P
Sbjct: 544 DFLAYMVEKGCKP 556



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++  +  A  +  KM + G   N ++Y+ L+ G+ + + M  A +  E M
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ L+  LCK G ++ A+   +        P ++TY  +I G  K G+ 
Sbjct: 410 VSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A++L + M R G+ PD +  STL
Sbjct: 470 EYAVELLEEMRRKGLKPDIITYSTL 494



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +  +G  P ++T+N +I   C    L  A+ + EK+      PNS+++  L+ 
Sbjct: 332 AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+E +MD A      M+ +G   ++VTY+ L+    K   + +A ++  ++     SP
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G  E A+          L PD++TY+ L+RG  + G+  EA++++
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511

Query: 191 DSMLRNGIMPDGL 203
             M    I P  +
Sbjct: 512 HDMEGLSIKPSAV 524



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 32/242 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+  LK   ++  +G  PD+I   ++I G+C   +  +A ++ E L      P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM--------------------------------L 89
            IT+ +LI  +CK G +D A  +  +M                                L
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQL 235

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
           ++    +V+TY+ LI+       +  A  + +EM +    P++V+Y++LI+G+CK G ++
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 295

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EA+   +        P+V+T+ I++R  C  GR  +A +L   MLR G  P  +  + L 
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 210 DY 211
           ++
Sbjct: 356 NF 357



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL++  +++   + PD++TYNTI+   C   +L EA+++ ++    +  P+ I
Sbjct: 188 KSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI 244

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+A C +  +  A  +  +M +KG K +VVTY+ LI+G  K   +  A      M
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+    
Sbjct: 305 PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLL 364

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ + + M ++G +P+ L
Sbjct: 365 GRAIDVLEKMPKHGCVPNSL 384



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 110/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+++  +   R   PD+ITY  +I   C+ + + +A++L +++     KP+ +T+ +
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  CKEGR+D+A    + M   G K NV+T++ ++     +     A  +  +M    
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++V+++ILI+ LC++ L+  A+        +  +P+ ++Y  L+ G+C+  +   A+
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +  + M+  G  PD +  +TL
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTL 424



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 90/173 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +D A++    +  RG  PDI+TYNT++   C   ++D AV++  +L+     P  I
Sbjct: 395 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI 454

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+ + A  +  +M  KG K +++TYS L+ G  +   +  A  ++ +M
Sbjct: 455 TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
              +I P+ V+Y+ ++ GLCK      A+      ++    P   TY ILI G
Sbjct: 515 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 82/141 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +DAA+++  QL+ +G  P +ITYNT+I G   + + + AV+L E++    LKP+
Sbjct: 428 LCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPD 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L+    +EG++D+A  +F  M     K + VTY+ ++ G  K+Q    A D   
Sbjct: 488 IITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLA 547

Query: 122 EMCENNISPNIVSYSILIDGL 142
            M E    P   +Y+ILI+G+
Sbjct: 548 YMVEKGCKPTEATYTILIEGI 568



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 3/151 (1%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I +    + G +++      +M+ +G   +V+  + LI G+ +S   K A  + E +  +
Sbjct: 111 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENS 170

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++++Y++LI G CK G +++AL          + PDVVTY  ++R  C +G+  EA
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKEA 227

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           M++ D  L+    PD +  + L +     SG
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSG 258


>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
          Length = 346

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 107/191 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ L   +   G+  D++TY T+I G C    +D+AV+L  ++    ++PN + ++ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  +CK GR +D   +F +M EKG + +VV Y+ LID   K    K A  V + M    +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+Y++LI+ +CK G ++EA+       +  + PDVVTY  LI+G        EAM 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 189 LYDSMLRNGIM 199
           L + M+R  I+
Sbjct: 312 LLEEMVRGYII 322



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITFTILIDAFCKEGRMDDAT 82
           D ++YNT++   C     D A  L   ++       +PN++++T+L+ A C + R D A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAV 135

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +   M   G +A+VVTY  LI G   +  +  A ++  EMCE+ I PN+V YS L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           CK G  E+    F    +  + PDVV Y  LI   CK G+  +A  + D M+R G+ P+
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 95/185 (51%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P+ ++Y  ++   C+  R D+AV L   +    ++ + +T+  LI   C    +D A  
Sbjct: 112 RPNAVSYTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M E G + NVV YS L+ GY KS   +    V+ EM E  I P++V Y+ LID LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  ++A       +   L P+VVTY +LI   CK G   EA+ +   M   G+ PD +
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 204 LLSTL 208
             +TL
Sbjct: 292 TYNTL 296



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 103/175 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A++L G++ + G+EP+++ Y++++ GYC   R ++  ++F +++   ++P+ + +T
Sbjct: 165 EVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 224

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID+ CK G+   A  +   M+ +G + NVVTY+ LI+   K  ++K A  V ++M E 
Sbjct: 225 GLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            ++P++V+Y+ LI GL     M+EA++     +  +++      AI      K+G
Sbjct: 285 GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGYIIQSSQQSAIAQESKTKSG 339



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 6/171 (3%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM-LEKGP--KANVVT 99
           L EA  L + L  V+   +++++  ++ A C+ G  D A  +   M LE  P  + N V+
Sbjct: 61  LGEATSLLDALPSVR---DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y+ L+      +    A  +   M    +  ++V+Y  LI GLC    +++A+       
Sbjct: 118 YTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ + P+VV Y+ L++GYCK+GR  +  +++  M   GI PD ++ + L D
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 4/204 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +  G +   G      ++N +I GYC     DEA  + +++    + P + 
Sbjct: 321 KSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTS 380

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I I A C+ GR+DDA  + S M       +VV+Y+ L+ GY K +    A  +++++
Sbjct: 381 TYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDL 436

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              NI+P+IV+Y+ LIDGLC+ G +E A           + PDV+TY  L++G+ K G  
Sbjct: 437 KAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNL 496

Query: 184 TEAMQLYDSMLRNGIMPDGLLLST 207
           + A ++YD MLR GI PDG   +T
Sbjct: 497 SMATEIYDEMLRKGIKPDGYAYTT 520



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 2/194 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++A+L LF  L    + P I+TYNT+I G C    L+ A +L E++T   + P+ IT+T 
Sbjct: 427 VEASL-LFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTT 485

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
           L+  F K G +  AT ++ +ML KG K +   Y+    G  +  + + AF ++EEM  E+
Sbjct: 486 LLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAED 545

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + +P++  Y++ IDGLCK G +E+A+          L+PD VTY  +IRGY + GR   A
Sbjct: 546 HHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMA 605

Query: 187 MQLYDSMLRNGIMP 200
             LYD ML   + P
Sbjct: 606 RDLYDEMLSKRLSP 619



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 10/204 (4%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+  YN  I G C +  L++A++   K+  V L P+ +T+T +I  + ++GR   A  +
Sbjct: 549 PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDL 608

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + +ML K    +V+TY  LI G+ K+  ++ AF    EM +  + PN+++++ L+ G+CK
Sbjct: 609 YDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCK 668

Query: 145 RGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G ++EA Y + C ++   + P+  +Y ILI  +C   +  E ++LY  ML   I PDG 
Sbjct: 669 AGNIDEA-YRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGY 727

Query: 204 LLSTLADY--------NLQSSGSQ 219
               L  +         L SSG Q
Sbjct: 728 THRALFKHLEKDHESMALDSSGKQ 751



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L+ A++   ++   GL PD +TY T+I GY    R   A  L++++   +L P+
Sbjct: 561 LCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +LI    K GR++ A    ++M ++G + NV+T++ L+ G  K+ N+  A+    
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC 680

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  ISPN  SY+ILI   C     EE +  +   LD  + PD  T+  L + + +  
Sbjct: 681 KMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFK-HLEKD 739

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
             + A+            P G   +  A   L+ + ++EH
Sbjct: 740 HESMALDSSGKQPEQQQQPRGSSGNGEARLKLRRTPNEEH 779



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 36/231 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ A +L  ++T + + PD+ITY T++ G+     L  A ++++++    +KP+   +T
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYT 519

Query: 67  ------------------------------------ILIDAFCKEGRMDDATMMFSKMLE 90
                                               + ID  CK G ++ A     K+  
Sbjct: 520 TRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR 579

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G   + VTY+ +I GY +    K A D+Y+EM    +SP++++Y +LI G  K G +E+
Sbjct: 580 VGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQ 639

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           A           + P+V+T+  L+ G CKAG   EA +    M   GI P+
Sbjct: 640 AFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 4/194 (2%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F ++  +G  P +   N ++        +++A +++E +    + P  ITF  ++D+  K
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G ++    ++ +M  +  + + VTY+ LI+G+ KS  M+ A   + +M  +       S
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           ++ LI+G CK+GL +EA       L+  + P   TY I IR  C+ GR  +A +L  SM 
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM- 405

Query: 195 RNGIMPDGLLLSTL 208
                PD +  +TL
Sbjct: 406 ---AAPDVVSYNTL 416



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           FEK+      P+     I++        M+ A  ++  M+  G    V+T++ ++D  FK
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           + +++    ++ EM   NI  + V+Y+ILI+G  K G MEEA   FH  +     P V  
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEA-RRFHGDMQRSGFP-VTP 344

Query: 170 YAI--LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           Y+   LI GYCK G   EA  + D ML  GI P      T + YN+
Sbjct: 345 YSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYP------TTSTYNI 384


>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
 gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
 gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
          Length = 642

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 10/215 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A K+  ++   GL  +   Y+T+I G+C    +D A++++E +    ++PN
Sbjct: 323 LVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPN 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ +I      G+M +A ++F +M+      N++TY  +I GYFK  +   A  V+E
Sbjct: 383 VVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWE 442

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN VSYSILI+GLC  G +++A+  +   LD    PD + Y  +I+G C +G
Sbjct: 443 EMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSG 502

Query: 182 RPTEAMQLYDSMLRNG----------IMPDGLLLS 206
                ++L+  ML +G          ++ DGLLL+
Sbjct: 503 MVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLA 537



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 105/207 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++   +  A KLFG +  +G  P   TYN ++ G     R   A+ +  ++    + P 
Sbjct: 253 MLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPG 312

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++D   + GR+ DA  +  +M   G   N   YS +I G+ KS  +  A  V+E
Sbjct: 313 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWE 372

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + + PN+V YS +I GL   G M EA   F   + +   P+++TY  +I+GY K G
Sbjct: 373 AMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIG 432

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + A+ +++ M+  G +P+ +  S L
Sbjct: 433 DTSRALSVWEEMIGAGCVPNAVSYSIL 459



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 9/214 (4%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA+ +  ++   G+ P ++TY  ++ G     R+ +A ++ E++    L  N   ++ +I
Sbjct: 296 AAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVI 355

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             FCK G +D A  ++  M+    + NVV YS +I G      M  A  ++ EM  +  +
Sbjct: 356 TGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCA 415

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           PNI++Y  +I G  K G    AL  +   +    +P+ V+Y+ILI G C  GR  +AM +
Sbjct: 416 PNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMV 475

Query: 190 YDSMLRNGIMPD---------GLLLSTLADYNLQ 214
           +  ML  G  PD         GL +S + D  L+
Sbjct: 476 WKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLR 509



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK++  +    + P+++ Y+ +I G  +  ++ EA  LF ++   +  PN I
Sbjct: 360 KSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNII 419

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I  + K G    A  ++ +M+  G   N V+YS LI+G      +K A  V++ M
Sbjct: 420 TYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHM 479

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGR 182
            +   +P+ ++Y+ +I GLC  G+++  L  F+  L   H  PDV++Y +L+ G   A  
Sbjct: 480 LDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKD 539

Query: 183 PTEAMQLYDSMLRNGIMPD 201
              AM L + ML  G  PD
Sbjct: 540 LPRAMDLLNRMLDQGCDPD 558



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 1/170 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++      P+IITY +II GY  +     A+ ++E++      PN+++++ILI+  C
Sbjct: 405 LFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLC 464

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-YEEMCENNISPNI 132
             GR+ DA M++  ML++G   + + Y+ +I G   S  +     + Y+ +   +  P++
Sbjct: 465 NVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDV 524

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +SY++L+DGL     +  A+   +  LD    PD VT  I +R +    R
Sbjct: 525 ISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGER 574



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 35/230 (15%)

Query: 7   HLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC---------- 55
           +LD AL++  ++     L PD  TY+T++       R+D+AV L  ++            
Sbjct: 188 YLDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVAAEAFN 247

Query: 56  ---------------------VQLK---PNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                                +QLK   P + T+ +L+      GR   A  +  +M  +
Sbjct: 248 PVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMERE 307

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G    V+TY  ++DG  +   +K A+ V EEM  N ++ N   YS +I G CK G ++ A
Sbjct: 308 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCA 367

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           L  +   + + + P+VV Y+ +I G    G+ TEA  L+  M+ +   P+
Sbjct: 368 LKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPN 417



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 9/194 (4%)

Query: 23  LEPDIITYNTIICGYCSL-------NRLDEAVQ-LFEKLTCVQLKPNSITFTILIDAFCK 74
           L P ++++N ++   CS          LD A++ L E +    L P+  T++ ++ A   
Sbjct: 162 LAPTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALAD 221

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            GR+DDA  +  +M+  G  A    ++ ++    ++ ++K A  ++  M      P   +
Sbjct: 222 AGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTAT 280

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y++L+ GL   G    A+          ++P V+TY  ++ G  + GR  +A ++ + M 
Sbjct: 281 YNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEME 340

Query: 195 RNGIMPDGLLLSTL 208
           RNG+  +  + ST+
Sbjct: 341 RNGLAWNEFVYSTV 354


>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 412

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 111/197 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +F  ++ RG+  ++ +YN +I G+C +   DEA+ LFE++ C +L P+ +T+ 
Sbjct: 185 EVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYN 244

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK G++  A  +  +M ++G   +++TYS L+D   K+  +  A  + + + + 
Sbjct: 245 SLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQ 304

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN+ +Y+ILIDGLCK G +E+A   F   L       V TY ++I G+C  G   EA
Sbjct: 305 GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 364

Query: 187 MQLYDSMLRNGIMPDGL 203
           + L   M  N   P+ L
Sbjct: 365 LALLSKMKDNSCFPNAL 381



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 107/191 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ LF ++  R L PD++TYN++I G C   ++  A++L +++      P+ IT++ L
Sbjct: 222 DEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSL 281

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DA CK  ++D A  +   + ++G + N+ TY+ LIDG  K   ++ A +++E++     
Sbjct: 282 LDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 341

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +  + +Y+++I G C +GL +EAL       DN   P+ +TY I+IR         +A  
Sbjct: 342 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAEN 401

Query: 189 LYDSMLRNGIM 199
           L   M+  G++
Sbjct: 402 LLREMITRGLL 412



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 109/193 (56%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E ++  A  +   +  +G+ P+ +TY++++ GYC +N ++ A  +F  ++   +  N  +
Sbjct: 148 EGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 207

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + I+I+ FCK    D+A  +F +M  +    +VVTY+ LI+G  KS  +  A  + +EM 
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH 267

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +    P+I++YS L+D LCK   +++A+       D  + P++ TY ILI G CK GR  
Sbjct: 268 DRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLE 327

Query: 185 EAMQLYDSMLRNG 197
           +A  +++ +L  G
Sbjct: 328 DAHNIFEDLLVKG 340



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 82/141 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  ALKL  ++ DRG  PDIITY++++   C  +++D+A+ L + L    ++PN
Sbjct: 250 LCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPN 309

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILID  CK GR++DA  +F  +L KG    V TY+ +I G+        A  +  
Sbjct: 310 MYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLS 369

Query: 122 EMCENNISPNIVSYSILIDGL 142
           +M +N+  PN ++Y I+I  L
Sbjct: 370 KMKDNSCFPNALTYEIIIRSL 390



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 6/139 (4%)

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           EG + +A  + + M+++G   N VTYS L+DGY     + +A  ++  M    ++ N+ S
Sbjct: 148 EGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 207

Query: 135 YSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           Y+I+I+G CK  + +EA+  F   HC     L+PDVVTY  LI G CK+G+ + A++L D
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHC---RKLIPDVVTYNSLINGLCKSGKISYALKLVD 264

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M   G  PD +  S+L D
Sbjct: 265 EMHDRGQPPDIITYSSLLD 283



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 92/166 (55%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           EA  +   +    + PN++T++ L+D +C    +++A  +FS M  +G  ANV +Y+ +I
Sbjct: 153 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 212

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           +G+ K +    A +++EEM    + P++V+Y+ LI+GLCK G +  AL       D    
Sbjct: 213 NGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQP 272

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           PD++TY+ L+   CK  +  +A+ L  ++   GI P+    + L D
Sbjct: 273 PDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILID 318



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +F  L  +G    + TY  +I G+C+    DEA+ L  K+      PN
Sbjct: 320 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++T+ I+I +       D A  +  +M+ +G
Sbjct: 380 ALTYEIIIRSLFDNDENDKAENLLREMITRG 410


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++  ++   G+ P+  TY +++ G+CS  +L EA++  EK+    ++PN
Sbjct: 243 LCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPN 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++  +D  CK GR  +A  +F  M+++G K ++ TYS L+ GY     +     +++
Sbjct: 303 VVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFD 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++++ P+   ++ LI    K+G ++EA+  F       L P+ VTY+ LI GYCK  
Sbjct: 363 LMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKIT 422

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A+ L+  M+ NG+ P+
Sbjct: 423 RMENALALFQEMVSNGVSPN 442



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL----FEKLTCVQLKPNS 62
            LD      G +  +G   + I +N ++ G C+  R D+A+ +      +L+CV   PN 
Sbjct: 105 RLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCV---PNV 161

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + TI++   C E R  +A  +   M + G     NVV+YS +IDG  K  +   A+  Y
Sbjct: 162 FSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATY 221

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  I PN+V YS +I  LCK   M++A+      + N + P+  TY  L+ G+C +
Sbjct: 222 REMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSS 281

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           G+ TEA++  + M  NG+ P+ +  S+  DY
Sbjct: 282 GQLTEAIKFLEKMCSNGVEPNVVTYSSFMDY 312



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           L  E     AL+L   + D G    P++++Y+T+I G       D+A   + ++   ++ 
Sbjct: 171 LCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRIL 230

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN + ++ +I A CK   MD A  +  +M++ G   N  TY+ L+ G+  S  +  A   
Sbjct: 231 PNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKF 290

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E+MC N + PN+V+YS  +D LCK G   EA   F   +   L PD+ TY+ L+ GY  
Sbjct: 291 LEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAI 350

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   E   L+D M+++ + PD  + +TL
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTL 379



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 91/150 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +  RGL+PDI TY++++ GY     L E   LF+ +    ++P+
Sbjct: 313 LCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPD 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F  LI A  K+G++D+A ++FSKM ++G K N VTYS LI+GY K   M++A  +++
Sbjct: 373 HYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQ 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           EM  N +SPN ++Y+I++ GL + G    A
Sbjct: 433 EMVSNGVSPNFITYNIMLQGLFRTGRTATA 462



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 7/204 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           AL +F +L  RG+   I + N  +      N    AV  F ++       + P   T+ I
Sbjct: 37  ALDVFDELLRRGIGAPIRSLNGALADVARDNPA-AAVSRFNRMARAGASMVTPTVHTYGI 95

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCEN 126
           LI   C  GR+D        +++KG +   + ++ L+ G    +    A D V   M E 
Sbjct: 96  LIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTEL 155

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN--HLLPDVVTYAILIRGYCKAGRPT 184
           +  PN+ S++I++ GLC     +EAL   H   D+    LP+VV+Y+ +I G  K G P 
Sbjct: 156 SCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPD 215

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +A   Y  ML   I+P+ ++ S++
Sbjct: 216 KAYATYREMLDRRILPNVVIYSSI 239



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 57/91 (62%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL+P+ +TY+T+I GYC + R++ A+ LF+++    + PN I
Sbjct: 385 KQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFI 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPK 94
           T+ I++    + GR   A   + ++++ G K
Sbjct: 445 TYNIMLQGLFRTGRTATAKEFYVQIIKSGKK 475


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 113/211 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A+ L  ++  +G  PDI +YNTII   C+  +++EA  +FE L    +  N
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +I A  ++GR  DA  +  +M+  G   +VV+Y+ LI    K  N+  +  + E
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I PN VSY+ILI  LCK   + +AL      L+  L PD+VTY  LI G CK G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
               A+ L + +    + PD +  + L  ++
Sbjct: 606 WMHAALNLLEKLHNENVHPDIITYNILISWH 636



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  L  A +L+  +  +G +PD  TY+ ++ G C L R+  AV+L  ++      PN 
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNV 381

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+TI++ +FCK G  DD   +  +M  KG   N   Y+ +I    K   M  A  + +E
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M     +P+I SY+ +I  LC    MEEA + F   L+  ++ + +TY  +I    + GR
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 501

Query: 183 PTEAMQLYDSMLRNG-----IMPDGLLLSTLADYNLQSS 216
             +A++L   M+ +G     +  +GL+ +   D N+  S
Sbjct: 502 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + +A++L  ++  +G  P+++TY  ++  +C     D+   L E+++   L  N
Sbjct: 356 LCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 62  SITFTILIDAFCKEGRMDDA-----------------------------------TMMFS 86
           S  +  +I A CK+GRMD+A                                     MF 
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            +LE+G  AN +TY+ +I    +    + A  + +EM  +  S ++VSY+ LI  +CK G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            ++ +L       +  + P+ V+Y ILI   CK  R  +A++L   ML  G+ PD +  +
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 207 TL 208
           TL
Sbjct: 596 TL 597



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 90/150 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++     A++L  ++   G   D+++YN +I   C    +D ++ L E++    +KPN
Sbjct: 496 LLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPN 555

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++ ILI   CKE R+ DA  +  +ML +G   ++VTY+ LI+G  K   M +A ++ E
Sbjct: 556 NVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 615

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           ++   N+ P+I++Y+ILI   CK  L+++A
Sbjct: 616 KLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  + G++     E +++ +NT+I G  +  +L EA +L+E +     +P++ T++IL
Sbjct: 297 DEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   CK GR+  A  +  +M +KG   NVVTY+ ++  + K+        + EEM    +
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           + N   Y+ +I  LCK G M+EA+            PD+ +Y  +I   C   +  EA  
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +++++L  G++ +G+  +T+    L+    Q+
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQD 504



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 4/188 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++   G   D+ T++ ++ G C L R+ EA +L +++      P  +T+  L+ 
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  + D+A  M  ++    P+ NVV ++ +I G      +  A ++YE M      P
Sbjct: 289 GLCRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +YSIL+ GLCK G +  A+            P+VVTY I++  +CK G   +   L 
Sbjct: 345 DAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404

Query: 191 DSMLRNGI 198
           + M   G+
Sbjct: 405 EEMSAKGL 412



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 33/229 (14%)

Query: 5   ECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +CH DA L L+ ++  R  + P   T+       C L R +EA+ L   +      P+++
Sbjct: 153 DCHADA-LALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAV 211

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I A C +G + +A  + ++ML  G  A+V T+  ++ G      ++ A  + + M
Sbjct: 212 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 271

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLL------------- 164
                 P +++Y  L+ GLC+    +EA      +   +  L N ++             
Sbjct: 272 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEAT 331

Query: 165 ------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                       PD  TY+IL+ G CK GR + A++L   M + G  P+
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPN 380


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 115/204 (56%), Gaps = 5/204 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +DAA K+  +++ +G  PD +++ TI+ G C L R++EA     +   VQ   N++   
Sbjct: 119 RVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAV--- 175

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             + A C E RM +   + ++M+++G + NVVTY+ ++D + K++ ++ A  +   M   
Sbjct: 176 --VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM 233

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +PN+++++ L+ G  + G + +AL  +H  +D    P  ++Y +LIRG C  G    A
Sbjct: 234 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 293

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +  ++SM RN ++P+    STL D
Sbjct: 294 LDFFNSMKRNALLPNATTYSTLVD 317



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 106/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +     +  ++  RGL+P+++TY TI+  +C    L  A  +  ++  +   PN
Sbjct: 179 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 238

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT L+  F ++G++ DA  M+  M+++G   + ++Y+ LI G     ++K A D + 
Sbjct: 239 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 298

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N + PN  +YS L+DG    G ++ A+  ++    +   P+VV Y  +I   CK  
Sbjct: 299 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 358

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  L D ML +   P+ +  +TL
Sbjct: 359 MFDQAESLIDKMLMDNCPPNTVTFNTL 385



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 94/187 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL ++  + D G  P  I+YN +I G C +  L  A+  F  +    L PN+ T++ L+D
Sbjct: 258 ALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVD 317

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F   G +D A +++++M   G K NVV Y+ +ID   K      A  + ++M  +N  P
Sbjct: 318 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP 377

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++ LI  LC  G +  AL  FH    N   P+  TY  L+ G  + G   +A  + 
Sbjct: 378 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMV 437

Query: 191 DSMLRNG 197
             ML NG
Sbjct: 438 IEMLNNG 444



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ ++ ++   G +P+++ Y  +I   C     D+A  L +K+      PN++TF  
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 384

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+  A  +F  M   G   N  TY+ L+ G F+  N K AF +  EM  N 
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 444

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ +I+ LC+  + + A+      +   + PD  T+  +I  YCK G+ + A 
Sbjct: 445 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 504

Query: 188 QLYDSM 193
            L   M
Sbjct: 505 CLLGQM 510



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 93/201 (46%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL  F  +    L P+  TY+T++ G+ +   LD A+ ++ ++     KPN + +T 
Sbjct: 290 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 349

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+   D A  +  KML      N VT++ LI        +  A +V+  M  N 
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +Y+ L+ GL + G  ++A       L+N     +VTY  +I   C+      AM
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 469

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M+  GI PD    + +
Sbjct: 470 LLLGRMMVQGIQPDAFTFNAI 490



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 12/207 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+   D A  L  ++      P+ +T+NT+I   C   R+  A+ +F  +      P
Sbjct: 353 VLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP 412

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+  L+    +EG   DA  M  +ML  G + ++VTY+ +I+   +    K A  + 
Sbjct: 413 NDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLL 472

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILI 174
             M    I P+  +++ +I   CK G +  A      + A +C        +VV Y ILI
Sbjct: 473 GRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCP------RNVVAYTILI 526

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              C  G+ + AM     ML  GI P+
Sbjct: 527 SELCNQGKLSNAMVYLLKMLYEGICPN 553



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L + C    A+ L G++  +G++PD  T+N II  YC   ++  A  L  ++  V    N
Sbjct: 459 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 518

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TILI   C +G++ +A +   KML +G   N  T++ L+   F +        +++
Sbjct: 519 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 578

Query: 122 EMCEN 126
            + E+
Sbjct: 579 YIVED 583



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E +   A  +  ++ + G E  ++TYNT+I   C +     A+ L  ++    ++P+
Sbjct: 424 LFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPD 483

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF  +I A+CKEG++  A  +  +M       NVV Y+ LI        + +A     
Sbjct: 484 AFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 543

Query: 122 EMCENNISPNIVSYSILIDGL 142
           +M    I PN  ++++L+  +
Sbjct: 544 KMLYEGICPNEATWNVLVRAI 564



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 6/178 (3%)

Query: 34  ICGYCSLNRLDEAVQLFEKLTCVQLK-PNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           I  +      D A++ F + + +  + P    +  L+DA  +E  +     ++  M + G
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              NV TY+ LI    ++  + +A  + +EM      P+ VS+  ++ G+CK G +EEA 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                      +P   +Y  ++   C   R  E   + + M++ G+ P+ +  +T+ D
Sbjct: 160 -----GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 212


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 6/209 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++AA  LF ++  RGL PD +TYN++I G+  + RLD+ V  FE++  +  +P+ I
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+ FCK G++      + +M   G K NVV+YS L+D + K   M+ A   Y +M
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ LID  CK G + +A    +  L   +  +VVTY  LI G C A R 
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
            EA +L+  M   G++P+      LA YN
Sbjct: 454 KEAEELFGKMDTAGVIPN------LASYN 476



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L   L+ + ++   GL+P++++Y+T++  +C    + +A++ +  +  V L PN  T+T 
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA CK G + DA  + ++ML+ G + NVVTY+ LIDG   ++ MK A +++ +M    
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ SY+ LI G  K   M+ AL   +      + PD++ Y   I G C   +   A 
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            + + M   GI  + L+ +TL D   +S    E
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 117/215 (54%), Gaps = 1/215 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A +LFG++   G+ P++ +YN +I G+     +D A++L  +L    +KP+ + + 
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             I   C   +++ A ++ ++M E G KAN + Y+ L+D YFKS N      + +EM E 
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +I   +V++ +LIDGLCK  L+ +A+  F+  + D  L  +   +  +I G CK  +   
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           A  L++ M++ G++PD    ++L D N +     E
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K  ++D AL+L  +L  RG++PD++ Y T I G CSL +++ A  +  ++    +K N
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+ +T L+DA+ K G   +   +  +M E   +  VVT+  LIDG  K++ +  A D + 
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +  +  +  N   ++ +IDGLCK   +E A   F   +   L+PD   Y  L+ G  K 
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           G   EA+ L D M   G+  D L  ++L 
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLV 690



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 112/212 (52%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI    L+ A++ F ++    + P   + N ++  +  L + D+  + F+ +     +P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
              T+ I+ID  CKEG ++ A  +F +M  +G   + VTY+ +IDG+ K   +      +
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +    P++++Y+ LI+  CK G +   L  +     N L P+VV+Y+ L+  +CK 
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           G   +A++ Y  M R G++P+    ++L D N
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412



 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 98/190 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+K +  +   GL P+  TY ++I   C +  L +A +L  ++  V ++ N +
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID  C   RM +A  +F KM   G   N+ +Y+ LI G+ K++NM  A ++  E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+++ Y   I GLC    +E A    +   +  +  + + Y  L+  Y K+G P
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558

Query: 184 TEAMQLYDSM 193
           TE + L D M
Sbjct: 559 TEGLHLLDEM 568



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 96/186 (51%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    ++ +      L  L+EA+Q F K+   ++ P + +   L+  F K G+ DD    
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+  G +  V TY+ +ID   K  ++++A  ++EEM    + P+ V+Y+ +IDG  K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +++ +  F    D    PDV+TY  LI  +CK G+    ++ Y  M  NG+ P+ + 
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 205 LSTLAD 210
            STL D
Sbjct: 370 YSTLVD 375



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 102/190 (53%), Gaps = 1/190 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTILI 69
            L L  ++ +  +E  ++T+  +I G C    + +AV  F +++    L+ N+  FT +I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D  CK+ +++ AT +F +M++KG   +   Y+ L+DG FK  N+  A  + ++M E  + 
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++++Y+ L+ GL     +++A       +   + PD V    +++ + + G   EA++L
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740

Query: 190 YDSMLRNGIM 199
              ++++ ++
Sbjct: 741 QSYLMKHQLL 750



 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 46/91 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++AA  LF Q+  +GL PD   Y +++ G      + EA+ L +K+  + +K +
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            + +T L+       ++  A     +M+ +G
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 109/199 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A   F   T   L  D++ YN +I GY  L+ + EA+QL+ K+    + P+
Sbjct: 491 LFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ FC+ G + +A  M   +  KG   +VVTY+ L++ Y +  NM+  F    
Sbjct: 551 VVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N + P  V+Y++LI GLC++  M E+L          LLPD VTY  +I+ +CK  
Sbjct: 611 EMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGK 670

Query: 182 RPTEAMQLYDSMLRNGIMP 200
             T+A+QLY+ ML +   P
Sbjct: 671 EITKALQLYNMMLLHNCDP 689



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 110/203 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A K+  ++  +GL PD++TY T+ICG+C +  ++EA++L ++      K N I + +
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CK GR+++A  +F +M     + + + YS LI G  K   ++ A+ +YE+M    
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +   ++ GL K G + EA   F       L+ DVV Y I+I GY +     EAM
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           QLY  M+  GI P  +  +TL +
Sbjct: 537 QLYYKMIERGITPSVVTFNTLIN 559



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 35/237 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ ALKL  +   RG + ++I YN ++   C + R++EA+ LF+++  ++L+P+ I ++
Sbjct: 391 NIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYS 450

Query: 67  ILIDAFCKEGRMDDATMMFSKML--EKGPK------------------------------ 94
           ILI   CKEG +  A  ++ +M    K P                               
Sbjct: 451 ILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 95  ---ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               +VV Y+ +IDGY +   +  A  +Y +M E  I+P++V+++ LI+G C+RG + EA
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                      L+P VVTY  L+  YC+ G   E       M  N ++P  +  + L
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVL 627



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L K   ++ AL LF ++    LEPD I Y+ +I G C    +  A QL+E++        
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 54  ---------------------------TCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                                      T + L  + + + I+ID + +   + +A  ++ 
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYY 540

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           KM+E+G   +VVT++ LI+G+ +  ++  A  + E +    + P++V+Y+ L++  C+ G
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M+E  +  H    N ++P  VTY +LI+G C+  +  E++QL + M   G++PD +  +
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 207 TL 208
           T+
Sbjct: 661 TI 662



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 95/186 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A   F  +   GL  D  +YN ++ G C    +DEA+   + +    ++P+ +T+  
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L   F   G M  A  +  KML +G   ++VTY+ LI G+ +  N++ A  + +E     
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N++ Y++L+  LCK G +EEAL  F       L PD + Y+ILI G CK G    A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 188 QLYDSM 193
           QLY+ M
Sbjct: 467 QLYEQM 472



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 95/189 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+   +  +GL P ++TY T++  YC +  + E      ++    + P  +T+T+LI 
Sbjct: 570 ARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIK 629

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++ +M ++  +   M  KG   + VTY+ +I  + K + +  A  +Y  M  +N  P
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             V+Y +LI+ LC  G +++         D ++     TY  +I+ +C  G+ ++A+  +
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYF 749

Query: 191 DSMLRNGIM 199
           + ML  G +
Sbjct: 750 NQMLAKGFV 758



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 99/190 (52%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           +++ + P I++ NTI+  +C +  +D A   F  +    L  +S ++ IL+   C  G M
Sbjct: 263 SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSM 322

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           D+A      M + G + +VVTY+ L  G+     M  A  V ++M    ++P++V+Y+ L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I G C+ G +EEAL      L      +V+ Y +L+   CK GR  EA+ L+D M    +
Sbjct: 383 ICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRL 442

Query: 199 MPDGLLLSTL 208
            PD ++ S L
Sbjct: 443 EPDFIVYSIL 452



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 91/171 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L+ ++ +RG+ P ++T+NT+I G+C    L EA ++ E +    L P+ +T+T L++
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+C+ G M +      +M         VTY+ LI G  +   M  +  + E M    + P
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLP 654

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           + V+Y+ +I   CK   + +AL  ++  L ++  P  VTY +LI   C  G
Sbjct: 655 DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFG 705



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 93/198 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  +L+L   +  +GL PD +TYNTII  +C    + +A+QL+  +      P 
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPT 690

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LI+A C  G + D   M   + ++       TY  +I  +     +  A   + 
Sbjct: 691 QVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFN 750

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M       +I  YS +I+ LCKRGL+ EA Y F   L   + PD      ++  + + G
Sbjct: 751 QMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810

Query: 182 RPTEAMQLYDSMLRNGIM 199
             +   +    ++++G +
Sbjct: 811 NNSSVFEFLAMVVKSGFI 828



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 85/177 (48%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P  +TY  +I G C  N++ E++QL E +    L P+S+T+  +I  FCK   +  A  +
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           ++ ML        VTY  LI+      ++K    +   + + NI+    +Y  +I   C 
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCA 738

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +G + +AL  F+  L    +  +  Y+ +I   CK G  TEA   +  ML  G+ PD
Sbjct: 739 KGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 1/191 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H D    ++ ++   G      T + +I G C  ++L++A+        V + P+ ++  
Sbjct: 217 HTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSIN 275

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++  FCK G +D A   F  M++ G   +  +Y+ L+ G   + +M  A    ++M ++
Sbjct: 276 TIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ L  G    GLM  A       L   L PD+VTY  LI G+C+ G   EA
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 187 MQLYDSMLRNG 197
           ++L    L  G
Sbjct: 396 LKLRQETLSRG 406



 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 43/186 (23%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA---F 117
           N + + +L  A+ +   + DA  + +KM +   +A+V TY+ L+       NM+     +
Sbjct: 169 NGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLL------HNMRHTDIMW 222

Query: 118 DVYEE-------------------MCENN---------------ISPNIVSYSILIDGLC 143
           DVY E                   +CE +               + P+IVS + ++   C
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFC 282

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K GL++ A   F   + N LL D  +Y IL+ G C AG   EA+   D M ++G+ PD +
Sbjct: 283 KVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVV 342

Query: 204 LLSTLA 209
             +TLA
Sbjct: 343 TYNTLA 348


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KL  ++ D+G +PD++TYN +I G C   RLDEA++    +     +PN I
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++ + C  GR  DA    ++M+ KG   +VVT++ LI+   +   +  A DV E+M
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++  +PN +SY+ L+  LCK   ME A+      +     PD+VTY  L+   CK G+ 
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+++ + +   G  P  +  +T+ D
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVID 465



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 111/201 (55%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++   L D G  PD+ITYN +I GYC    +  A+QL ++++   + P+ +T+  ++ 
Sbjct: 164 ATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILR 220

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++ +A  +  + +++    +V+TY+ LI+   K   +  A  + +EM +    P
Sbjct: 221 TLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKP 280

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y++LI+G+CK G ++EA+   +        P+V+T+ I++R  C  GR  +A +  
Sbjct: 281 DVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M+R G  P  +  + L ++
Sbjct: 341 AEMIRKGCSPSVVTFNILINF 361



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 106/206 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A++    +   G +P++IT+N I+   CS  R  +A +   ++      P+ +
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM + G   N ++Y+ L+    K + M+ A +  + M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ L+  LCK G ++ A+   +        P ++TY  +I G  K G+ 
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
            +A++L D M   G+ PD +  STL 
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLV 499



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 1/188 (0%)

Query: 17  QLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
           QL DR  + PD++TYNTI+   C   +L EA+++ ++    +  P+ IT+TILI+A CKE
Sbjct: 201 QLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKE 260

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
             +  A  +  +M +KG K +VVTY+ LI+G  K   +  A      M      PN++++
Sbjct: 261 SGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITH 320

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           +I++  +C  G   +A       +     P VVT+ ILI   C+ G    A+ + + M +
Sbjct: 321 NIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ 380

Query: 196 NGIMPDGL 203
           +G  P+ L
Sbjct: 381 HGCTPNSL 388



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+   K    +  RG  PDII   ++I G C   +  +A ++ E L      P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +LI  +CK G +  A  +  +M       +VVTY+ ++     S  +K A +V +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              +    P++++Y+ILI+  CK   + +A+       D    PDVVTY +LI G CK G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++  + M   G  P+
Sbjct: 297 RLDEAIRFLNHMPSYGCQPN 316



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 100/198 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++    +  RG  PDI+TYNT++   C   ++D AV++  +L      P 
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  +ID   K G+ DDA  +  +M  KG K +++TYS L+ G  +   +  A   + 
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E  + PN ++Y+ ++ GLCK      A+      +     P   +Y ILI G    G
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576

Query: 182 RPTEAMQLYDSMLRNGIM 199
              EA++L + +   G++
Sbjct: 577 LAKEALELLNELCSRGVV 594



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 106/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+++  +   R   PD+ITY  +I   C  + + +A++L +++     KP+ +T+ +
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+  CKEGR+D+A    + M   G + NV+T++ ++     +     A     EM    
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++V+++ILI+ LC++GL+  A+        +   P+ ++Y  L+   CK  +   A+
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +  D M+  G  PD +  +TL
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTL 428



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 101/190 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +  ++   G  P+ ++YN ++   C   +++ A++  + +      P+ +T+  L+ 
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK+G++D A  + +++  KG    ++TY+ +IDG  K      A  + +EM    + P
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I++YS L+ GL + G ++EA+  FH   +  + P+ +TY  ++ G CKA +   A+   
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550

Query: 191 DSMLRNGIMP 200
             M+  G  P
Sbjct: 551 AYMVARGCKP 560



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 102/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K   ++  +G  P ++T+N +I   C    +  A+ + EK+      PNS+++  L+ 
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK+ +M+ A      M+ +G   ++VTY+ L+    K   +  A ++  ++     SP
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G  ++A+          L PD++TY+ L+ G  + G+  EA+  +
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515

Query: 191 DSMLRNGIMPDGLLLSTL 208
             +   G+ P+ +  +++
Sbjct: 516 HDLEEMGVKPNAITYNSI 533



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G +++       M+ +G   +++  + LI G  K+     A  V E + ++   P+++
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           +Y++LI G CK G +  AL      LD   + PDVVTY  ++R  C +G+  EAM++ D 
Sbjct: 182 TYNVLISGYCKTGEIGSALQL----LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSG 217
            ++    PD +  + L +   + SG
Sbjct: 238 QMQRECYPDVITYTILIEATCKESG 262


>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+++F ++   G  P I +YNT+I GYC+   L+  ++L   +    ++P+ +
Sbjct: 326 KWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDV 385

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+ FC+ G++ +A  +FS+M       N +TY+ LI+GY +  N +    +++EM
Sbjct: 386 TFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEM 445

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I  +I++Y+ LI GLC  G  ++A Y        +L+P+  T++ LI G C     
Sbjct: 446 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNS 505

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTL 208
             A QLY SM+R+G  P+     +L+ST 
Sbjct: 506 ERAFQLYKSMIRSGCHPNYHTFKMLISTF 534



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 105/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +F Q+ D G  P + + N  I    SL R D A+  + ++   ++ PN  T  +
Sbjct: 260 LRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNM 319

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++ AFCK G+++ A  +F +M   G    + +Y+ LI GY     + S   +   M +N 
Sbjct: 320 VMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG 379

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+++ LI+G C+ G + EA   F     N ++P+ +TY  LI GY + G      
Sbjct: 380 VRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 439

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+D MLRNGI  D L  + L
Sbjct: 440 RLHDEMLRNGIKADILTYNAL 460



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 1/213 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++ +KL   +   G+ PD +T+NT+I G+C   +L EA ++F ++    + PN+IT+  
Sbjct: 365 LNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 424

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ + + G  +    +  +ML  G KA+++TY+ LI G       K A  + +E+   N
Sbjct: 425 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 484

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  ++S LI G C R   E A   +   + +   P+  T+ +LI  +CK      A+
Sbjct: 485 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAV 544

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++   M    I PD   LS L    L  SG +E
Sbjct: 545 EVVREMSERSIAPDSDTLSELCR-GLWLSGKEE 576



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 99/208 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A K+F ++    + P+ ITYNT+I GY  +   +   +L +++    +K + +T+  
Sbjct: 400 LHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNA 459

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C EGR   A  +  ++  +    N  T+S LI G    +N + AF +Y+ M  + 
Sbjct: 460 LILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSG 519

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  ++ +LI   CK    + A+       +  + PD  T + L RG   +G+   A+
Sbjct: 520 CHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELAL 579

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           +L   M    +MP+G   S   ++  +S
Sbjct: 580 KLCKEMEMKHLMPEGFDKSKTINFRAES 607



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E     A  L  +L    L P+  T++ +I G C     + A QL++ +      PN  T
Sbjct: 467 EGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHT 526

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F +LI  FCK    D A  +  +M E+    +  T S L  G + S   + A  + +EM 
Sbjct: 527 FKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEME 586

Query: 125 ENNISP 130
             ++ P
Sbjct: 587 MKHLMP 592


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++  A  L+ Q+ ++ + P +   N++I G+  +   +EA +LF++     +  N  
Sbjct: 396 KNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIF 454

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   CKEG+M +AT ++ KML+KG     V+Y+ +I G+ +  N+  A  V+ +M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN+++YSIL+DG  K G  E A Y F   +D +++P   TY I I G CK GR 
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +EA  +    +  G +P  L  +++ D
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMD 601



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 122/219 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE  + +AL  + ++ + G+ P++ITY T+I G+C  N  D A+++  ++    L+ +
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LID FCK+  ++ A+ +FS++L+ G   N V Y+ LI GY    NM++A ++ +
Sbjct: 663 IAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQK 722

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    IS ++ +Y+ LIDGL K G +  AL  +       ++PD++ Y +LI G C  G
Sbjct: 723 RMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKG 782

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   A ++   M R+ I P+  + + L   + ++   QE
Sbjct: 783 QLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQE 821



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 107/183 (58%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           +I TYN+++   C   ++ EA  L++K+    L P  +++  +I   C++G +D A  +F
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           S ML+ G K NV+TYS L+DGYFK+ + + AF V++ M + NI P+  +Y+I I+GLCK 
Sbjct: 512 SDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKV 571

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G   EA       ++   +P  +TY  ++ G+ K G  + A+  Y  M  +G+ P+ +  
Sbjct: 572 GRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY 631

Query: 206 STL 208
           +TL
Sbjct: 632 TTL 634



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 113/215 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  + D ALK+  ++ ++GLE DI  Y  +I G+C    ++ A  LF +L    L PNS+
Sbjct: 640 KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSV 699

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  LI  +     M+ A  +  +ML +G   ++ TY+ LIDG  K   +  A D+Y EM
Sbjct: 700 IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+I+ Y++LI+GLC +G +E A         + + P+V  Y  LI G+ KAG  
Sbjct: 760 SAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNL 819

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            EA +L++ ML  G+ P+      L +  ++   S
Sbjct: 820 QEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNS 854



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ +LD A  +F  + D GL+P++ITY+ ++ GY      + A  +F+++    + P+  
Sbjct: 500 RQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF 559

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I I+  CK GR  +A  M  K +EKG     +TY+ ++DG+ K  ++ SA   Y EM
Sbjct: 560 TYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREM 619

Query: 124 CENNISPNIVSYSILI-----------------------------------DGLCKRGLM 148
           CE+ +SPN+++Y+ LI                                   DG CK+  +
Sbjct: 620 CESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDI 679

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E A + F   LD  L P+ V Y  LI GY        A+ L   ML  GI  D    +TL
Sbjct: 680 ETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTL 739

Query: 209 AD 210
            D
Sbjct: 740 ID 741



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +  +  ++G  P  +TYN+I+ G+     +  A+  + ++    + PN IT+T LI+
Sbjct: 577 AQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLIN 636

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK    D A  M ++M  KG + ++  Y  LIDG+ K Q++++A  ++ E+ +  +SP
Sbjct: 637 GFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSP 696

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V Y+ LI G      ME AL      L   +  D+ TY  LI G  K GR   A+ LY
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   GI+PD ++ + L
Sbjct: 757 SEMSAKGIIPDIIIYTVL 774



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 1/208 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+ ++  AL+L  ++   G++ +++   T++ GYC  ++L  A++ F+K+      PN 
Sbjct: 325 VKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNR 384

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+ +LI+  CK G M  A  ++++M  K     V   + LI G+ K ++ + A  +++E
Sbjct: 385 VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+ NI +Y+ L+  LCK G M EA   +   LD  L P  V+Y  +I G+C+ G 
Sbjct: 445 AVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGN 503

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  ++  ML  G+ P+ +  S L D
Sbjct: 504 LDMAASVFSDMLDCGLKPNVITYSILMD 531



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 100/189 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+ + + A K F +   RG++ D   Y+ +I  +C    ++ A  L + +      P+ 
Sbjct: 255 LKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSE 314

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TFT +I A  K+G M +A  +  +M+  G + NVV  + L+ GY K   + SA + +++
Sbjct: 315 GTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDK 374

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M EN  SPN V+Y++LI+  CK G M +A   +    + ++ P V     LIRG+ K   
Sbjct: 375 MNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVES 434

Query: 183 PTEAMQLYD 191
             EA +L+D
Sbjct: 435 REEASKLFD 443



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  A +++ ++  +G+  D  T + ++      N  +EA + F +     +K +
Sbjct: 219 LVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLD 278

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  ++I+I AFCK   ++ A  +   M +KG   +  T++ +I    K  NM  A  + +
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  N+V  + L+ G CK+  +  AL  F    +N   P+ VTYA+LI   CK G
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              +A  LY  M    I P   ++++L    L+    +E
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREE 437



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK   L+ A+  F +L +  + P I   N ++      + + EA +++EK+    +  + 
Sbjct: 185 IKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDC 244

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T  I++ A  K+   ++A   F +   +G K +   YS +I  + K+ +++ A  + ++
Sbjct: 245 FTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKD 304

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +    P+  +++ +I    K+G M EAL      +   +  +VV    L++GYCK  +
Sbjct: 305 MRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDK 364

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              A++ +D M  NG  P+ +  + L ++
Sbjct: 365 LVSALEFFDKMNENGPSPNRVTYAVLIEW 393



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 60/111 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  L  AL L+ +++ +G+ PDII Y  +I G C   +L+ A ++  ++    + PN
Sbjct: 743 LLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPN 802

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
              +  LI    K G + +A  + ++ML+KG   N  TY  LI+G  K  N
Sbjct: 803 VPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 82/186 (44%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
            + DI  YN ++  Y   N+L++A+  F +L    + P       L+ A  K   + +A 
Sbjct: 170 FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAR 229

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            ++ KM+ KG   +  T   ++    K  N + A   + E     +  +  +YSI+I   
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAF 289

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK   +E A        D   +P   T+  +I    K G   EA++L D M+  G+  + 
Sbjct: 290 CKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNV 349

Query: 203 LLLSTL 208
           ++ +TL
Sbjct: 350 VVATTL 355


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 108/197 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  H+  A++    + + G +PDI+TYNT+I G C   ++ EA QL E+     L PN  
Sbjct: 302 KHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF 361

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T LI A+CK+G  D A+    +M E+G K ++VTY  L+ G   +  +  A  + E+M
Sbjct: 362 SYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM 421

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+   Y+IL+ GLCK+  +  A       LD  +LPD   YA L+ G+ + G  
Sbjct: 422 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 481

Query: 184 TEAMQLYDSMLRNGIMP 200
            EA +L++  +  G+ P
Sbjct: 482 DEARKLFELTIEKGMNP 498



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 11/229 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D A     ++T+RG +PD++TY  ++ G      +D A+ + EK+    + P++ 
Sbjct: 372 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 431

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + IL+   CK+ ++  A ++ ++ML++    +   Y+ L+DG+ ++ N+  A  ++E  
Sbjct: 432 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 491

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++P IV Y+ +I G CK G+M++A+   +     HL PD  TY+ +I GY K    
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551

Query: 184 TEAMQLYDSMLRNGIMPD------GLLL---STLADYNLQSSGSQEHCI 223
             A +++  M++    P+      GLLL   S  A  N++   S+ HCI
Sbjct: 552 DGAQKMFREMVKMKCKPNVMDGLQGLLLIIPSLFAFANMEC--SELHCI 598



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 95/200 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+   KL      +G  P+II YNT+I GYC    ++ A  LF +L      P 
Sbjct: 195 LCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPT 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+ FCK+G       +  +M  +G   NV  Y+ +ID  +K  ++  A +  E
Sbjct: 255 VETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P+IV+Y+ LI G C+ G + EA      AL   L+P+  +Y  LI  YCK G
Sbjct: 315 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 374

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A      M   G  PD
Sbjct: 375 GYDRASNWLIEMTERGHKPD 394



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+    A  +L  ++  RGL  ++  YNTII        + +AV+  E +     KP+ +
Sbjct: 267 KKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIV 326

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   C++G++ +A  +  + L KG   N  +Y+ LI  Y K      A +   EM
Sbjct: 327 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 386

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P++V+Y  L+ GL   G ++ AL      L+  + PD   Y IL+ G CK  + 
Sbjct: 387 TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL 446

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L   ML   ++PD  + +TL D
Sbjct: 447 PAAKLLLAEMLDQSVLPDAFVYATLVD 473



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D AL +  ++ +RG+ PD   YN ++ G C   +L  A  L  ++    + P+
Sbjct: 405 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 464

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  L+D F + G +D+A  +F   +EKG    +V Y+ +I GY K   MK A     
Sbjct: 465 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 524

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            M + +++P+  +YS +IDG  K+  ++ A   F   +     P+V+
Sbjct: 525 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 50/212 (23%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+I  N+++     L R    +++  K TC           I++   CKEG++++   +
Sbjct: 163 PDVIACNSLLNMLVKLGR----IEIARKFTC-----------IMVKGLCKEGKLEEGRKL 207

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                 +G   N++ Y+ LIDGY K  +M+ A  ++ E+      P + +Y  +I+G CK
Sbjct: 208 IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267

Query: 145 RG--------LME-------EALYAFHCALD-----NHLL---------------PDVVT 169
           +G        LME         +  ++  +D      H++               PD+VT
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           Y  LI G C+ G+ +EA QL +  L  G+MP+
Sbjct: 328 YNTLISGSCRDGKVSEADQLLEQALGKGLMPN 359



 Score = 43.1 bits (100), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 22/140 (15%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           GP  N   YS L+    +S+       V E M    +SP   + SI+I      GL+E+A
Sbjct: 90  GP-INGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKA 148

Query: 152 LYAFHCALDNHL-LPDVVT--------------------YAILIRGYCKAGRPTEAMQLY 190
           L  ++  L  +   PDV+                       I+++G CK G+  E  +L 
Sbjct: 149 LELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLI 208

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           +     G +P+ +  +TL D
Sbjct: 209 EDRWGQGCIPNIIFYNTLID 228


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 113/198 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  LK+  ++  +G E   +TYNTII G     RL++A+ L+  L      P   
Sbjct: 813  KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 872

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K G+M DA  +F++MLE G + N   Y+ L++G+  + N ++   ++E+M
Sbjct: 873  TYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             E  I+P+I SY+ILID LC  G + + L  F    +  L PD++ Y +LI G  K+ R 
Sbjct: 933  VEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERI 992

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ L++ M + GI+P+
Sbjct: 993  EEAVSLFNEMKKKGIIPN 1010



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 109/215 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D  L L  ++  RG++P++ +Y   I       R DEA  +  K+     KP+ +
Sbjct: 218 KKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVV 277

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T T++I   C  GR+ DA  +F KM     K + VTY  L+D    S + +S  +V+  M
Sbjct: 278 THTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAM 337

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + NIVSY+ ++D LC+ G ++EAL  F    +  + P+  +Y  LI G+ KA   
Sbjct: 338 VADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMF 397

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
             A++L++ M   G  P+G       +Y  +S  S
Sbjct: 398 DRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 432



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 11/222 (4%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +    D A  + G++ D G +PD++T+  II   C   RL +A  +F K+     KP
Sbjct: 250 VLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKP 309

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+  L+D     G       +++ M+  G   N+V+Y+ ++D   +   +  A  V+
Sbjct: 310 DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVF 369

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL-----LPDVVTYAILIR 175
           +EM E  +SP   SY+ LI G  K  + + AL  F     NH+      P+  T+ + I 
Sbjct: 370 DEMKEKGMSPEQYSYNSLISGFLKADMFDRALELF-----NHMNACGPSPNGYTHVLFIN 424

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            Y K+G+  +A+Q Y+ M   GI+PD +  +    Y+L  SG
Sbjct: 425 YYGKSGQSLKAIQRYEHMKSKGIVPD-VAAANAVLYSLAGSG 465



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 103/200 (51%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K   +  A  LF ++ + G EP+   YN ++ G+      +   QLFEK+    + P+
Sbjct: 881  LLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPD 940

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++TILID  C  GR++D    F ++ E G + +++ Y+ LIDG  KS+ ++ A  ++ 
Sbjct: 941  IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            EM +  I PN+ +Y+ LI  L K G   EA   +   L     P V TY  LIRGY  +G
Sbjct: 1001 EMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSG 1060

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
                A   Y  M+  G  P+
Sbjct: 1061 STDNAYAAYGQMIVGGCQPN 1080



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 99/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF +    G+     +YN++I G    N +D A  LF ++  +   P+  T+ +++D
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K  R+++   +  +M  KG ++  VTY+ +I G  KS+ ++ A D+Y  +     SP
Sbjct: 810 AMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 869

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y  L+DGL K G M +A   F+  L+    P+   Y IL+ G+  AG      QL+
Sbjct: 870 TPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLF 929

Query: 191 DSMLRNGIMPD 201
           + M+  GI PD
Sbjct: 930 EKMVEQGINPD 940



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 99/201 (49%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + ++++  +   G   +I++Y  ++   C + R+DEA+ +F+++    + P   ++  LI
Sbjct: 329 SVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLI 388

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K    D A  +F+ M   GP  N  T+   I+ Y KS     A   YE M    I 
Sbjct: 389 SGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIV 448

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++ + + ++  L   G +  A   F+      + PD +TY ++I+   KA +  EAM  
Sbjct: 449 PDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNF 508

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+ +G +PD L L++L D
Sbjct: 509 FSDMVESGCVPDVLALNSLID 529



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ E  +D A  LF ++   G  PD  TYN I+       R++E +++ +++     +  
Sbjct: 776 LVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYEST 835

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I    K  R++ A  ++  ++ +G      TY  L+DG  KS  M  A +++ 
Sbjct: 836 YVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFN 895

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    PN   Y+IL++G    G  E     F   ++  + PD+ +Y ILI   C AG
Sbjct: 896 EMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAG 955

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  + +  +  +   G+ PD ++ + L D
Sbjct: 956 RLNDGLCYFRQLHELGLEPDLIVYNLLID 984



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 6/225 (2%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           M+IK C      D A+  F  + + G  PD++  N++I       + +EA QLF KL  +
Sbjct: 491 MMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEM 550

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           +++P + T+  L+    +EG++ +   +  +M       N++TY+ ++D   K+  +  A
Sbjct: 551 KIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCA 610

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D+   M E   +P++ SY+ ++ GL K   +EEA   F C +   L PD  T   ++  
Sbjct: 611 IDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMF-CQMKKILAPDYATLCTILPS 669

Query: 177 YCKAGRPTEAMQ-LYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + K G   EA+  + + +L+ G   D     +L +  L+ +G ++
Sbjct: 670 FVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEK 714



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 98/202 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL +F ++ ++G+ P+  +YN++I G+   +  D A++LF  +      PN  T  
Sbjct: 361 RVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 420

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + I+ + K G+   A   +  M  KG   +V   + ++     S  +  A  V+ E+   
Sbjct: 421 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM 480

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP+ ++Y+++I    K    +EA+  F   +++  +PDV+    LI    K G+  EA
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            QL+  +    I P     +TL
Sbjct: 541 WQLFHKLKEMKIEPTNGTYNTL 562



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 20/228 (8%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A ++F +L   G+ PD ITY  +I      ++ DEA+  F  +      P+ +   
Sbjct: 466 RLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALN 525

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K G+ ++A  +F K+ E   +    TY+ L+ G  +   +K    + EEM   
Sbjct: 526 SLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRT 585

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+++Y+ ++D L K G +  A+   +   +    PD+ +Y  ++ G  K  R  EA
Sbjct: 586 IYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEA 645

Query: 187 MQLY------------------DSMLRNGIMPDGLLLSTLADYNLQSS 216
            +++                   S ++NG+M +   L T+ +Y L++ 
Sbjct: 646 FRMFCQMKKILAPDYATLCTILPSFVKNGLMKEA--LHTVKEYILKAG 691



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 85/158 (53%)

Query: 13   KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
            +LF ++ ++G+ PDI +Y  +I   C+  RL++ +  F +L  + L+P+ I + +LID  
Sbjct: 927  QLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986

Query: 73   CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
             K  R+++A  +F++M +KG   N+ TY+ LI    K+     A  +YEE+      P++
Sbjct: 987  GKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSV 1046

Query: 133  VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             +Y+ LI G    G  + A  A+   +     P+  TY
Sbjct: 1047 FTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 73/136 (53%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             L+  L  F QL + GLEPD+I YN +I G     R++EAV LF ++    + PN  T+ 
Sbjct: 956  RLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYN 1015

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             LI    K G+  +A  M+ ++L KG K +V TY+ LI GY  S +  +A+  Y +M   
Sbjct: 1016 SLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVG 1075

Query: 127  NISPNIVSYSILIDGL 142
               PN  +Y  L + L
Sbjct: 1076 GCQPNSSTYMQLPNQL 1091



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 97/207 (46%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++F  +  + ++ ++ T+ TI  G      L  A      +    +  N+ T+  LI   
Sbjct: 122 QVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFL 181

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +A  ++  M+E G   +V TYS L+  + K +++ +   +  EM    + PN+
Sbjct: 182 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNV 241

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            SY+I I  L +    +EA +      D+   PDVVT+ ++I+  C AGR ++A  ++  
Sbjct: 242 YSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWK 301

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           M  +   PD +   TL D    S  SQ
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSQ 328



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 93/200 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K+  ++ +++    +  RG+  +      +I   C   +  EA QLF K   + +   
Sbjct: 706 ILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLK 765

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++  LI     E  +D A  +F++M   G   +  TY+ ++D   KS  ++    V +
Sbjct: 766 TGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQK 825

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM         V+Y+ +I GL K   +E+A+  ++  +     P   TY  L+ G  K+G
Sbjct: 826 EMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSG 885

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A  L++ ML  G  P+
Sbjct: 886 KMVDAENLFNEMLEYGCEPN 905



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 9/196 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITF 65
           AL+LF   T    +P  + + T  C Y      +  R+ +  Q+F+ +    +K N  TF
Sbjct: 84  ALELF---TAAARQPTKV-HTTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTF 139

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +      EG +  A +    M E G   N  TY+ LI    KS     A +VY+ M E
Sbjct: 140 ATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVE 199

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           + ISP++ +YS+L+    K+  ++  L+  +      + P+V +Y I IR   +A R  E
Sbjct: 200 DGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDE 259

Query: 186 AMQLYDSMLRNGIMPD 201
           A  +   M  +G  PD
Sbjct: 260 AYHILGKMEDSGCKPD 275



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 7/161 (4%)

Query: 45  EAVQLFEKLTCVQLKPNSITFT----ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           EA++LF   T    +P  +  T     +++     GR+ D   +F  M ++  K NV T+
Sbjct: 83  EALELF---TAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTF 139

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + +  G      ++SA      M E  +S N  +Y+ LI  L K G   EA+  +   ++
Sbjct: 140 ATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVE 199

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + + P V TY++L+  + K       + L + M   G+ P+
Sbjct: 200 DGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN 240



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 83/195 (42%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G   D  ++++++ G      ++++++  E +    +  N      LI   CK  +  +A
Sbjct: 691 GCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEA 750

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F+K    G      +Y+ LI G      +  A D++ EM      P+  +Y++++D 
Sbjct: 751 HQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA 810

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + K   +EE L               VTY  +I G  K+ R  +A+ LY +++  G  P 
Sbjct: 811 MGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPT 870

Query: 202 GLLLSTLADYNLQSS 216
                 L D  L+S 
Sbjct: 871 PCTYGPLLDGLLKSG 885



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L K   ++ A+ LF ++  +G+ P++ TYN++I       +  EA Q++E+L     KP+
Sbjct: 986  LGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPS 1045

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
              T+  LI  +   G  D+A   + +M+  G + N  TY
Sbjct: 1046 VFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 107/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ +  L P ++TYN++I G C +  LD A +L   +    + P+  T+++ ID
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+GR+++A ++F+ + EKG KAN V Y+ LIDGY K+  M  A  + + M   +  P
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +Y+ LIDGLCK   ++EAL      +   L   V TY ILI    K G    A ++ 
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377

Query: 191 DSMLRNGIMPD 201
           D M+ +G  PD
Sbjct: 378 DQMVSSGYQPD 388



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 114/217 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L+   ++  ++ ++GL P + TYN +I GYC    ++ A ++ + +      PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FC++  +  A  + SKMLE     +VVTY+ LI G  K   + SA+ +   M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            EN + P+  +YS+ ID LCK+G +EEA   F+   +  +  + V Y  LI GYCKAG+ 
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A  L D ML    +P+    + L D   +    QE
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQE 337



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 112/200 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ LF ++ +RG EP+I TY  +I   C   +L+E  ++ +++    L P+  T+  LID
Sbjct: 93  AINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALID 152

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CKEG ++ A  +   M       N  TY+ LI G+ + +N+  A  +  +M E+ ++P
Sbjct: 153 GYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTP 212

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ LI G CK G ++ A    +   +N ++PD  TY++ I   CK GR  EA  L+
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           +S+   GI  + ++ + L D
Sbjct: 273 NSLKEKGIKANEVIYTALID 292



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  + +F ++ +    P + TY  I+       R  EA+ LF ++     +PN  T+T
Sbjct: 54  RVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYT 113

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+A CKE ++++   +  +M+EKG   +V TY+ LIDGY K   +++A ++ + M  N
Sbjct: 114 VMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + +PN  +Y+ LI G C++  +  A+      L++ L P VVTY  LI G CK G    A
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSA 233

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L + M  NG++PD    S   D
Sbjct: 234 YRLLNLMNENGVVPDQWTYSVFID 257



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 102/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD+A +L   + + G+ PD  TY+  I   C   R++EA  LF  L    +K N + +T
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +CK G+MDDA  +  +ML +    N  TY+ LIDG  K + ++ A  + E M + 
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +   + +Y+ILI  + K G  + A       + +   PDV  Y   I  +C  G   EA
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +   M   G+MPD L  + + D
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVID 432



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  LF  L ++G++ + + Y  +I GYC   ++D+A  L +++      PN
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T+  LID  CKE ++ +A ++   M++KG K  V TY+ LI    K  +   A  + +
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +   P++  Y+  I   C RG ++EA        +  ++PD +TY ++I  Y   G
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLG 438

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
               A  +   M   G  P     S L  + L+   ++++
Sbjct: 439 LLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKY 478



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 9/178 (5%)

Query: 33  IICGYCSL---------NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           ++ GYC L         N ++ A  +F  +     + N +++T LI   C+ GR+D+   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F KM E      V TY+ ++   F+S     A +++ EM E    PNI +Y+++I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           K   +EE        ++  L+P V TY  LI GYCK G    A ++ D M  N   P+
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178



 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 4/171 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + AL+LF ++ + G  P+I TY  +I G C + RL  A +LF+ +    + P+   +  
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C+ G   DA  +   M+E G    + + + L  G ++  + + A  V+  + +  
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623

Query: 128 ISPNIVSYSILIDGLCKRGLME--EALYAFHCALDNHLLPDVVTYAILIRG 176
            + + V++ ILIDGL K GL +    L     A    + P   TY +LI G
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQ--TYRMLIEG 672



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 38/242 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A  +   + +RG+ PD +TY  +I  Y  L  L+ A  + +++      P+  T++
Sbjct: 404 NIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYS 463

Query: 67  ILIDAFCKEG-----------------------------RMDDATMMFSKMLEKGPKANV 97
            LI    KE                              + + A  +F KMLE G   N+
Sbjct: 464 CLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNI 523

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TY+ LI G  K   +  A  +++ M E  +SP+   Y+ L++  C+ G+  +A+     
Sbjct: 524 NTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGA 583

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG---------IMPDGLLLSTL 208
            +++  LP + +  +L  G  + G   +A  ++ ++L+ G         I+ DGLL + L
Sbjct: 584 MMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGL 643

Query: 209 AD 210
           +D
Sbjct: 644 SD 645



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 68  LIDAFCKEGRMDDATM---------MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +++ +CK G + +A +         +F+ M +KG + N V+Y+ LI G  +   +    +
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           ++++M E++  P + +Y++++  L + G   EA+  F    +    P++ TY ++I   C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K  +  E  ++ D M+  G++P     + L D
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALID 152



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 64/141 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KLF  + +RG+ P    YN+++   C L    +AV+L   +      P 
Sbjct: 533 LCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPL 592

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +  +L     +EG  + A ++FS +L+ G   + V +  LIDG  K+       ++  
Sbjct: 593 LESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLG 652

Query: 122 EMCENNISPNIVSYSILIDGL 142
            M       +  +Y +LI+GL
Sbjct: 653 VMEARGCQIHPQTYRMLIEGL 673


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++  +G EP ++TY ++I G   ++RLDEA  LFE+     ++ N +
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   NV T++CL+D   K++ +  A   ++ M
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +   +PN ++YSILI GLCK     +A   +         P+V TY  +I G  KAG  
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L++     G + D  + + + +
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIE 837



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A +LF  + ++G   D   YNT+I G+C   ++++A QL E++     +P 
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +   KG + NVV YS LIDG+ K   +  A+ + E
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    D    P+ +TY+ILI G CK  
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G  P+    +T+
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTM 800



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  L  +   +G  P +++YN I+       ++DEA++ FE++    + PN  T+ I
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNI 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK G+++ A ++   M + G   NV+T + ++D   K+Q +  A  ++E +    
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V+Y  LI+GL + G ++EA   +   LD + +P+ V Y  LIR + K GR  +  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++Y+ MLR G  PD LLL+T  D
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMD 557



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 109/210 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K   L+ AL +   + D GL P++IT N ++   C   RLD+A  +FE L     +P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++T+  LI+   + GR+D+A  ++ +ML+     N V Y+ LI  +FK    +    +Y
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM     SP+++  +  +D + K G +E+    F    +   +PD  +Y ILI G  KA
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA +L+ +M   G + D    +T+ D
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVID 627



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 1/210 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +E  +DAAL L  ++    LEPD++ YN  I  +    ++D A + F ++    L  
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVL 303

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I   CK  R+++A  +F  M +         Y+ +I GY  +   + A+ + 
Sbjct: 304 DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLL 363

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E        P++VSY+ ++  L ++G ++EAL  F   +    +P++ TY I+I   CKA
Sbjct: 364 ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE-EMKKDAIPNLSTYNIMIDMLCKA 422

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+   A+ + D+M   G+ P+ + ++ + D
Sbjct: 423 GKLETALVVRDAMKDAGLFPNVITVNIMVD 452



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 102/198 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++   G  PD++  NT +        +++   LF+++  +   P++ ++TILI   
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +A  +F  M E+G   +   Y+ +IDG+ KS  +  A+ + EEM      P +
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 715 LMQKGLTPNVYTWNCLLD 732



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  +++  G  P   T   I+  +    +L EA    + +  ++ +P    +T LI A 
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGAL 210

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
                 D    +F +M E G   NV  ++ LI  + +   + +A  + +EM  N++ P++
Sbjct: 211 STSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDV 270

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V Y++ ID   K G ++ A   FH    N L+ D VTY  +I   CKA R  EA++L++ 
Sbjct: 271 VLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEH 330

Query: 193 MLRNGIMP 200
           M +N  +P
Sbjct: 331 MDQNKQVP 338



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IK   L  A      +      P    Y  +I    +    D  + LF+++  +    N
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT LI  F +EGR+D A  +  +M     + +VV Y+  ID + K+  +  A+  + 
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFH 294

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N +  + V+Y+ +I  LCK   + EA+  F     N  +P    Y  +I GY  AG
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A  L +   R G +P
Sbjct: 355 KFEDAYSLLERQRRKGCIP 373



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +LTDR    +   YN+++       + +   Q+ E+++     P++ T   ++ +F K  
Sbjct: 122 RLTDRAHCRE--AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSR 179

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++ +A      M +   +     Y+ LI     S++      ++++M E   + N+  ++
Sbjct: 180 KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFT 239

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI    + G ++ AL        N L PDVV Y + I  + KAG+   A + +  M  N
Sbjct: 240 TLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKAN 299

Query: 197 GIMPDGLLLSTL 208
           G++ D +  +++
Sbjct: 300 GLVLDDVTYTSM 311



 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 2/119 (1%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           GP  N      L   + KS+ ++ AF   + M +    P   +Y+ LI  L      +  
Sbjct: 162 GPSNNTCIEIVL--SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCM 219

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L  F    +     +V  +  LIR + + GR   A+ L D M  N + PD +L +   D
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCID 278


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 114/207 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++  +G EP ++TY ++I G   ++RLDEA  LFE+     ++ N +
Sbjct: 631 KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   NV T++CL+D   K++ +  A   ++ M
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +   +PN ++YSILI GLCK     +A   +         P+V TY  +I G  KAG  
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNI 810

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L++     G + D  + + + +
Sbjct: 811 VEADTLFEKFKEKGGVADSAIYNAIIE 837



 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A +LF  + ++G   D   YNT+I G+C   ++++A QL E++     +P 
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +ID   K  R+D+A M+F +   KG + NVV YS LIDG+ K   +  A+ + E
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ +  ++PN+ +++ L+D L K   + EAL  F    D    P+ +TY+ILI G CK  
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A   +  M + G  P+    +T+
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTM 800



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A  L  +   +G  P +++YN I+       ++DEA++ FE++    + PN  T+ I
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNI 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK G+++ A ++   M + G   NV+T + ++D   K+Q +  A  ++E +    
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V+Y  LI+GL + G ++EA   +   LD + +P+ V Y  LIR + K GR  +  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           ++Y+ MLR G  PD LLL+T  D
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMD 557



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 109/210 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K   L+ AL +   + D GL P++IT N ++   C   RLD+A  +FE L     +P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +++T+  LI+   + GR+D+A  ++ +ML+     N V Y+ LI  +FK    +    +Y
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM     SP+++  +  +D + K G +E+    F    +   +PD  +Y ILI G  KA
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G   EA +L+ +M   G + D    +T+ D
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVID 627



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 1/210 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +E  +DAAL L  ++    LEPD++ YN  I  +    ++D A + F ++    L  
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVL 303

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T +I   CK  R+++A  +F  M +         Y+ +I GY  +   + A+ + 
Sbjct: 304 DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLL 363

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E        P++VSY+ ++  L ++G ++EAL  F   +    +P++ TY I+I   CKA
Sbjct: 364 ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE-EMKKDAIPNLSTYNIMIDMLCKA 422

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G+   A+ + D+M   G+ P+ + ++ + D
Sbjct: 423 GKLETALVVRDAMKDAGLFPNVITVNIMVD 452



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 102/198 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++   G  PD++  NT +        +++   LF+++  +   P++ ++TILI   
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   +A  +F  M E+G   +   Y+ +IDG+ KS  +  A+ + EEM      P +
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 715 LMQKGLTPNVYTWNCLLD 732



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  +++  G  P   T   I+  +    +L EA    + +  ++ +P    +T LI A 
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGAL 210

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
                 D    +F +M E G   NV  ++ LI  + +   + +A  + +EM  N++ P++
Sbjct: 211 STSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDV 270

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V Y++ ID   K G ++ A   FH    N L+ D VTY  +I   CKA R  EA++L++ 
Sbjct: 271 VLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEH 330

Query: 193 MLRNGIMP 200
           M +N  +P
Sbjct: 331 MDQNKQVP 338



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IK   L  A      +      P    Y  +I    +    D  + LF+++  +    N
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT LI  F +EGR+D A  +  +M     + +VV Y+  ID + K+  +  A+  + 
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFH 294

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N +  + V+Y+ +I  LCK   + EA+  F     N  +P    Y  +I GY  AG
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A  L +   R G +P
Sbjct: 355 KFEDAYSLLERQRRKGCIP 373



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +LTDR    +   YN+++       + +   Q+ E+++     P++ T   ++ +F K  
Sbjct: 122 RLTDRAHCRE--AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSR 179

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++ +A      M +   +     Y+ LI     S++      ++++M E   + N+  ++
Sbjct: 180 KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFT 239

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI    + G ++ AL        N L PDVV Y + I  + KAG+   A + +  M  N
Sbjct: 240 TLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKAN 299

Query: 197 GIMPDGLLLSTL 208
           G++ D +  +++
Sbjct: 300 GLVLDDVTYTSM 311



 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 2/119 (1%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           GP  N      L   + KS+ ++ AF   + M +    P   +Y+ LI  L      +  
Sbjct: 162 GPSNNTCIEIVL--SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCM 219

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L  F    +     +V  +  LIR + + GR   A+ L D M  N + PD +L +   D
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCID 278


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++  ++ ++ ++P + TY  I+ G   ++RLDEA  LFE+     ++ N +
Sbjct: 476 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  +M++KG   NV T++ L+D   K++ +  A   ++ M
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    PN  +YSILI+GLC+     +A   +       L+P+VVTY  +I G  K G  
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 655

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T+A  L++    NG +PD    + L
Sbjct: 656 TDAYSLFERFKANGGIPDAASFNAL 680



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 107/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G   D   YN ++ G+C   ++ +A ++ E++    ++P   T+  ++D   
Sbjct: 451 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 510

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K  R+D+A M+F +   KG + NVV YS LIDG+ K   +  A+ + EEM +  ++PN+ 
Sbjct: 511 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 570

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +++ L+D L K   + EAL  F    +    P+  TY+ILI G C+  +  +A   +  M
Sbjct: 571 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 630

Query: 194 LRNGIMPDGLLLSTL 208
            + G++P+ +  +T+
Sbjct: 631 QKQGLVPNVVTYTTM 645



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + A KL  +L +RG  P ++++N+I+       ++DEA+ LFE +     +PNS T+ 
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYN 258

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID  C  GR+++A  +  +M       N++T + ++D   K++ ++ A+ ++E   + 
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P+ V+Y  LIDGL K+G ++EA   F   LD     + V Y  LIR +   GR  + 
Sbjct: 319 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 378

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  ++R G  PD  LL+T  D
Sbjct: 379 HKVFKELIRRGCKPDLTLLNTYMD 402



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 99/187 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF +   +G+E +++ Y+++I G+  + R+DEA  + E++    L PN
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+DA  K   +++A + F  M E     N  TYS LI+G  + Q    AF  ++
Sbjct: 569 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 628

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ +I GL K G + +A   F     N  +PD  ++  LI G   A 
Sbjct: 629 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 688

Query: 182 RPTEAMQ 188
           R  EA Q
Sbjct: 689 RAMEAYQ 695



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A ++  ++    L P+++T N ++   C   +L+EA ++FE  +     P+ +T+ 
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 328

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K+G++D+A  +F KML+ G  AN V Y+ LI  +F     +    V++E+   
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++   +  +D + K G +E+    F        LPDV +Y+ILI G  KAG+  E 
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++ +M + G   D    + + D
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVD 472



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A K+F   + RG  PD +TY ++I G     ++DEA +LFEK+       N
Sbjct: 299 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 358

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI  F   GR +D   +F +++ +G K ++   +  +D  FK+  ++    ++E
Sbjct: 359 PVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++      P++ SYSILI GL K G   E    FH         D   Y  ++ G+CK+G
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 478

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A ++ + M    + P
Sbjct: 479 KVHKAYEILEEMKEKCVQP 497



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 104/198 (52%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F +L  RG +PD+   NT +        +++   +FE +      P+  +++ILI   
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G+  + + +F  M ++G   +   Y+ ++DG+ KS  +  A+++ EEM E  + P +
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  ++DGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M++ G+ P+    ++L D
Sbjct: 560 MMKKGLTPNVYTWNSLLD 577



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 12/232 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  AL L  ++    LEPDI+ YN  I  +     +D A + F +L    LKP+
Sbjct: 90  LAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPD 149

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T +I   CK GR+ +A  +F++M  +        Y+ +I GY  +   + A+ + E
Sbjct: 150 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 209

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + E    P++VS++ ++  L K+  ++EAL  F   +     P+  TY I+I   C  G
Sbjct: 210 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLGG 268

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD-----------YNLQSSGSQEHC 222
           R  EA ++ D M    + P+ L ++ + D           Y +  S SQ  C
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 90/199 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   LD A+     +      P    Y  +I       R + A++L  ++  V  +  
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT L+ A  +EG++ DA  +  ++     + ++V Y+  ID + K+ N+  A   + 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P+ VSY+ +I  LCK G + EA   F        +P    Y  +I GY  AG
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  +A +L + +   G +P
Sbjct: 200 RFEDAYKLLERLRERGCIP 218



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 63/141 (44%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L  A  +  R+DDA +  + M     +     Y+ LI    +++  + A ++  +M E  
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               +  ++ L+  L + G + +AL        + L PD+V Y + I  + KAG    A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + +  +   G+ PD +  +++
Sbjct: 136 KFFHELKAQGLKPDDVSYTSM 156


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 109/199 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A   F   T   L  D++ YN +I GY  L+ + EA+QL+ K+    + P+
Sbjct: 491 LFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ FC+ G + +A  M   +  KG   +VVTY+ L++ Y +  NM+  F    
Sbjct: 551 VVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N + P  V+Y++LI GLC++  M E+L          LLPD VTY  +I+ +CK  
Sbjct: 611 EMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGK 670

Query: 182 RPTEAMQLYDSMLRNGIMP 200
             T+A+QLY+ ML +   P
Sbjct: 671 EITKALQLYNMMLLHNCDP 689



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 110/203 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A K+  ++  +GL PD++TY T+ICG+C +  ++EA++L ++      K N I + +
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   CK GR+++A  +F +M     + + + YS LI G  K   ++ A+ +YE+M    
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+  +   ++ GL K G + EA   F       L+ DVV Y I+I GY +     EAM
Sbjct: 477 KFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAM 536

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           QLY  M+  GI P  +  +TL +
Sbjct: 537 QLYYKMIERGITPSVVTFNTLIN 559



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 35/237 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ ALKL  +   RG + ++I YN ++   C + R++EA+ LF+++  ++L+P+ I ++
Sbjct: 391 NIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYS 450

Query: 67  ILIDAFCKEGRMDDATMMFSKML--EKGPK------------------------------ 94
           ILI   CKEG +  A  ++ +M    K P                               
Sbjct: 451 ILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 95  ---ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
               +VV Y+ +IDGY +   +  A  +Y +M E  I+P++V+++ LI+G C+RG + EA
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                      L+P VVTY  L+  YC+ G   E       M  N ++P  +  + L
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVL 627



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L K   ++ AL LF ++    LEPD I Y+ +I G C    +  A QL+E++        
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 54  ---------------------------TCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
                                      T + L  + + + I+ID + +   + +A  ++ 
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYY 540

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           KM+E+G   +VVT++ LI+G+ +  ++  A  + E +    + P++V+Y+ L++  C+ G
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M+E  +  H    N ++P  VTY +LI+G C+  +  E++QL + M   G++PD +  +
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 207 TL 208
           T+
Sbjct: 661 TI 662



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 95/186 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A   F  +   GL  D  +YN ++ G C    +DEA+   + +    ++P+ +T+  
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L   F   G M  A  +  KML +G   ++VTY+ LI G+ +  N++ A  + +E     
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N++ Y++L+  LCK G +EEAL  F       L PD + Y+ILI G CK G    A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 188 QLYDSM 193
           QLY+ M
Sbjct: 467 QLYEQM 472



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 96/189 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+   +  +GL P ++TY T++  YC +  + E      ++    + P  +T+T+LI 
Sbjct: 570 ARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIK 629

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++ +M ++  +   M  KG   + VTY+ +I  + K + +  A  +Y  M  +N  P
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
             V+Y +LI+ LC  G +++         D ++    VTY  +I+ +C  G+ ++A+  +
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYF 749

Query: 191 DSMLRNGIM 199
           + ML  G +
Sbjct: 750 NQMLAKGFV 758



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 99/190 (52%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           +++ + P I++ NTI+  +C +  +D A   F  +    L  +S ++ IL+   C  G M
Sbjct: 263 SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSM 322

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           D+A      M + G + +VVTY+ L  G+     M  A  V ++M    ++P++V+Y+ L
Sbjct: 323 DEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTL 382

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I G C+ G +EEAL      L      +V+ Y +L+   CK GR  EA+ L+D M    +
Sbjct: 383 ICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRL 442

Query: 199 MPDGLLLSTL 208
            PD ++ S L
Sbjct: 443 EPDFIVYSIL 452



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 91/171 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++L+ ++ +RG+ P ++T+NT+I G+C    L EA ++ E +    L P+ +T+T L++
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+C+ G M +      +M         VTY+ LI G  +   M  +  + E M    + P
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLP 654

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           + V+Y+ +I   CK   + +AL  ++  L ++  P  VTY +LI   C  G
Sbjct: 655 DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFG 705



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 94/198 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  +L+L   +  +GL PD +TYNTII  +C    + +A+QL+  +      P 
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPT 690

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LI+A C  G + D   M   + ++      VTY  +I  +     +  A   + 
Sbjct: 691 QVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFN 750

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M       +I  YS +I+ LCKRGL+ EA Y F   L   + PD      ++  + + G
Sbjct: 751 QMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810

Query: 182 RPTEAMQLYDSMLRNGIM 199
             +   +    ++++G +
Sbjct: 811 NNSSVFEFLAMVVKSGFI 828



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P  +TY  +I G C  N++ E++QL E +    L P+S+T+  +I  FCK   +  A  +
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           ++ ML        VTY  LI+      ++K    +   + + NI+   V+Y  +I   C 
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCA 738

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +G + +AL  F+  L    +  +  Y+ +I   CK G  TEA   +  ML  G+ PD
Sbjct: 739 KGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 1/191 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H D    ++ ++   G      T + +I G C  ++L++A+        V + P+ ++  
Sbjct: 217 HTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSIN 275

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++  FCK G +D A   F  M++ G   +  +Y+ L+ G   + +M  A    ++M ++
Sbjct: 276 TIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+ L  G    GLM  A       L   L PD+VTY  LI G+C+ G   EA
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 187 MQLYDSMLRNG 197
           ++L    L  G
Sbjct: 396 LKLRQETLSRG 406



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 43/186 (23%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA---F 117
           N + + +L  A+ +   + DA  + +KM +   +A+V TY+ L+       NM+     +
Sbjct: 169 NGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLL------HNMRHTDIMW 222

Query: 118 DVYEE-------------------MCENN---------------ISPNIVSYSILIDGLC 143
           DVY E                   +CE +               + P+IVS + ++   C
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFC 282

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K GL++ A   F   + N LL D  +Y IL+ G C AG   EA+   D M ++G+ PD +
Sbjct: 283 KVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVV 342

Query: 204 LLSTLA 209
             +TLA
Sbjct: 343 TYNTLA 348


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 32/229 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--------- 54
           KE  LD A   + ++T+ GL  +II  +T++ G   L R+DEA  L +K+          
Sbjct: 590 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 649

Query: 55  ----------CVQ-------------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                      +Q             L PN+I + I I   CK G++DDA   FS +  K
Sbjct: 650 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 709

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +  TY  LI GY  + N+  AF + +EM    + PNIV+Y+ LI+GLCK   ++ A
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 769

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
              FH      L P+VVTY  LI GYCK G    A +L D M+  GI P
Sbjct: 770 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFT 66
           ++AA  +   ++++G+  +++TY  +I GYC   ++DEA ++   +     L P+   + 
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID +C+ G++DDA  +  +ML  G K N+   + LI+GY K   +  A  V   M + 
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P+  SY+ L+DG C+ G   EA       L   + P V+TY  L++G C+ G   +A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +Q++  M++ G+ PD +  STL D
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLD 446



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 105/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  +  ++ D  L+PD  +YNT++ GYC      EA  L +K+    ++P  +
Sbjct: 345 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 404

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C+ G  DDA  ++  M+++G   + V YS L+DG FK +N + A  +++++
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                + + ++++ +I GLCK G M EA   F    D    PD +TY  LI GYCKA   
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A ++  +M R  I P
Sbjct: 525 GQAFKVKGAMEREPISP 541



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 36/243 (14%)

Query: 4   KECHLDAALK-LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K+C +D A K L G   +  L PD   Y  +I GYC   ++D+AV+L +++  + LK N 
Sbjct: 274 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 333

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
                LI+ +CK G + +A  + ++M++   K +  +Y+ L+DGY +  +   AF++ ++
Sbjct: 334 FICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 393

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA----------- 171
           M +  I P +++Y+ L+ GLC+ G  ++AL  +H  +   + PD V Y+           
Sbjct: 394 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 453

Query: 172 ----------ILIRGY--------------CKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                     IL RG+              CK G+  EA +++D M   G  PDG+   T
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 513

Query: 208 LAD 210
           L D
Sbjct: 514 LID 516



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + + A  L+  +  RG     IT+NT+I G C + ++ EA ++F+K+  +   P+
Sbjct: 448 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID +CK   +  A  +   M  +    ++  Y+ LI G FKS+ +    D+  
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PNIV+Y  LIDG CK G++++A  ++    +N L  +++  + ++ G  + G
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 627

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L   M+ +G  PD
Sbjct: 628 RIDEANLLMQKMVDHGFFPD 647



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 103/202 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D AL+++  +  RG+ PD + Y+T++ G   +   + A  L++ +       + ITF  
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK G+M +A  +F KM + G   + +TY  LIDGY K+ N+  AF V   M    
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISP+I  Y+ LI GL K   + E            L P++VTY  LI G+CK G   +A 
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
             Y  M  NG+  + ++ ST+ 
Sbjct: 599 SSYFEMTENGLSANIIICSTMV 620



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F  +   G  P + + N+++           A  +++++  V + P+    +I+++
Sbjct: 141 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 200

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFCK+G++D+A     KM   G + N+VTY  LI+GY    ++++A  V + M E  +S 
Sbjct: 201 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 260

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+V+Y++LI G CK+  M+EA        +   L+PD   Y +LI GYC+ G+  +A++L
Sbjct: 261 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            D MLR G+  +  + ++L +
Sbjct: 321 LDEMLRLGLKTNLFICNSLIN 341



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 32/230 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++  A K+ G +    + P I  YN++I G     RL E   L  ++    L PN +
Sbjct: 520 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 579

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA------- 116
           T+  LID +CKEG +D A   + +M E G  AN++  S ++ G ++   +  A       
Sbjct: 580 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 639

Query: 117 -------------------------FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                                     D  +E C+  + PN + Y+I I GLCK G +++A
Sbjct: 640 VDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 699

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              F        +PD  TY  LI GY  AG   EA +L D MLR G++P+
Sbjct: 700 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 749



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 36/243 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  ++ Q+   G+ PD+   + ++  +C   ++DEA    +K+  + ++PN
Sbjct: 167 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 226

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ +   G ++ A  +   M EKG   NVVTY+ LI GY K   M  A  V  
Sbjct: 227 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR 286

Query: 122 EMCEN-NISPNIVSYSILID-----------------------------------GLCKR 145
            M E   + P+  +Y +LID                                   G CKR
Sbjct: 287 GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 346

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + EA       +D +L PD  +Y  L+ GYC+ G  +EA  L D ML+ GI P  L  
Sbjct: 347 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406

Query: 206 STL 208
           +TL
Sbjct: 407 NTL 409



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 78/131 (59%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A + F  L+ +G  PD  TY T+I GY +   +DEA +L +++    L PN
Sbjct: 690 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 749

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK   +D A  +F K+ +KG   NVVTY+ LIDGY K  NM +AF + +
Sbjct: 750 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 809

Query: 122 EMCENNISPNI 132
           +M E  ISP+I
Sbjct: 810 KMIEEGISPSI 820


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 107/201 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +    + F Q+ + G  P +I  N ++ G    N +     ++ ++  V + PNS
Sbjct: 193 VKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNS 252

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF IL   FCK+G +D       KM E+G + ++VTY+ LI+GY     +  AF +Y  
Sbjct: 253 YTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRI 312

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P++VSY+ L++GLCK G + EA    H  +   L PDVV+Y  LI GYCK G+
Sbjct: 313 MYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGK 372

Query: 183 PTEAMQLYDSMLRNGIMPDGL 203
             E+  L   M+ NGI PD  
Sbjct: 373 MLESKSLLYEMIGNGIFPDSF 393



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 12/203 (5%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D       ++ + G EPDI+TYNT+I GYC   RL +A  L+  +    + P+ +
Sbjct: 264 KDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLV 323

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T L++  CKEGR+ +A  +  +M+ +G   +VV+Y+ LI GY K   M  +  +  EM
Sbjct: 324 SYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEM 383

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILIRGY 177
             N I P+  +  +LI G  K G +  A      L  F  ++     PD+  Y  L+   
Sbjct: 384 IGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSIS----PDIYDY--LVASL 437

Query: 178 CKAGRPTEAMQLYDSMLRNGIMP 200
           C+  RP  A  L + M + G +P
Sbjct: 438 CEEDRPFAAKTLLERMSQRGYIP 460



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H+     ++G++   G+ P+  T+N +   +C    +D+     EK+     +P+
Sbjct: 227 LLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPD 286

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ +C  GR+ DA  ++  M  +    ++V+Y+ L++G  K   ++ A  +  
Sbjct: 287 IVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLH 346

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++P++VSY+ LI G CK G M E+    +  + N + PD  T  +LI+GY K G
Sbjct: 347 RMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEG 406

Query: 182 RPTEAMQLYDSMLRNG--IMPD 201
               A+ L   + + G  I PD
Sbjct: 407 WLISALNLVVELEKFGVSISPD 428



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A +L  ++  RGL PD+++YNT+ICGYC   ++ E+  L  ++    + P+
Sbjct: 332 LCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPD 391

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T  +LI  + KEG +  A  +  ++ + G   +   Y  L+    +     +A  + E
Sbjct: 392 SFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLE 451

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P++  Y+ LI+ LCK   + +AL      +  ++ P+++TY  LIR  C+ G
Sbjct: 452 RMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMG 511

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L + ML  G+ PD
Sbjct: 512 RSIEAEKLMEEMLHFGLQPD 531



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++    + P+++TY  +I   C + R  EA +L E++    L+P+      +I 
Sbjct: 481 ALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIH 540

Query: 71  AFCKE---GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            +C+E   G+ +   ++F+K  +        +YS L+    +  ++    ++ E M +  
Sbjct: 541 GYCREKDAGKAESLLVLFAKEFQIFDSE---SYSTLVRIVCEDGDVAKFMELQERMLKVG 597

Query: 128 ISPNIVSYSILIDGLCKR-GLMEEAL 152
            +PN ++   +IDGL K  GL++E L
Sbjct: 598 FAPNSLTCKYMIDGLRKNVGLVKEKL 623


>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
 gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
          Length = 534

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 4/196 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+LF  +     +PD+ +YNTII G C   RL  A+++F ++    + P  +T+T LI 
Sbjct: 184 ALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIH 239

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              +EG  DDA  +F +M  +G   N+VTYS LIDG  K     SA ++ + M +    P
Sbjct: 240 WLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLP 299

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++YS +IDGLCK  ++ EA+            PD   +  LI G C AGR  EA    
Sbjct: 300 NTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYL 359

Query: 191 DSMLRNGIMPDGLLLS 206
           D M+  GI P+ +  S
Sbjct: 360 DEMILAGIEPNRVTWS 375



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLD--EAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++   CS    D  +A++LF  +     K
Sbjct: 138 LVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAQCSDAAADIKDALRLFRNIP----K 193

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+  ++  +ID  C+ GR+  A  MFS+M+ K     VVTY+ LI    +      A  +
Sbjct: 194 PDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKI 253

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    +SPN+V+YS LIDGLCK G    AL      +    LP+ +TY+ +I G CK
Sbjct: 254 FDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCK 313

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +EAM++ D M   G  PD  L   L
Sbjct: 314 EHMLSEAMEVLDRMRLQGRKPDAGLFGKL 342



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 7/204 (3%)

Query: 10  AALKLF-GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AAL LF    +D  L     +YN ++    + + L  A  L   +      P + T+ +L
Sbjct: 110 AALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVL 169

Query: 69  IDAFCKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + A C +   D  DA  +F  +    PK +V +Y+ +IDG  +   + +A +++ EM   
Sbjct: 170 LKAQCSDAAADIKDALRLFRNI----PKPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGK 225

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I+P +V+Y+ LI  L + G  ++AL  F       + P++VTY+ LI G CK GR   A
Sbjct: 226 CIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASA 285

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L D M++   +P+ +  S++ D
Sbjct: 286 LELMDRMIKEKKLPNTITYSSVID 309



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 7/207 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L AAL++F ++  + + P ++TY T+I         D+A+++F+++    + PN
Sbjct: 206 LCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPN 265

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK GR   A  +  +M+++    N +TYS +IDG  K   +  A +V +
Sbjct: 266 LVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLD 325

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR------ 175
            M      P+   +  LI GLC  G   EA       +   + P+ VT+++  R      
Sbjct: 326 RMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMILAGIEPNRVTWSLHTRINNTVL 385

Query: 176 -GYCKAGRPTEAMQLYDSMLRNGIMPD 201
              C  G    A Q+Y S     I  D
Sbjct: 386 TALCAKGELGRAFQVYQSTRTRSISTD 412



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 42/219 (19%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L +E   D ALK+F ++  RG+ P+++TY+++I G C   R   A++L +++   +  P
Sbjct: 240 WLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLP 299

Query: 61  NSITFTILIDAFCKE-----------------------------------GRMDDATMMF 85
           N+IT++ +ID  CKE                                   GR  +A    
Sbjct: 300 NTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYL 359

Query: 86  SKMLEKGPKANVVTYS-------CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
            +M+  G + N VT+S        ++        +  AF VY+     +IS +  ++ +L
Sbjct: 360 DEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTTFHLL 419

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           ++   K+  ME+A +     L    +P+  T+ ++I GY
Sbjct: 420 VESFSKKKNMEKAAHVVLDMLSERCIPERETWDVIISGY 458



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 13/216 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICG----YCSLNRLDEAVQLFEKLTCVQ 57
           L    HL  A  L  +   RG+ P +        G    +   +R   A+ LF       
Sbjct: 65  LASAGHLPLATSLLSR--SRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDL 122

Query: 58  LKPNSI-TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
             P+S  ++  ++ A      +  A  + + M   G      TY+ L+    K+Q   +A
Sbjct: 123 ALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLL----KAQCSDAA 178

Query: 117 FDVYE--EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            D+ +   +  N   P++ SY+ +IDGLC+RG +  AL  F   +   + P VVTY  LI
Sbjct: 179 ADIKDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLI 238

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               + G   +A++++D M R G+ P+ +  S+L D
Sbjct: 239 HWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLID 274


>gi|414591640|tpg|DAA42211.1| TPA: hypothetical protein ZEAMMB73_215753 [Zea mays]
          Length = 299

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 116/199 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I ++I
Sbjct: 35  MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 94

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A + F +M E G   ++ TY+ ++ G FK++    A  +++E+   N
Sbjct: 95  IIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 154

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI++ + +IDG+ +   +EEA   F     + L+P VVTY+I+I    K G   EA 
Sbjct: 155 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 214

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  P+  LL+
Sbjct: 215 DMFSSMQNAGCEPNSRLLN 233



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 115/198 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F    + GL PD + Y+ ++ GYC + ++++A+++F+ +    ++PN + +  L++
Sbjct: 3   AQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 62

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK GR+D+   +F +ML++G K + + YS +IDG F++     A   + EM E+ I+ 
Sbjct: 63  GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAM 122

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I +Y+I++ GL K    +EA++ F      ++  +++T   +I G  +  R  EA  L+
Sbjct: 123 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 182

Query: 191 DSMLRNGIMPDGLLLSTL 208
            S+ R+ ++P  +  S +
Sbjct: 183 ASISRSRLVPSVVTYSIM 200



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 94/176 (53%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           +A  +F+    V L P+++ +++L+D +C  G+M+ A  +F  M+  G + NVV Y  L+
Sbjct: 2   DAQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 61

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           +GY K   +     ++ EM +  I P+ + YSI+IDGL + G    A   FH   ++ + 
Sbjct: 62  NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 121

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            D+ TY I++RG  K     EA+ L+  +    +  + + L+T+ D   Q+   +E
Sbjct: 122 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 177



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 75/151 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ +IIT NT+I G     R++EA  LF  ++  +L P+
Sbjct: 134 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 193

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I    KEG +++A  MFS M   G + N    + ++    K   +  A     
Sbjct: 194 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 253

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           ++ E N S   ++  +L+D    +G   E +
Sbjct: 254 KIDERNFSLEHLTTMLLVDLFSSKGTCREHI 284


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+ D  ++PD +TY  +I GY  L R  EA ++F+++T   L P+
Sbjct: 317 LCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPD 376

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  L+D+ CK  R  +A  +F  +  KG K ++++YS L+ GY          +++ 
Sbjct: 377 IVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFH 436

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N I  +   ++ILI+   KRG+M+EAL  F       + P+VVTYA +I   C+ G
Sbjct: 437 SMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMG 496

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+    M+  G+ P+ ++  +L
Sbjct: 497 RLADAMEKLSQMISIGLKPNTVVYHSL 523



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 113/208 (54%), Gaps = 1/208 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL +F ++  +G+ P+++TY T+I   C + RL +A++   ++  + LKPN++
Sbjct: 459 KRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV 518

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +  LI  FC  G +  A  + S+M+++G P+ N+  +S +I        + +A DV+  
Sbjct: 519 VYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL 578

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +      P+I +++ LIDG C  G M++A       +     PDVVTY+ LI GY K+GR
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             + + L+  ML   + P  +  S + D
Sbjct: 639 IDDGLILFREMLCKRVKPTTVTYSLVLD 666



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 118/219 (53%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  +  A  +F  +   G  PDI T+N++I GYC + ++D+A  + + +     +P+
Sbjct: 563 LCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPD 622

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+ + K GR+DD  ++F +ML K  K   VTYS ++DG F++    +A  ++ 
Sbjct: 623 VVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFH 682

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +Y+I++ GLC+    +EA+  FH     +L  ++     +I    K  
Sbjct: 683 EMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVK 742

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R  EA  L+ S+  +G++P+      +   NL   GS E
Sbjct: 743 RREEAHDLFASVSASGLVPNASTYGVMI-INLLKEGSVE 780



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 102/188 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F ++T  GL PDI+T+N+++   C   R  EA ++F  +     KP+ I+++IL+ 
Sbjct: 361 AAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLH 420

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  EGR  D   +F  M + G  A+   ++ LI+ + K   M  A  ++ EM    +SP
Sbjct: 421 GYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSP 480

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ +I  LC+ G + +A+      +   L P+ V Y  LI+G+C  G   +A +L 
Sbjct: 481 NVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELV 540

Query: 191 DSMLRNGI 198
             M+  GI
Sbjct: 541 SEMMDQGI 548



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PD+++Y  +I G      + +A  LF ++    + PN +T+  ++ A CK   MD A
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++  +M +   + + VTY+ +I GY      K A  +++EM    + P+IV+++ L+D 
Sbjct: 327 ELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK    +EA   FH        PD+++Y+IL+ GY   GR  +   L+ SM  NGI+ D
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVAD 446



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 2/214 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTI 67
           D     F +L   GL  D I  NT +   C   R DEA+  L  +++ +   P++ ++  
Sbjct: 182 DLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNT 241

Query: 68  LIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +I + C   R  +A  M  +M +  G   +VV+Y+ +I G F    +  A +++ EM + 
Sbjct: 242 VIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQK 301

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V+Y+ ++  LCK   M++A        DN + PD VTY  +I GY   GR  EA
Sbjct: 302 GVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEA 361

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +++  M R G++PD +  ++L D   +   S+E
Sbjct: 362 AKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKE 395



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 107/207 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +   +   G EPD++TY+T+I GY    R+D+ + LF ++ C ++KP ++T+++
Sbjct: 604 MDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D   + GR   A  MF +M+E G   ++ TY+ ++ G  ++     A  ++ ++   N
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +   I   + +I  L K    EEA   F     + L+P+  TY ++I    K G   EA 
Sbjct: 724 LKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEAD 783

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            ++ SM + G  P   LL+ +    LQ
Sbjct: 784 IMFSSMEKTGCAPSSRLLNDIIRMLLQ 810



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 1/184 (0%)

Query: 11  ALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A +L  ++ D+G+  P+I  +++II   C+  R+  A  +F  +  +  +P+  TF  LI
Sbjct: 536 AKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLI 595

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D +C  G+MD A  +   M+  G + +VVTYS LI+GYFKS  +     ++ EM    + 
Sbjct: 596 DGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK 655

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P  V+YS+++DGL + G    A   FH  +++     + TY I+++G C+     EA+ L
Sbjct: 656 PTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITL 715

Query: 190 YDSM 193
           +  +
Sbjct: 716 FHKL 719



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 36/241 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---------------------------- 42
           A ++F  +  +G +PDII+Y+ ++ GY +  R                            
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 43  -------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                  +DEA+ +F ++    + PN +T+  +I A C+ GR+ DA    S+M+  G K 
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNIVSYSILIDGLCKRGLMEEALYA 154
           N V Y  LI G+    ++  A ++  EM +  I  PNI  +S +I  LC  G +  A   
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           F+  +     PD+ T+  LI GYC  G+  +A  + D+M+  G  PD +  STL +   +
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635

Query: 215 S 215
           S
Sbjct: 636 S 636



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 8/205 (3%)

Query: 9   DAALK-LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT----CVQLKPNSI 63
           D AL  L  ++++ G  PD  +YNT+I   C  +R  EA+ +  ++T    C    P+ +
Sbjct: 217 DEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGC---SPDVV 273

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T++I     EG +  A  +F++M++KG   NVVTY+ ++    K++ M  A  V  +M
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +N+I P+ V+Y+ +I G    G  +EA   F       L+PD+VT+  L+   CK  R 
Sbjct: 334 FDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRS 393

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA +++ S+   G  PD +  S L
Sbjct: 394 KEAAEIFHSIATKGHKPDIISYSIL 418



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +     AA K+F ++ + G    I TY  I+ G C  N  DEA+ LF KL  + LK  
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE 727

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I A  K  R ++A  +F+ +   G   N  TY  +I    K  +++ A  ++ 
Sbjct: 728 IAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFS 787

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKA 180
            M +   +P+    + +I  L ++G + +A Y +   +D  ++  +  T ++LI  +   
Sbjct: 788 SMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGY-YMSKVDGTIISLEASTTSLLISLFASK 846

Query: 181 GRPTEAMQL 189
           GR  E ++ 
Sbjct: 847 GRYREQIKF 855


>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI E  +D A  L  ++   G   PD+++Y  II GYC L +++E   LF+++      P
Sbjct: 224 LINE--VDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAP 281

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+ TF  LID F K G M  A  ++SKML +G   +V T++ LI+G+F+ + +  A D++
Sbjct: 282 NTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMW 341

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M E NI  ++ +YS+L+ GLC    + +A        ++ ++P    Y  +I GYCK+
Sbjct: 342 HKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKS 401

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G   EA ++   M  N   PD L  + L
Sbjct: 402 GNVDEANKIVAEMEVNRCKPDKLTFTIL 429



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 117/215 (54%), Gaps = 3/215 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QLKPNSITF 65
           +D A KL   L   G  PD+ITYNT+I G C +N +D A  L  ++ C+  +  P+ +++
Sbjct: 193 IDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREV-CLNGEFAPDVVSY 251

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T++I  +CK  +M++ +++F +M+  G   N  T++ LIDG+ K  +M SA  +Y +M  
Sbjct: 252 TMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLV 311

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P++ +++ LI+G  +   + +A+  +H   + ++   + TY++L+ G C   R  +
Sbjct: 312 QGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHK 371

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           A  +   +  + I+P   + + + D   +S    E
Sbjct: 372 ARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDE 406



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 1/194 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI++  +  A+ LF +L     +P   T N +I G C +  +DEA +L + L      P
Sbjct: 151 VLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLP 210

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDV 119
           + IT+  LI   C    +D A  +  ++   G  A +VV+Y+ +I GY K + M+    +
Sbjct: 211 DVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLL 270

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM  +  +PN  +++ LIDG  K G M  AL  +   L    LPDV T+  LI G+ +
Sbjct: 271 FDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFR 330

Query: 180 AGRPTEAMQLYDSM 193
             +  +AM ++  M
Sbjct: 331 VRQVHQAMDMWHKM 344



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 1/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD + +L   +    +  + + YN +       N++ +AV LF +L  ++ KP + T  
Sbjct: 122 RLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVN 181

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI   C+ G +D+A  +   +   G   +V+TY+ LI G      +  A  +  E+C N
Sbjct: 182 ILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLN 241

Query: 127 N-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              +P++VSY+++I G CK   MEE    F   +++   P+  T+  LI G+ K G    
Sbjct: 242 GEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMAS 301

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+ LY  ML  G +PD    ++L +
Sbjct: 302 ALALYSKMLVQGCLPDVATFTSLIN 326



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 97/189 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           + +AL L+ ++  +G  PD+ T+ ++I G+  + ++ +A+ ++ K+    +  +  T+++
Sbjct: 299 MASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSV 358

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C   R+  A  +   + E         Y+ +IDGY KS N+  A  +  EM  N 
Sbjct: 359 LVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNR 418

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ ++++ILI G C +G M EA+  F   L     PD +T   L     KAG P EA 
Sbjct: 419 CKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAA 478

Query: 188 QLYDSMLRN 196
           ++ + + +N
Sbjct: 479 RVKEVLAQN 487



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PD      ++  Y  + RLD + +L   + C  +  N++ +  L +   ++ ++ DA
Sbjct: 102 GQIPDNRLLGFLVSSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDA 161

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++F +++    K    T + LI G  +   +  AF + +++      P++++Y+ LI G
Sbjct: 162 VVLFRELIRLRYKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHG 221

Query: 142 LC-------KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           LC        R L+ E        L+    PDVV+Y ++I GYCK  +  E   L+D M+
Sbjct: 222 LCLINEVDRARSLLREV------CLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMI 275

Query: 195 RNGIMPDGLLLSTLAD 210
            +G  P+    + L D
Sbjct: 276 NSGTAPNTFTFNALID 291



 Score = 43.9 bits (102), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D A K+  ++     +PD +T+  +I G+C   R+ EA+  F+K+  V   P+ I
Sbjct: 400 KSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEI 459

Query: 64  TFTILIDAFCKEGRMDDAT 82
           T   L     K G   +A 
Sbjct: 460 TVNNLRSCLLKAGMPGEAA 478


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 3/204 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+AL+LF  +     +P+ ITY T++ G C+  RLD A +L  ++      PN +TF 
Sbjct: 440 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+  FC++G MD+A  +  +M+E G   N++TY+ L+DG  K  N + A ++   +  N
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 556

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP+IV+YS +I  L +   +EEA+  FH   D  + P  V Y  ++   CK      A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +  M+ NG MP+ L   TL +
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIE 640



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 3/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A +    +   G  PD I+Y T++ G C   R ++A +L +++      PN +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF   I   C++G ++ ATM+  +M E G + N+VTY+ L++G+     + SA +++  M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN ++Y+ L+ GLC    ++ A       L     P+VVT+ +L+  +C+ G  
Sbjct: 452 ---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA++L + M+ +G  P+ +  +TL D   +   S+E
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++       G   D+  YNT++ GYC   +LD A +L   +    + P++ T+T +I 
Sbjct: 97  AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIR 153

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR+ +A  +   ML +G + +VVTY+ L++   KS     A +V +EM     +P
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP 213

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+++I+G+C+ G +++A    +        PD V+Y  +++G C A R  +  +L+
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M+    MP+ +    L  +
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRF 294



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      A+++  ++  +G  P+I+TYN II G C   R+D+A +   +L+    +P+++
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T ++   C   R +D   +F++M+EK    N VT+  L+  + +   ++ A  V E+M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N    +I+I+ +CK+G +++A    +        PD ++Y  +++G C+A R 
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +L   M+R    P+ +  +T 
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTF 396



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 35/227 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + +E  +D A +   +L+  G +PD ++Y T++ G C+  R ++  +LF ++      PN
Sbjct: 225 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 284

Query: 62  SITF-----------------------------------TILIDAFCKEGRMDDATMMFS 86
            +TF                                    I+I+  CK+GR+DDA    +
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   + ++Y+ ++ G  +++  + A ++ +EM   N  PN V+++  I  LC++G
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           L+E+A        ++    ++VTY  L+ G+C  GR   A++L+ SM
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA +L   +    + PD  TY  II G C   R+ EA+ L + +     +P+ +T+T
Sbjct: 128 QLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 184

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++A CK      A  +  +M  KG   N+VTY+ +I+G  +   +  A +    +   
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ VSY+ ++ GLC     E+    F   ++ + +P+ VT+ +L+R +C+ G    A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304

Query: 187 MQLYDSMLRNG 197
           +Q+ + M  +G
Sbjct: 305 IQVLEQMSGHG 315



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 101/209 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA +L  ++  +   P+++T+N ++  +C    +DEA++L E++      PN IT+ 
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D   K+   ++A  +   ++  G   ++VTYS +I    +   ++ A  ++  + + 
Sbjct: 532 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P  V Y+ ++  LCKR   + A+  F   + N  +P+ +TY  LI G        E 
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 651

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
             L   +   G++   LL      ++ Q+
Sbjct: 652 RDLLRELCSRGVLNKNLLEEWRPKFSNQT 680



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 5/208 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI    L  A +L  + T RG  PD+     +I   C   R  +A ++           +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVY 120
              +  L+  +C+ G++D A  + + M    P A +  TY+ +I G      +  A  + 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M      P++V+Y++L++ +CK     +A+            P++VTY ++I G C+ 
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GR  +A +  + +   G  PD +  +T+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTV 256



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 69/127 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K+C+ + AL+L   L   G+ PDI+TY++II      +R++EA+++F  +  + ++P 
Sbjct: 537 ITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 596

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  ++ A CK    D A   F+ M+  G   N +TY  LI+G      +K   D+  
Sbjct: 597 AVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLR 656

Query: 122 EMCENNI 128
           E+C   +
Sbjct: 657 ELCSRGV 663



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 38/175 (21%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           L EA +L ++ T     P+    T LI   C+ GR  DA  +       G          
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG---------- 108

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
                       +A DV+             +Y+ L+ G C+ G ++ A           
Sbjct: 109 ------------TAVDVF-------------AYNTLVAGYCRYGQLDAARRLIA---SMP 140

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + PD  TY  +IRG C  GR  EA+ L D ML  G  P  +  + L +   +S+G
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 43/92 (46%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +E  ++ A+K+F  + D G+ P  + YN I+   C     D A+  F  +      P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           N +T+  LI+    E  + +   +  ++  +G
Sbjct: 631 NELTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 16/205 (7%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D ALK+   +   G+E +I TYNT+ CG C +                 + PN +
Sbjct: 318 RKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMG----------------VVPNYV 361

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI   CK+G M +A  +F +M EKG   +V+TYS +I GY K   ++ A    +EM
Sbjct: 362 TYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEM 421

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P++ +Y+ L+ G C  G ++ AL  F         P+VV Y  LI G  K GR 
Sbjct: 422 EKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 481

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A QLYD ML+ G++PD  L S L
Sbjct: 482 EAAFQLYDDMLKAGLIPDDSLYSAL 506



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 19/207 (9%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF ++    +  D+  Y  +I  YC    +  A ++ ++     ++PN  T+ +LI  FC
Sbjct: 223 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFC 282

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---------- 123
           K G+M+ A M+ + M  +G   N + ++ +IDGY +   +  A  +   M          
Sbjct: 283 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIY 342

Query: 124 ---------CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
                    C   + PN V+Y+ LI   CK G M EA   F    +    P V+TY+++I
Sbjct: 343 TYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMI 402

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            GY K GR  EA +    M + G +PD
Sbjct: 403 HGYAKKGRIREAERFRKEMEKKGFVPD 429



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 77/139 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +LF ++ ++G  P ++TY+ +I GY    R+ EA +  +++      P+  
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G++D A  +F +M ++G + NVV Y+ LI G  K    ++AF +Y++M
Sbjct: 432 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 491

Query: 124 CENNISPNIVSYSILIDGL 142
            +  + P+   YS L+  L
Sbjct: 492 LKAGLIPDDSLYSALVGSL 510



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + G+E  + TY  ++    +   + +   LF ++    +  +   +T +I+A+C+ G 
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           M  A  +  + +  G + N  TY  LI G+ K   M++A  +  +M    +  N + ++ 
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311

Query: 138 LIDGLCKRGLMEEAL---------------YAFH---CAL-DNHLLPDVVTYAILIRGYC 178
           +IDG C++G++++AL               Y ++   C L    ++P+ VTY  LI  +C
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           K G   EA +L+  M   G  P  L  S +
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVM 401



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 90/180 (50%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           + ++ G C   R+D+A +L + +    +  N++ +  L+D + ++        +   M  
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           +G +A V TY+ L+D    ++++     ++ EM  NN+  ++  Y+ +I+  C+ G M  
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A       + N + P+  TY +LI+G+CK G+   A  L   M   G+  + ++ +T+ D
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 314



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 97/208 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +L   +   G+  + + YN+++  Y          ++ E +    ++  
Sbjct: 141 LCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEAT 200

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TIL+D+      +     +F++M       +V  Y+ +I+ Y ++ NM+ A  V +
Sbjct: 201 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 260

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E   N + PN  +Y +LI G CK G ME A           +  + + +  +I GYC+ G
Sbjct: 261 ECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 320

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              +A+++  +M + G+  +    +TLA
Sbjct: 321 MVDDALKIKAAMEKIGVELNIYTYNTLA 348



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D ALKLF ++  RG EP+++ Y  +I G     R + A QL++ +    L P+   ++ 
Sbjct: 446 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSA 505

Query: 68  LIDAFCKEGRMD 79
           L+ +   + R D
Sbjct: 506 LVGSLHTDNRKD 517


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 3/204 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+AL+LF  +     +P+ ITY T++ G C+  RLD A +L  ++      PN +TF 
Sbjct: 471 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 527

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+  FC++G MD+A  +  +M+E G   N++TY+ L+DG  K  N + A ++   +  N
Sbjct: 528 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 587

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP+IV+YS +I  L +   +EEA+  FH   D  + P  V Y  ++   CK      A
Sbjct: 588 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 647

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +  M+ NG MP+ L   TL +
Sbjct: 648 IDFFAYMVSNGCMPNELTYITLIE 671



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 3/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A +    +   G  PD I+Y T++ G C   R ++A +L +++      PN +
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 422

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF   I   C++G ++ ATM+  +M E G + N+VTY+ L++G+     + SA +++  M
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN ++Y+ L+ GLC    ++ A       L     P+VVT+ +L+  +C+ G  
Sbjct: 483 ---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA++L + M+ +G  P+ +  +TL D   +   S+E
Sbjct: 540 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++       G   D+  YNT++ GYC   +LD A +L   +    + P++ T+T +I 
Sbjct: 128 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIR 184

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR+ +A  +   ML +G + +VVTY+ L++   KS     A +V +EM     +P
Sbjct: 185 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP 244

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+++I+G+C+ G +++A    +        PD V+Y  +++G C A R  +  +L+
Sbjct: 245 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 304

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M+    MP+ +    L  +
Sbjct: 305 AEMMEKNCMPNEVTFDMLVRF 325



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      A+++  ++  +G  P+I+TYN II G C   R+D+A +   +L+    +P+++
Sbjct: 223 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T ++   C   R +D   +F++M+EK    N VT+  L+  + +   ++ A  V E+M
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N    +I+I+ +CK+G +++A    +        PD ++Y  +++G C+A R 
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 402

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +L   M+R    P+ +  +T 
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTF 427



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 35/227 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + +E  +D A +   +L+  G +PD ++Y T++ G C+  R ++  +LF ++      PN
Sbjct: 256 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 315

Query: 62  SITF-----------------------------------TILIDAFCKEGRMDDATMMFS 86
            +TF                                    I+I+  CK+GR+DDA    +
Sbjct: 316 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 375

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   + ++Y+ ++ G  +++  + A ++ +EM   N  PN V+++  I  LC++G
Sbjct: 376 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 435

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           L+E+A        ++    ++VTY  L+ G+C  GR   A++L+ SM
Sbjct: 436 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA +L   +    + PD  TY  II G C   R+ EA+ L + +     +P+ +T+T
Sbjct: 159 QLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 215

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++A CK      A  +  +M  KG   N+VTY+ +I+G  +   +  A +    +   
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ VSY+ ++ GLC     E+    F   ++ + +P+ VT+ +L+R +C+ G    A
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 335

Query: 187 MQLYDSMLRNG 197
           +Q+ + M  +G
Sbjct: 336 IQVLEQMSGHG 346



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 101/209 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA +L  ++  +   P+++T+N ++  +C    +DEA++L E++      PN IT+ 
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 562

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D   K+   ++A  +   ++  G   ++VTYS +I    +   ++ A  ++  + + 
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P  V Y+ ++  LCKR   + A+  F   + N  +P+ +TY  LI G        E 
Sbjct: 623 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 682

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
             L   +   G++   LL      ++ Q+
Sbjct: 683 RDLLRELCSRGVLNKNLLEEWRPKFSNQT 711



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 5/199 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  + T RG  PD+     +I   C   R  +A ++           +   +  L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            +C+ G++D A  + + M    P A +  TY+ +I G      +  A  + ++M      
Sbjct: 153 GYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+Y++L++ +CK     +A+            P++VTY ++I G C+ GR  +A + 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 190 YDSMLRNGIMPDGLLLSTL 208
            + +   G  PD +  +T+
Sbjct: 269 LNRLSSYGFQPDTVSYTTV 287



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 69/127 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K+C+ + AL+L   L   G+ PDI+TY++II      +R++EA+++F  +  + ++P 
Sbjct: 568 ITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 627

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  ++ A CK    D A   F+ M+  G   N +TY  LI+G      +K   D+  
Sbjct: 628 AVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLR 687

Query: 122 EMCENNI 128
           E+C   +
Sbjct: 688 ELCSRGV 694



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 38/173 (21%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
            A +L ++ T     P+    T LI   C+ GR  DA  +       G            
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG------------ 139

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
                     +A DV+             +Y+ L+ G C+ G ++ A           + 
Sbjct: 140 ----------TAVDVF-------------AYNTLVAGYCRYGQLDAARRLIA---SMPVA 173

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           PD  TY  +IRG C  GR  EA+ L D ML  G  P  +  + L +   +S+G
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 226



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 43/92 (46%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +E  ++ A+K+F  + D G+ P  + YN I+   C     D A+  F  +      P
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 661

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           N +T+  LI+    E  + +   +  ++  +G
Sbjct: 662 NELTYITLIEGLANEDFLKETRDLLRELCSRG 693


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++A +LF  +  +G EPD+I+YN +I GY    +++EA++L+ ++  V  +PN IT+  
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G++DDA  +FS M   G   N  TY   +DG  K+  +  A  ++ E+  +N
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               I + + LIDGLCK G +E A   F    +    P+VVTY I+I G+C+ G+  +A 
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 490

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M  NG  PD +  +TL
Sbjct: 491 VLIQKMEANGCTPDIITYNTL 511



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H      L+ Q+   GL  D  T N ++   C++NRL E    F  +      PN
Sbjct: 79  LAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPN 138

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   C E R+ +AT +F +M + G   +VVTY  LI G   + N+  A  +++
Sbjct: 139 IVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198

Query: 122 EMC------ENNISPNIVSYSILIDGLCKRGLMEEALYAF----------HCALDNHLLP 165
           EM       E N  PN+++Y+I++DGLCK G  +EA   F          +  LD  L P
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQP 258

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D+VT+ +LI   CK G+  EA +L   M+ +GI+PD +  ++L +
Sbjct: 259 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 303



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 16/213 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC------VQL 58
           E  +  A +LF ++   G  PD++TY T+I G C    ++ A++L +++        +  
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMF----------SKMLEKGPKANVVTYSCLIDGYF 108
           KPN IT+ I++D  CK GR D+A  +F          ++ML++G + ++VT++ LID   
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLC 271

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           K   +  A  +   M E+ I P++V+Y+ LI+G C  G +  A   F         PDV+
Sbjct: 272 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI 331

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +Y +LI GY K  +  EAM+LY+ ML  G  P+
Sbjct: 332 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 364



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 108/185 (58%), Gaps = 10/185 (5%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS----------ITFTILIDAFC 73
           +P++ITYN I+ G C + R DEA QLFE++    + PN           +TF +LID  C
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLC 271

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           KEG++ +A  +   M+E G   ++VTY+ LI+G+    ++ SA +++  M      P+++
Sbjct: 272 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI 331

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           SY++LI+G  K   +EEA+  ++  L     P+V+TY  L++G   AG+  +A +L+  M
Sbjct: 332 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 391

Query: 194 LRNGI 198
             +GI
Sbjct: 392 KAHGI 396



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 91/159 (57%), Gaps = 5/159 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KLF +L     + +I   N +I G C   +L+ A +LFEKL+    +PN +T+TI+I 
Sbjct: 419 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 478

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+EG++D A ++  KM   G   +++TY+ L+ G+++S  ++    +   M + ++SP
Sbjct: 479 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 538

Query: 131 NIVSYSILIDGLCKRGLMEEAL-----YAFHCALDNHLL 164
           + ++ SI++D L K    +E L     +     +D HLL
Sbjct: 539 DAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLL 577



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 98/177 (55%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ D+GL+PD++T+N +I   C   ++ EA +L   +    + P+ +T+  LI+ FC  G
Sbjct: 250 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 309

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            ++ A  +F  M  KG + +V++Y+ LI+GY K+  ++ A  +Y EM      PN+++Y 
Sbjct: 310 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 369

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            L+ G+   G +++A   F     + +  +  TY I + G CK     EAM+L+  +
Sbjct: 370 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 6/200 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F  +      P + ++N ++ G   +    +   L+ ++    L  +  T  IL++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C   R+ +    F+ +L +G   N+VTY+ LI G      +  A  ++  M +   +P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDN------HLLPDVVTYAILIRGYCKAGRPT 184
           ++V+Y  LI GLC  G +  AL      L++      +  P+V+TY I++ G CK GR  
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 185 EAMQLYDSMLRNGIMPDGLL 204
           EA QL++ M   G++P+ +L
Sbjct: 233 EAKQLFEEMKTQGMIPNEML 252



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 92/182 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A KLF  +   G+  +  TY   + G C  + L EA++LF +L     K        
Sbjct: 381 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 440

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G+++ A  +F K+  +G + NVVTY+ +I G+ +   +  A  + ++M  N 
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+I++Y+ L+ G  +   +EE +   H      + PD +T +I++    K  +  E +
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 560

Query: 188 QL 189
            L
Sbjct: 561 HL 562



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 2/138 (1%)

Query: 73  CKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           CK G +    A   F  M+   P  ++ +++ L+ G  K ++    F +Y +M  + +S 
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  + +IL++ LC    + E   AF   L     P++VTY  LI+G C   R +EA +L+
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G  PD +   TL
Sbjct: 163 LRMQKLGCTPDVVTYGTL 180


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C    AL LF ++TDRG+ P+ I Y+ ++ G C   ++ +A +LF K+       +
Sbjct: 208 LCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRD 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +L++ FCK G +DDA  +   + + G    V+ Y CLI+G F+++  + A   Y+
Sbjct: 268 LITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQ 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   NI P+++ Y+I+I GL + G + EAL       +  L PD + Y  LI+G+C  G
Sbjct: 328 KMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG 387

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA  L   + ++   P+    S L
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSIL 414



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 16/233 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  AL L G++T+RGL PD I YN +I G+C +  LDEA  L  +++     PN
Sbjct: 348 LSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPN 407

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++ILI   CK G ++ A  +F +M + G   +VVT++ LI+G  K+  ++ A  ++ 
Sbjct: 408 NHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFY 467

Query: 122 EMCENNISP--------------NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
           +M E    P              +I S  ++++ LC+ G++ +A       +D+ +LPD+
Sbjct: 468 QM-EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            TY ILI G+CK G    A +L+  M   G MPD +   TL D  L  +G  E
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID-GLYRAGRNE 578



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 109/193 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL ++ Q+    L PD++TY  +I G C   +  +A+ LF+++T   + PN I ++I++ 
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  ++ DA  +FSKM   G   +++TY+ L++G+ KS  +  AF + + + ++    
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            ++ Y  LI+GL +    EEA   +   L  ++ PDV+ Y I+IRG  + GR TEA+ L 
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361

Query: 191 DSMLRNGIMPDGL 203
             M   G+ PD +
Sbjct: 362 GEMTERGLRPDTI 374



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 100/190 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +LD A  L   LT  G    +I Y  +I G     R +EA   ++K+    +KP+ +
Sbjct: 280 KSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM 339

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +TI+I    +EGR+ +A  +  +M E+G + + + Y+ LI G+     +  A  +  E+
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +++  PN  +YSILI G+CK GL+ +A + F        LP VVT+  LI G CKA R 
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459

Query: 184 TEAMQLYDSM 193
            EA  L+  M
Sbjct: 460 EEARLLFYQM 469



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 15/203 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI---- 63
           ++ A  +F ++   G  P ++T+N++I G C  NRL+EA  LF ++  V+ KP+      
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSLFLRLS 482

Query: 64  ----------TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
                     +  ++++  C+ G +  A  +  ++++ G   ++ TY+ LI+G+ K  N+
Sbjct: 483 QGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             AF +++EM      P+ V+Y  LIDGL + G  E+AL  F   +    +P+  TY  +
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602

Query: 174 IRGYCKAGRPTEAMQLYDSMLRN 196
           +   C+    + A+ ++   LR+
Sbjct: 603 MTWSCRENNISLALSVWMKYLRD 625



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 86/157 (54%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           N  +   ++ ++L    +K +S  F++LI+A+ + G  + A   F  M +   K ++  +
Sbjct: 107 NAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAF 166

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + ++    + +    A  VY +M + N++P++V+Y ILI GLCK    ++AL  F    D
Sbjct: 167 NLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
             +LP+ + Y+I++ G C+A +  +A +L+  M  +G
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 98/196 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIKE   +   K+  +L +  ++     ++ +I  Y      ++AV+ F  +     KP+
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPD 162

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F +++    ++     A  ++++ML+     +VVTY  LI G  K+   + A  +++
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I PN + YSI++ GLC+   + +A   F     +    D++TY +L+ G+CK+G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 182 RPTEAMQLYDSMLRNG 197
              +A  L   + ++G
Sbjct: 283 YLDDAFTLLQLLTKDG 298



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 74/142 (52%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I    KE   +    +  ++     K +   +S LI+ Y ++   + A + +  M + 
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDF 157

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  P++ ++++++  L ++     AL  ++  L  +L PDVVTY ILI G CK  +  +A
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L+D M   GI+P+ ++ S +
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIV 239



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 13/201 (6%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A KLF ++  +G  PD +TY T+I G     R ++A+++FE++      P S T+ 
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600

Query: 67  ILIDAFCKEGRMDDATMMFSKMLE-----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++   C+E  +  A  ++ K L      +  K  VV  S      F ++ +++A     
Sbjct: 601 TIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAES------FDNEELQTAIRRLL 654

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   + + ++  Y+I + GL +     EA   F    D  +     +  +LI   C   
Sbjct: 655 EMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVE 714

Query: 182 RPTEAMQLYDSMLRNG--IMP 200
               AM ++   L  G  +MP
Sbjct: 715 NLDMAMDVFLFTLERGFRLMP 735


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++  ++ ++ ++P + TY  I+ G   ++RLDEA  LFE+     ++ N +
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  +M++KG   NV T++ L+D   K++ +  A   ++ M
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    PN  +YSILI+GLC+     +A   +       L+P+VVTY  +I G  K G  
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 789

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           T+A  L++    NG +PD    + L
Sbjct: 790 TDAYSLFERFKANGGIPDAASFNAL 814



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 108/197 (54%), Gaps = 4/197 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTILIDA 71
           +F  +  +G   D   YN ++ G+C   ++ +A ++ E++   CVQ  P   T+  ++D 
Sbjct: 585 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ--PTVATYGAIVDG 642

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             K  R+D+A M+F +   KG + NVV YS LIDG+ K   +  A+ + EEM +  ++PN
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           + +++ L+D L K   + EAL  F    +    P+  TY+ILI G C+  +  +A   + 
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762

Query: 192 SMLRNGIMPDGLLLSTL 208
            M + G++P+ +  +T+
Sbjct: 763 DMQKQGLVPNVVTYTTM 779



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 1/204 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             + A KL  +L +RG  P ++++N+I+       ++DEA+ LFE +     +PNS T+ 
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYN 392

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+ID  C  GR+++A  +  +M       N++T + ++D   K++ ++ A+ ++E   + 
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P+ V+Y  LIDGL K+G ++EA   F   LD     + V Y  LIR +   GR  + 
Sbjct: 453 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 512

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  ++R G  PD  LL+T  D
Sbjct: 513 HKIFKELIRRGCKPDLTLLNTYMD 536



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 103/196 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  LF +   +G+E +++ Y+++I G+  + R+DEA  + E++    L PN
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+DA  K   +++A + F  M E     N  TYS LI+G  + Q    AF  ++
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  + PN+V+Y+ +I GL K G + +A   F     N  +PD  ++  LI G   A 
Sbjct: 763 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822

Query: 182 RPTEAMQLYDSMLRNG 197
           R  EA Q+++     G
Sbjct: 823 RAMEAYQVFEETRLRG 838



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 104/198 (52%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F +L  RG +PD+   NT +        +++   +FE +      P+  +++ILI   
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G+  + + +F  M ++G   +   Y+ ++DG+ KS  +  A+++ EEM E  + P +
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +Y  ++DGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M++ G+ P+    ++L D
Sbjct: 694 MMKKGLTPNVYTWNSLLD 711



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A K+F   + RG  PD +TY ++I G     ++DEA +LFEK+       N
Sbjct: 433 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 492

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T LI  F   GR +D   +F +++ +G K ++   +  +D  FK+  ++    ++E
Sbjct: 493 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 552

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++      P++ SYSILI GL K G   E    FH         D   Y  ++ G+CK+G
Sbjct: 553 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 612

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  +A ++ + M    + P
Sbjct: 613 KVHKAYEILEEMKEKCVQP 631



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 104/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A ++  ++    L P+++T N ++   C   +L+EA ++FE  +     P+ +T+ 
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K+G++D+A  +F KML+ G  AN V Y+ LI  +F     +    +++E+   
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++   +  +D + K G +E+    F        LPDV +Y+ILI G  KAG+  E 
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             ++ +M + G   D    + + D
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVD 606



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 12/232 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  AL L  ++    LEPDI+ YN  I  +     +D A + F +L    LKP+
Sbjct: 224 LAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPD 283

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++T +I   CK GR+ +A  +F++M  +        Y+ +I GY  +   + A+ + E
Sbjct: 284 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 343

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + E    P++VS++ ++  L K+  ++EAL  F   +     P+  TY I+I   C  G
Sbjct: 344 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEPNSSTYNIIIDMLCLGG 402

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD-----------YNLQSSGSQEHC 222
           R  EA ++ D M    + P+ L ++ + D           Y +  S SQ  C
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 454



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 91/199 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   LD A+     +      P    Y  +I       R + A++L  ++  V  +  
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT L+ A  +EG++ DA  +  ++     + ++V Y+  ID + K+ N+  A+  + 
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P+ VSY+ +I  LCK G + EA   F        +P    Y  +I GY  AG
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  +A +L + +   G +P
Sbjct: 334 RFEDAYKLLERLRERGCIP 352



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 72/150 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ AL  F  + +    P+  TY+ +I G C + + ++A   ++ +    L PN
Sbjct: 713 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 772

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +I    K G + DA  +F +    G   +  +++ LI+G   +     A+ V+E
Sbjct: 773 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFE 832

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           E        NI S   L+D L K   +E+A
Sbjct: 833 ETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 63/141 (44%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L  A  +  R+DDA +  + M     +     Y+ LI    +++  + A ++  +M E  
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               +  ++ L+  L + G + +AL        + L PD+V Y + I  + KAG    A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           + +  +   G+ PD +  +++
Sbjct: 270 KFFHELKAQGLKPDDVSYTSM 290


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 104/181 (57%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G+ PD +TYN II G C    L +A +L  K+    L+P+ IT+T LI A C+ G + +
Sbjct: 512 KGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLRE 571

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  + + M+  G + +VVTY+ L+    +  N+ SA+  + +M +  I PN ++Y++LI 
Sbjct: 572 ARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 631

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            LC  G    A   FH  L+  L P+  TY +LI G C+ G   +A++LY  M +NGI P
Sbjct: 632 ALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 691

Query: 201 D 201
           D
Sbjct: 692 D 692



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 111/206 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  A + F ++  +GL+PD   YNT IC   +L+    A QL E +    + P+++T+ 
Sbjct: 463 NLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYN 522

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK G + DA  + +KM+  G + + +TY+CLI  + +   ++ A  +   M  +
Sbjct: 523 VIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSD 582

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+IL+   C+RG +  A   F   LD  + P+ +TY +LI   C  GR   A
Sbjct: 583 GLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLA 642

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYN 212
            + +  ML  G+ P+    + L D N
Sbjct: 643 FRHFHEMLERGLAPNKYTYTLLIDGN 668



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 105/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  AL L G L   GL P ++TYNT+I GYC L  L EA +L E++      P+  
Sbjct: 390 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVC 449

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TIL++   K   +  A   F +ML KG + +   Y+  I       +   AF + E M
Sbjct: 450 TYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVM 509

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+ V+Y+++IDGLCK G +++A       + + L PD +TY  LI  +C+ G  
Sbjct: 510 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLL 569

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA +L + M+ +G+ P 
Sbjct: 570 REARKLLNGMVSDGLQPS 587



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L  A +L  ++   GL+PD ITY  +I  +C    L EA +L   +    L+P+
Sbjct: 528 LCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPS 587

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TIL+   C+ G +  A   F KML+ G + N +TY+ LI     +     AF  + 
Sbjct: 588 VVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFH 647

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           EM E  ++PN  +Y++LIDG C+ G   +A+  +     N + PD  T+  L +G+
Sbjct: 648 EMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 3/212 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV--QL 58
           +L      D    ++G++    +EP I+TYNT++  +    R DEA  L +++       
Sbjct: 211 VLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGF 270

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             N +TF ++I    +EG +++A  +   M     KA+  TY+ LI    +   ++ A  
Sbjct: 271 SLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEA 329

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +  EM    I P +V+Y+ +I GL K    E A   F       LLPDV+TY  L+  YC
Sbjct: 330 LQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYC 389

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           KAG   EA+ L   + R G+ P  L  +TL D
Sbjct: 390 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 421



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A  L  ++ + G+ P ++TYN II G     + + A   F ++  + L P+
Sbjct: 318 LLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPD 377

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  L++ +CK G + +A  +   +   G    V+TY+ LIDGY +  ++  A  + E
Sbjct: 378 VITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKE 437

Query: 122 EMCENNISPNIVSYSILIDGLCK-------RGLMEEAL--------YAFH---CA----- 158
           EM E    P++ +Y+IL++G  K       R   +E L        +A++   CA     
Sbjct: 438 EMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLS 497

Query: 159 ------------LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                       +   + PD VTY ++I G CK G   +A +L   M+ +G+ PD
Sbjct: 498 STPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E HL+ A+KL   +     +    TYN +I        + +A  L  ++    + P 
Sbjct: 284 LAREGHLENAVKLVDSMR-LSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPT 342

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I    K  + + A + F++M   G   +V+TY+ L++ Y K+ N+K A  +  
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++    ++P +++Y+ LIDG C+ G + EA       ++    PDV TY IL+ G  K  
Sbjct: 403 DLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVR 462

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A + +D ML  G+ PD
Sbjct: 463 NLAMAREFFDEMLSKGLQPD 482


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 10/220 (4%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L     +  A  +F  + ++G  PD +TY TII  +  +  ++ A ++ E +    + P
Sbjct: 327 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 386

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +   +  L+D + K  R+D A  ++ +M+  G K N VT++ L+ G FK      AF ++
Sbjct: 387 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 446

Query: 121 EEMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +EM E   + P +VSY+ILIDGL K G + EA   F   +D  ++P+  TY  LI    K
Sbjct: 447 KEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506

Query: 180 AGRPTEAMQLYDSMLRNGIMPD---------GLLLSTLAD 210
           AGR  EA +L + M++ G+ PD         GL+ S++ D
Sbjct: 507 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVD 546



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 97/195 (49%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D+I+Y T+I G     R+DEA +LFE+L      PN + +T +ID   K GR++D    F
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 166

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M          TY+ +IDG  K+Q +  A  V+E+M +    P+ ++Y+ LIDG  K 
Sbjct: 167 EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 226

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
             M+EA       L     P  VTY  ++ G+CK     EA ++   M   G  P   + 
Sbjct: 227 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 286

Query: 206 STLADYNLQSSGSQE 220
           ++L  Y L    ++E
Sbjct: 287 TSLLSYYLSKGRAEE 301



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 113/205 (55%), Gaps = 8/205 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K F  + D G EPD+I + T+I G+C   +     +L  +    + +P+   +T 
Sbjct: 23  MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQ-ALKRFRPDVFLYTS 81

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +I  +CK G +D  T  F  +    PKA  +V++Y+ +I G   S+ +  A +++EE+  
Sbjct: 82  VIHGYCKAGDLD--TGYFRAVT---PKASLDVISYTTVIKGLADSKRIDEACELFEELKT 136

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              SPN+V+Y+ +IDGL K G +E+ L  F     +  +P   TY ++I G CKA    +
Sbjct: 137 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPD 196

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A ++++ M++ G +PD +  +TL D
Sbjct: 197 ACKVFEQMVQKGCVPDTITYTTLID 221



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 40/251 (15%)

Query: 6   CHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C LD    A ++  Q+ +RG EP +  + +++  Y S  R +EA Q+  ++T     P+ 
Sbjct: 259 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 318

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI------------------ 104
           I +T LID     GR+ +A  +F  M+EKG   + +TY  +I                  
Sbjct: 319 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL 378

Query: 105 -----------------DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
                            DGY K + +  AF VY+ M  + I PN V++++L+ GL K G 
Sbjct: 379 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 438

Query: 148 MEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + A   F   L+   + P +V+Y ILI G  KAGR +EA   +  M+  GI+P+    +
Sbjct: 439 TDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYT 498

Query: 207 TLADYNLQSSG 217
           +L  Y+L  +G
Sbjct: 499 SLI-YSLAKAG 508



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 100/207 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++  LK F +++     P   TY  +I G C    L +A ++FE++      P+
Sbjct: 153 LLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 212

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T LID F K  +MD+A  +   ML KGP+   VTY  ++ G+ K   +  A +V  
Sbjct: 213 TITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIA 272

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    P +  ++ L+     +G  EEA             PDV+ Y  LI      G
Sbjct: 273 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTG 332

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  ++DSM+  G  PD L   T+
Sbjct: 333 RVPEARHVFDSMIEKGCAPDALTYGTI 359



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 102/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +LF +L   G  P+++ Y  +I G     R+++ ++ FE+++     P   T+T
Sbjct: 123 RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYT 182

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK   + DA  +F +M++KG   + +TY+ LIDG+ K+  M  A  + + M   
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P  V+Y  ++ G CK  ++ EA        +    P +  +  L+  Y   GR  EA
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            Q+   M   G  PD +L ++L D
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLID 326



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A K+F Q+  +G  PD ITY T+I G+   +++DEA +L + +     +P 
Sbjct: 188 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 247

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  ++  FCK   +++A  + ++M E+G +  +  ++ L+  Y      + A+ V  
Sbjct: 248 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 307

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +P+++ Y+ LID L   G + EA + F   ++    PD +TY  +I+ + K G
Sbjct: 308 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 367

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A ++ + M ++G+ PD    ++L D
Sbjct: 368 NVEAAGEILELMAKSGVGPDCFAYNSLMD 396



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 1/181 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPN 61
           +K   +D A  ++ ++   G++P+ +T+N ++ G     + D A  LF E L   ++ P 
Sbjct: 399 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++TILID   K GR+ +A + F +M+++G      TY+ LI    K+  +  A  + E
Sbjct: 459 LVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 518

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++P++ +YS LI GL    +++ A   F   +     P+ VTY +L RG+  AG
Sbjct: 519 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578

Query: 182 R 182
           R
Sbjct: 579 R 579



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P IVSY+ +I GL     M+EA   F+  +DN   PDV+ +  LI G+CKAG+P    +L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 190 YDSMLRNGIMPDGLLLSTL 208
            +  L+    PD  L +++
Sbjct: 65  LNQALKR-FRPDVFLYTSV 82



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 37/79 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A KL   +   G+ PD+  Y+ +I G    + +D A  +F+++      PN
Sbjct: 504 LAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 563

Query: 62  SITFTILIDAFCKEGRMDD 80
            +T+ +L   F   GR  D
Sbjct: 564 EVTYKVLRRGFRAAGRALD 582


>gi|356520039|ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 585

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 36/228 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL +F ++ ++G+   +ITYN    G C   +  EAV++  ++  V L PN +T+ I
Sbjct: 322 VDKALNVFAEMREKGIAYGVITYNX--GGLCRGKKFGEAVKIVHQVNKVGLSPNIVTYNI 379

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC  G++D A  +F+++   G    +VTY+ LI GY K +N+  A D+ +EM E  
Sbjct: 380 LINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 439

Query: 128 ISPNIVSYSILID----------------------------------GLCKRGLMEEALY 153
           I P+ V+Y ILID                                  GLC  G M+EA  
Sbjct: 440 IPPSKVTYXILIDAFARLNYTKKTCEMHSLMEKSGLVSDVXHSVLIHGLCMNGNMKEASK 499

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 + HL P+ V Y  +I GYCK G    A++L++ M+ + ++P+
Sbjct: 500 LLKSLGELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPN 547



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 1/187 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++LF QL   GL P ++TYNT+I GY  +  L  A+ L +++    + P+ +T+ I
Sbjct: 390 IDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIPPSKVTYXI 449

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDAF +         M S ++EK    + V +S LI G   + NMK A  + + + E +
Sbjct: 450 LIDAFARLNYTKKTCEMHS-LMEKSGLVSDVXHSVLIHGLCMNGNMKEASKLLKSLGELH 508

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ +I G CK G    AL  F+  + + ++P+V ++   I   C+  +  EA 
Sbjct: 509 LEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFCSTIGLLCRDEKWQEAE 568

Query: 188 QLYDSML 194
            L    L
Sbjct: 569 LLLGQFL 575



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 37/238 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICG-------------YCSLNRLD---------- 44
           L    +L   L + G   +++ Y T+I G             +C+++RL           
Sbjct: 217 LMKGFRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGV 276

Query: 45  ------------EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
                       E   ++E +    + PN+  +  +I  +C    +D A  +F++M EKG
Sbjct: 277 LMNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKG 336

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
               V+TY+    G  + +    A  +  ++ +  +SPNIV+Y+ILI+G C  G ++ A+
Sbjct: 337 IAYGVITYN--XGGLCRGKKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAV 394

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             F+    N L P +VTY  LI GY K      A+ L   M    I P  +    L D
Sbjct: 395 RLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIPPSKVTYXILID 452



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 40/250 (16%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LI+    D A  +F +   R +  D  ++  +I G C    L +  +L   L       
Sbjct: 176 LLIRSNCFDIAWWVFNEF-KRKVVMDAYSFGIMIKGRCEAGDLMKGFRLLAMLEEFGFSL 234

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + +T LI   CK G +  A  +F  M   G  AN  +   L++G+FK    +  F +Y
Sbjct: 235 NVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGVLMNGFFKQGLQREGFXMY 294

Query: 121 EEMCENNISPNIVSYSILID---------------------------------GLCKRGL 147
           E M  + I PN  +Y+ +I                                  GLC+   
Sbjct: 295 ENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVITYNXGGLCRGKK 354

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
             EA+   H      L P++VTY ILI G+C  G+   A++L++ +  NG+ P      T
Sbjct: 355 FGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLSP------T 408

Query: 208 LADYNLQSSG 217
           L  YN   +G
Sbjct: 409 LVTYNTLIAG 418



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 44/83 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A KL   L +  LEP+ + YNT+I GYC       A++LF ++   ++ PN  +F 
Sbjct: 493 NMKEASKLLKSLGELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFC 552

Query: 67  ILIDAFCKEGRMDDATMMFSKML 89
             I   C++ +  +A ++  + L
Sbjct: 553 STIGLLCRDEKWQEAELLLGQFL 575


>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A+++F ++   G  P I +YNT+I GYC+   L+  ++L   +    ++P+ +
Sbjct: 193 KWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDV 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+ FC+ G++ +A  +FS+M       N +TY+ LI+GY +  N +    +++EM
Sbjct: 253 TFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEM 312

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N I  +I++Y+ LI GLC  G  ++A Y        +L+P+  T++ LI G C     
Sbjct: 313 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNS 372

Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTL 208
             A QLY SM+R+G  P+     +L+ST 
Sbjct: 373 ERAFQLYKSMIRSGCHPNYHTFKMLISTF 401



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 105/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +F Q+ D G  P + + N  I    SL R D A+  + ++   ++ PN  T  +
Sbjct: 127 LRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNM 186

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++ AFCK G+++ A  +F KM   G    + +Y+ LI GY     + S   +   M +N 
Sbjct: 187 VMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG 246

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V+++ LI+G C+ G + EA   F     N ++P+ +TY  LI GY + G      
Sbjct: 247 VRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 306

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+D MLRNGI  D L  + L
Sbjct: 307 RLHDEMLRNGIKADILTYNAL 327



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 1/213 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L++ +KL   +   G+ PD +T+NT+I G+C   +L EA ++F ++    + PN+IT+  
Sbjct: 232 LNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 291

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ + + G  +    +  +ML  G KA+++TY+ LI G       K A  + +E+   N
Sbjct: 292 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 351

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  ++S LI G C R   E A   +   + +   P+  T+ +LI  +CK      A+
Sbjct: 352 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAV 411

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++   M    I PD   LS L    L  SG +E
Sbjct: 412 EVVREMSERSIAPDSDTLSELCR-GLWLSGKEE 443



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 94/196 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A K+F ++    + P+ ITYNT+I GY  +   +   +L +++    +K + +T+  
Sbjct: 267 LHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNA 326

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C EGR   A  +  ++  +    N  T+S LI G    +N + AF +Y+ M  + 
Sbjct: 327 LILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSG 386

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  ++ +LI   CK    + A+       +  + PD  T + L RG   +G+   A+
Sbjct: 387 CHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELAL 446

Query: 188 QLYDSMLRNGIMPDGL 203
           +L   M    +MP+G 
Sbjct: 447 KLCKEMEMKHLMPEGF 462



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E     A  L  +L    L P+  T++ +I G C     + A QL++ +      PN  T
Sbjct: 334 EGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHT 393

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F +LI  FCK    D A  +  +M E+    +  T S L  G + S   + A  + +EM 
Sbjct: 394 FKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEME 453

Query: 125 ENNISP 130
             ++ P
Sbjct: 454 MKHLMP 459


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 112/193 (58%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL L  ++ ++GLE DI  Y  +I G C++++LDEA  L  K+    L+PN I +T +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DA  K G++ +A  M  K+L+ G + NV+TY  LIDG  K+ ++  A   + +M +  +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+ +Y+ L+DGLCK G + EA+  F+  +   +  D V Y  L+ GY K G   +A  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 189 LYDSMLRNGIMPD 201
           L   M+ +G+  D
Sbjct: 595 LKAKMIDSGLQLD 607



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 120/219 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  LF ++ + G  PD++T+N++I GY     LDE  QL E++     K +
Sbjct: 198 LCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKAD 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK GRM+ A   F+ M  +G  ANVVT+S  +D + K   ++ A  ++ 
Sbjct: 258 VVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFA 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++ N  +Y+ LIDG CK G +++A+      +   +  +VVTY +L+ G CK  
Sbjct: 318 QMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA  +   M + G+  + LL +TL   +  +  S++
Sbjct: 378 KVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 2/197 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A+ +  ++ D G +P++ITY  +I G C    +DEA+  F K+  + L PN  
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L+D  CK G +++A  +F++M+ KG   + V Y+ L+DGY K  N+  AF +  +M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ +  ++  Y+  I G C   +M EA   F   + + + PD   Y  LI  Y K G  
Sbjct: 600 IDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659

Query: 184 TEAMQLYDSMLRNGIMP 200
            EA+ L D M R  ++P
Sbjct: 660 EEAISLQDEMER--VLP 674



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  L  ++ + GLEP+ I Y T++       ++ EA+ + +K+     +PN IT+  
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D+A   F+KM + G   NV  Y+ L+DG  K+  +  A  ++ EM    
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +S + V Y+ L+DG  K+G + +A       +D+ L  D+  Y   I G+C      EA 
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 188 QLYDSMLRNGIMPD 201
           +++  M+ +GI PD
Sbjct: 629 EVFSEMIGHGIAPD 642



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KLF Q+  RG+  +  TY  +I G C   RLD+A+ L +++    +  N +
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+L+D  CKE ++ +A  +   M + G +AN + Y+ LI G+F ++N + A  +  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 124 -------------------C----------------ENNISPNIVSYSILIDGLCKRGLM 148
                              C                E+ + PN + Y+ ++D   K G +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+      LD+   P+V+TY  LI G CKAG   EA+  ++ M   G+ P+    + L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 209 AD 210
            D
Sbjct: 545 VD 546



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 108/214 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A   F  +   G+  +++T++T +  +C    + EA++LF ++    +  N  T+T
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYT 332

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK GR+DDA ++  +M+ +G   NVVTY+ L+DG  K + +  A DV   M + 
Sbjct: 333 CLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N + Y+ LI G       E+AL       +  L  D+  Y  LI+G C   +  EA
Sbjct: 393 GVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             L   M  +G+ P+ ++ +T+ D   +S    E
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 35/246 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ L  ++  +G+  +++TY  ++ G C   ++ EA  +   +    ++ N +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 64  TFTILI-----------------------------------DAFCKEGRMDDATMMFSKM 88
            +T LI                                      C   ++D+A  + +KM
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E G + N + Y+ ++D  FKS  +  A  + +++ ++   PN+++Y  LIDGLCK G +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA+  F+   D  L P+V  Y  L+ G CK G   EA+QL++ M+  G+  D ++ + L
Sbjct: 520 DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTAL 579

Query: 209 ADYNLQ 214
            D  L+
Sbjct: 580 LDGYLK 585



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 4/191 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++   ++ +  + P+  T N I+             +LFE+L      PN  TF I
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CKEG + +A  +FS+M E G   +VVT++ LIDGY K   +     + EEM  + 
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ LI+  CK G ME A   F       ++ +VVT++  +  +CK G   EAM
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 188 QLYDSMLRNGI 198
           +L+  M   G+
Sbjct: 314 KLFAQMRVRGM 324



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 85/151 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F ++ D GL+P++  Y  ++ G C    L+EAVQLF ++    +  +
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T L+D + K+G + DA  + +KM++ G + ++  Y+C I G+     M  A +V+ 
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 632

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + I+P+   Y+ LI    K G +EEA+
Sbjct: 633 EMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 109/191 (57%), Gaps = 2/191 (1%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++   L  RG   +   Y+++I G C   + ++A++L++++      PN+I ++ LID  
Sbjct: 331 RVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGL 390

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C+EG++D+A    S+M  KG   N  TYS L+ GYF++ +   A  V++EM  NN   N 
Sbjct: 391 CREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNE 450

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V YSILI+GLCK G   EAL  +   L   +  DVV Y+ +I G+C A    + ++L++ 
Sbjct: 451 VCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQ 510

Query: 193 MLRNG--IMPD 201
           ML  G  + PD
Sbjct: 511 MLCQGPVVQPD 521



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A KL   +  +G  P+ +TYN ++ G C   +L++AV L  ++   +  PN
Sbjct: 250 LCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPN 309

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+ F  +GR  D T +   +  +G + N   YS LI G  K      A ++++
Sbjct: 310 DVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWK 369

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      PN + YS LIDGLC+ G ++EA        +   LP+  TY+ L+RGY +AG
Sbjct: 370 EMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAG 429

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A+ ++  M  N  + + +  S L +
Sbjct: 430 DSHKAILVWKEMANNNCIHNEVCYSILIN 458



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 101/203 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++F ++  R   PD  TY+T++ G C   R+DEAV L +++      PN + F +
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI A CK+G +  A  +   M  KG   N VTY+ L+ G      ++ A  +  +M  N 
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN V++  LI+G   +G   +               +   Y+ LI G CK G+  +AM
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L+  M+  G  P+ ++ S L D
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALID 388



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 98/176 (55%), Gaps = 2/176 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD A     ++ ++G  P+  TY++++ GY       +A+ +++++       N
Sbjct: 390 LCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHN 449

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ILI+  CK+G+  +A M++ +ML +G K +VV YS +I G+  +  ++    ++ 
Sbjct: 450 EVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFN 509

Query: 122 EM-CENNI-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           +M C+  +  P++++Y+IL++  C +  +  A+   +  LD    PD +T  I ++
Sbjct: 510 QMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLK 565



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 20/190 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LK 59
           L K+     AL ++ Q+  RG++ D++ Y+++I G+C+ N +++ ++LF ++ C    ++
Sbjct: 460 LCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQ 519

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS--QNMKSAF 117
           P+ IT+ IL++AFC +  +  A  + + ML++G   + +T     D + K+  +NM    
Sbjct: 520 PDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT----CDIFLKTLRENMNPPQ 575

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           D  E + E            L+  L KR     A       +   LLP   T+A++++  
Sbjct: 576 DGREFLDE------------LVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQV 623

Query: 178 CKAGRPTEAM 187
           CK     +A+
Sbjct: 624 CKPKNVRKAI 633


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  ++AA  L   L  +GL PD+ T+NT+I G C     D A+++FE++     KP+
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ILID+ C E R+ +A M+  +M   G   N V Y+ LIDG  KS+ ++ A ++++
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +S + V+Y+ LIDGLCK   +EEA       +   L PD  TY  L+  +C+ G
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  +  +M  NG  PD     TL
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTL 549



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 113/204 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ AL +   + ++G +PD+ TYN++I G C L   ++A+++ +++   +  PN++T+ 
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 337

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI A CKE  ++ AT +   ++ KG   +V T++ LI G   S+N   A +++EEM   
Sbjct: 338 TLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+  +YSILID LC    ++EAL        +    + V Y  LI G CK+ R  +A
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++D M   G+    +  +TL D
Sbjct: 458 EEIFDQMELLGVSRSSVTYNTLID 481



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+E  L+ ALK+  Q+   G     ++   ++ G+C   R++EA++   +++     P+
Sbjct: 203 FIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPD 262

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  L++ FC+ G ++DA  +   M+EKG   +V TY+ LI G  K    + A ++ +
Sbjct: 263 QVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ 322

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M     SPN V+Y+ LI  LCK   +E A       +   LLPDV T+  LI+G C + 
Sbjct: 323 QMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSK 382

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               AM++++ M   G  PD    S L D
Sbjct: 383 NQDIAMEMFEEMKNKGCKPDEFTYSILID 411



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A+ +  ++ + GL+PD IT+ T++ G+     L+ A+++ +++        
Sbjct: 168 LCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLT 227

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +++  +L++ FCKEGR+++A     ++ E+G   + VT++ L++G+ +  N+  A D+ +
Sbjct: 228 NVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVD 287

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P++ +Y+ LI G+CK G  E+A+      +     P+ VTY  LI   CK  
Sbjct: 288 FMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN 347

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  L   ++  G++PD    +TL
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTL 374



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 36/233 (15%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  L  AL L  ++   G   + + YNT+I G C   R+++A ++F+++  + +  +S+T
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LID  CK  R+++A+ +  +M+ +G K +  TY+ L+  + +  +++ A D+ + M 
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535

Query: 125 ENNISPNIVSYSILIDGLCKRGLME----------------------------------- 149
            N   P+I +Y  LI GLC+ G ++                                   
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
           E +  F   ++    PD +T+ I+ RG C  G P  EA+     ML  GI+P+
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPE 648



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 87/180 (48%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G +PD   YN  +      N+L     L  K+    +  +  TF +LI A CK  ++  A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            +M  +M   G K + +T++ L+ G+ +  ++  A  + ++M         VS  +L++G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +EEAL       +    PD VT+  L+ G+C+ G   +A+ + D M+  G  PD
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   GL+PD  TYN+++  +C +  +++A  + + +     +P+
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C+ GR+D A+ +   +  KG       Y+ +I   F  +  K    ++ 
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 602

Query: 122 EMCENNISPNIVSYSILIDGLCKRG-LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E +  P+ +++ I+  GLC  G  ++EA+      L+  +LP+  ++  L  G C  
Sbjct: 603 EMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSL 662

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
                 ++L + ++    M +
Sbjct: 663 SMEDTLIELINMVMEKAQMSE 683



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 2/166 (1%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           T++      +  D    L ++L      PN+ TF  LI +F     +++   +    L  
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGF 119

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            P  N   Y+  ++   +   +K    ++ +M    I  ++ ++++LI  LCK   +  A
Sbjct: 120 KPDTNF--YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +       ++ L PD +T+  L++G+ + G    A+++   ML  G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 223


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   +   G +  ++TY T+I G C    LD A  L +K+      PN +T+T LID
Sbjct: 29  ALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALID 88

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE-MCENNIS 129
             CK  R  DA     +ML  G + ++VTY+ LI G   +  M  A  V +E M E+   
Sbjct: 89  GLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRI 148

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+Y+  I GLCK G +++ L          + PDVVT+  +I G CKA R  +A Q+
Sbjct: 149 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQV 208

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  ML  G +PD L  S + D
Sbjct: 209 FKGMLERGCVPDSLTYSIMLD 229



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 108/197 (54%), Gaps = 1/197 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LDAA  L  ++ D G  P+++TY  +I G C   R  +A+Q  +++     +P+
Sbjct: 55  LCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSK-MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+  LI   C   RMDDA ++  + M+E G   +VVTY+  I G  K+  +    ++ 
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML 174

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM    ISP++V++  +I GLCK   +++A   F   L+   +PD +TY+I++    +A
Sbjct: 175 EEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRA 234

Query: 181 GRPTEAMQLYDSMLRNG 197
            R     ++ + M+++G
Sbjct: 235 NRLDTVEEVLEHMVKSG 251



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 1/185 (0%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +  R    D   YNT+I G C   +   A++L   +       + +T+T LID  CK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +D A  +  KM + G   NVVTY+ LIDG  K++    A    + M  +   P++V+Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 138 LIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           LI GLC    M++A L      +++  +PDVVTY   I G CKAG+  + +++ + M R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 197 GIMPD 201
           GI PD
Sbjct: 181 GISPD 185



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 37/246 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD  L++  ++   G+ PD++T+ +II G C  NR+D+A Q+F+ +      P+
Sbjct: 161 LCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPD 220

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T++I++D   +  R+D    +   M++ G  A   TY+ LI    ++ +++SA   YE
Sbjct: 221 SLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYE 280

Query: 122 E-----------------------------------MCENNISPNIVSYSILIDGLCKRG 146
           +                                   M E+   PN++SY+ +IDGLCK G
Sbjct: 281 QAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSG 340

Query: 147 LMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTEAMQLYDSM-LRNGIMPDGLL 204
            +++A       LD+    PDV+ +  LI G+CKAGR ++A QL   M  +N  +PD + 
Sbjct: 341 NVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVT 400

Query: 205 LSTLAD 210
            +T+ D
Sbjct: 401 YNTMID 406



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 105/193 (54%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA L L   + + G  PD++TYNT I G C   +LD+ +++ E++    + P+ +TF  +
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK  R+DDA  +F  MLE+G   + +TYS ++D   ++  + +  +V E M ++  
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
                +Y+ LI  L + G +E A +A+  A++   + +V T+   I   C++G+   A  
Sbjct: 253 YALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKN 312

Query: 189 LYDSMLRNGIMPD 201
           +   M+ +G +P+
Sbjct: 313 ILLGMIESGSLPN 325



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-K 59
           L K  ++D A KL  ++ D G  +PD+I +NT+I G+C   RL +A QL +++    +  
Sbjct: 336 LCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICV 395

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           P+ +T+  +ID   K G +  A ++  +M   G
Sbjct: 396 PDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 43.1 bits (100), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 33/76 (43%)

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y+ LI GLCK      AL   H    N     VVTY  LI G CK+G    A  L   M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 195 RNGIMPDGLLLSTLAD 210
             G  P+ +  + L D
Sbjct: 73  DAGCAPNVVTYTALID 88


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 39/246 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L+    +D+A ++F  +    ++PDI+TYNT+I GYC   +  +A++    +        
Sbjct: 214 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 273

Query: 54  ------------------TCV-----------QLKPNSITFTILIDAFCKEGRMDDATMM 84
                             +CV           Q+ P++  F+++I   CKEG++++   +
Sbjct: 274 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTV 331

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+ KG K NV  Y+ LIDGY KS +++ A  +   M +    P++V+YS++++GLCK
Sbjct: 332 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 391

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +EEAL  FH    + L  + + Y+ LI G  KAGR  EA +L++ M   G   D   
Sbjct: 392 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 451

Query: 205 LSTLAD 210
            + L D
Sbjct: 452 YNALID 457



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L ++ ++ + G+EP + TYN ++ G  S   +D A ++FE +   ++KP+ +T+  +I  
Sbjct: 189 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 248

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +CK G+   A      M  +G +A+ +TY  +I   +   +  S   +Y+EM E  I   
Sbjct: 249 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 308

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             ++S++I GLCK G + E    F   +     P+V  Y +LI GY K+G   +A++L  
Sbjct: 309 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 368

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M+  G  PD +  S + +
Sbjct: 369 RMIDEGFKPDVVTYSVVVN 387



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 1/200 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A++L  ++ D G +PD++TY+ ++ G C   R++EA+  F       L  NS+
Sbjct: 356 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 415

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID   K GR+D+A  +F +M EKG   +   Y+ LID + K + +  A  +++ M
Sbjct: 416 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 475

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E      + +Y+IL+ G+ K    EEAL  +   +D  + P    +  L  G C +G+
Sbjct: 476 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 535

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
              A ++ D +   G++ D 
Sbjct: 536 VARACKILDELAPMGVILDA 555



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+    +F  +  +G +P++  Y  +I GY     +++A++L  ++     KP+
Sbjct: 319 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 378

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++++++  CK GR+++A   F      G   N + YS LIDG  K+  +  A  ++E
Sbjct: 379 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 438

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV-TYAILIRGYCKA 180
           EM E   + +   Y+ LID   K   ++EA+  F    +       V TY IL+ G  K 
Sbjct: 439 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 498

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            R  EA++L+D M+  GI P       L+
Sbjct: 499 HRNEEALKLWDMMIDKGITPTAACFRALS 527



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
            V   + LI  + K   ++    V+ +M EN I P + +Y+ L++GL     ++ A   F
Sbjct: 168 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 227

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                  + PD+VTY  +I+GYCKAG+  +AM+    M   G   D +   T+
Sbjct: 228 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 280


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 105/189 (55%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EP+++ YN +I GYC++  L+ AV +FE++      PN  T+T LI  FCK  ++D A
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            M+FS+M++ G   NVVTY+ LI G      +  A+ + + M  + + PN  + S+LID 
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK   + EA       +   +  + + Y  LI G CKAGR   A +L  +++  G +PD
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386

Query: 202 GLLLSTLAD 210
               S+L D
Sbjct: 387 AHTYSSLID 395



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 108/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ LF ++ D GL P+++TY  +I G CS  +LD A +L + +    L PN  
Sbjct: 259 KSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEW 318

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T ++LIDA CK  R+ +A ++   +++KG K N + Y+ LIDG  K+    +A  + + +
Sbjct: 319 TCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+  +YS LIDGLC++  + EA+      ++  + P  VTY I+I    +    
Sbjct: 379 VSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA 438

Query: 184 TEAMQLYDSMLRNGIMPD 201
             + ++ D M+  GI PD
Sbjct: 439 DGSKKILDKMIAAGIKPD 456



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A +LF  +  RG      TY  ++ G C    + EA+ +F  +      P+   +  
Sbjct: 123 LAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYAT 182

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C  GR  +A  + S  + +G + NVV Y+ LIDGY    +++ A DV+E M  N 
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SPN+ +Y+ LI G CK   ++ A+  F   +D  L+P+VVTY  LI+G C  G+   A 
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L  SM  +G++P+    S L D
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLID 325



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 103/200 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  L G L  +G++ + I Y ++I G C   R   A +L + L      P+
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++ LID  C++  + +A ++   M+EKG + + VTY+ +ID   +      +  + +
Sbjct: 387 AHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILD 446

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I P++ +Y+I +   C  G ME+A +     +D+ + P++VTY  LI GY   G
Sbjct: 447 KMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLG 506

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             ++A   +  M+ NG  P+
Sbjct: 507 LTSQAFSTFKHMVANGCKPN 526



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 101/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F  +   G  PD   Y T++ G C   R  EA  L         +PN + +  LID
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G ++ A  +F +M   G   NV TY+ LI G+ KS+ +  A  ++  M +  + P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI G C  G ++ A        ++ L+P+  T ++LI   CK  R  EA  L 
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
            S+++ GI  + ++ ++L D
Sbjct: 341 GSLIQKGIKVNEIVYTSLID 360



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K     AA +L   L  +G  PD  TY+++I G C    L EA+ + + +    ++P+
Sbjct: 362 LCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TI+ID   +E   D +  +  KM+  G K +V TY+  +  Y     M+ A  +  
Sbjct: 422 PVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMML 481

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
            M ++ + PN+V+Y+ LI G    GL  +A   F   + N   P+  +Y +L+R
Sbjct: 482 HMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 92/201 (45%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L A+ +    L   G  PD   Y + + GYC    L  A +LF  +        + T+T 
Sbjct: 88  LPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTA 147

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  G + +A  +F+ M   G   +   Y+ ++ G   +   + A  +  +     
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ LIDG C  G +E A+  F     N   P+V TY  LI G+CK+ +   AM
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M+  G++P+ +  + L
Sbjct: 268 MLFSRMVDAGLVPNVVTYTAL 288



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 51/250 (20%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+ +   + ++G++P  +TY  II         D + ++ +K+    +KP+
Sbjct: 397 LCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TI + ++C EGRM+DA  M   M++ G   N+VTY+ LI GY        AF  ++
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----------------------GLMEEALY----- 153
            M  N   PN  SY++L+  L K+                       GL+EE +      
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPS 576

Query: 154 ---AFHCALDN--------------------HLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
               ++C L +                    +L P    Y  +I   C+    TEA+   
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636

Query: 191 DSMLRNGIMP 200
           DSM+++G +P
Sbjct: 637 DSMVKSGYIP 646



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 80/176 (45%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           ++ TY T+I  YC    L  + +    L      P+S  +T  +  +C+ G +  A  +F
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M  +G      TY+ L+ G   +  ++ A  V+  M  +  +P+   Y+ ++ GLC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           G   EA      A+     P+VV Y  LI GYC  G    A+ +++ M  NG  P+
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPN 246



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T LI+A+C  G +  +    S +L  G   +   Y+  + GY ++  +  A  ++
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M          +Y+ L+ GLC  G++ EA+  F     +   PD   YA ++ G C A
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  EA  L    +  G  P+ ++ + L D
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALID 220



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 97/267 (36%), Gaps = 51/267 (19%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  ++ A  +   + D G+ P+++TYN +ICGY +L    +A   F+ +     KPN  +
Sbjct: 470 EGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEES 529

Query: 65  FTILI---------------------------------------------------DAFC 73
           +T+L+                                                    + C
Sbjct: 530 YTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC 589

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +  R+D+A ++  +M       +   Y+ +I    + + +  A    + M ++   P + 
Sbjct: 590 RVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLE 649

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           SY  +I  LC+ G ++ A   F   L      + + + ILI G  + G   E   L   M
Sbjct: 650 SYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM 709

Query: 194 LRNGIMPDGLLLSTLADYNLQSSGSQE 220
                 P   L + L      ++  QE
Sbjct: 710 EEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 4/138 (2%)

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  +   + D     S+M    P  N+ TY+ LI+ Y  + ++ ++      +     +P
Sbjct: 50  ALARHRMLADMESFASRM----PARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAP 105

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+  + G C+ GL+  A   F        +    TY  L+ G C AG   EAM ++
Sbjct: 106 DSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVF 165

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M  +G  PD  + +T+
Sbjct: 166 AGMQADGCAPDPHVYATM 183


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 123/233 (52%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  + + GL PD  +Y T++ GYC +  +  A++   K+    ++P+  T+T+LID
Sbjct: 342 AAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLID 401

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + CK G M+ A  +F +M+ +G   +VV+Y+ L++GY K  +++ AF++   M    +SP
Sbjct: 402 SCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSP 461

Query: 131 NIVSYSILIDGLCKRGLM-----------------------------------EEALYAF 155
           ++V+Y+ILI GL KRGL+                                   EEA   F
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLF 521

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               ++HL PDVVT + L+ GYC+     EA  L+  ML  G+  D +L ++L
Sbjct: 522 FYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSL 574



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 112/200 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A  LF ++   GL PD+++YNT++ GY     L +A +L   +    + P+ +
Sbjct: 405 KPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLV 464

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI    K G +++A  +  ++  +G   +VVT++ +I G+    N + AF ++  M
Sbjct: 465 TYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYM 524

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E+++ P++V+ S L++G C+   M EA   FH  LD  L  DV+ Y  LI G+C  G  
Sbjct: 525 SEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNI 584

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
            +A  L   M+ +GIMP+ +
Sbjct: 585 DDACHLVSMMIEHGIMPNNI 604



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 38/243 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------------ 54
           ++D   KL  ++   G++PD++ Y  +I   C ++ L EA  +  K+T            
Sbjct: 236 NIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVS 295

Query: 55  --------------------CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK 94
                                  L PN   F   I   C +G M  A  +F  M E G  
Sbjct: 296 SVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLI 355

Query: 95  ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            +  +Y+ ++ GY K +++ +A     +M +  I P++ +Y++LID  CK G ME A Y 
Sbjct: 356 PDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYL 415

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           F   +   L+PDVV+Y  L+ GY K G   +A +L   M   G+ PD      L  YN+ 
Sbjct: 416 FQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPD------LVTYNIL 469

Query: 215 SSG 217
             G
Sbjct: 470 IHG 472



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 98/179 (54%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+I  +N+ I   C+   + +A ++F+ +  + L P+  ++T ++  +CK   + +A 
Sbjct: 319 LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNAL 378

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
               KML++G + +V TY+ LID   K  NM+ A  +++ M    + P++VSY+ L++G 
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            K+G +++A           + PD+VTY ILI G  K G   EA  + D + R G  PD
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPD 497



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 111/202 (54%), Gaps = 4/202 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ HL  A +L   +   G+ PD++TYN +I G      ++EA  + ++LT     P+ +
Sbjct: 440 KKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVV 499

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT +I  F  +G  ++A ++F  M E   + +VVT S L++GY +++ M  A  ++ +M
Sbjct: 500 TFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKM 559

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK--AG 181
            +  +  +++ Y+ LI G C  G +++A +     +++ ++P+ +T+  L+ GY K    
Sbjct: 560 LDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVE 619

Query: 182 RPTE--AMQLYDSMLRNGIMPD 201
            P E  A +L   +L+ GI  +
Sbjct: 620 NPVERAAFKLQQLLLKYGIQAE 641



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+ A     ++  +GL  +    +  I GYCS   +D   +L  ++  + +KP+
Sbjct: 196 LLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPD 255

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +TI+ID+ CK   + +AT +  KM + G   + V+ S ++DGY K    + A DV E
Sbjct: 256 VVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE 315

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                N+SPNI  ++  I  LC  G M +A   F    +  L+PD  +Y  ++ GYCK  
Sbjct: 316 VF---NLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVK 372

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             + A++    ML+ GI P     + L D
Sbjct: 373 DISNALKYLGKMLKRGIRPSVATYTLLID 401



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 83/144 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK   ++ A  +  +LT RG  PD++T+  II G+ +    +EA  LF  ++   L+P+
Sbjct: 473 LIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPD 532

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + L++ +C+   M +A ++F KML+ G KA+V+ Y+ LI G+    N+  A  +  
Sbjct: 533 VVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVS 592

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
            M E+ I PN +++  L+ G  K+
Sbjct: 593 MMIEHGIMPNNITHHALVLGYEKK 616



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 3/206 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE     ALKL  ++    + P I   N+++       +L+ A    +++    L  N+
Sbjct: 162 VKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNA 221

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
              ++ I  +C +G +D    +  +M   G K +VV Y+ +ID   K   +K A  +  +
Sbjct: 222 SIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFK 281

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +  +  + VS S ++DG CK G  EEA+         +L P++  +   I   C  G 
Sbjct: 282 MTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGN 338

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +A +++  M   G++PD    +T+
Sbjct: 339 MLKAAKVFQDMCEMGLIPDCFSYTTM 364



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 76/163 (46%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            Y  ++  Y   N    A++L  K+  + + P       L+ A  +  +++ A     +M
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G   N    S  I GY    N+ + + +  EM    I P++V+Y+I+ID LCK  L+
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +EA           +  D V+ + ++ GYCK G+  EAM + +
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE 315



 Score = 43.1 bits (100), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 56/138 (40%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + +L++ + KE     A  +  KM        +   + L+    +S+ +  A+D  +EM
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N    S+ I G C +G ++             + PDVV Y I+I   CK    
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  +   M + G+  D
Sbjct: 273 KEATSILFKMTQMGVFLD 290


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 125/224 (55%), Gaps = 6/224 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+ +F Q+ +RG+ PD  TY T+I  +  + RL +A+  F ++  + LKP++I
Sbjct: 414 KRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTI 473

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            +  LI  FC  G +  A  + S+M+ +G P+ N V ++ +I+   K   +  A D+++ 
Sbjct: 474 VYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDL 533

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +      P++++++ LIDG    G ME+A       +   + PDVVTY+ L+ GYC+ GR
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGR 593

Query: 183 PTEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQEHC 222
             + + L+  ML  G+ P     G++L  L + + ++ G+++ C
Sbjct: 594 IDDGLILFREMLSKGVKPTTITYGIILHGLFN-DGRTVGAKKMC 636



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 5/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITF 65
            L  A+  F Q+   GL+PD I YN++I G+C    L +A +L  ++    + +PN++ F
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFF 511

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +I++ CKEGR+ +A  +F  ++  G + +V+T++ LIDGY     M+ AF V + M  
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMIS 571

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I P++V+YS L+DG C+ G +++ L  F   L   + P  +TY I++ G    GR   
Sbjct: 572 VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 186 AMQLYDSMLRNGIMPD----GLLLSTLADYN 212
           A ++   M+ +G   D    G++L  L   N
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNN 662



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 108/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+   G EPD +TYN +I GY  L +  E   +F ++T   L P+
Sbjct: 272 LCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPD 331

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T    + + CK G+  +A   F  M  KG K ++VTYS L+ GY     +    +++ 
Sbjct: 332 IFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFN 391

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I  +   Y+ILID   KRG+M+EA+  F    +  ++PD  TY  +I  + + G
Sbjct: 392 SMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ PD ++ ++L
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSL 478



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 3/194 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTILI 69
              LFG+    GL+ D+I  N ++   C   R D+AV  L  ++  + ++P++I+++ ++
Sbjct: 138 GFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVL 197

Query: 70  DAFCKEGRMDDATMMFSKMLEK--GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            + C++ R   A  +   M++K  G   NVV+Y+ +I G+F+   +  A +++ EM +  
Sbjct: 198 KSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQG 257

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+YS  ID LCK   M++A       + N   PD VTY  +I GY   G+  E  
Sbjct: 258 VVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETA 317

Query: 188 QLYDSMLRNGIMPD 201
            ++  M R G+MPD
Sbjct: 318 GMFREMTRRGLMPD 331



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 101/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P++++YNT+I G+     + +A  LF ++    + P+ +T++  IDA CK   MD A
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            ++  +M+  G + + VTY+C+I GY      K    ++ EM    + P+I + +  +  
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK G  +EA   F         PD+VTY++L+ GY   G   + + L++SM  NGI+ D
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401

Query: 202 GLLLSTLAD 210
             + + L D
Sbjct: 402 HSVYNILID 410



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A  +F  +   G  PD+IT+N++I GY  + ++++A  + + +  V ++P+
Sbjct: 518 LCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPD 577

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+D +C+ GR+DD  ++F +ML KG K   +TY  ++ G F       A  +  
Sbjct: 578 VVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCH 637

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +  I++ GLC+    +EA+  F      ++  ++     +I    K  
Sbjct: 638 EMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVR 697

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA +L+DS+   G++P+      +   NL   GS E
Sbjct: 698 KREEANELFDSISATGLVPNASTYGVMIT-NLLKEGSVE 735



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 1/196 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F ++T RGL PDI T N+ +   C   +  EA + F+ +     KP+ +T+++L+  + 
Sbjct: 319 MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYA 378

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            EG + D   +F+ M   G  A+   Y+ LID Y K   M  A  ++ +M E  + P+  
Sbjct: 379 AEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAW 438

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y  +I    + G + +A+  F+  +   L PD + Y  LI+G+C  G   +A +L   M
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 194 LRNGI-MPDGLLLSTL 208
           +  GI  P+ +  +++
Sbjct: 499 MSRGIPRPNTVFFNSI 514



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 6   CHL----DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLK 59
           CH     DA   L  ++ + G+EPD I+Y+T++   C  +R   A+ L   +        
Sbjct: 165 CHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCS 224

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN +++  +I  F +EG +  A  +F +M+++G   +VVTYS  ID   K++ M  A  V
Sbjct: 225 PNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELV 284

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
             +M  N   P+ V+Y+ +I G    G  +E    F       L+PD+ T    +   CK
Sbjct: 285 LRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCK 344

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+  EA + +DSM   G  PD +  S L
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPDLVTYSVL 373



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A + F  +  +G +PD++TY+ ++ GY +   + + + LF  +    +  +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              + ILIDA+ K G MD+A ++F++M E+G   +  TY  +I  + +   +  A D + 
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL-LPDVVTYAILIRGYCKA 180
           +M    + P+ + Y+ LI G C  G + +A       +   +  P+ V +  +I   CK 
Sbjct: 462 QMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKE 521

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR  EA  ++D ++  G  PD +  ++L D
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLID 551



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 101/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +   +   G+EPD++TY+ ++ GYC   R+D+ + LF ++    +KP +IT+ I
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++     +GR   A  M  +M+E G   ++ T   ++ G  ++     A  +++++   N
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  NI   + +ID + K    EEA   F       L+P+  TY ++I    K G   EA 
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++  M ++G  P   LL+ +
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNI 759



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)

Query: 7   HLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           +L  A +L  ++  RG+  P+ + +N+II   C   R+ EA  +F+ +  +  +P+ ITF
Sbjct: 487 NLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITF 546

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             LID +   G+M+ A  +   M+  G + +VVTYS L+DGY ++  +     ++ EM  
Sbjct: 547 NSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLS 606

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P  ++Y I++ GL   G    A    H  +++    D+ T  I++ G C+     E
Sbjct: 607 KGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDE 666

Query: 186 AMQLYDSM 193
           A+ L+  +
Sbjct: 667 AIALFKKL 674



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 70/142 (49%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A K+  ++ + G   DI T   I+ G C  N  DEA+ LF+KL  + +K N      +I
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMI 690

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           DA  K  + ++A  +F  +   G   N  TY  +I    K  +++ A +++  M ++  +
Sbjct: 691 DAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCA 750

Query: 130 PNIVSYSILIDGLCKRGLMEEA 151
           P+    + +I  L ++G + +A
Sbjct: 751 PSSRLLNNIIRVLLEKGEISKA 772



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 52/201 (25%)

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML--EKGPKA---NVVTYSCLID-- 105
           LT +   P+S T        C++G    A  +F+++   E  P+     V TY+ L+D  
Sbjct: 79  LTALARAPSSAT--------CRDGP-SLAVALFNRICREEARPRVALPTVCTYNILMDCC 129

Query: 106 -------------GYFKSQNMKS--------------------AFDV-YEEMCENNISPN 131
                        G F    +K+                    A +V    M E  + P+
Sbjct: 130 CRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPD 189

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNH--LLPDVVTYAILIRGYCKAGRPTEAMQL 189
            +SYS ++  LC+    + AL   H  +       P+VV+Y  +I G+ + G  ++A  L
Sbjct: 190 TISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNL 249

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M++ G++PD +  S+  D
Sbjct: 250 FHEMMQQGVVPDVVTYSSYID 270


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 110/197 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  +F ++ ++G+EPD++TY+T+I   C + ++D+AV+ F ++    + P+  T+  
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  +  +M+ KG + ++  ++ +I+   K   +  A ++++      
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN++ Y+ L+DG C  G ME AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 188 QLYDSMLRNGIMPDGLL 204
            L+  +L  GI P   L
Sbjct: 587 SLFREILHKGIKPSTTL 603



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+ D+G+ PD  TYN++I GY S  +  EAV++ +K+T   + P+
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY----------SCLID------ 105
            +T   L+ + CK G++ DA  +F  M  KG K ++ +Y           CL+D      
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380

Query: 106 -------------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                               Y K   +  A  ++ EM E  + P++V+YS +I  LC+ G
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIG 440

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            M++A+  F+  +D  + P + TY  LI+G+C  G   +A  L   M+  G+ PD
Sbjct: 441 KMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 110/213 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ P I TY+ +I G+C+   L +A  L  ++    ++P+   F  
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNF 501

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G   NV+ Y+ L+DGY     M++A  V++ M    
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG 561

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+V Y  L++G CK G ++E L  F   L   + P    Y I++ G  +AGR   A 
Sbjct: 562 IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +  M  +GI  D    S +     ++S S E
Sbjct: 622 VKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDE 654



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 114/207 (55%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D   +LF  +   G+ PD   +N +I  Y     LD A  +F ++    ++P+ +
Sbjct: 369 KGCLVDLT-ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ +I A C+ G+MDDA   F++M+++G   ++ TY  LI G+    ++  A D+  +M
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM 487

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I  ++ +I+ LCK G + +A   F   +   L P+V+ Y  L+ GYC  G+ 
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A++++D M+  GI P+ ++  TL +
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVN 574



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 105/179 (58%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           GL P+++ YNT++ GYC + +++ A+++F+ +    ++PN + +  L++ +CK GR+D+ 
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F ++L KG K +   Y+ ++ G F++     A   + EM E+ I+ +  +YSI++ G
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           L K    +EA+  F      ++  D+ T  I+I G  +  R  EA  L+ S+ R+G++P
Sbjct: 646 LFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVP 704



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 3/200 (1%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTILID 70
           L  FGQ+   GL  D I  + ++ G C   R  EA+  L  ++  +   P+  ++ I++ 
Sbjct: 128 LAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLK 187

Query: 71  AFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + C + +   A  +   M E G     N V Y+ +IDG+FK  ++  A D++ EM +  I
Sbjct: 188 SLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGI 247

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP++ +Y+ +++ LCK   M++A       +D  +LPD  TY  LI GY   G+  EA++
Sbjct: 248 SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +   M   GI+PD + L++L
Sbjct: 308 VSKKMTSQGILPDVVTLNSL 327



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +F  +  +G + DI +Y  ++ GY +   L +  +LF  +    + P+
Sbjct: 331 LCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPD 390

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S  F +LI A+ K G +D AT++F++M E+G + +VVTYS +I    +   M  A + + 
Sbjct: 391 SHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFN 450

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++P+I +Y  LI G C  G + +A       ++  + PD+  +  +I   CK G
Sbjct: 451 QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R  +A  ++D  +  G+ P+ ++ +TL D
Sbjct: 511 RVMDAQNIFDFTISIGLHPNVMVYNTLMD 539



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 1/200 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G++P+++ Y T++ GYC + R+DE + LF ++    +KP++  + I
Sbjct: 547 MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNI 606

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    + GR   A + F +M E G   +  TYS ++ G FK+     A  +++E+   N
Sbjct: 607 ILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I + +I+I G+ +   +EEA   F     + L+P VVTY+I++    K G   EA 
Sbjct: 667 VKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEAD 726

Query: 188 QLYDSMLRNGI-MPDGLLLS 206
            ++ SM   G   P+  LL+
Sbjct: 727 DMFSSMENAGCEQPNSQLLN 746



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 93/177 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           Q+ ++G+ PDI  +N II   C L R+ +A  +F+    + L PN + +  L+D +C  G
Sbjct: 486 QMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVG 545

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           +M++A  +F  M+  G + NVV Y  L++GY K   +     ++ E+    I P+   Y+
Sbjct: 546 KMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYN 605

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           I++ GL + G    A   FH   ++ +  D  TY+I++ G  K     EA+ L+  +
Sbjct: 606 IILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKEL 662



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 97/184 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ + YNT+I G+     +++A  LF ++    + P+  T+  +++A CK   MD A  +
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M++KG   +  TY+ LI GY  +   K A  V ++M    I P++V+ + L+  LCK
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +++A   F          D+ +Y I++ GY   G   +  +L++ ML +GI PD  +
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393

Query: 205 LSTL 208
            + L
Sbjct: 394 FNVL 397



 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 5/152 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ DI T N +I G   + R++EA  LF  ++   L P+
Sbjct: 646 LFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPS 705

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG---PKANVVTYSCLIDGYFKSQNMKSAFD 118
            +T++I++    KEG +++A  MFS M   G   P + ++ +  ++    + + +  A  
Sbjct: 706 VVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNH--VVRELLEKREIVRAGT 763

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
              ++ E + S +  + ++LID    +G   E
Sbjct: 764 YLSKIDERSFSLDHSTTTLLIDLFSSKGTCRE 795



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 9/164 (5%)

Query: 46  AVQLFEKLTCVQ----LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           AV LF +++       L P   T+ IL+D   +  R       F ++L+ G   + +  S
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 102 CLIDGYFKSQNMKSAFDVY-EEMCENNISPNIVSYSILIDGLC---KRGLMEEALYAFHC 157
            L+ G  +++    A D+    M      P++ SY I++  LC   K G  +E L     
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE-LLRMMA 206

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                 LP+ V Y  +I G+ K G   +A  L++ M++ GI PD
Sbjct: 207 EGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPD 250


>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
          Length = 751

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 40/253 (15%)

Query: 7   HLDA-----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           HLD      A ++F ++    +EPDI+TYN +  G+C    + E   L +++    L+PN
Sbjct: 375 HLDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPN 434

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ---------- 111
           S+T+ I I  FC+ G + +A ++F+ + EKG     V YS ++ GY  S           
Sbjct: 435 SLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFV 494

Query: 112 -------------------------NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                    N++ A +V + M E+N+ P+++SYS LI   C+ G
Sbjct: 495 RVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNG 554

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M++A   FH  +   L  DV+ Y IL+ GYCKAGR  EA QL+  M   GI PD +  +
Sbjct: 555 DMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYT 614

Query: 207 TLADYNLQSSGSQ 219
            L D +L+ +  Q
Sbjct: 615 VLLDGHLKETLQQ 627



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 16/218 (7%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + +  + PD+I+Y+ +I  YC    +D+A   F  +    L  + I +TIL++ +CK GR
Sbjct: 531 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 590

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE--------------- 122
           + +A  +F +M   G K +V+ Y+ L+DG+ K    +    + +E               
Sbjct: 591 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 650

Query: 123 -MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I P++  Y++LIDG CK   + EA   F   L   L PD   Y  LI GYC  G
Sbjct: 651 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 710

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
             ++A  L   M+  GI PD L  S L   +L+S   Q
Sbjct: 711 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 748



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 22/224 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D AL+++ ++T+ G++PD   Y++ + G C   + D A  + +++   ++   
Sbjct: 213 LFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAYVILQEINREKVPVE 272

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +++D  CKE R+D+A  +      +G   +V  YS LI  Y K  N+  A D YE
Sbjct: 273 AMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYE 332

Query: 122 EMCENNISPN--IVSY-----------SILIDGLCK---------RGLMEEALYAFHCAL 159
            M  + I  N  IVSY           S +I    K         +G M+ A   F   L
Sbjct: 333 AMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKGEMQNAQQVFEEML 392

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
             ++ PD+VTY IL  G+CK+G   E   L D M   G+ P+ L
Sbjct: 393 KANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSL 436



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 51/253 (20%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------EKLTCV 56
           +L  A  LF  + ++G++   + Y++++CGY      D A  LF          +  +C 
Sbjct: 450 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCS 509

Query: 57  QL-------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +L                          P+ I+++ LI  +C+ G MD A + F  M+++
Sbjct: 510 KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 569

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +V+ Y+ L++GY K+  ++ A  ++ +M    I P++++Y++L+DG  K  L +  
Sbjct: 570 GLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGW 629

Query: 152 -----------LYAFHCAL-----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
                      L A H  L     D  + PDV  Y +LI G CKA    EA +L+D ML+
Sbjct: 630 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 689

Query: 196 NGIMPDGLLLSTL 208
            G+ PD    + L
Sbjct: 690 KGLTPDAYAYTAL 702



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 22/219 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KL      +G  PD+  Y+ +I  YC +  L +AV  +E +    ++ N
Sbjct: 283 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETN 342

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + L+  F K G   +    F K  + G              +     M++A  V+E
Sbjct: 343 CHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGL-------------HLDKGEMQNAQQVFE 389

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + NI P+IV+Y+IL  G CK GL+ E         D  L P+ +TY I I G+C+ G
Sbjct: 390 EMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGG 449

Query: 182 RPTEAMQLYDSMLRNGI---------MPDGLLLSTLADY 211
             +EA  L++ +   GI         M  G LLS   D+
Sbjct: 450 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 488



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 4/211 (1%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C     + A + LF  +   G+ P + T+N ++         +  +  + ++ C Q
Sbjct: 139 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 198

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+  TF I+  +  +  ++D+A  ++++M E G K +   YS  + G    +    A+
Sbjct: 199 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAY 258

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            + +E+    +    ++Y++++DGLCK   ++EA             PDV  Y+ LI+ Y
Sbjct: 259 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSY 318

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CK G   +A+  Y++M+ +GI  +  ++S L
Sbjct: 319 CKMGNLIKAVDHYEAMVSHGIETNCHIVSYL 349



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC--SLNRLDEAV-------------- 47
           K   L  A +LF Q+T+ G++PD+I Y  ++ G+   +L +  E +              
Sbjct: 587 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN 646

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +L   +  +Q++P+   +T+LID  CK   + +A  +F +ML+KG   +   Y+ LI+GY
Sbjct: 647 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 706

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
                +  A D+ +EM +  I P+ +++S+L
Sbjct: 707 CSQGEISKAEDLLQEMIDKGIEPDELTFSVL 737



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 57/102 (55%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL   + D  +EPD+  Y  +I G C    L EA +LF+++    L P++  +T LI+ +
Sbjct: 647 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 706

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           C +G +  A  +  +M++KG + + +T+S L     +S+ ++
Sbjct: 707 CSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 748



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 28/217 (12%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L PD+ T+  +        ++DEA+Q++ ++T + +KP++  ++  +   C   + D A 
Sbjct: 199 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAY 258

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
           ++  ++  +      + Y+ ++DG  K   +  A  + E       +P++  YS LI   
Sbjct: 259 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSY 318

Query: 143 CKRGLMEEAL-------------------YAFHCALDNHLLPDVVTYAILIRG---YCKA 180
           CK G + +A+                   Y   C     +  +V+ Y +  +    +   
Sbjct: 319 CKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDK 378

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G    A Q+++ ML+  I PD      +  YN+ +SG
Sbjct: 379 GEMQNAQQVFEEMLKANIEPD------IVTYNILASG 409



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 53/101 (52%)

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
           CLI       ++++   ++  +C   + P++ ++++L+  + + G  E  L A++     
Sbjct: 138 CLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCF 197

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            L PDV T+AI+ R   +A +  EA+Q++  M   G+ PD 
Sbjct: 198 QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDA 238


>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
 gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
          Length = 647

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++  +CS     +D+AV++F  +     K
Sbjct: 247 LVAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIP----K 302

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P++ ++  +ID  C+ GR+ +A  +F++M+  G    VVTY+ LI    +      A  +
Sbjct: 303 PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKL 362

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    I PN+V+YS LIDGLCK G    A+      +    LP+ +TY+ +I G CK
Sbjct: 363 FDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCK 422

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   +AM++ D M   G  PD  L   L
Sbjct: 423 EGCLGQAMEILDRMRLQGRKPDAGLFGKL 451



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 101/199 (50%), Gaps = 4/199 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++F  +     +PD  +YNT+I G C   RL EA  LF ++      P  +T+T 
Sbjct: 290 IDDAVRVFRNIP----KPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTT 345

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    +E   DDA  +F +M  +G   NVVTYS LIDG  K     SA ++ + M +  
Sbjct: 346 LIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKER 405

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN ++YS +IDGLCK G + +A+            PD   +  LI G C AGR  EA 
Sbjct: 406 KLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEAS 465

Query: 188 QLYDSMLRNGIMPDGLLLS 206
              D M   GI P+ L  S
Sbjct: 466 NYLDEMNFAGIRPNRLTWS 484



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 10  AALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AAL LF       GL     +Y  ++    + + L  A  L   +      P + T+ +L
Sbjct: 219 AALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVL 278

Query: 69  IDAFCKEGR--MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + A C +    +DDA  +F  +    PK +  +Y+ +IDG  +   +  A D++ EM  N
Sbjct: 279 VKAHCSDAAVPIDDAVRVFRNI----PKPDACSYNTVIDGLCRRGRLPEARDLFAEMIAN 334

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P +V+Y+ LI  L +    ++AL  F       ++P+VVTY+ LI G CK GR   A
Sbjct: 335 GTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASA 394

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L D M++   +P+ +  S++ D
Sbjct: 395 VELLDRMVKERKLPNTITYSSVID 418



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L +E   D ALKLF ++  RG+ P+++TY+++I G C   R   AV+L +++   +  P
Sbjct: 349 WLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLP 408

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+IT++ +ID  CKEG +  A  +  +M  +G K +   +  LI G   +     A +  
Sbjct: 409 NTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYL 468

Query: 121 EEMCENNISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           +EM    I PN +++S+       ++  LC +G +  A   +       +     T+ +L
Sbjct: 469 DEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLL 528

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMP-----DGLLLSTLADYNLQSSGS 218
           +    K     +A  +   ML    +P     D ++ +  +   L++ GS
Sbjct: 529 VECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKKKLRAVGS 578


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 108/197 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  H+  A++    + + G +PDI+TYNT+I G C   ++ EA QL E+     L PN  
Sbjct: 321 KHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF 380

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T LI A+CK+G  D A+    +M E+G K ++VTY  L+ G   +  +  A  + E+M
Sbjct: 381 SYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM 440

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + P+   Y+IL+ GLCK+  +  A       LD  +LPD   YA L+ G+ + G  
Sbjct: 441 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 500

Query: 184 TEAMQLYDSMLRNGIMP 200
            EA +L++  +  G+ P
Sbjct: 501 DEARKLFELTIEKGMNP 517



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L AA  L  ++ D+ + PD   Y T++ G+     LDEA +LFE      + P 
Sbjct: 459 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  +CK G M DA    ++M ++    +  TYS +IDGY K  ++  A  ++ 
Sbjct: 519 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFR 578

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +    PN+V+Y+ LI+G C++G +  +L  F       L+P+VVTY+ILI  +CK  
Sbjct: 579 EMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA 638

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A   ++ ML N  +P+ +  + L +
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVN 667



 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 101/180 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+  +LD A KLF    ++G+ P I+ YN +I GYC    + +A+    ++    L P+
Sbjct: 494 FIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD 553

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ +ID + K+  +D A  MF +M++   K NVVTY+ LI+G+ +  ++  +  ++ 
Sbjct: 554 EFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFR 613

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN+V+YSILI   CK   + +A   F   L N  +P+ VT+  L+ G+ K G
Sbjct: 614 EMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D A     ++T+RG +PD++TY  ++ G      +D A+ + EK+    + P++ 
Sbjct: 391 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 450

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + IL+   CK+ ++  A ++ ++ML++    +   Y+ L+DG+ ++ N+  A  ++E  
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  ++P IV Y+ +I G CK G+M++A+   +     HL PD  TY+ +I GY K    
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +++  M++    P+ +  ++L +
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLIN 597



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 108/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D AL +  ++ +RG+ PD   YN ++ G C   +L  A  L  ++    + P+
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  L+D F + G +D+A  +F   +EKG    +V Y+ +I GY K   MK A     
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + +++P+  +YS +IDG  K+  ++ A   F   +     P+VVTY  LI G+C+ G
Sbjct: 544 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +++++  M   G++P+ +  S L
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSIL 630



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 95/200 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+   KL      +G  P+II YNT+I GYC    ++ A  LF +L      P 
Sbjct: 214 LCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPT 273

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  +I+ FCK+G       +  +M  +G   NV  Y+ +ID  +K  ++  A +  E
Sbjct: 274 VETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE 333

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E    P+IV+Y+ LI G C+ G + EA      AL   L+P+  +Y  LI  YCK G
Sbjct: 334 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A      M   G  PD
Sbjct: 394 GYDRASNWLIEMTERGHKPD 413



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 116/235 (49%), Gaps = 14/235 (5%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  LD A K+F ++     +P+++TY ++I G+C    L  ++++F ++    L PN 
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS------------ 110
           +T++ILI +FCKE ++ DA   F +ML      N VT++ L++G+ K+            
Sbjct: 625 VTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEF 684

Query: 111 -QNMKSAF-DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            +N +S F + +  M  +  +P   +Y+ ++  LC+ G+   AL   +       +PD V
Sbjct: 685 QENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSV 744

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           ++  L+ G C  GR  E   +    L    +   +  S++ D  L    S+   I
Sbjct: 745 SFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEASVI 799



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+    A  +L  ++  RGL  ++  YNTII        + +AV+  E +     KP+ +
Sbjct: 286 KKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIV 345

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   C++G++ +A  +  + L KG   N  +Y+ LI  Y K      A +   EM
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 405

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P++V+Y  L+ GL   G ++ AL      L+  + PD   Y IL+ G CK  + 
Sbjct: 406 TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL 465

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  L   ML   ++PD  + +TL D
Sbjct: 466 PAAKLLLAEMLDQSVLPDAFVYATLVD 492



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 47/220 (21%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKL--------TCVQLKPNSITFTILIDAFCKEG 76
           PD+I  N+++     L R++ A +L++++         CV    ++ +  I++   CKEG
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCV----DNYSTCIMVKGLCKEG 218

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++++   +      +G   N++ Y+ LIDGY K  +M+ A  ++ E+      P + +Y 
Sbjct: 219 KLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYG 278

Query: 137 ILIDGLCKRG--------LME---------------------------EALYAFHCALDN 161
            +I+G CK+G        LME                           +A+      ++ 
Sbjct: 279 AIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIEC 338

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              PD+VTY  LI G C+ G+ +EA QL +  L  G+MP+
Sbjct: 339 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN 378



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L  FG++   G  P    YN+I+   C       A+QL  K+T     P+S++F  L+  
Sbjct: 693 LNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHG 752

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            C EGR  +   + S  L +      V YS ++D Y   Q    A  + + M E
Sbjct: 753 VCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYL-PQGTSEASVILQTMFE 805



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 2/104 (1%)

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           GP  N   YS L+    +S+       V E M    +SP   + SI+I      GL+E+A
Sbjct: 90  GP-INGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKA 148

Query: 152 LYAFHCALDNHL-LPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           L  ++  L  +   PDV+    L+    K GR   A +LYD ML
Sbjct: 149 LELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML 192


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 110/202 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HLD+A +L   + +RGL PD  TY   I   C  NR++EA +LF+ LT   +  N I ++
Sbjct: 342 HLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYS 401

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID +CK G++D+A  +F KML K    N  T++ LI G   + N+K A  ++++M + 
Sbjct: 402 VLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM 461

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P + +++ILI  + K+G  ++A       + +   P   TY   I  YC AG+  EA
Sbjct: 462 GLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEA 521

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             +   M   G+ PD    ++L
Sbjct: 522 EDMMVQMKEEGVPPDDFTYTSL 543



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 105/194 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A+ L  ++ +R L PD+ITYN++I G C    LD A +L   +    L P+  T+ 
Sbjct: 307 NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             ID  CK  R+++A  +F  + E+G  ANV+ YS LIDGY K   +  A  ++E+M   
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N SPN  +++ LI GLC  G ++EAL  F   +   L P V T+ ILI    K G   +A
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDA 486

Query: 187 MQLYDSMLRNGIMP 200
            +    M+ +G  P
Sbjct: 487 HKCLQKMMSSGEKP 500



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 1/194 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A+ LF ++ D    P++ TY  +I G C  N + +A+ L +++    L P+ IT+ 
Sbjct: 273 RIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYN 331

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C+ G +D A  + S M E+G   +  TY C ID   KS  ++ A  +++ + E 
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE 391

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +S N++ YS+LIDG CK G ++EA   F   L  +  P+  T+  LI G C AG   EA
Sbjct: 392 GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEA 451

Query: 187 MQLYDSMLRNGIMP 200
           + L+D M++ G+ P
Sbjct: 452 LSLFDQMVKMGLKP 465



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+A ++F ++ +R    + ++YN +I G C   R+DEAV LF ++      PN  T+T 
Sbjct: 243 VDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTA 298

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C++  +  A  +  +MLE+    +++TY+ LI G  ++ ++ SA+ +   M E  
Sbjct: 299 LIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERG 357

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y   ID LCK   +EEA   F    +  +  +V+ Y++LI GYCK G+  EA 
Sbjct: 358 LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAG 417

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            L++ ML     P+    + L  + L S+G+
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALI-HGLCSAGN 447



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 95/193 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +LF  LT+ G+  ++I Y+ +I GYC + ++DEA  LFEK+      PN
Sbjct: 372 LCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPN 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF  LI   C  G + +A  +F +M++ G K  V T++ LI    K  +   A    +
Sbjct: 432 AYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQ 491

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +   P   +Y+  I+  C  G ++EA        +  + PD  TY  LI+ Y K G
Sbjct: 492 KMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLG 551

Query: 182 RPTEAMQLYDSML 194
               A  +  SM 
Sbjct: 552 LTYSAFDVLKSMF 564



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 12/213 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIIT------YNTIICGYCSLNRLDEAVQLFEKLTC 55
           +IK C+  A   LF     R +  D IT      YN ++        +DE  QL+ ++  
Sbjct: 127 MIKCCY-SAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLE 185

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
             +  +  TF ++I+ +CK G + +A     KM++ G   +  T +  I GY +S+++ S
Sbjct: 186 EFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDS 245

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           AF V+EEM       N VSY+ LI GLC+ G ++EA+  F    D+   P+V TY  LI+
Sbjct: 246 AFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIK 301

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G C+     +AM L D ML   ++PD +  ++L
Sbjct: 302 GLCRKNV-HKAMGLLDEMLERNLVPDLITYNSL 333



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 81/168 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  LF ++  +   P+  T+N +I G CS   L EA+ LF+++  + LKP   TF I
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K+G  DDA     KM+  G K    TY+  I+ Y  +  ++ A D+  +M E  
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           + P+  +Y+ LI    K GL   A        D    P   T+  LI+
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIK 580



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 29/231 (12%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  AL LF Q+   GL+P + T+N +I         D+A +  +K+     KP + T+ 
Sbjct: 447 NLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYN 506

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             I+ +C  G++ +A  M  +M E+G   +  TY+ LI  Y K     SAFDV + M + 
Sbjct: 507 AFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDA 566

Query: 127 NISPNIVSYSILIDGLC-KRGLMEEA----------------------------LYAFHC 157
           +  P+  ++  LI  L  KR ++E++                            +  F  
Sbjct: 567 DCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEE 626

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +   PD   Y  LI G CK      A++L D M + GI P  ++ + +
Sbjct: 627 MEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAV 677



 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K    D  ++LF ++   G  PD   Y  +I G C +  L  A++L +++    + P+
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  +I   CK  +  +A  +   M+  G    +     LI G ++    +    V++
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK 730

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           ++     + + +++ ILIDG+ K+GL+EE    F     N       TY+IL +
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQ 784



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  ALKL  Q+   G+ P  + +N +I   C L +  EA  + E + C    P      
Sbjct: 651 NLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCK 710

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    +EG  +    +F K+   G   + + +  LIDG  K   ++    ++EEM +N
Sbjct: 711 TLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKN 770

Query: 127 --NISPNIVSYSILIDGL 142
             N SP   +YSIL   L
Sbjct: 771 GCNFSPR--TYSILTQKL 786



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 68/156 (43%)

Query: 42  RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
             D  ++LFE++      P+S  +  LI   CK   +  A  +  +M ++G   + + ++
Sbjct: 616 EFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I    K Q    A ++ E+M  +  SP +     LI GL + G  E     F      
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGC 735

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
               D + + ILI G  K G   E  QL++ M +NG
Sbjct: 736 GYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 112/193 (58%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL L  ++ ++GLE DI  Y  +I G C++++LDEA  L  K+    L+PN I +T +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DA  K G++ +A  M  K+L+ G + NV+TY  LIDG  K+ ++  A   + +M +  +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+ +Y+ L+DGLCK G + EA+  F+  +   +  D V Y  L+ GY K G   +A  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 189 LYDSMLRNGIMPD 201
           L   M+ +G+  D
Sbjct: 595 LKAKMIDSGLQLD 607



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 120/219 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  LF ++ + G  PD++T+N++I GY     LDE  QL E++     K +
Sbjct: 198 LCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKAD 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK GRM+ A   F+ M  +G  ANVVT+S  +D + K   ++ A  ++ 
Sbjct: 258 VVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFA 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++ N  +Y+ LIDG CK G +++A+      +   +  +VVTY +L+ G CK  
Sbjct: 318 QMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA  +   M + G+  + LL +TL   +  +  S++
Sbjct: 378 KVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 2/197 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A+ +  ++ D G +P++ITY  +I G C    +DEA+  F K+  + L PN  
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L+D  CK G +++A  +F++M+ KG   + V Y+ L+DGY K  N+  AF +  +M
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++ +  ++  Y+  I G C   +M EA   F   + + + PD   Y  LI  Y K G  
Sbjct: 600 IDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659

Query: 184 TEAMQLYDSMLRNGIMP 200
            EA+ L D M R  ++P
Sbjct: 660 EEAISLQDEMER--VLP 674



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 103/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  L  ++ + GLEP+ I Y T++       ++ EA+ + +K+     +PN IT+  
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G +D+A   F+KM + G   NV  Y+ L+DG  K+  +  A  ++ EM    
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +S + V Y+ L+DG  K+G + +A       +D+ L  D+  Y   I G+C      EA 
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 188 QLYDSMLRNGIMPD 201
           +++  M+ +GI PD
Sbjct: 629 EVFSEMIGHGIAPD 642



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KLF Q+  RG+  +  TY  +I G C   RLD+A+ L +++    +  N +
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+L+D  CKE ++ +A  +   M + G +AN + Y+ LI G+F ++N + A  +  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 124 -------------------C----------------ENNISPNIVSYSILIDGLCKRGLM 148
                              C                E+ + PN + Y+ ++D   K G +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA+      LD+   P+V+TY  LI G CKAG   EA+  ++ M   G+ P+    + L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 209 AD 210
            D
Sbjct: 545 VD 546



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 108/214 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A   F  +   G+  +++T++T +  +C    + EA++LF ++    +  N  T+T
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYT 332

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK GR+DDA ++  +M+ +G   NVVTY+ L+DG  K + +  A DV   M + 
Sbjct: 333 CLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N + Y+ LI G       E+AL       +  L  D+  Y  LI+G C   +  EA
Sbjct: 393 GVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             L   M  +G+ P+ ++ +T+ D   +S    E
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 35/246 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ L  ++  +G+  +++TY  ++ G C   ++ EA  +   +    ++ N +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 64  TFTILI-----------------------------------DAFCKEGRMDDATMMFSKM 88
            +T LI                                      C   ++D+A  + +KM
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E G + N + Y+ ++D  FKS  +  A  + +++ ++   PN+++Y  LIDGLCK G +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +EA+  F+   D  L P+V  Y  L+ G CK G   EA+QL++ M+  G+  D ++ + L
Sbjct: 520 DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTAL 579

Query: 209 ADYNLQ 214
            D  L+
Sbjct: 580 LDGYLK 585



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 4/191 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++   ++ +  + P+  T N I+             +LFE+L      PN  TF I
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CKEG + +A  +FS+M E G   +VVT++ LIDGY K   +     + EEM  + 
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ LI+  CK G ME A   F       ++ +VVT++  +  +CK G   EAM
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 188 QLYDSMLRNGI 198
           +L+  M   G+
Sbjct: 314 KLFAQMRVRGM 324



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 85/151 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F ++ D GL+P++  Y  ++ G C    L+EAVQLF ++    +  +
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T L+D + K+G + DA  + +KM++ G + ++  Y+C I G+     M  A +V+ 
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 632

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           EM  + I+P+   Y+ LI    K G +EEA+
Sbjct: 633 EMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K C    AL LF ++TDRG+ P+ I Y+ ++ G C   ++ +A +LF K+       +
Sbjct: 208 LCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRD 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +L++ FCK G +DDA  +   + + G    V+ Y CLI+G F+++  + A   Y+
Sbjct: 268 LITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQ 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   NI P+++ Y+I+I GL + G + EAL       +  L PD + Y  LI+G+C  G
Sbjct: 328 KMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMG 387

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA  L   + ++   P+    S L
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSIL 414



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 127/236 (53%), Gaps = 16/236 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  AL L G++T+RGL PD I YN +I G+C +  LDEA  L  +++     PN
Sbjct: 348 LSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPN 407

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++ILI   CK G ++ A  +F +M + G   +VVT++ LI+G  K+  ++ A  ++ 
Sbjct: 408 NHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFY 467

Query: 122 EMCENNISP--------------NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
           +M E    P              +I S  ++++ LC+ G++ +A       +D+ +LPD+
Sbjct: 468 QM-EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            TY ILI G+CK G    A +L+  M   G MPD +   TL D  L  +G  E  +
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID-GLYRAGRNEDAL 581



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 113/202 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+++     AL ++ Q+    L PD++TY  +I G C   +  +A+ LF+++T   + PN
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I ++I++   C+  ++ DA  +FSKM   G   +++TY+ L++G+ KS  +  AF + +
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++     ++ Y  LI+GL +    EEA   +   L  ++ PDV+ Y I+IRG  + G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
           R TEA+ L   M   G+ PD +
Sbjct: 353 RVTEALTLLGEMTERGLRPDTI 374



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 100/190 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +LD A  L   LT  G    +I Y  +I G     R +EA   ++K+    +KP+ +
Sbjct: 280 KSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVM 339

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +TI+I    +EGR+ +A  +  +M E+G + + + Y+ LI G+     +  A  +  E+
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +++  PN  +YSILI G+CK GL+ +A + F        LP VVT+  LI G CKA R 
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459

Query: 184 TEAMQLYDSM 193
            EA  L+  M
Sbjct: 460 EEARLLFYQM 469



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 15/203 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI---- 63
           ++ A  +F ++   G  P ++T+N++I G C  NRL+EA  LF ++  V+ KP+      
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSLFLRLS 482

Query: 64  ----------TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
                     +  ++++  C+ G +  A  +  ++++ G   ++ TY+ LI+G+ K  N+
Sbjct: 483 QGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNI 542

Query: 114 KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
             AF +++EM      P+ V+Y  LIDGL + G  E+AL  F   +    +P+  TY  +
Sbjct: 543 NGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602

Query: 174 IRGYCKAGRPTEAMQLYDSMLRN 196
           +   C+    + A+ ++   LR+
Sbjct: 603 MTWSCRENNISLALSVWMKYLRD 625



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 87/157 (55%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           N  +   ++ ++L    +K +S  F++LI+A+ + G  + A   FS M +   K ++  +
Sbjct: 107 NAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAF 166

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + ++    + +    A  VY +M + N++P++V+Y ILI GLCK    ++AL  F    D
Sbjct: 167 NLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
             +LP+ + Y+I++ G C+A +  +A +L+  M  +G
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 98/196 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIKE   +   K+  +L +  ++     ++ +I  Y      ++AV+ F  +     KP+
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPD 162

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F +++    ++     A  ++++ML+     +VVTY  LI G  K+   + A  +++
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  I PN + YSI++ GLC+   + +A   F     +    D++TY +L+ G+CK+G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 182 RPTEAMQLYDSMLRNG 197
              +A  L   + ++G
Sbjct: 283 YLDDAFTLLQLLTKDG 298



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 74/142 (52%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I    KE   +    +  ++     K +   +S LI+ Y ++   + A + +  M + 
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDF 157

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  P++ ++++++  L ++     AL  ++  L  +L PDVVTY ILI G CK  +  +A
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L+D M   GI+P+ ++ S +
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIV 239



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 13/201 (6%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A KLF ++  +G  PD +TY T+I G     R ++A+++FE++      P S T+ 
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600

Query: 67  ILIDAFCKEGRMDDATMMFSKMLE-----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ++   C+E  +  A  ++ K L      +  K  VV  S      F ++ +++A     
Sbjct: 601 TIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAES------FDNEELQTAIRRLL 654

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   + + ++  Y+I + GL +     EA   F    D  +     +  +LI   C   
Sbjct: 655 EMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVE 714

Query: 182 RPTEAMQLYDSMLRNG--IMP 200
               AM ++   L  G  +MP
Sbjct: 715 NLDMAMDVFLFTLERGFRLMP 735


>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Brachypodium distachyon]
          Length = 560

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 116/208 (55%), Gaps = 8/208 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQLKPNSI 63
           +  AL+L  ++ + G  PD +T N ++ G C +  +    ++  +L     C+   PN +
Sbjct: 244 VQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCM---PNVV 300

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I  +CK GRM+DA  +++ M+  G   N VTY+ LI+GY K+ NM SA  VY++M
Sbjct: 301 TYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQM 360

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++V++S LIDG C+ G +++A+  +       + P+  T++I+I  +CK  R 
Sbjct: 361 ILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRS 420

Query: 184 TEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
            EA++    + +R  I P   + + + D
Sbjct: 421 AEALRFLKELNMRTDIAPRAFICNPVID 448



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A+ ++  +   G  P+ +TYN +I GY     +  AV +++++   +  P+ +
Sbjct: 311 KSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVV 370

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF+ LID +C+ G++DDA   +++M +   + N  T+S +I  + K      A    +E+
Sbjct: 371 TFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKEL 430

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
               +I+P     + +ID LCK G ++EA             PD  TY ILI G+C  GR
Sbjct: 431 NMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGR 490

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +EA+  ++ M+  G  PD + +++ 
Sbjct: 491 ISEAITFFNKMVDTGCSPDSITVNSF 516



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 2/205 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-LTCVQLKPNSITFT 66
           LDAA  L  +    G   +   YN ++  +    R+ +AV LFE  +      P+  +F 
Sbjct: 173 LDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFN 232

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + I   C+ G +  A  +  +M E G   + VT + L+ G  + + +    +V   +  +
Sbjct: 233 VAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRD 292

Query: 127 NIS-PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            +  PN+V+Y+ +I G CK G ME+A+  ++  +     P+ VTY +LI GY KAG    
Sbjct: 293 GVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGS 352

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+ +Y  M+     PD +  STL D
Sbjct: 353 AVAVYQQMILRRCPPDVVTFSTLID 377



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 5/185 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++ +A+ ++ Q+  R   PD++T++T+I GYC   +LD+A++ + +++  Q++PN+ 
Sbjct: 346 KAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAH 405

Query: 64  TFTILIDAFCKEGRMDDATMMFSKM---LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           TF+I+I +FCK+ R  +A     ++    +  P+A +     +ID   K   +  A  + 
Sbjct: 406 TFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNP--VIDVLCKGGKVDEANLIL 463

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM      P+  +Y+ILI G C +G + EA+  F+  +D    PD +T    I    KA
Sbjct: 464 MEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKA 523

Query: 181 GRPTE 185
           G P+E
Sbjct: 524 GMPSE 528



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 11/215 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLK 59
           ML +      ALKLF Q+TD+        + + + G C+    LD A  L  K       
Sbjct: 130 MLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCC 189

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFD 118
             +  +  L+++F   GR+ DA  +F   ++ G    +V +++  I G  +  +++ A +
Sbjct: 190 VEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALE 249

Query: 119 VYEEMCENNISPNIVSYSILIDGLCK-----RGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           + E M E   SP+ V+ +IL+ GLC+     RG   E L       D   +P+VVTY  +
Sbjct: 250 LVERMAEFGCSPDTVTNNILVGGLCRVKEVSRG--REVLRRLQ--RDGVCMPNVVTYTSV 305

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           I GYCK+GR  +AM +Y+ M+  G  P+ +  + L
Sbjct: 306 ISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVL 340



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 9   DAALKLFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-PNSITF 65
            + L+LF  L  +   + P   +Y  +I   C  +R  +A++LF+++T      PN+   
Sbjct: 101 SSTLQLFSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFL 160

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + L  +    G +D A  + SK  + G       Y+ L++ +     ++ A  ++E   +
Sbjct: 161 SFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQ 220

Query: 126 NNI-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
               SP++ S+++ I G+C+ G +++AL       +    PD VT  IL+ G C+    +
Sbjct: 221 GGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVS 280

Query: 185 EAMQLYDSMLRNGI-MPD 201
              ++   + R+G+ MP+
Sbjct: 281 RGREVLRRLQRDGVCMPN 298



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 36/76 (47%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   +D A  +  ++  +G  PD  TY  +I G+C   R+ EA+  F K+      P
Sbjct: 449 VLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSP 508

Query: 61  NSITFTILIDAFCKEG 76
           +SIT    I    K G
Sbjct: 509 DSITVNSFIGCLLKAG 524


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A +L  ++   GL P++I+YNT+I GYCS+  LD+A  LF ++      P+
Sbjct: 301 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPS 360

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILI  F +       T M  +M  +G   + VTY+ L+D   +S N++ AF +Y 
Sbjct: 361 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 420

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  +  +I  Y +LI GLC  G M+EA   F    + HL P+ V Y  +I GYCK G
Sbjct: 421 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEG 480

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
               A++L   M  NG++P+      +A YN
Sbjct: 481 SSYRALRLLKEMGENGMVPN------VASYN 505



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 115/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A +LF ++ +RG+  +++TYNT+I G C   R+ EA +L  ++    L PN I++  
Sbjct: 272 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 331

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +C  G +D A+ +F++M   G   ++ TY+ LI G+ +++N     D+  EM    
Sbjct: 332 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 391

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP+ V+Y+IL+D L +   +E+A   +       L+ D+  Y +LI G C  G   EA 
Sbjct: 392 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+ S+    + P+ ++ +T+
Sbjct: 452 KLFKSLDEMHLKPNDVIYNTM 472



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 1/210 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LIK    + A ++F + T   ++ D+ ++  +I G C +  LD+  ++  ++  + L P
Sbjct: 126 LLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSP 184

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + +T LID  CK G ++    +F KM E    AN  TY+ LI+G+FK    K   ++Y
Sbjct: 185 NVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELY 244

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E+M    I PN+ +Y+ +I   C  G +  A   F    +  +  +VVTY  LI G C+ 
Sbjct: 245 EKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQE 304

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  EA +L   M R+G+ P+ +  +TL D
Sbjct: 305 RRVLEAERLMCRMKRDGLSPNLISYNTLID 334



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 39/254 (15%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C    +LD   ++ GQ+ + GL P+++ Y T+I G C    ++   QLF K+  +
Sbjct: 156 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 215

Query: 57  QLKPNSITFTILIDAF-----------------------------------CKEGRMDDA 81
            +  N  T+T+LI+ F                                   C +G++++A
Sbjct: 216 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 275

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M E+G   NVVTY+ LI G  + + +  A  +   M  + +SPN++SY+ LIDG
Sbjct: 276 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 335

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C  G +++A   F+    +   P + TY ILI G+ +A        +   M   G+ P 
Sbjct: 336 YCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 395

Query: 202 GLLLSTLADYNLQS 215
            +  + L D  ++S
Sbjct: 396 KVTYTILMDALVRS 409



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  LF Q+   G  P + TYN +I G+           +  ++    L P+ +T+T
Sbjct: 341 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 400

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+DA  +   ++ A  ++S M + G  A++  Y  LI G     +MK A  +++ + E 
Sbjct: 401 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 460

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++ PN V Y+ +I G CK G    AL       +N ++P+V +Y   I   CK  + TEA
Sbjct: 461 HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEA 520

Query: 187 MQLYDSMLRNGIMP 200
             L   M+  G+ P
Sbjct: 521 EVLLKDMIELGLKP 534



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 71/137 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  +++ A +++  +   GL  DI  Y  +I G C +  + EA +LF+ L  + LKPN
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 465

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  +CKEG    A  +  +M E G   NV +Y+  I    K +    A  + +
Sbjct: 466 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLK 525

Query: 122 EMCENNISPNIVSYSIL 138
           +M E  + P+I  ++++
Sbjct: 526 DMIELGLKPSISIWNMI 542



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A KLF  L +  L+P+ + YNT+I GYC       A++L +++    + PN  ++  
Sbjct: 447 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            I   CK+ +  +A ++   M+E G K ++  ++ +    F
Sbjct: 507 TIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARF 547


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 112/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++P+++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G   ++V +S +I+   K   +  A ++++      
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P  V YS+L+DG C  G ME+AL  F   +   + P+ V Y  L+ GYCK GR  E +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  ML+ GI P  +L + + D
Sbjct: 590 SLFREMLQKGIKPSTILYNIIID 612



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 13/211 (6%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  DII  N ++ G+C   R DEA+ +      +L CV   P+  +++
Sbjct: 130 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCV---PDVFSYS 186

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     +VV Y+ +IDG+FK  ++  A D+++EM 
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 246

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P+ V+YS ++  LCK   M++A       ++  +LP+  TY  LI GY   G+  
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306

Query: 185 EAMQLYDSMLRNGIMPD----GLLLSTLADY 211
           EA++++  M R  I+PD     +L+ +L  Y
Sbjct: 307 EAVRVFKEMRRQSILPDVVTFNMLMGSLCKY 337



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 120/207 (57%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ P I T+N +I  Y +   LD+A+ +F ++    +KPN +
Sbjct: 372 KGCLVDMT-DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL 430

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +I A C+ G+MDDA   F++M+++G   +   Y CLI G+    ++  A ++  E+
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +S +I+ LCK G + +A   F   ++  L P  V Y++L+ GYC  G+ 
Sbjct: 491 MNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ ++  TL +
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVN 577



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 112/199 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+ + Y T++ GYC + R+DE + LF ++    +KP++I + I
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 609

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A + F +M E G   N  TYS ++ G FK++    A  +++E+   N
Sbjct: 610 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 669

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I++ + +I G+ +   +EEA   F     + L+P VVTY+I+I    K G   EA 
Sbjct: 670 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  PD  LL+
Sbjct: 730 DMFSSMQNAGCEPDSRLLN 748



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 116/200 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++G+ P+  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +L+ + CK G++ +A  +F  M  KG   +V +Y+ +++GY     +    D+++
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P I ++++LI      G++++A+  F+   D+ + P+V+TY  +I   C+ G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G+ PD
Sbjct: 444 KMDDAMEKFNQMIDQGVAPD 463



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 98/176 (55%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++ YNT+I G+     +++A  LF+++    + P+ +T++ ++ A CK   MD A   
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ KG   N  TY+ LI GY  +   K A  V++EM   +I P++V++++L+  LCK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI P
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 99/191 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ PD   Y+ +I G+C+   L +A +L  ++    +  + + F+ 
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G     V YS L+DGY     M+ A  V++ M    
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN V Y  L++G CK G ++E L  F   L   + P  + Y I+I G  +AGR   A 
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 188 QLYDSMLRNGI 198
             +  M  +GI
Sbjct: 625 VKFHEMTESGI 635



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 110/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++  + + PD++T+N ++   C   ++ EA  +F+ +      P+  ++ I+++
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  +G + D T +F  ML  G    + T++ LI  Y     +  A  ++ EM ++ + P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+ +I  LC+ G M++A+  F+  +D  + PD   Y  LI+G+C  G   +A +L 
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ++ NG+  D +L S++
Sbjct: 488 SEIMNNGMHLDIVLFSSI 505



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 111/210 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ +++II   C L R+ +A  +F+    V L P ++ +++L+D
Sbjct: 483 AKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + N V Y  L++GY K   +     ++ EM +  I P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+I+IDGL + G    A   FH   ++ +  +  TY+I++RG  K     EA+ L+
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 662

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  D + L+T+     Q+   +E
Sbjct: 663 KELRAMNVKIDIITLNTMIAGMFQTRRVEE 692



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 3/154 (1%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + +++  + L+ G+ +++    A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SYSIL+  LC +G   +A        +   +  PDVV Y  +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+ K G   +A  L+  M++ GI PD +  S++
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 72/149 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ DIIT NT+I G     R++EA  LF  ++   L P 
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+I    KEG +++A  MFS M   G + +    + ++    K   +  A     
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 768

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEE 150
           ++ E N S   ++  +L+D    +G   E
Sbjct: 769 KIDERNFSLEHLTTMLLVDLFSSKGTCRE 797


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 39/246 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L+    +D+A ++F  +    ++PDI+TYNT+I GYC   +  +A++    +        
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291

Query: 54  ------------------TCV-----------QLKPNSITFTILIDAFCKEGRMDDATMM 84
                             +CV           Q+ P++  F+++I   CKEG++++   +
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTV 349

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F  M+ KG K NV  Y+ LIDGY KS +++ A  +   M +    P++V+YS++++GLCK
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G +EEAL  FH    + L  + + Y+ LI G  KAGR  EA +L++ M   G   D   
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469

Query: 205 LSTLAD 210
            + L D
Sbjct: 470 YNALID 475



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L ++ ++ + G+EP + TYN ++ G  S   +D A ++FE +   ++KP+ +T+  +I  
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +CK G+   A      M  +G +A+ +TY  +I   +   +  S   +Y+EM E  I   
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             ++S++I GLCK G + E    F   +     P+V  Y +LI GY K+G   +A++L  
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M+  G  PD +  S + +
Sbjct: 387 RMIDEGFKPDVVTYSVVVN 405



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 1/200 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A++L  ++ D G +PD++TY+ ++ G C   R++EA+  F       L  NS+
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID   K GR+D+A  +F +M EKG   +   Y+ LID + K + +  A  +++ M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E      + +Y+IL+ G+ K    EEAL  +   +D  + P    +  L  G C +G+
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
              A ++ D +   G++ D 
Sbjct: 554 VARACKILDELAPMGVILDA 573



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+    +F  +  +G +P++  Y  +I GY     +++A++L  ++     KP+
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++++++  CK GR+++A   F      G   N + YS LIDG  K+  +  A  ++E
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV-TYAILIRGYCKA 180
           EM E   + +   Y+ LID   K   ++EA+  F    +       V TY IL+ G  K 
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            R  EA++L+D M+  GI P       L+
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACFRALS 545



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
            V   + LI  + K   ++    V+ +M EN I P + +Y+ L++GL     ++ A   F
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                  + PD+VTY  +I+GYCKAG+  +AM+    M   G   D +   T+
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 113/208 (54%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A  +  Q+ DRG  PD  T+NT+I   CS NRL+EA+ L  +LT   L P+
Sbjct: 345 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+A CK G       +F +M   G   + VTY+ LID       + +A D+ +
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKA 180
           EM  N    + V+Y+ +ID LCK+  +EEA   F   +D H +    VT+  LI G CKA
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD-QMDAHGISRSAVTFNTLIDGLCKA 523

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            R  +A +L + M++ G+ P  +  +++
Sbjct: 524 KRIDDATELIEQMVKEGLQPSNITYNSI 551



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 107/190 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            ++LF ++   G  PD +TYN +I   CS+ +L  A+ L +++       +++T+  +ID
Sbjct: 424 GIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIID 483

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK+ R+++A  +F +M   G   + VT++ LIDG  K++ +  A ++ E+M +  + P
Sbjct: 484 ALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++Y+ ++   CK+G +++A         N    DVVTY  LI G CKAGR   A++L 
Sbjct: 544 SNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLL 603

Query: 191 DSMLRNGIMP 200
             M   GI P
Sbjct: 604 RGMRIKGIRP 613



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 36/227 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L  ++   G     +TYNTII   C   R++EA ++F+++    +  +++TF  LID
Sbjct: 459 ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLID 518

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK  R+DDAT +  +M+++G + + +TY+ ++  Y K  ++K A D+ E M  N    
Sbjct: 519 GLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEI 578

Query: 131 NIVSYSILIDGLCK-----------RGL------------------------MEEALYAF 155
           ++V+Y  LI+GLCK           RG+                        + +AL  F
Sbjct: 579 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF 638

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
               +    PD +TY I+ RG C+ G P  EA      M+  G MP+
Sbjct: 639 REMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +  L+ AL L  +LT +GL PD+ T+N +I   C +      ++LFE++      P+
Sbjct: 380 LCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPD 439

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILID  C  G++ +A  +  +M   G   + VTY+ +ID   K   ++ A +V++
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + IS + V+++ LIDGLCK   +++A       +   L P  +TY  ++  YCK G
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  + ++M  NG   D +   TL
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTL 586



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++TDRG++PD++T NT+I   C  +++  AV + E+++   + P+  TFT L+  F 
Sbjct: 182 VYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFI 241

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +EG ++ A  + +KM+E G     VT + LI+GY K   ++ A    ++   +   P+ V
Sbjct: 242 EEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQV 301

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+  +  LC+ G +  AL      L     PDV TY  +I    K G   EA  + + M
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 194 LRNGIMPDGLLLSTL 208
           +  G +PD    +TL
Sbjct: 362 VDRGCLPDTTTFNTL 376



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 109/210 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+E  ++AAL++  ++ + G  P  +T N +I GYC + R+++A+   +K      +P+
Sbjct: 240 FIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPD 299

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+   +   C+ G +  A  +   ML++G   +V TY+ +I+   K+  +  A  +  
Sbjct: 300 QVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVN 359

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+  +++ LI  LC +  +EEAL          L PDV T+ ILI   CK G
Sbjct: 360 QMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 419

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            P   ++L++ M  +G  PD +  + L D+
Sbjct: 420 DPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 101/200 (50%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA   +  QL   G++ D   YN ++      +R+     ++ ++T   ++P+ +T   L
Sbjct: 142 DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I A C+  ++  A +M  +M       +  T++ L+ G+ +  ++++A  V  +M E   
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           SP  V+ ++LI+G CK G +E+AL      + +   PD VTY   +   C+ G  + A++
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALK 321

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           + D ML+ G  PD    +T+
Sbjct: 322 VMDLMLQEGHDPDVFTYNTV 341



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 93/189 (49%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EPD +TYNT +   C    +  A+++ + +      P+  T+  +I+   K G +D+A
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + ++M+++G   +  T++ LI        ++ A D+  E+    +SP++ +++ILI+ 
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK G     +  F     +   PD VTY ILI   C  G+   A+ L   M  NG    
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474

Query: 202 GLLLSTLAD 210
            +  +T+ D
Sbjct: 475 TVTYNTIID 483



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 3/192 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A  +   +T  G E D++TY T+I G C   R   A++L   +    ++P   
Sbjct: 557 KQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 616

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN-MKSAFDVYEE 122
            +  +I +  +   + DA  +F +M E G   + +TY  +  G  +    +K AFD   E
Sbjct: 617 AYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVE 676

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      P   S+ +L +GL   G+ +  + A    ++     +    A  IRGY K  +
Sbjct: 677 MVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDVSA--IRGYLKIRK 734

Query: 183 PTEAMQLYDSML 194
             +A+  +  +L
Sbjct: 735 YYDALATFGRLL 746


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 40/250 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A KL  +++++G EPD+++Y T+I     L +++EA +L      ++ +PN
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPN 248

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID---------------- 105
              +  LI+ FC+E ++ +  ++  +M+EKG   NV+TYS +I                 
Sbjct: 249 VSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWA 308

Query: 106 -------------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                              GYF    +  A +++  M E    PN+V+Y+ LI GLC  G
Sbjct: 309 KMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHG 368

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M EA+        N   P+V TY  LI G+ KAG    A ++++ M+ NG +P+ ++ +
Sbjct: 369 KMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYT 428

Query: 207 TLADYNLQSS 216
           ++ +   +SS
Sbjct: 429 SMVNVLCRSS 438



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 106/195 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ AL ++ ++  RG  P++ T+ +++ GY    R+ EA+ ++ ++     +PN + + 
Sbjct: 299 NVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYN 358

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C  G+M +A  + SKM   G   NV TY  LIDG+ K+ ++  A +++ +M  N
Sbjct: 359 TLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V Y+ +++ LC+  +  +A         ++  P+ VT+   I+G C +GR   A
Sbjct: 419 GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECA 478

Query: 187 MQLYDSMLRNGIMPD 201
           + L+  M + G  P+
Sbjct: 479 INLFCQMEQYGCSPN 493



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +     L GQ+ ++G++P++ITY+T+I     +  ++ A+ ++ K+      PN  
Sbjct: 261 REYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVY 320

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT L+  +   GR+ +A  ++++M E+G + NVV Y+ LI G      M  A  V  +M
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM 380

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N  SPN+ +Y  LIDG  K G +  A   ++  + N  +P+VV Y  ++   C++   
Sbjct: 381 ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMF 440

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           ++A  L + M  +   P+ +  +T 
Sbjct: 441 SQAWSLIEKMSTDNCPPNTVTFNTF 465



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 35/234 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL ++ ++ + G EP+++ YNT+I G CS  ++ EAV +  K+      PN  T+  LID
Sbjct: 338 ALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALID 397

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-- 128
            F K G +  A+ +++KM+  G   NVV Y+ +++   +S     A+ + E+M  +N   
Sbjct: 398 GFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPP 457

Query: 129 ---------------------------------SPNIVSYSILIDGLCKRGLMEEALYAF 155
                                            SPNI +Y+ ++DGL K   ++EAL   
Sbjct: 458 NTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELV 517

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
               +  +  ++VTY  +  G+C  G+  EA++L   ML  G+ PD +  +TL 
Sbjct: 518 TEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLT 571



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 97/194 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A +++ ++   G  P+++ Y +++   C  +   +A  L EK++     PN++
Sbjct: 401 KAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTV 460

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF   I   C  GR++ A  +F +M + G   N+ TY+ ++DG  K   +K A ++  EM
Sbjct: 461 TFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  +  N+V+Y+ +  G C  G  EEAL      L   + PD +TY  L   YC  G+ 
Sbjct: 521 EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKV 580

Query: 184 TEAMQLYDSMLRNG 197
             A+QL D +   G
Sbjct: 581 KTAIQLLDKLSAGG 594



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 1/199 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +      A  L  +++     P+ +T+NT I G C   R++ A+ LF ++      P
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+  ++D   KE R+ +A  + ++M EKG + N+VTY+ +  G+      + A  + 
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLL 552

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCK 179
            +M    + P+ ++Y+ L    C +G ++ A+      +     +P+V  Y  L+ G C 
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICN 612

Query: 180 AGRPTEAMQLYDSMLRNGI 198
                EA+   D ML  GI
Sbjct: 613 QIGVEEAVLYLDKMLNEGI 631



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 97/192 (50%), Gaps = 1/192 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+ LF Q+   G  P+I TYN ++ G    NR+ EA++L  ++    ++ N +T+ 
Sbjct: 474 RVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYN 533

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +   FC  G+ ++A  +  KML  G K + +TY+ L   Y     +K+A  + +++   
Sbjct: 534 TIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAG 593

Query: 127 N-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P + +Y+ L+ G+C +  +EEA+      L+  +  +  T+  L+RG   +     
Sbjct: 594 GKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLG 653

Query: 186 AMQLYDSMLRNG 197
            + + D +L +G
Sbjct: 654 PIHILDDILTSG 665



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +EC +D    L  Q+   G+      +  +I  Y  +   ++A+++F ++     +P 
Sbjct: 89  LGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPT 148

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+DA   E R      ++S M   G + NV TY+ L+    K+  +  A  +  
Sbjct: 149 VKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLV 208

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P++VSY+ +I  + K G +EEA       L     P+V  Y  LI G+C+  
Sbjct: 209 EMSNKGCEPDVVSYTTVISSMSKLGKVEEAR-----ELSIRFQPNVSVYNALINGFCREY 263

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  E   L   M+  GI P+ +  ST+
Sbjct: 264 KVKEVFLLLGQMVEKGIDPNVITYSTV 290


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 10/220 (4%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L     +  A  +F  + ++G  PD +TY TII  +  +  ++ A ++ E +    + P
Sbjct: 582 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 641

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +   +  L+D + K  R+D A  ++ +M+  G K N VT++ L+ G FK      AF ++
Sbjct: 642 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 701

Query: 121 EEMCENN-ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +EM E + + P +VSY+ILIDGL K G + EA   F   +D  ++P+  TY  LI    K
Sbjct: 702 KEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761

Query: 180 AGRPTEAMQLYDSMLRNGIMPD---------GLLLSTLAD 210
           AGR  EA +L + M++ G+ PD         GL+ S++ D
Sbjct: 762 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVD 801



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 1/199 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A++LF ++   G EP I++YNT+I G  S++++DEA + F  +     +P+
Sbjct: 30  LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPD 89

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I FT LI  FCK G+     M+ ++ L++  + +V  Y+ +I GY K+ ++ + F + E
Sbjct: 90  VIAFTTLIHGFCKAGQPQVGHMLLNQALKRF-RPDVFLYTSVIHGYCKAGDLDTGFKILE 148

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+  +Y +LID LCK G ++EA   F     +  L D VT+  LI      G
Sbjct: 149 EMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHG 208

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  EA +LY  M+  G  P
Sbjct: 209 KLDEACELYREMIERGYEP 227



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 96/195 (49%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           D+I+Y T+I G     R+DEA +LFEKL      PN + +T +ID   K GR++D    F
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M          TY+ +IDG  K+Q +  A  V+E+M +    P+ ++Y+ LIDG  K 
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
             M+EA       L     P  VTY  ++ G+CK     EA ++   M   G  P   + 
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541

Query: 206 STLADYNLQSSGSQE 220
           ++L  Y L    ++E
Sbjct: 542 TSLLSYYLSKGRAEE 556



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 40/251 (15%)

Query: 6   CHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           C LD    A ++  Q+ +RG EP +  + +++  Y S  R +EA Q+  ++T     P+ 
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 573

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI------------------ 104
           I +T LID     GR+ +A  +F  M+EKG   + +TY  +I                  
Sbjct: 574 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL 633

Query: 105 -----------------DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
                            DGY K + +  AF VY+ M  + I PN V++++L+ GL K G 
Sbjct: 634 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693

Query: 148 MEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + A   F   L+ + + P +V+Y ILI G  KAGR +EA   +  M+  GI+P+    +
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYT 753

Query: 207 TLADYNLQSSG 217
           +L  Y+L  +G
Sbjct: 754 SLI-YSLAKAG 763



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A K+F Q+  +G  PD ITY T+I G+   +++DEA +L + +     +P 
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 502

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  ++  FCK   +++A  + ++M E+G +  +  ++ L+  Y      + A+ V  
Sbjct: 503 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 562

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +P+++ Y+ LID L   G + EA + F   ++    PD +TY  +I+ + K G
Sbjct: 563 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 622

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A ++ + M ++G+ PD    ++L D
Sbjct: 623 NVEAAGEILELMAKSGVGPDCFAYNSLMD 651



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 99/207 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++  LK F  ++     P   TY  +I G C    L +A ++FE++      P+
Sbjct: 408 LLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 467

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT+T LID F K  +MD+A  +   ML KGP+   VTY  ++ G+ K   +  A +V  
Sbjct: 468 TITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIA 527

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    P +  ++ L+     +G  EEA             PDV+ Y  LI      G
Sbjct: 528 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTG 587

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  EA  ++DSM+  G  PD L   T+
Sbjct: 588 RVPEARHVFDSMIEKGCAPDALTYGTI 614



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 101/204 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A +LF +L   G  P+++ Y  +I G     R+++ ++ FE ++     P   T+T
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++ID  CK   + DA  +F +M++KG   + +TY+ LIDG+ K+  M  A  + + M   
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P  V+Y  ++ G CK  ++ EA        +    P +  +  L+  Y   GR  EA
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            Q+   M   G  PD +L ++L D
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLID 581



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 29/248 (11%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A +++  +  + +    + YN+++ GYC L R+D+ ++L  ++      P+
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA---FD 118
             T+ IL+  F +  R+DDA  +F  +   G K N  TY+ +I G + +Q M+ A   FD
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 119 --------------------------VYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                                     ++E++     SPN+V+Y+ +IDGL K G +E+ L
Sbjct: 359 EALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGL 418

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
             F     +  +P   TY ++I G CKA    +A ++++ M++ G +PD +  +TL D  
Sbjct: 419 KNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 478

Query: 213 LQSSGSQE 220
            ++S   E
Sbjct: 479 SKASKMDE 486



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 107/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD   K+  ++   G  PD   Y  +I   C L R+DEA +LFE++       + +
Sbjct: 136 KAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYV 195

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI+A    G++D+A  ++ +M+E+G +  +     LI    K+  +  A ++Y+ +
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV 255

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++ + V+Y+ L+DG CK G +++ L      ++    PD+ TY IL+ G+ +A R 
Sbjct: 256 VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRL 315

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L+  +   G  P+    +T+
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTI 340



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 14/210 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ ALK F         PD+  Y ++I GYC    LD   ++ E++      P++  + +
Sbjct: 113 LNQALKRF--------RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFV 164

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D+A  +F +M + G   + VT+  LI+       +  A ++Y EM E  
Sbjct: 165 LIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P +     LI  LCK G ++EA   +   +   +    V Y  L+ GYCK GR  + +
Sbjct: 225 YEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGL 284

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +L   M+     PD      +  YN+  +G
Sbjct: 285 KLLLQMVECDNFPD------IQTYNILVAG 308



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 1/181 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPN 61
           +K   +D A  ++ ++   G++P+ +T+N ++ G     + D A  LF E L   ++ P 
Sbjct: 654 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPT 713

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++TILID   K GR+ +A   F +M+++G      TY+ LI    K+  +  A  + E
Sbjct: 714 LVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 773

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  ++P++ +YS LI GL    +++ A   F   +     P+ VTY +L RG+  AG
Sbjct: 774 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833

Query: 182 R 182
           R
Sbjct: 834 R 834



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 1/131 (0%)

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           M++A     +M   G   +VV  + +++G  K++ +  A +++ EM      P IVSY+ 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +I GL     M+EA   F+  +DN   PDV+ +  LI G+CKAG+P     L +  L+  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 198 IMPDGLLLSTL 208
             PD  L +++
Sbjct: 120 FRPDVFLYTSV 130



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 37/79 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A KL   +   G+ PD+  Y+ +I G    + +D A  +F+++      PN
Sbjct: 759 LAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 818

Query: 62  SITFTILIDAFCKEGRMDD 80
            +T+ +L   F   GR  D
Sbjct: 819 EVTYKVLRRGFRAAGRALD 837


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A +L  ++   GL P++I+YNT+I GYCS+  LD+A  LF ++      P+
Sbjct: 314 LCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPS 373

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILI  F +       T M  +M  +G   + VTY+ L+D   +S N++ AF +Y 
Sbjct: 374 LATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYS 433

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  +  +I  Y +LI GLC  G M+EA   F    + HL P+ V Y  +I GYCK G
Sbjct: 434 SMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEG 493

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
               A++L   M  NG++P+      +A YN
Sbjct: 494 SSYRALRLLKEMGENGMVPN------VASYN 518



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 115/201 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A +LF ++ +RG+  +++TYNT+I G C   R+ EA +L  ++    L PN I++  
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID +C  G +D A+ +F++M   G   ++ TY+ LI G+ +++N     D+  EM    
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP+ V+Y+IL+D L +   +E+A   +       L+ D+  Y +LI G C  G   EA 
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L+ S+    + P+ ++ +T+
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTM 485



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 1/210 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +LIK    + A ++F + T   ++ D+ ++  +I G C +  LD+  ++  ++  + L P
Sbjct: 139 LLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSP 197

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N + +T LID  CK G ++    +F KM E    AN  TY+ LI+G+FK    K   ++Y
Sbjct: 198 NVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELY 257

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E+M    I PN+ +Y+ +I   C  G +  A   F    +  +  +VVTY  LI G C+ 
Sbjct: 258 EKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQE 317

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            R  EA +L   M R+G+ P+ +  +TL D
Sbjct: 318 RRVLEAERLMCRMKRDGLSPNLISYNTLID 347



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 39/254 (15%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           ++IK C    +LD   ++ GQ+ + GL P+++ Y T+I G C    ++   QLF K+  +
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228

Query: 57  QLKPNSITFTILIDAF-----------------------------------CKEGRMDDA 81
            +  N  T+T+LI+ F                                   C +G++++A
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 288

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M E+G   NVVTY+ LI G  + + +  A  +   M  + +SPN++SY+ LIDG
Sbjct: 289 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDG 348

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C  G +++A   F+    +   P + TY ILI G+ +A        +   M   G+ P 
Sbjct: 349 YCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 408

Query: 202 GLLLSTLADYNLQS 215
            +  + L D  ++S
Sbjct: 409 KVTYTILMDALVRS 422



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A  LF Q+   G  P + TYN +I G+           +  ++    L P+ +T+T
Sbjct: 354 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 413

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+DA  +   ++ A  ++S M + G  A++  Y  LI G     +MK A  +++ + E 
Sbjct: 414 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 473

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           ++ PN V Y+ +I G CK G    AL       +N ++P+V +Y   I+  CK  + TEA
Sbjct: 474 HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEA 533

Query: 187 MQLYDSMLRNGIMPD 201
             L   M+  G+ P 
Sbjct: 534 EVLLKDMIELGLKPS 548



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 4/191 (2%)

Query: 14  LFGQLTDRGLEP---DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           LF +LT   L+     ++ +  II  +      ++A+  F ++    L P S TF  L+ 
Sbjct: 79  LFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLI 138

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K    + A  +F++  +   K +V ++  +I G  +   +   F+V  +M E  +SP
Sbjct: 139 LLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSP 197

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ LIDG CK G +E     F+   +  ++ +  TY +LI G+ K G   + ++LY
Sbjct: 198 NVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELY 257

Query: 191 DSMLRNGIMPD 201
           + M   GI+P+
Sbjct: 258 EKMKLTGIVPN 268



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 71/137 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++  +++ A +++  +   GL  DI  Y  +I G C +  + EA +LF+ L  + LKPN
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 478

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  +I  +CKEG    A  +  +M E G   NV +Y+  I    K +    A  + +
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538

Query: 122 EMCENNISPNIVSYSIL 138
           +M E  + P+I  ++++
Sbjct: 539 DMIELGLKPSISIWNMI 555



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A KLF  L +  L+P+ + YNT+I GYC       A++L +++    + PN  ++  
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            I   CK+ +  +A ++   M+E G K ++  ++ +    F
Sbjct: 520 TIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARF 560


>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFT 66
           L+ A ++  ++ D GL P+++T+N++I GYC    L  A+++ + +     + PN +TF 
Sbjct: 236 LNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFN 295

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+ FCKEG++ +A  +FS+M       NVVTY+ LI+G+ ++ N +    ++EEM  N
Sbjct: 296 TLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERN 355

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  +I++Y+ LI GLCK G  ++A Y        +L+P+  T++ LI G C       A
Sbjct: 356 KVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERA 415

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +Y SM+R+G  P+      LA 
Sbjct: 416 FLVYRSMVRSGFSPNENTFRMLAS 439



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 107/201 (53%), Gaps = 1/201 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +  +  + Q+    + P++ T N ++  YC L  L++A ++ EK+  + L PN +TF  L
Sbjct: 202 ELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSL 261

Query: 69  IDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           I  +C +G +  A  +   M+ K G   NVVT++ LI+G+ K   +  A  V+ EM   N
Sbjct: 262 ISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLAN 321

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ++PN+V+Y+ LI+G  + G  E  +  F     N +  D++TY  LI G CK G+  +A 
Sbjct: 322 VAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAA 381

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            +   + +  ++P+    S L
Sbjct: 382 YMVKELDKGNLVPNASTFSAL 402



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 98/185 (52%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+ P+++T+NT+I G+C   +L EA ++F ++    + PN +T+  LI+ F + G  +  
Sbjct: 286 GVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMG 345

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F +M     KA+++TY+ LI G  K    K A  + +E+ + N+ PN  ++S LI G
Sbjct: 346 IGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAG 405

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C R   E A   +   + +   P+  T+ +L   +CK      A+Q+   ML   + PD
Sbjct: 406 QCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPD 465

Query: 202 GLLLS 206
             +LS
Sbjct: 466 SSILS 470



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 1/197 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A   F ++ + G  P + + N  +     L R +  V  + ++   ++ PN  T  +
Sbjct: 166 LRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINM 225

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE-EMCEN 126
           ++ A+CK G ++ A+ +  KM + G   NVVT++ LI GY     +  A  V +  M +N
Sbjct: 226 VVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKN 285

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V+++ LI+G CK G + EA   F      ++ P+VVTY  LI G+ +AG     
Sbjct: 286 GVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMG 345

Query: 187 MQLYDSMLRNGIMPDGL 203
           + L++ M RN +  D L
Sbjct: 346 IGLFEEMERNKVKADIL 362



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 95/200 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A ++F ++    + P+++TYNT+I G+      +  + LFE++   ++K + +
Sbjct: 303 KEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADIL 362

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI   CKEG+   A  M  ++ +     N  T+S LI G     N + AF VY  M
Sbjct: 363 TYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSM 422

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  SPN  ++ +L    CK    + A+      L+  + PD    + +  G C+ GR 
Sbjct: 423 VRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRK 482

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ L   +    ++P G 
Sbjct: 483 QFALMLCSEIEAKRLLPQGF 502



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 1/193 (0%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + ++T+   +  +N+L  A   F K+      P   +    + +     R +     + +
Sbjct: 151 LVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQ 210

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M       NV T + ++  Y K   +  A +V E+M +  + PN+V+++ LI G C +GL
Sbjct: 211 MRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGL 270

Query: 148 MEEALYAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
           +  AL      +  N + P+VVT+  LI G+CK G+  EA +++  M    + P+ +  +
Sbjct: 271 LGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYN 330

Query: 207 TLADYNLQSSGSQ 219
           TL +   Q+  S+
Sbjct: 331 TLINGFGQAGNSE 343



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A  +  +L    L P+  T++ +I G C  N  + A  ++  +      PN
Sbjct: 371 LCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPN 430

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK 91
             TF +L  AFCK    D A  +   MLE+
Sbjct: 431 ENTFRMLASAFCKNEDFDGAVQVLRDMLER 460


>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
          Length = 571

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++  +CS     +D+AV++F  +     K
Sbjct: 148 LVAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIP----K 203

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P++ ++  +ID  C+ GR+ +A  +F++M+  G    VVTY+ LI    +      A  +
Sbjct: 204 PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKL 263

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    I PN+V+YS LIDGLCK G    A+      +    LP+ +TY+ +I G CK
Sbjct: 264 FDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCK 323

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   +AM++ D M   G  PD  L   L
Sbjct: 324 EGCLGQAMEILDRMRLQGRKPDAGLFGKL 352



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 101/199 (50%), Gaps = 4/199 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++F  +     +PD  +YNT+I G C   RL EA  LF ++      P  +T+T 
Sbjct: 191 IDDAVRVFRNIP----KPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTT 246

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    +E   DDA  +F +M  +G   NVVTYS LIDG  K     SA ++ + M +  
Sbjct: 247 LIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKER 306

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN ++YS +IDGLCK G + +A+            PD   +  LI G C AGR  EA 
Sbjct: 307 KLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEAS 366

Query: 188 QLYDSMLRNGIMPDGLLLS 206
              D M   GI P+ L  S
Sbjct: 367 NYLDEMNFAGIRPNRLTWS 385



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 10  AALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AAL LF       GL     +Y  ++    + + L  A  L   +      P + T+ +L
Sbjct: 120 AALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVL 179

Query: 69  IDAFCKEGR--MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + A C +    +DDA  +F  +    PK +  +Y+ +IDG  +   +  A D++ EM  N
Sbjct: 180 VKAHCSDAAVPIDDAVRVFRNI----PKPDACSYNTVIDGLCRRGRLPEARDLFAEMIAN 235

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P +V+Y+ LI  L +    ++AL  F       ++P+VVTY+ LI G CK GR   A
Sbjct: 236 GTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASA 295

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++L D M++   +P+ +  S++ D
Sbjct: 296 VELLDRMVKERKLPNTITYSSVID 319



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L +E   D ALKLF ++  RG+ P+++TY+++I G C   R   AV+L +++   +  P
Sbjct: 250 WLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLP 309

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+IT++ +ID  CKEG +  A  +  +M  +G K +   +  LI G   +     A +  
Sbjct: 310 NTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYL 369

Query: 121 EEMCENNISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           +EM    I PN +++S+       ++  LC +G +  A   +       +     T+ +L
Sbjct: 370 DEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLL 429

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMP-----DGLLLSTLADYNLQSSGS-QEH 221
           +    K     +A  +   ML    +P     D ++ +  +   L++ GS QE+
Sbjct: 430 VECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKKKLRAVGSVQEY 483


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 6/215 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H      L+ ++   GL P+  T N +I   C++NR+ E +     +      P+
Sbjct: 101 LAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPD 160

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI   C E R+ +AT +F +M + G   NVVTY  LI G  ++ N+  A  +++
Sbjct: 161 VVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQ 220

Query: 122 EMCEN------NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           EM         N  PNI SY+I+ID LCK G  +EA   F+  +D  + PDVVT++ LI 
Sbjct: 221 EMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALID 280

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             CK G   EA +  ++M+  GI+PD    ++L +
Sbjct: 281 TLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIE 315



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------CVQL 58
           E  +  A +LF ++   G  P+++TY T+I G C    ++ A++L +++        +  
Sbjct: 174 EHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINC 233

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           KPN  ++ I+ID  CK G+  +A  +F++M+++G + +VVT+S LID   K   +  A  
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
             E M    I P++ +++ LI+G C  G ++ A   F         PDV++Y +LI GYC
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           K     EAM+LY+ MLR G  PD
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPD 376



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 108/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD+A +LF  +  +G EPD+I+Y  +I GYC    ++EA++L+ ++  V   P+  TF +
Sbjct: 323 LDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCV 382

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G++ DA  +F  +       N+   S  +DG  K+  +  A +++ E+   N
Sbjct: 383 LLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYN 442

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I S++ LIDGLCK   +E A   F       L PDVVTY I+I G+CK G+   A 
Sbjct: 443 MKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNAN 502

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L+  M  NG  P+ L  S L
Sbjct: 503 ILFQMMEENGCTPNLLTYSAL 523



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 20/211 (9%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P+I +YN II   C + +  EA +LF ++    ++P+ +TF+ LID  CKEG + +A  
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
               M+ +G   ++ T++ LI+G+    ++ SA +++  M      P+++SY++LI G C
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY------------- 190
           K   +EEA+  ++  L     PD+ T+ +L++G   AG+  +A +L+             
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413

Query: 191 ------DSMLRNGIMPDGL-LLSTLADYNLQ 214
                 D + +NG + + + L + L  YN++
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMK 444



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 18/197 (9%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
            II++N ++     +    +   L++K+    L PN  T  ILI+  C   R+ +     
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
           + ++ +G   +VVTY+ LI G      +  A  ++  M +    PN+V+Y  LI GLC+ 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 146 GLMEEAL------------YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           G +  AL            YA +C       P++ +Y I+I   CK G+  EA +L++ M
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCK------PNIFSYNIIIDELCKIGKWKEAKRLFNEM 263

Query: 194 LRNGIMPDGLLLSTLAD 210
           +  G+ PD +  S L D
Sbjct: 264 VDQGVRPDVVTFSALID 280



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 84/134 (62%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++LF +L    ++ DI ++N +I G C   +L+ A +LFEKL+   L+P+ +T+ I+I+
Sbjct: 431 AMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMIN 490

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G++D+A ++F  M E G   N++TYS L+ G++K+  ++    +  +M + ++S 
Sbjct: 491 GFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSL 550

Query: 131 NIVSYSILIDGLCK 144
               Y+I+ D + K
Sbjct: 551 AASIYTIVEDMVSK 564



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)

Query: 73  CKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           CK+G +    A   F  M+      ++++++ L+    K ++    F +Y++M    +SP
Sbjct: 70  CKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  + +ILI+ LC    + E L A    +    +PDVVTY  LI+G C   R +EA +L+
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M + G  P+ +   TL
Sbjct: 185 IRMQKLGCWPNVVTYGTL 202



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 63/121 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A +LF +L+  GL+PD++TY  +I G+C   ++D A  LF+ +      PN
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ L+  F K  ++++   +  KM++K        Y+ + D   K +  +   D+ +
Sbjct: 517 LLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576

Query: 122 E 122
            
Sbjct: 577 R 577


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 123/244 (50%), Gaps = 35/244 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F ++    +EPDI+TYN +  G+C    + E   L +++    L+PNS+T+ I I 
Sbjct: 159 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 218

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ------------------- 111
            FC+ G + +A ++F+ + EKG     V YS ++ GY  S                    
Sbjct: 219 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 278

Query: 112 ----------------NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
                           N++ A +V + M E+N+ P+++SYS LI   C+ G M++A   F
Sbjct: 279 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWF 338

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           H  +   L  DV+ Y IL+ GYCKAGR  EA QL+  M   GI PD +  + L D +L+ 
Sbjct: 339 HDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 398

Query: 216 SGSQ 219
           +  Q
Sbjct: 399 TLQQ 402



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 44/254 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KL      +G  PD+  Y+ +I  YC +  L +AV  +E +    ++ N
Sbjct: 10  LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETN 69

Query: 62  -----------------------------------SITFTILIDAFCKEGRMDDATMMFS 86
                                               + + I +D +CK G M++A  + +
Sbjct: 70  CHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 129

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M   G   + + Y+CLI+GY     M++A  V+EEM + NI P+IV+Y+IL  G CK G
Sbjct: 130 EMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 189

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI-------- 198
           L+ E         D  L P+ +TY I I G+C+ G  +EA  L++ +   GI        
Sbjct: 190 LVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 249

Query: 199 -MPDGLLLSTLADY 211
            M  G LLS   D+
Sbjct: 250 SMVCGYLLSGWTDH 263



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + +  + PD+I+Y+ +I  YC    +D+A   F  +    L  + I +TIL++ +CK GR
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE--------------- 122
           + +A  +F +M   G K +V+ Y+ L+DG+ K    +    + +E               
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425

Query: 123 -MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I P++  Y++LIDG CK   + EA   F   L   L PD   Y  LI GYC  G
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLS--TLADYNLQSSGSQEH 221
             ++A  L   M+  GI PD L  S   +AD  L     +E+
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFSEVNIADEELSVKIRKEN 527



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 101/194 (52%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F +  D GL  D + YN  +  YC    ++EAV+L  ++ C  L P+ I +T LI+ +C 
Sbjct: 93  FLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCL 152

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           +G M +A  +F +ML+   + ++VTY+ L  G+ KS  +   FD+ + M +  + PN ++
Sbjct: 153 KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLT 212

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y I I G C+ G + EA   F+   +  +    V Y+ ++ GY  +G    A  L+  + 
Sbjct: 213 YGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVA 272

Query: 195 RNGIMPDGLLLSTL 208
           R G + D    S L
Sbjct: 273 RQGNLVDHFSCSKL 286



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 51/253 (20%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------EKLTCV 56
           +L  A  LF  + ++G++   + Y++++CGY      D A  LF          +  +C 
Sbjct: 225 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCS 284

Query: 57  QL-------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +L                          P+ I+++ LI  +C+ G MD A + F  M+++
Sbjct: 285 KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 344

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK------- 144
           G   +V+ Y+ L++GY K+  ++ A  ++ +M    I P++++Y++L+DG  K       
Sbjct: 345 GLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGW 404

Query: 145 RGLMEEA----LYAFHCAL-----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            G+ +E     L A H  L     D  + PDV  Y +LI G CKA    EA +L+D ML+
Sbjct: 405 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 464

Query: 196 NGIMPDGLLLSTL 208
            G+ PD    + L
Sbjct: 465 KGLTPDAYAYTAL 477



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 6/190 (3%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + YN ++ G C   RLDEA +L E        P+   ++ LI ++CK G +  A   +  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+  G + N    S L+  + K          + +  ++ +  + V Y+I +D  CK G 
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M EA+   +      L PD + Y  LI GYC  G    A Q+++ ML+  I PD      
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPD------ 174

Query: 208 LADYNLQSSG 217
           +  YN+ +SG
Sbjct: 175 IVTYNILASG 184



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 16/149 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC--SLNRLDEAV-------------- 47
           K   L  A +LF Q+T+ G++PD+I Y  ++ G+   +L +  E +              
Sbjct: 362 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN 421

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +L   +  +Q++P+   +T+LID  CK   + +A  +F +ML+KG   +   Y+ LI+GY
Sbjct: 422 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 481

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYS 136
                +  A D+ +EM +  I P+ +++S
Sbjct: 482 CSQGEISKAEDLLQEMIDKGIEPDELTFS 510


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MDDA  +F +ML KG   N VT++ LI G+ K+  +  A ++Y+ M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXM 273

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD----NHLLPDVVTYAILIRGYCK 179
              ++ P++++Y+ LI GLCK+G +++A    H  +D      L PD  TY  LI G CK
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQA----HXLIDEMSMKGLKPDKFTYTTLIDGCCK 329

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G    A +    M++  I  D +  + L
Sbjct: 330 EGDLDTAFKHRKRMIQGNIRLDDVAYTAL 358



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 110/199 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   LD   +L   +   G++PD+ TY+ +I G C  +++D+A +LF+++    L PN 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNG 247

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TFT LI   CK GR+D A  ++  ML +    +++TY+ LI G  K  ++K A  + +E
Sbjct: 248 VTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDE 307

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + P+  +Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGR 367

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             +A ++   ML  G+ PD
Sbjct: 368 SVDAEKMLREMLSVGLKPD 386



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++ +    L P+
Sbjct: 222 LCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPD 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A  +  +M  KG K +  TY+ LIDG  K  ++ +AF   +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRK 341

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L   L PD+ TY ++I  +CK G
Sbjct: 342 RMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 401

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +  +L   M RNG +P      ++  YN+  +G
Sbjct: 402 DVWKGSKLLKEMQRNGHVP------SVVTYNVLMNG 431



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 117 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V TYS LI+G  K   M  A ++++
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 236

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + PN V+++ LI G CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 237 EMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKG 296

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD    +TL D
Sbjct: 297 DLKQAHXLIDEMSMKGLKPDKFTYTTLID 325



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 65/146 (44%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F+ LI A+ + G + DA   +    E        T   +++   K +  K  +  YEE+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL 134

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G   
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           E  +L  +ML +G+ PD    S L +
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLIN 220


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 113/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +AA  LF ++T+R +E D+ +YNT++   C   ++D A ++  ++   ++ PN ++++ 
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID F K GR D+A  +F +M   G   + V+Y+ L+  Y K    + A D+  EM    
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++V+Y+ L+ G  K+G  +E    F      H+LP+++TY+ LI GY K G   EAM
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +++      G+  D +L S L D
Sbjct: 535 EIFREFKSAGLRADVVLYSALID 557



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A ++  Q+  + + P++++Y+T+I G+    R DEA+ LF ++  + +  + +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+  + K GR ++A  +  +M   G K +VVTY+ L+ GY K         V+ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ PN+++YS LIDG  K GL +EA+  F       L  DVV Y+ LI   CK G  
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+ L D M + GI P+ +  +++ D
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIID 592



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 98/177 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D AL LFG++   G+  D ++YNT++  Y  + R +EA+ +  ++  V +K + +
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  + K+G+ D+   +F++M  +    N++TYS LIDGY K    K A +++ E 
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
               +  ++V YS LID LCK GL+  A+          + P+VVTY  +I  + ++
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 38/239 (15%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + A+ +F  + + GL P+++TYN +I  CG   +    +  + F+++    ++P+ ITF 
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME-FKQVAKFFDEMQRNGVQPDRITFN 343

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+    + G  + A  +F +M  +  + +V +Y+ L+D   K   M  AF++  +M   
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF------HCALD----NHLLP----------- 165
            I PN+VSYS +IDG  K G  +EAL  F        ALD    N LL            
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463

Query: 166 --------------DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                         DVVTY  L+ GY K G+  E  +++  M R  ++P+ L  STL D
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 82/143 (57%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL +  ++   G++ D++TYN ++ GY    + DE  ++F ++    + PN +T++ L
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID + K G   +A  +F +    G +A+VV YS LID   K+  + SA  + +EM +  I
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580

Query: 129 SPNIVSYSILIDGLCKRGLMEEA 151
           SPN+V+Y+ +ID   +   M+ +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRS 603



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 3/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F      G    +  ++ +I  Y      +EA+ +F  +    L+PN +T+  +ID
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311

Query: 71  AFCKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           A C +G M+       F +M   G + + +T++ L+    +    ++A ++++EM    I
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++ SY+ L+D +CK G M+ A           ++P+VV+Y+ +I G+ KAGR  EA+ 
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+  M   GI  D +  +TL
Sbjct: 431 LFGEMRYLGIALDRVSYNTL 450



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 64/115 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D   K+F ++    + P+++TY+T+I GY       EA+++F +     L+ + +
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            ++ LIDA CK G +  A  +  +M ++G   NVVTY+ +ID + +S  M  + D
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 5/182 (2%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT--FTILIDAFCKEGRMDDATMMFSKMLE 90
           II    + N  D+AV  +E     + + N      + +I    + G++  A  +F     
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
            G    V  +S LI  Y +S   + A  V+  M E  + PN+V+Y+ +ID  C +G ME 
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEF 320

Query: 151 ALYA--FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              A  F     N + PD +T+  L+    + G    A  L+D M    I  D    +TL
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380

Query: 209 AD 210
            D
Sbjct: 381 LD 382


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 105/187 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ L   +   G+  D++TY T+I G C    +D+AV+L  ++    ++PN + ++ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  +CK GR +D   +F +M EKG + +VV Y+ LID   K    K A  V + M    +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+Y++LI+ +CK G ++EA+       +  + PDVVTY  LI+G        EAM 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 189 LYDSMLR 195
           L + M+R
Sbjct: 312 LLEEMVR 318



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 123/214 (57%), Gaps = 8/214 (3%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
             +D A++L G++ + G+EP+++ Y++++ GYC   R ++  ++F +++   ++P+ + +
Sbjct: 164 AEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMY 223

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T LID+ CK G+   A  +   M+ +G + NVVTY+ LI+   K  ++K A  V ++M E
Sbjct: 224 TGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSE 283

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRP 183
             ++P++V+Y+ LI GL     M+EA++     +   N + P+VVT+  +I+G C  GR 
Sbjct: 284 KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRM 343

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +A Q+   M   G M +      L  YNL   G
Sbjct: 344 RQAFQVRAMMEETGCMVN------LVTYNLLIGG 371



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 39/254 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPN 61
           KE  +  A+ +  +++++G+ PD++TYNT+I G   +  +DEA+ L E++   +  +KPN
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +I   C  GRM  A  + + M E G   N+VTY+ LI G  +   ++ A ++ +
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 122 EMCENNISPNIVSYSILIDGLCK-----------------------------------RG 146
           EM    + P+  +YSILI G CK                                   +G
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
           +ME A   F+  +DN+   DVV Y+ +I G CKAG    A +L  S++  G+ PD +  S
Sbjct: 447 MMERARNLFN-EMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505

Query: 207 TLADYNLQSSGSQE 220
            + +     SG  E
Sbjct: 506 IVINM-FAKSGDME 518



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 2/198 (1%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F +++++G+EPD++ Y  +I   C + +  +A  + + +    L+PN +T+ +LI+  
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--ENNISP 130
           CKEG + +A  +  KM EKG   +VVTY+ LI G      M  A  + EEM   +N + P
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+++ +I GLC  G M +A        +   + ++VTY +LI G  +  +  +AM+L 
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELM 385

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M   G+ PD    S L
Sbjct: 386 DEMTSLGLEPDSFTYSIL 403



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 3/179 (1%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITFTILIDAFCKEGRMDDAT 82
           D ++YNT++   C     D A  L   ++       +PN++++T+L+ A C +   D A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +   M   G +A+VVTY  LI G   +  +  A ++  EMCE+ I PN+V YS L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           CK G  E+    F    +  + PDVV Y  LI   CK G+  +A  + D M+R G+ P+
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 94/185 (50%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P+ ++Y  ++   C+    D+AV L   +    ++ + +T+  LI   C    +D A  
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M E G + NVV YS L+ GY KS   +    V+ EM E  I P++V Y+ LID LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  ++A       +   L P+VVTY +LI   CK G   EA+ +   M   G+ PD +
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 204 LLSTL 208
             +TL
Sbjct: 292 TYNTL 296



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A++L  ++T  GLEPD  TY+ +I G+C + ++D A  L   +    ++P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+ A C++G M+ A  +F++M    P  +VV YS +I G  K+ ++K+A ++ +
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + +  ++P+ V+YSI+I+   K G ME A         +  LPDV  +  LI+GY   G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              + ++L   M+   I  D  ++STL+
Sbjct: 551 EINKVLELIREMITKNIALDSKIISTLS 578



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 113/202 (55%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A ++   + + G   +++TYN +I G   ++++ +A++L +++T + L+P+S T++
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI  FCK  ++D A  + S M ++G +  +  Y  L+    +   M+ A +++ EM +N
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DN 460

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N   ++V+YS +I G CK G ++ A       +D  L PD VTY+I+I  + K+G    A
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAA 520

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             +   M  +G +PD  +  +L
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSL 542



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 6/171 (3%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM-LEKGP--KANVVT 99
           L EA  L + L  V+   +++++  ++ A C+ G  D A  +   M LE  P  + N V+
Sbjct: 61  LGEATSLLDALPSVR---DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y+ L+      +    A  +   M    +  ++V+Y  LI GLC    +++A+       
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ + P+VV Y+ L++GYCK+GR  +  +++  M   GI PD ++ + L D
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 116/197 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+ + G  PD+ITY T+I G+C    +DEAV L + +     KPN+I++TI
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C   R  DA  + S+M+++G   N VT++ +I+   K   ++ A ++ ++M  N 
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+++SYS +IDGL K G  EEAL   +  ++  + P+V+TY+ +     + GR  + +
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVI 531

Query: 188 QLYDSMLRNGIMPDGLL 204
           Q++D++    I  D +L
Sbjct: 532 QMFDNIQDATIRSDAVL 548



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 125/241 (51%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--------------------- 42
           KE H + A ++  ++   GL+P+++ YNT++ G CS +R                     
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337

Query: 43  --------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                         +D  ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N ++Y+ ++ G   ++    A ++   M +    PN V+++ +I+ LCK+GL+
Sbjct: 398 PSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLV 457

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ +  S++
Sbjct: 458 EQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSM 517

Query: 209 A 209
           A
Sbjct: 518 A 518



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 10/204 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-------LDEAVQLFEKLTCVQ--- 57
           +D  L++  +L   G E DI++YN ++ G C+  R       +DE V++ E L+ +    
Sbjct: 202 VDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHG 261

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             P+   +  +ID  CKEG  + A  + S+M   G K NVV Y+ ++ G   +   + A 
Sbjct: 262 CTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAE 321

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           ++  EM + N   + V+++IL+D  C+ GL++  +      L++  +PDV+TY  +I G+
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK G   EA+ L  +M   G  P+
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPN 405



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 92/183 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++  +G  P+ +T+NTII   C    +++A++L +++      P+ I+++ +ID
Sbjct: 425 AEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVID 484

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G+ ++A  + + M+ KG   NV+TYS +     +   +     +++ + +  I  
Sbjct: 485 GLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRS 544

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + V Y+ +I  LCKR   + A+      + N  +P+  TY  LI+G    G   EA  L 
Sbjct: 545 DAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLL 604

Query: 191 DSM 193
             +
Sbjct: 605 SEL 607



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN
Sbjct: 451 LCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ +  A  +EGR+D    MF  + +   +++ V Y+ +I    K +    A D   
Sbjct: 511 VITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLA 570

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  N   PN  +Y+ LI GL   GL+ EA
Sbjct: 571 YMVSNGCMPNESTYTALIKGLASEGLLCEA 600



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 109/254 (42%), Gaps = 48/254 (18%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKP--- 60
            ++AA +L   +    + P+  TY  ++ G C   R+ +A+ + +++T   CV + P   
Sbjct: 99  QVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYH 155

Query: 61  -----------------------------NSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                                        ++    ++I+A C +G +D+   M  K+   
Sbjct: 156 VIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLF 215

Query: 92  GPKANVVTYSCLIDGYFKSQN----------MKSAFDVYEEMCENNISPNIVSYSILIDG 141
           G +A++V+Y+ ++ G   ++           M    +   +M ++  +P+I  Y+ +IDG
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +CK G  E A           L P+VV Y  +++G C A R  +A +L   M +     D
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335

Query: 202 GLLLSTLADYNLQS 215
            +  + L D+  Q+
Sbjct: 336 DVTFNILVDFFCQN 349



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 13/194 (6%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN ++ GYC + +++ A +L      V + PN+ T+  ++   C  GR+ DA  +  
Sbjct: 84  VVDYNAMVAGYCRVGQVEAARRLA---AAVPVPPNAYTYFPVVRGLCGRGRIADALAVLD 140

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  +        Y  +I+   +S    SA  V E +     + +  + +++I+ +C +G
Sbjct: 141 EMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQG 200

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR----------N 196
            ++E L             D+V+Y  +++G C A R  +  +L D M++          +
Sbjct: 201 CVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH 260

Query: 197 GIMPDGLLLSTLAD 210
           G  PD  + +T+ D
Sbjct: 261 GCTPDIRMYATIID 274



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 62/123 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL+L   + ++G+ P++ITY+++        R+D+ +Q+F+ +    ++ +
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSD 545

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  +I + CK    D A    + M+  G   N  TY+ LI G      +  A D+  
Sbjct: 546 AVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLS 605

Query: 122 EMC 124
           E+C
Sbjct: 606 ELC 608



 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 40/90 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +D  +++F  + D  +  D + YN +I   C     D A+     +      PN
Sbjct: 521 LAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPN 580

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK 91
             T+T LI     EG + +A  + S++  +
Sbjct: 581 ESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +V Y+ ++ G C+ G +E A      A    + P+  TY  ++RG C  GR  +A+ + 
Sbjct: 83  GVVDYNAMVAGYCRVGQVEAA---RRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVL 139

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
           D M     +P   +   + +   +S G
Sbjct: 140 DEMTSRSCVPIPPMYHVIIESACRSGG 166


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 110/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A +L  ++  +GL+P ++TY ++I G   ++RLDEA  LFE+     +  N +
Sbjct: 633 KSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID F K GR+D+A ++  ++++KG   N  T++CL+D   K++ +  A   ++ M
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN V+YSI+++GLCK     +A   +       L P+ +TY  +I G  + G  
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  L++    +G +PD
Sbjct: 813 LEAKDLFERFKSSGGIPD 830



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 111/196 (56%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KLF ++ ++GL  D   YN +I G+C   ++++A QL E++    L+P  +T+  +ID  
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K  R+D+A M+F +   K    NVV YS LIDG+ K   +  A+ + EE+ +  ++PN 
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT 726

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +++ L+D L K   ++EAL  F    +    P+ VTY+I++ G CK  +  +A   +  
Sbjct: 727 YTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQE 786

Query: 193 MLRNGIMPDGLLLSTL 208
           M + G+ P+ +  +T+
Sbjct: 787 MQKQGLKPNTITYTTM 802



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 35/245 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K   L+AALK+   + + GL P+IIT N +I   C   RLDEA  +F  L      P
Sbjct: 420 MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP 479

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S+TF  LID   + G+++DA M++ KML+ G   N V Y+ LI  +FK    +    +Y
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539

Query: 121 EEMCE----------NN-------------------------ISPNIVSYSILIDGLCKR 145
           +EM            NN                         ++P++ SYSILI GL K 
Sbjct: 540 KEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKG 599

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G  ++    F+   +  L  D   Y I+I G+CK+G+  +A QL + M   G+ P  +  
Sbjct: 600 GFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTY 659

Query: 206 STLAD 210
            ++ D
Sbjct: 660 GSVID 664



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 34/244 (13%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEK-------- 52
           +L K   +D A++LF +L      P +  YNT+I GY S+ + +EA  L E+        
Sbjct: 316 VLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIP 375

Query: 53  --------LTCVQLK------------------PNSITFTILIDAFCKEGRMDDATMMFS 86
                   LTC+  K                  PN  ++ ILID  CK G ++ A  +  
Sbjct: 376 SVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQD 435

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M E G   N++T + +ID   K+Q +  A  ++  +     +P+ V++  LIDGL + G
Sbjct: 436 SMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHG 495

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + +A   +   LD+   P+ V Y  LIR + K GR  +  ++Y  M+  G  PD +LL+
Sbjct: 496 KVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLN 555

Query: 207 TLAD 210
              D
Sbjct: 556 NYMD 559



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K++ ++  RG  PD++  N  +        +++   LFE++    L P+  +++ILI   
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K G   D   +F +M E+G   +   Y+ +IDG+ KS  +  A+ + EEM    + P +
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y  +IDGL K   ++EA   F  A    +  +VV Y+ LI G+ K GR  EA  + + 
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716

Query: 193 MLRNGIMPDGLLLSTLAD 210
           +++ G+ P+    + L D
Sbjct: 717 LMQKGLTPNTYTWNCLLD 734



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 1/222 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +  +E  +DAAL L  ++       D++ YN  I  +  + ++D A + F +L    L P
Sbjct: 246 VFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP 305

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +TFT +I   CK  R+D+A  +F ++        V  Y+ +I GY        A+ + 
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E        P++++Y+ ++  L ++G +EEAL     A+     P++ +Y ILI   CKA
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE-AMKMDAAPNLTSYNILIDMLCKA 424

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           G    A+++ DSM   G+ P+ + ++ + D   ++    E C
Sbjct: 425 GELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 88/199 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   L  A  +   +      P    Y T+I    + +  D  + L  ++  +  +  
Sbjct: 177 FVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVT 236

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT LI  F +EGR+D A  +  +M      A++V Y+  ID + K   +  A+  + 
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    + P+ V+++ +I  LCK   ++EA+  F     N  +P V  Y  +I GY   G
Sbjct: 297 ELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVG 356

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +  EA  L +   R G +P
Sbjct: 357 KFNEAYSLLERQKRKGCIP 375



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++  +++  G  P   T   ++  +    +L EA  + E +   + +P    +T LI A 
Sbjct: 153 QILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGAL 212

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
                 D    +  +M E G +  V  ++ LI  + +   + +A  + +EM  N+ + ++
Sbjct: 213 SAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADL 272

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V Y++ ID   K G ++ A   FH      L+PD VT+  +I   CKA R  EA++L++ 
Sbjct: 273 VLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEE 332

Query: 193 MLRNGIMP 200
           +  N  +P
Sbjct: 333 LDSNKSVP 340



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A   + ++  +GL+P+ ITY T+I G   +  + EA  LFE+       P+
Sbjct: 771 LCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPD 830

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
           S  +  +I+      +  DA ++F +   KG +    T   L+D   K+  ++ A
Sbjct: 831 SACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score = 43.5 bits (101), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 32/180 (17%), Positives = 73/180 (40%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
            YN ++        L+   Q+ E+++     P++ T   ++ +F K  ++ +A  +   M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            +   +     Y+ LI     +        +  +M E      +  ++ LI    + G +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + AL        N    D+V Y + I  + K G+   A + +  +   G++PD +  +++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 105/187 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ L   +   G+  D++TY T+I G C    +D+AV+L  ++    ++PN + ++ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  +CK GR +D   +F +M EKG + +VV Y+ LID   K    K A  V + M    +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+Y++LI+ +CK G ++EA+       +  + PDVVTY  LI+G        EAM 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 189 LYDSMLR 195
           L + M+R
Sbjct: 312 LLEEMVR 318



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 123/214 (57%), Gaps = 8/214 (3%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
             +D A++L G++ + G+EP+++ Y++++ GYC   R ++  ++F +++   ++P+ + +
Sbjct: 164 AEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMY 223

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T LID+ CK G+   A  +   M+ +G + NVVTY+ LI+   K  ++K A  V ++M E
Sbjct: 224 TGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSE 283

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL--DNHLLPDVVTYAILIRGYCKAGRP 183
             ++P++V+Y+ LI GL     M+EA++     +   N + P+VVT+  +I+G C  GR 
Sbjct: 284 KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRM 343

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +A Q+   M   G M +      L  YNL   G
Sbjct: 344 RQAFQVRAMMEETGCMVN------LVTYNLLIGG 371



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 38/242 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPN 61
           KE  +  A+ +  +++++G+ PD++TYNT+I G   +  +DEA+ L E++   +  +KPN
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  +I   C  GRM  A  + + M E G   N+VTY+ LI G  +   ++ A ++ +
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 122 EMCENNISPNIVSYSILIDGLCK-----------------------------------RG 146
           EM    + P+  +YSILI G CK                                   +G
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
           +ME A   F+  +DN+   DVV Y+ +I G CKAG    A +L  S++  G+ PD +  S
Sbjct: 447 MMERARNLFN-EMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505

Query: 207 TL 208
            +
Sbjct: 506 IV 507



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 2/198 (1%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           K+F +++++G+EPD++ Y  +I   C + +  +A  + + +    L+PN +T+ +LI+  
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--ENNISP 130
           CKEG + +A  +  KM EKG   +VVTY+ LI G      M  A  + EEM   +N + P
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+++ +I GLC  G M +A        +   + ++VTY +LI G  +  +  +AM+L 
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELM 385

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M   G+ PD    S L
Sbjct: 386 DEMTSLGLEPDSFTYSIL 403



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 3/179 (1%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTC---VQLKPNSITFTILIDAFCKEGRMDDAT 82
           D ++YNT++   C     D A  L   ++       +PN++++T+L+ A C +   D A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +   M   G +A+VVTY  LI G   +  +  A ++  EMCE+ I PN+V YS L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           CK G  E+    F    +  + PDVV Y  LI   CK G+  +A  + D M+R G+ P+
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 94/185 (50%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P+ ++Y  ++   C+    D+AV L   +    ++ + +T+  LI   C    +D A  
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M E G + NVV YS L+ GY KS   +    V+ EM E  I P++V Y+ LID LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K G  ++A       +   L P+VVTY +LI   CK G   EA+ +   M   G+ PD +
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 204 LLSTL 208
             +TL
Sbjct: 292 TYNTL 296



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A++L  ++T  GLEPD  TY+ +I G+C + ++D A  L   +    ++P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+ A C++G M+ A  +F++M    P  +VV YS +I G  K+ ++K+A ++ +
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + +  ++P+ V+YSI+I+   K G ME A         +  LPDV  +  LI+GY   G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              + ++L   M+   I  D  ++STL+
Sbjct: 551 EINKVLELIREMITKNIALDSKIISTLS 578



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 112/198 (56%), Gaps = 1/198 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++   + + G   +++TYN +I G   ++++ +A++L +++T + L+P+S T++ILI 
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK  ++D A  + S M ++G +  +  Y  L+    +   M+ A +++ EM +NN   
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPL 464

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+YS +I G CK G ++ A       +D  L PD VTY+I+I  + K+G    A  + 
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M  +G +PD  +  +L
Sbjct: 525 KQMTASGFLPDVAVFDSL 542



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 6/171 (3%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM-LEKGP--KANVVT 99
           L EA  L + L  V+   +++++  ++ A C+ G  D A  +   M LE  P  + N V+
Sbjct: 61  LGEATSLLDALPSVR---DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y+ L+      +    A  +   M    +  ++V+Y  LI GLC    +++A+       
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ + P+VV Y+ L++GYCK+GR  +  +++  M   GI PD ++ + L D
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL----K 59
           KE   D A KL  ++   GL PD++T+N  I   CS  ++ EA ++F  +   ++    +
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN IT+ +++  FCKEG +++A  +F KM       N  +Y+  + G  +   +  A  V
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +EM +  + PN+ SY+I++DGLCK G++ +A         + +LPD VTY  L+ GYC 
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            G+ +EA  +   M+R+G  P+    + L  Y+L   G
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILL-YSLWKEG 354



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 89/156 (57%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+I+Y+TII G C   R+ EA + F ++    L+P+S  + + I +FCKEG++  A  +
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M +KG    + TY+ LI G      +   + + +EM E  +SP++  Y+ ++  LC+
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            G +++A       L   + P++ +++ILI+ +CKA
Sbjct: 551 GGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKA 586



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 23/203 (11%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +T  G+ PD +TY T++ GYC   ++ EA  +  ++      PN+ T  IL+ +  KEGR
Sbjct: 296 MTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGR 355

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS-------- 129
           + +A  +  KM EKG   + VT + +IDG   +  +  A ++   M  +  +        
Sbjct: 356 ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNS 415

Query: 130 ---------------PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
                          P+++SYS +I GLCK G + EA   F   +  +L PD   Y + I
Sbjct: 416 YIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFI 475

Query: 175 RGYCKAGRPTEAMQLYDSMLRNG 197
             +CK G+ + A ++   M + G
Sbjct: 476 HSFCKEGKISSAFRVLKDMEKKG 498



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 4/194 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D    L   +   G+ P+  T+N +I   C    LD+A +LF+K+     +PN  
Sbjct: 33  KEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEY 92

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +F IL+  +C+ G       +  +M   G   N V Y+ LI  + K      A  + +EM
Sbjct: 93  SFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEM 152

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----PDVVTYAILIRGYCK 179
            ++ +SP++V+++  I  LC  G + EA   F     + +L    P+++TY +++ G+CK
Sbjct: 153 RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCK 212

Query: 180 AGRPTEAMQLYDSM 193
            G   EA  L++ M
Sbjct: 213 EGMLEEARALFEKM 226



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 111/223 (49%), Gaps = 23/223 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L  A  +  ++ D G+EP++ +YN ++ G C    L +A  L   +T   + P+
Sbjct: 245 LVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPD 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+T L+  +C  G++ +A  +  +M+  G   N  T + L+   +K   +  A ++ +
Sbjct: 305 TVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQ 364

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-------CALDN------------- 161
           +M E     + V+ +I+IDGLC  G +++A+   +        AL N             
Sbjct: 365 KMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSD 424

Query: 162 ---HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                +PD+++Y+ +I G CKAGR  EA + +  M+   + PD
Sbjct: 425 SRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPD 467



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 2/193 (1%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I  YN ++       R+D    L + +    + P + TF +LI   C  G +DDA  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F KM EKG + N  ++  L+ GY ++       ++  EM     SPN V Y+ LI   CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G  ++A         + L PDVVT+   I   C +G+  EA +++  M  + ++  GL 
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL--GLP 196

Query: 205 LSTLADYNLQSSG 217
              +  YNL   G
Sbjct: 197 QPNIITYNLMLGG 209



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 35/209 (16%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-------------------------- 57
           +P+IITYN ++ G+C    L+EA  LFEK+   +                          
Sbjct: 197 QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256

Query: 58  ---------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
                    ++PN  ++ I++D  CK G + DA M+   M   G   + VTY+ L+ GY 
Sbjct: 257 VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316

Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            +  +  A +V  EM  +  SPN  + +IL+  L K G + EA        +   + D V
Sbjct: 317 HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           T  I+I G C  G+  +A+++ + M  +G
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 23/223 (10%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L KE  +  A +L  ++ ++G   D +T N +I G C+  +LD+A+++   +        
Sbjct: 350 LWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAAL 409

Query: 54  ---------------TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
                          +  +  P+ I+++ +I   CK GR+ +A   F +M+ K  + +  
Sbjct: 410 GNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSA 469

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            Y   I  + K   + SAF V ++M +   +  + +Y+ LI GL  +  + E        
Sbjct: 470 IYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEM 529

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +  + PDV  Y  ++   C+ GR  +A  + D ML+ GI P+
Sbjct: 530 RERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPN 572



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 34/225 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  + +A ++   +  +G    + TYN++I G  S N++ E   L +++    + P+  
Sbjct: 480 KEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVS 539

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE-- 121
            +  ++ + C+ GR+ DA  +  +ML+KG   N+ ++S LI  + K+ +  +  +++E  
Sbjct: 540 IYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIA 599

Query: 122 -EMCENN------------ISPNIVS-------------------YSILIDGLCKRGLME 149
             +C +             +   +V                    Y  LID LCK   ++
Sbjct: 600 LNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLD 659

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           +A    H  +D     D  ++  +I G  K G   EA +L + M+
Sbjct: 660 DASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +T+N ++ G      + +A +LFE          +  +  LID  CK+ ++DDA+ +  K
Sbjct: 612 LTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHK 667

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +++KG   +  ++  +IDG  K  N   A ++ E+M E
Sbjct: 668 LIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 118/221 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A + F +L   G +P+++TYN  + G C   ++DEA ++  ++   ++ P+
Sbjct: 223 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ +ID FCK GRMD A  +F++M+      + VT+  L+ G+ + +  + AF V+E
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M      P + +Y++L+D +C    +E AL  +H        PD  TYA LI+  C+A 
Sbjct: 343 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRAR 402

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           R  EA +  D M  + ++P+G +   L +   +     E C
Sbjct: 403 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 443



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 40/247 (16%)

Query: 2   LIKECHLDAALKLFGQLTDR-----GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           L K   +D  L+LF  +  R     G EPD+I+Y+T+I   C   R+D+A + F+++  V
Sbjct: 78  LCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 137

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSK----------------------------- 87
              PN +T++ LID  CK  R+D+A  +  +                             
Sbjct: 138 GCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSEC 197

Query: 88  ------MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
                 M EKG   N++ ++ ++   +K+   + A   +E + ++   PN+V+Y++ + G
Sbjct: 198 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 257

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LCK G ++EA       +++ + PDV+TY+ +I G+CKAGR  +A  ++  M+ +  +P 
Sbjct: 258 LCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 317

Query: 202 GLLLSTL 208
            +   TL
Sbjct: 318 PVTFMTL 324



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 113/199 (56%), Gaps = 6/199 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A +L  ++ +RG++ D++ ++T+I G C   R+DEA++ F+ +   +  PN I
Sbjct: 11  KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVI 69

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK-----GPKANVVTYSCLIDGYFKSQNMKSAFD 118
           T+  +++  CK  R+D+   +F  M ++     G + +V++YS +ID   K+Q +  A++
Sbjct: 70  TYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 129

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            ++ M     +PN+V+YS LIDGLCK   ++EA           ++P  + Y  ++ G+ 
Sbjct: 130 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFK 189

Query: 179 KAGRPTEAMQLYDSMLRNG 197
           + G+P+E ++L   M   G
Sbjct: 190 RQGKPSECLELLLHMKEKG 208



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 117/234 (50%), Gaps = 35/234 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A + F ++   G  P+++TY+++I G C ++R+DEA  L  +L    + P 
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 62  SITFTILIDAFCKEGR-----------------------------------MDDATMMFS 86
           ++ +  +++ F ++G+                                    + A   F 
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           ++L+ G K NVVTY+  + G  K+  +  A+ +  EM E+ ++P++++YS +IDG CK G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            M++A   F   + +  +P  VT+  L+ G+ +  +  EA ++++ M+  G +P
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIP 351



 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 7/199 (3%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           Y T+I G+C   ++D+A +L +++    +K + +  + LI   C++GR+D+A   F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-----CENNISPNIVSYSILIDGLCK 144
           E+    NV+TY+ +++G  K+  +    +++++M       +   P+++SYS +ID LCK
Sbjct: 62  EEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              +++A   F         P+VVTY+ LI G CK  R  EA  L   +    ++P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 205 LSTLADYNLQSSGSQEHCI 223
            + + +   +  G    C+
Sbjct: 181 YNAVVN-GFKRQGKPSECL 198



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 19/219 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  ++ +  + PD+ITY++II G+C   R+D+A  +F ++   +  P+
Sbjct: 258 LCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 317

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  L+  F +  +  +A  +   M+  G    + TY+ L+D    + +++SA ++Y 
Sbjct: 318 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 377

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD-VVTYAIL------- 173
           +M      P+  +Y+ LI  LC+   ++EA         ++++P+  + +A++       
Sbjct: 378 KMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 437

Query: 174 -----------IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                      +   CKAG P EA+++ + M+  G+ PD
Sbjct: 438 EVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPD 476



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 17/213 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++AL+++ ++  +  +PD  TY  +I   C   R+DEA +  + +    + PN      
Sbjct: 369 VESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 428

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CK+G +D+A  +   ++E                  K+     A +V E+M    
Sbjct: 429 LVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKG 472

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+  +Y  ++  LC    ++ A+  F         P +VTY +LI   C A    +A 
Sbjct: 473 VRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAF 532

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +++++M+  G  P    + TL+   L+ +G Q+
Sbjct: 533 RIFEAMVAAGFTPQAQTMRTLSSC-LRDAGYQD 564


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  Q+T  G +PD +TY+ +I GY +L RL EA ++F ++    L PN
Sbjct: 310 LCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN 369

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T    + + CK GR  +A   F  M  KG K ++ +Y  L+ GY           ++ 
Sbjct: 370 IVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFN 429

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I+ N   ++ILI    KRG++++A+  F       + PDVVTY+ +I  + + G
Sbjct: 430 SMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R T+AM+ ++ M+  GI P+  + S++
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVYSSI 516



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 2/193 (1%)

Query: 11  ALKLFGQLTDRG--LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL L   +  +G    PD++ Y+T+I G+ +     +A  LF ++T   +KP+ +T+ ++
Sbjct: 247 ALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           IDA CK   MD A ++  +M   G + + VTYSC+I GY     +K A  ++ EM +  +
Sbjct: 307 IDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGL 366

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PNIV+ +  +  LCK G  +EA   F         PD+ +Y  L+ GY   G   + + 
Sbjct: 367 IPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG 426

Query: 189 LYDSMLRNGIMPD 201
           L++SM  NGI  +
Sbjct: 427 LFNSMKSNGIAAN 439



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 3/196 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ-LFEKLTCVQLKPNSITFTI 67
           D  L LFG +   GL+ D IT NT++   C  NR +EAV  L  +++ +   PN+++++I
Sbjct: 174 DLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSI 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           ++ A C       A  +   M ++G     +VV YS +I G+F       A  ++ EM  
Sbjct: 234 VLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTR 293

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + P++V+Y+++ID LCK   M++A         +   PD VTY+ +I GY   GR  E
Sbjct: 294 QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKE 353

Query: 186 AMQLYDSMLRNGIMPD 201
           A +++  M + G++P+
Sbjct: 354 AAKMFREMKKRGLIPN 369



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 109/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +F   TD G  P +IT+N++I GYC + ++D+A ++ + +  V ++P+
Sbjct: 556 LCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPD 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D + K GR++D   +F +M  KG K N VTY  ++ G F++    +A   + 
Sbjct: 616 IVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  +  +  Y I++ GLC+    +EA+  F      ++   +     +I    K  
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+ ++  +G++P+
Sbjct: 736 RKEEAKELFATISASGLLPN 755



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 1/203 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A K+F ++  RGL P+I+T N+ +   C   R  EA + F+ +T    KP+  ++ 
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  +  EG   D   +F+ M   G  AN   ++ LI  Y K   +  A  ++ EM + 
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++V+YS +I    + G + +A+  F+  +   + P+   Y+ +I+G+C  G   +A
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA 529

Query: 187 MQLYDSMLRNGI-MPDGLLLSTL 208
            +L   M+  GI  PD +  S++
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSV 552



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 36/245 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A + F  +T +G +PDI +Y T++ GY S     + + LF  +    +  N
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN 439

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FTILI A+ K G +DDA ++F++M ++G   +VVTYS +I  + +   +  A + + 
Sbjct: 440 CHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499

Query: 122 EMCENNISPNIVSYSILIDG------------------------------------LCKR 145
           +M    I PN   YS +I G                                    LCK 
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + +A   F  A D    P V+T+  LI GYC  G+  +A ++ D+M   G+ PD +  
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619

Query: 206 STLAD 210
           +TL D
Sbjct: 620 NTLLD 624



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 1/187 (0%)

Query: 8   LDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           L  A +L  ++ ++G+  PDI+ ++++I   C   R+ +A  +F+  T +  +P  ITF 
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFN 585

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +C  G+MD A  +   M   G + ++VTY+ L+DGYFK+  +     ++ EM   
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN V+Y I++ GL + G    A   FH  +++     V  Y I++ G C+     EA
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 187 MQLYDSM 193
           + L+  +
Sbjct: 706 IILFQKL 712



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 106/201 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A K+   +   G+EPDI+TYNT++ GY    R+++ + LF ++    +KPN++T+ I
Sbjct: 597 MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++    + GR   A   F +M+E G    V  Y  ++ G  ++     A  +++++   N
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I   + +I+ + K    EEA   F     + LLP+  TY ++I    K G   +A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDAN 776

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++ SM ++GI+P   LL+ +
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRI 797



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 3/145 (2%)

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P   T+ IL+D  C+  R D    +F  +L  G K + +T + L+     +   + A +V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 120 Y-EEMCENNISPNIVSYSILIDGLCKRGLMEEAL--YAFHCALDNHLLPDVVTYAILIRG 176
               M E    PN VSYSI++  LC   + + AL              PDVV Y+ +I G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPD 201
           +   G   +A  L+  M R G+ PD
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPD 299



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +     AA K F ++ + G    +  Y  I+ G C  N  DEA+ LF+KL  + +K +
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFS 720

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 +I+A  K  R ++A  +F+ +   G   N  TY  +I    K   ++ A +++ 
Sbjct: 721 ITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFS 780

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++ I P     + +I  L ++G + +A           +L +  T ++++  + + G
Sbjct: 781 SMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840

Query: 182 RPTEAMQL 189
           +  E ++L
Sbjct: 841 KYQEDIKL 848


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 124/247 (50%), Gaps = 35/247 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A ++F ++    +EPDI+TYN +  G+C    + E   L +++    L+PNS+T+ I
Sbjct: 156 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGI 215

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ---------------- 111
            I  FC+ G + +A ++F+ + EKG     V YS ++ GY  S                 
Sbjct: 216 AIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQG 275

Query: 112 -------------------NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                              N++ A +V + M E+N+ P+++SYS LI   C+ G M++A 
Sbjct: 276 NLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAH 335

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
             FH  +   L  DV+ Y IL+ GYCKAGR  EA QL+  M   GI PD +  + L D +
Sbjct: 336 LWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGH 395

Query: 213 LQSSGSQ 219
           L+ +  Q
Sbjct: 396 LKETLQQ 402



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 44/254 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KL      +G  PD+  Y+ +I  YC +  L +AV  +E +    ++ N
Sbjct: 10  LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETN 69

Query: 62  -----------------------------------SITFTILIDAFCKEGRMDDATMMFS 86
                                               + + I +D +CK G M++A  + +
Sbjct: 70  CHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 129

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M   G   + + Y+CLI+GY     M++A  V+EEM + NI P+IV+Y+IL  G CK G
Sbjct: 130 EMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 189

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI-------- 198
           L+ E         D+ L P+ +TY I I G+C+ G  +EA  L++ +   GI        
Sbjct: 190 LVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 249

Query: 199 -MPDGLLLSTLADY 211
            M  G LLS   D+
Sbjct: 250 SMVCGYLLSGWTDH 263



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 16/218 (7%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + +  + PD+I+Y+ +I  YC    +D+A   F  +    L  + I +TIL++ +CK GR
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE--------------- 122
           + +A  +F +M   G K +V+ Y+ L+DG+ K    +    + +E               
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425

Query: 123 -MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I P++  Y++LIDG CK   + EA   F   L   L PD   Y  LI GYC  G
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
             ++A  L   M+  GI PD L  S L   +L+S   Q
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 523



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 103/196 (52%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F +  D GL  D + YN  +  YC    ++EAV+L  ++ C  L P+ I +T LI+ +C 
Sbjct: 93  FLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCL 152

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           +G M +A  +F +ML+   + ++VTY+ L  G+ KS  +   FD+ + M ++ + PN ++
Sbjct: 153 KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLT 212

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y I I G C+ G + EA   F+   +  +    V Y+ ++ GY  +G    A  L+  + 
Sbjct: 213 YGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVA 272

Query: 195 RNGIMPDGLLLSTLAD 210
           R G + D    S L +
Sbjct: 273 RQGNLVDHFSCSKLIN 288



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 51/255 (20%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------EKLTCV 56
           +L  A  LF  + ++G++   + Y++++CGY      D A  LF          +  +C 
Sbjct: 225 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCS 284

Query: 57  QL-------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +L                          P+ I+++ LI  +C+ G MD A + F  M+++
Sbjct: 285 KLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 344

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +V+ Y+ L++GY K+  ++ A  ++ +M    I P++++Y++L+DG  K  L +  
Sbjct: 345 GLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGW 404

Query: 152 -----------LYAFHCAL-----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
                      L A H  L     D  + PDV  Y +LI G CKA    EA +L+D ML+
Sbjct: 405 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 464

Query: 196 NGIMPDGLLLSTLAD 210
            G+ PD    + L +
Sbjct: 465 KGLTPDAYAYTALIN 479



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 6/190 (3%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + YN ++ G C   RLDEA +L E        P+   ++ LI ++CK G +  A   +  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M+  G + N    S L+  + K          + +  ++ +  + V Y+I +D  CK G 
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           M EA+   +      L PD + Y  LI GYC  G    A Q+++ ML+  I PD      
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPD------ 174

Query: 208 LADYNLQSSG 217
           +  YN+ +SG
Sbjct: 175 IVTYNILASG 184



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC--SLNRLDEAV-------------- 47
           K   L  A +LF Q+T+ G++PD+I Y  ++ G+   +L +  E +              
Sbjct: 362 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN 421

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +L   +  +Q++P+   +T+LID  CK   + +A  +F +ML+KG   +   Y+ LI+GY
Sbjct: 422 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 481

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
                +  A D+ +EM +  I P+ +++S+L
Sbjct: 482 CSQGEISKAEDLLQEMIDKGIEPDELTFSVL 512



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 57/102 (55%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL   + D  +EPD+  Y  +I G C    L EA +LF+++    L P++  +T LI+ +
Sbjct: 422 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 481

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           C +G +  A  +  +M++KG + + +T+S L     +S+ ++
Sbjct: 482 CSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 523


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 123/216 (56%), Gaps = 9/216 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------- 54
           L +E + +   +L  ++ +  ++P+++T+  +I   C   R+D+A+++ EK++       
Sbjct: 315 LAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGG 374

Query: 55  -CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQN 112
             V ++P+ + +  LID  CK GR  +   +  +M  +KG   + +TY+CLIDG+ K+  
Sbjct: 375 ISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGE 434

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
           ++   ++++EM +  ++PN+V+ + L+ G+C+ G +  A+  F  A    +  D VTY  
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           LI  +C      +AM+L++ ML++G  PD ++  TL
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 98/193 (50%)

Query: 19  TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM 78
           + +G  PD ITYN +I G+C    +++  +LF+++    + PN +T   L+   C+ GR+
Sbjct: 411 SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470

Query: 79  DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
             A   F +   +G K + VTY+ LI+ +    N + A +++ EM ++  SP+ + Y  L
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           I G  + G M +A +         + PD V Y  LI G+C+  +     ++   M   G+
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGL 590

Query: 199 MPDGLLLSTLADY 211
            PD +  +TL  Y
Sbjct: 591 KPDTITYNTLIAY 603



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 104/194 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            + +A+  F +   RG++ D +TY  +I  +C++N  ++A++LF ++      P++I + 
Sbjct: 469 RVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYY 528

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F + GRM DA+ + +++ + G + + V Y+ LI G+ ++      F++ +EM E 
Sbjct: 529 TLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEA 588

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+ ++Y+ LI    K G ++ A       +   ++P V TY  +I  YC  G   EA
Sbjct: 589 GLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEA 648

Query: 187 MQLYDSMLRNGIMP 200
           M+++  M     +P
Sbjct: 649 MEIFKDMKAASKVP 662



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 98/197 (49%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++   +LF ++   G+ P+++T NT++ G C   R+  AV  F +     +K +++
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LI+AFC     + A  +F++ML+ G   + + Y  LI G+ ++  M  A  V  E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P+ V Y+ LI G C+               +  L PD +TY  LI    K G  
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 184 TEAMQLYDSMLRNGIMP 200
             A ++   M++ G++P
Sbjct: 611 KFAQKVMRKMIKAGVVP 627



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 1/196 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + + A++LF ++   G  PD I Y T+I G+    R+ +A  +  +L  + ++P+++ + 
Sbjct: 504 NFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYN 563

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC+  +      M  +M E G K + +TY+ LI    K+ ++K A  V  +M + 
Sbjct: 564 TLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA 623

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            + P + +Y  +I+  C  G   EA+  F      + + P+ V Y ILI   CK  +   
Sbjct: 624 GVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKS 683

Query: 186 AMQLYDSMLRNGIMPD 201
           A+ L + M   G+ P+
Sbjct: 684 AVSLMEDMKIWGVTPN 699



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 2/204 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA+  L  +L   G+ PD + YNT+I G+C  N+     ++ +++    LKP++IT+  L
Sbjct: 542 DASFVL-AELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTL 600

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CENN 127
           I    K G +  A  +  KM++ G    V TY  +I+ Y  + N   A +++++M   + 
Sbjct: 601 IAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK 660

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN V Y+ILI+ LCK   ++ A+          + P+  TY  + +G        +  
Sbjct: 661 VPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVF 720

Query: 188 QLYDSMLRNGIMPDGLLLSTLADY 211
           +  D M+ +   PD + +  L ++
Sbjct: 721 EFMDRMIEHACNPDYITMEILTEW 744



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 21/191 (10%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +I   C   + +    LF ++  +     S     L+    +EG  +    +  KM+E  
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN--------NISPNIVSYSILIDGLCK 144
            + NVVT+  LI+   K + +  A +V E+M           ++ P++V Y+ LIDGLCK
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 145 RGLMEEALYAFH-------CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
            G  +E L           CA      PD +TY  LI G+CKAG   +  +L+D M + G
Sbjct: 396 VGRQQEGLGLMERMRSQKGCA------PDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG 449

Query: 198 IMPDGLLLSTL 208
           + P+ + ++TL
Sbjct: 450 VAPNVVTVNTL 460



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKPNS 62
           K   L  A K+  ++   G+ P + TY  +I  YC     +EA+++F+ +    ++ PN+
Sbjct: 606 KNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNT 665

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + + ILI++ CK  ++  A  +   M   G   N  TY+ +  G    ++++  F+  + 
Sbjct: 666 VIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDR 725

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEE 150
           M E+  +P+ ++  IL + L   G +E 
Sbjct: 726 MIEHACNPDYITMEILTEWLSAVGEIER 753



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 9/176 (5%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
           DE V L  K     +  +S     LI   C+  + +    +F++M++ G        + L
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH------- 156
           + G  +  N     ++ E+M E +I PN+V++ ILI+ +CK   +++AL           
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 157 -CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML-RNGIMPDGLLLSTLAD 210
              +   + PDVV Y  LI G CK GR  E + L + M  + G  PD +  + L D
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLID 427


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 122/208 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+++F ++  +G +PD+ T+N++I G C ++ +  A+ L   +    +  N++
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+AF + G + +A  + ++M+ +G   + +TY+ LI G  ++  +  A  ++E+M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  +P+ +S +ILI+GLC+ G++EEA+      +     PD+VT+  LI G C+AGR 
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            + + ++  +   GI PD +  +TL  +
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSW 678



 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 122/220 (55%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  AL++   + ++G +P++ +Y  ++ G+C L ++DEA  +  +++   LKPN++
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F  LI AFCKE R+ +A  +F +M  KG K +V T++ LI G  +   +K A  +  +M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  N V+Y+ LI+   +RG ++EA    +  +      D +TY  LI+G C+AG  
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            +A  L++ MLR+G  P  +  + L +  L  SG  E  +
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILIN-GLCRSGMVEEAV 619



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 5/203 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A K+  ++  RG  PD ITY  ++ G C + R+D A  LF ++     KP  + F 
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFN 357

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LI  F   GR+DDA  + S M+   G   +V TY+ LI GY+K   +  A +V  +M  
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               PN+ SY+IL+DG CK G ++EA    +    + L P+ V +  LI  +CK  R  E
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A++++  M R G  PD    ++L
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSL 500



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 107/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA   L   +T  G+ PD+ TYN++I GY     +  A+++   +     KPN  ++TIL
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D FCK G++D+A  + ++M   G K N V ++CLI  + K   +  A +++ EM     
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ +++ LI GLC+   ++ AL+     +   ++ + VTY  LI  + + G   EA +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L + M+  G   D +  ++L
Sbjct: 551 LVNEMVFQGSPLDEITYNSL 570



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+AL L   +T  G  P+ + Y T+I      NR++EA+QL E++  +   P++ TF 
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I   CK  R+++A  M ++ML +G   + +TY  L++G  K   + +A D++  + + 
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 350

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTE 185
              P IV ++ LI G    G +++A       + ++ ++PDV TY  LI GY K G    
Sbjct: 351 ---PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++   M   G  P+    + L D
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVD 432



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 97/174 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   +  A KL  ++  +G   D ITYN++I G C    +D+A  LFEK+      P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I+  ILI+  C+ G +++A     +M+ +G   ++VT++ LI+G  ++  ++    ++ 
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           ++    I P+ V+++ L+  LCK G + +A       +++  +P+  T++IL++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 6/197 (3%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           CH  AA  +F  +  R + P + T+  ++  +C++N +D A+ L   +T     PNS+ +
Sbjct: 197 CHKVAA-NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             LI +  K  R+++A  +  +M   G   +  T++ +I G  K   +  A  +   M  
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              +P+ ++Y  L++GLCK G ++ A   F+        P++V +  LI G+   GR  +
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDD 371

Query: 186 AMQLYDSMLRN-GIMPD 201
           A  +   M+ + GI+PD
Sbjct: 372 AKAVLSDMVTSYGIVPD 388



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 74/167 (44%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EP   +YN ++    S N    A  +F  +   ++ P   TF +++ AFC    +D A  
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +   M + G   N V Y  LI    K   +  A  + EEM      P+  +++ +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           K   + EA    +  L     PD +TY  L+ G CK GR   A  L+
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 72/141 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D A  LF ++   G  P  I+ N +I G C    ++EAV+  +++      P+
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+  C+ GR++D   MF K+  +G   + VT++ L+    K   +  A  + +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693

Query: 122 EMCENNISPNIVSYSILIDGL 142
           E  E+   PN  ++SIL+  +
Sbjct: 694 EGIEDGFVPNHRTWSILLQSI 714



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 61/112 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   ++ A++   ++  RG  PDI+T+N++I G C   R+++ + +F KL    + P+
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           ++TF  L+   CK G + DA ++  + +E G   N  T+S L+      + +
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 4/144 (2%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
            K  ++   IL+   C +     A  +F  ML +     + T+  ++  +     + SA 
Sbjct: 182 FKSYNVVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +  +M ++   PN V Y  LI  L K   + EAL           +PD  T+  +I G 
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK  R  EA ++ + ML  G  PD
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPD 321



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 99  TYSCLIDGYFKSQNM-----------KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
            YSC  +  FKS N+           K A +V+ +M    I P + ++ +++   C    
Sbjct: 175 VYSC--EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           ++ AL        +  +P+ V Y  LI    K  R  EA+QL + M   G +PD 
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 106/194 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD   +L   +   G++PD+ TY+ +I G C   ++DEA +LF+++    L P  +TFT 
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTT 235

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR+D A  ++ +ML +    +++TY+ LI G  K  B+K A  +  EM    
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKG 295

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ ++Y+ LIDG CK G ++ A       +  ++  D V Y  LI G C+ GR  +A 
Sbjct: 296 XKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 355

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML  G  PD
Sbjct: 356 KMLREMLSVGXKPD 369



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 115/205 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE ++  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 137 KEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVY 196

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+++LI+  CKE +MD+A  +F +ML  G     VT++ LIDG+ K+  +  A ++Y++M
Sbjct: 197 TYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQM 256

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A             PD +TY  LI G CK G  
Sbjct: 257 LSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDL 316

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +    M++  I  D +  + L
Sbjct: 317 DTAFEHRKRMIQENIRLDDVAYTAL 341



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++   GL P  +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 205 LCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD 264

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI   CK+G +  A ++  +M  KG K + +TY+ LIDG  K  ++ +AF+  +
Sbjct: 265 LITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRK 324

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + NI  + V+Y+ LI GLC+ G   +A       L     PD  TY ++I  +CK G
Sbjct: 325 RMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKG 384

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
                 +L   M R+G +P      ++  YN+  +G
Sbjct: 385 DVWTGSKLLKEMQRDGHVP------SVVTYNVLMNG 414



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 100 LMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPS 159

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L+  + + G +D+   + S M   G + +V TYS LI+G  K   M  A ++++
Sbjct: 160 VVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFD 219

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P  V+++ LIDG CK G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 220 EMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKG 279

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L   M   G  PD +  +TL D
Sbjct: 280 BLKQAHVLIXEMSLKGXKPDKITYTTLID 308



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           + +   F+ LI A+ + G + DA   +    E        T   +++   K +  K  + 
Sbjct: 52  RSDIXVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            Y+E+ E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY 
Sbjct: 112 FYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYI 171

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + G   E  +L  +M  +G+ PD    S L +
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 203


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 116/206 (56%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  ++   +L  ++T RG++PDI TYN ++ G C++ +LD+A++L+++     L  N  T
Sbjct: 513 EGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHT 572

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + I+++ +CK  R++D   +F+++L K  + N + Y+ +I  + ++ N+ +A  + E M 
Sbjct: 573 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 632

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I PN  +YS LI G+C  GL+E+A +          +P+VV Y  LI GYCK G+  
Sbjct: 633 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 692

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A   +  M+   I P+    + + D
Sbjct: 693 TAESTWLEMISFNIHPNKFTYTVMID 718



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 106/196 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF +L  + +E + I YN II  +C    +  A+QL E +    + PN  T++ LI   C
Sbjct: 592 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             G ++DA  +  +M ++G   NVV Y+ LI GY K   M +A   + EM   NI PN  
Sbjct: 652 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 711

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+++IDG CK G ME+A        ++ ++PDVVTY +L  G+CKA     A ++ D M
Sbjct: 712 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 771

Query: 194 LRNGIMPDGLLLSTLA 209
              G+  D +  +TL 
Sbjct: 772 ATEGLPVDEITYTTLV 787



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+KL+ +    GL  +I TY  ++ GYC  NR+++   LF +L   +++ NSI + I
Sbjct: 551 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A C+ G +  A  +   M  KG   N  TYS LI G      ++ A  + +EM +  
Sbjct: 611 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 670

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ LI G CK G M+ A   +   +  ++ P+  TY ++I GYCK G   +A 
Sbjct: 671 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKAN 730

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            L   M  +GI+PD      +  YN+ ++G
Sbjct: 731 NLLIKMKESGIVPD------VVTYNVLTNG 754



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 104/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A ++  ++ +RGL  D ITYN +I G+C+  +++   +L E++T   ++P+  T+  
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  G++DDA  ++ +    G  +N+ TY  +++GY K+  ++   +++ E+    
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N + Y+I+I   C+ G +  AL          +LP+  TY+ LI G C  G   +A 
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660

Query: 188 QLYDSMLRNGIMPD 201
            L D M + G +P+
Sbjct: 661 HLIDEMRKEGFVPN 674



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 3/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    +   ++F ++   G  PD+ ++  +I   C   +++ A++LF K+  + + PN
Sbjct: 196 LVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPN 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I+  C+ GR+D+A  +  KM  KG + N+ TY  LI+G  K         + +
Sbjct: 255 VVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILD 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +PN+V ++ LIDG CK G +E AL      +  ++ P  VT   L++G+CK+ 
Sbjct: 315 EMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 374

Query: 182 RPTEAMQLYDSMLRNG--IMPD 201
           +   A    + +L +G  I PD
Sbjct: 375 QIEHAENALEEILSSGLSIHPD 396



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 107/201 (53%), Gaps = 7/201 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           A+ +F  L  +G  P + T N  +      N  ++  ++F  ++   C    P+  +FT 
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC----PDVFSFTN 225

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+A CK G+M++A  +F KM + G   NVVTY+C+I+G  ++  + +AF++ E+M    
Sbjct: 226 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 285

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +Y  LI+GL K    ++  +     +     P+VV +  LI GYCK G    A+
Sbjct: 286 VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++ D M+   I P  + L +L
Sbjct: 346 KIKDVMISKNITPTSVTLYSL 366



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 94/168 (55%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L   +  +G+ P+  TY+++I G C++  +++A  L +++      PN + +T LI
Sbjct: 623 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 682

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             +CK G+MD A   + +M+      N  TY+ +IDGY K  NM+ A ++  +M E+ I 
Sbjct: 683 GGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 742

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           P++V+Y++L +G CK   M+ A           L  D +TY  L+ G+
Sbjct: 743 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 100/194 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K+    +A +    +  R   P  +    ++CG C   +  EA +L+ +L       
Sbjct: 404 WLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA 463

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T   LI   C  G++ +A+ +  +MLE+G   + +TY+ LI G+     ++  F + 
Sbjct: 464 SKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLR 523

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +  I P+I +Y+ L+ GLC  G +++A+  +     + L+ ++ TY I++ GYCKA
Sbjct: 524 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 583

Query: 181 GRPTEAMQLYDSML 194
            R  +   L++ +L
Sbjct: 584 NRIEDVENLFNELL 597



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL+A  +L+ +L ++G     +T N +I G C   +L EA ++ +++    L  + IT+ 
Sbjct: 446 HLEAT-ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 504

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC EG+++    +  +M ++G + ++ TY+ L+ G      +  A  +++E   +
Sbjct: 505 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 564

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  NI +Y I+++G CK   +E+    F+  L   +  + + Y I+I+ +C+ G    A
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 624

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           +QL ++M   GI+P+    S+L
Sbjct: 625 LQLLENMKSKGILPNCATYSSL 646



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 77/134 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L  ++   G  P+++ Y  +I GYC L ++D A   + ++    + PN  T+T+
Sbjct: 656 VEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTV 715

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID +CK G M+ A  +  KM E G   +VVTY+ L +G+ K+ +M +AF V ++M    
Sbjct: 716 MIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG 775

Query: 128 ISPNIVSYSILIDG 141
           +  + ++Y+ L+ G
Sbjct: 776 LPVDEITYTTLVHG 789



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   LD A +L  ++T +G++P++ TY  +I G   LN  D+   + +++      PN
Sbjct: 265 LCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPN 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  LID +CK G ++ A  +   M+ K      VT   L+ G+ KS  ++ A +  E
Sbjct: 325 VVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  + +S +  +   ++  LCK+     A       L  +  P  +   +L+ G CK G
Sbjct: 385 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 444

Query: 182 RPTEAMQLYDSMLRNG 197
           +  EA +L+  +L  G
Sbjct: 445 KHLEATELWFRLLEKG 460



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK    D    +  ++   G  P+++ +N +I GYC +  ++ A+++ + +    + P 
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN------VVTYSC------------- 102
           S+T   L+  FCK  +++ A     ++L  G   +      VV + C             
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 419

Query: 103 ----------------LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                           L+ G  K      A +++  + E     + V+ + LI GLC  G
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 479

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            + EA       L+  L  D +TY  LI G+C  G+     +L + M + GI PD
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 534



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 4/207 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---LDEAVQLFEKLTCVQLKPNSI 63
           H++ A  LFG  +  G       ++ +I  Y +  R      AV +F  L      P+  
Sbjct: 128 HIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLK 187

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T    + +  K    +    +F +++ +G   +V +++ +I+   K   M++A +++ +M
Sbjct: 188 TCNFXLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKM 246

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISPN+V+Y+ +I+GLC+ G ++ A           + P++ TY  LI G  K    
Sbjct: 247 EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 306

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +   + D M+  G  P+ ++ + L D
Sbjct: 307 DKVNHILDEMIGAGFNPNVVVFNNLID 333



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 54/101 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A   + ++    + P+  TY  +I GYC L  +++A  L  K+    + P+ +T+ 
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 749

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +L + FCK   MD+A  +  +M  +G   + +TY+ L+ G+
Sbjct: 750 VLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|302780413|ref|XP_002971981.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
 gi|300160280|gb|EFJ26898.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
          Length = 294

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 106/181 (58%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RG+EP+++TYN++  G+   NR+D  + L E++   +  P+ IT+  LID  CK GR+ +
Sbjct: 6   RGIEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPE 65

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  +F  M  K    +V+ YSCLI G+ K + +  A  ++++  +  I P++V++S L++
Sbjct: 66  ANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVE 125

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C  GL+++A       + +   PDV TY  L+ G+CK GR  EA ++   M + G  P
Sbjct: 126 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 185

Query: 201 D 201
           +
Sbjct: 186 N 186



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +LFG +  +    D+I Y+ +I G+C L R++ A  LF+      + P+
Sbjct: 57  LCKTGRVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPD 116

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+ L++ +C  G +DDA  +  +M+      +V TY+ L+DG+ K   M  A  V +
Sbjct: 117 VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLK 176

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKA 180
            M +    PN+V +S LI G C  G +EEA         D +   D+  Y +++ G C  
Sbjct: 177 RMAKRGCQPNVV-WS-LIGGFCGTGDLEEARKMLERLERDENCKADMFAYQVMMDGLCTT 234

Query: 181 GRPTEAMQLYDSMLRNGIMP 200
           GR + A++L +++ ++G  P
Sbjct: 235 GRMSAALELLEAIKQSGTPP 254



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 101/188 (53%), Gaps = 3/188 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  LF     + + PD++T++T++ GYC+   +D+A +L E++      P+  T+T
Sbjct: 97  RINMACTLFDDTLKQAILPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 156

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CE 125
            L+D FCK GRM +A  +  +M ++G + NVV    LI G+  + +++ A  + E +  +
Sbjct: 157 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVWS--LIGGFCGTGDLEEARKMLERLERD 214

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            N   ++ +Y +++DGLC  G M  AL        +   P    Y  LIRG C+     +
Sbjct: 215 ENCKADMFAYQVMMDGLCTTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 274

Query: 186 AMQLYDSM 193
           A+++ + M
Sbjct: 275 ALEVLEEM 282



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 2/190 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D  L L  ++      PDIITYNT+I G C   R+ EA +LF  +       + I ++
Sbjct: 27  RVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEANRLFGDMKAKFCNLDVIMYS 86

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FCK  R++ A  +F   L++    +VVT+S L++GY  +  +  A  + EEM  +
Sbjct: 87  CLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 146

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + SP++ +Y+ L+DG CK G M EA             P+VV    LI G+C  G   EA
Sbjct: 147 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVWS--LIGGFCGTGDLEEA 204

Query: 187 MQLYDSMLRN 196
            ++ + + R+
Sbjct: 205 RKMLERLERD 214



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           ++PN +T+  L   F    R+D   ++  +M       +++TY+ LIDG  K+  +  A 
Sbjct: 8   IEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEAN 67

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ +M     + +++ YS LI G CK   +  A   F   L   +LPDVVT++ L+ GY
Sbjct: 68  RLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVEGY 127

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           C AG   +A +L + M+ +   PD    ++L D
Sbjct: 128 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 160



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 68/124 (54%)

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +++ +G + N+VTY+ L  G++ +  +     + EEM      P+I++Y+ LIDGLCK G
Sbjct: 2   RVIVRGIEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTG 61

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + EA   F          DV+ Y+ LI G+CK  R   A  L+D  L+  I+PD +  S
Sbjct: 62  RVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFS 121

Query: 207 TLAD 210
           TL +
Sbjct: 122 TLVE 125


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 109/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +LD A ++F ++   G +P+ +TY+ +I G CS  RL+EA+ + E++    ++P   
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +TI I + C  GR  +A  +  KM ++G   NV TY+ LI G  +    + A  VY +M
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P  V+YS LI+ L   G  E AL  F   L +  LP+  TY ++I+G+C  G  
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A  ++D ML+ G  P+
Sbjct: 429 QKATAIFDQMLKAGPSPN 446



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 114/206 (55%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E   + AL +F  +      P+  TYN II G+CS+  + +A  +F+++      PN IT
Sbjct: 390 EGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVIT 449

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + I+I  + K+G M++A  +   M   G K +  TY+ LI G+ +   ++ AF ++ EM 
Sbjct: 450 YNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMV 509

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ ISPN+V+Y+ +I+G      +++AL  F   +++  +P   TY ++I G+ K  R +
Sbjct: 510 EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRIS 569

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA      M++ G++P+ +  ++  D
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFID 595



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++   + A+ ++ ++   GL P  +TY+ +I       R + A+ +FE +      PN
Sbjct: 352 LSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPN 411

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T+ ++I  FC  G +  AT +F +ML+ GP  NV+TY+ +I  YFK   M +A  + E
Sbjct: 412 TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE 471

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N +  +  +Y+ LI G  + G +E A   F+  +++ + P+VVTY  +I GY    
Sbjct: 472 MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVA 531

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           +  +A+ L+  M+ +G +P          YN+  SG
Sbjct: 532 KVDDALALFWKMVESGNVPSS------GTYNMMISG 561



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 31/229 (13%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            K+ +++ A++L   +   GL+ D  TY  +I G+    +L+ A  LF ++    + PN 
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +I+ +    ++DDA  +F KM+E G   +  TY+ +I G+ K+  +  A +   +
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-----------CA------------- 158
           M +  + PN+++Y+  IDGLCK G    A   FH           C              
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637

Query: 159 -------LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
                  LD+   P+V TY  L+RG C  GR  EA QL +SM + G+ P
Sbjct: 638 AEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQP 686



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 109/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A  +F Q+   G  P++ITYN II  Y     ++ A++L E +    LK ++ T+ 
Sbjct: 427 YIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  F + G+++ A  +F++M+E G   NVVTY+ +I+GY     +  A  ++ +M E+
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+  +Y+++I G  K   + EA       +   LLP+V+TY   I G CK GR + A
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +++  M +    P+    S+L D
Sbjct: 607 FKIFHEMKKRDYFPNLCTYSSLID 630



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L+ A+ +  ++ D+G+EP +  Y   I   C   R  EAV+L  K+      PN
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPN 341

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T LI    ++G+ + A  ++ KML  G     VTYS LI+  +     ++A  ++E
Sbjct: 342 VQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFE 401

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  ++  PN  +Y+++I G C  G +++A   F   L     P+V+TY I+I  Y K G
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
               AM+L + M  NG+  D    + L        G  EH  
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLIS-GFSRGGKLEHAF 502



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 102/191 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL G++  RG  P++ TY  +I G     + + A+ ++ K+    L P ++T++ LI+
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
               EGR + A  +F  ML      N  TY+ +I G+     ++ A  ++++M +   SP
Sbjct: 386 QLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSP 445

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++Y+I+I    K+G M  A+        N L  D  TYA LI G+ + G+   A  L+
Sbjct: 446 NVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLF 505

Query: 191 DSMLRNGIMPD 201
           + M+ +GI P+
Sbjct: 506 NEMVEHGISPN 516



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 96/193 (49%), Gaps = 4/193 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++ + G  P   TYN +I G+   NR+ EA     K+    L PN IT+T 
Sbjct: 533 VDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTS 592

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ID  CK GR   A  +F +M ++    N+ TYS LIDG  +    + A  + ++ CE  
Sbjct: 593 FIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE-- 650

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+ +Y+ L+ GLC +G   EA           L P    Y  L+ G CK      A+
Sbjct: 651 --PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESAL 708

Query: 188 QLYDSMLRNGIMP 200
           +++DSM+  G  P
Sbjct: 709 KIFDSMVTTGFQP 721



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 80/144 (55%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           ++PN  TF  +I   C +G++ +A ++   +   G   +  TY+ LI G+ K+ N+  AF
Sbjct: 198 IRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAF 257

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           ++++ M ++   PN V+YS LI+GLC  G +EEA+      +D  + P V  Y I I   
Sbjct: 258 EMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSL 317

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           C AGR  EA++L   M + G  P+
Sbjct: 318 CDAGRSCEAVKLLGKMKKRGCGPN 341



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A    G++  +GL P++ITY + I G C   R   A ++F ++      PN  
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLC 623

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ LID  C+EG+ +DA     ++L+ G + NV TY+ L+ G         A  + E M
Sbjct: 624 TYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESM 679

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+   Y  L+ G CK   +E AL  F   +     P +  Y  LI   CKA   
Sbjct: 680 KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFR 739

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A  ++ +ML+     D ++ + L D
Sbjct: 740 QKAQCMFQTMLKKHWNSDEVVWTVLLD 766



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 4/192 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F ++  R   P++ TY+++I G C   + ++A +L +       +PN
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPN 652

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L+   C +GR  +A  +   M +KG + +   Y  L+ G  K+  ++SA  +++
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P +  Y  LI  LCK    ++A   F   L  H   D V + +L+ G  K G
Sbjct: 713 SMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEG 772

Query: 182 RPTEAMQLYDSM 193
               +++L   M
Sbjct: 773 ETDLSLELLHVM 784



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 81/173 (46%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +L D G EP++ TY T++ G C   R  EA QL E +    L+P+   +  L+   CK  
Sbjct: 643 RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNL 702

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            ++ A  +F  M+  G +  +  Y  LI    K+   + A  +++ M + + + + V ++
Sbjct: 703 EVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWT 762

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           +L+DGL K G  + +L   H     +   +  T  +L R     G   E  Q+
Sbjct: 763 VLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQI 815



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%)

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           DVY EM  + I PN+ +++ +I  LC +G ++EA             PD  TY  LI G+
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK G    A +++D M+++G  P+ +  S L +
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALIN 280



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 60/136 (44%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L   +  +GL+P    Y  ++ G C    ++ A+++F+ +     +P    +  LI 
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK      A  MF  ML+K   ++ V ++ L+DG  K      + ++   M   N + 
Sbjct: 732 ALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTL 791

Query: 131 NIVSYSILIDGLCKRG 146
           N  +  +L   L   G
Sbjct: 792 NFQTRVMLARELSALG 807


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 114/197 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+ + G  PD+ITY T+I G+C    +DEAV L + ++    KPN+I++TI
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C+  R  DA  + S M+++G   N VT++ LI+   K   ++ A ++ ++M  N 
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  EEAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 548

Query: 188 QLYDSMLRNGIMPDGLL 204
           Q++DS+    +  D  L
Sbjct: 549 QMFDSIQDATVRSDAAL 565



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 126/241 (52%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           K+ H + A  +  ++   GL+P+++ YNT++ G CS  R +EA                 
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 354

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N ++Y+ ++ G  +++    A ++   M +    PN V+++ LI+ +CK+GL+
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLV 474

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ ++ S++
Sbjct: 475 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 534

Query: 209 A 209
           A
Sbjct: 535 A 535



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 12/207 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  +L   G EPDI++YN ++ G C   R D+  +L  ++  V   PN  TF  
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNT 253

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+ G  +      S+M E G   ++  Y+ +IDG  K  + + A D+   M    
Sbjct: 254 LIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 313

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           + PN+V Y+ ++ GLC     EEA      ++   C LD+      VT+ IL+  +C+ G
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD------VTFNILVDFFCQNG 367

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                ++L + ML +G +PD +  +T+
Sbjct: 368 LVDRVIELLEQMLEHGCIPDVITYTTV 394



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN+I
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI 529

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ +  A  +EGR D    MF  + +   +++   Y+ +I    K      A D +  M
Sbjct: 530 IYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 589

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
             N   PN  +Y+ILI GL   GL+ EA
Sbjct: 590 VSNGCMPNESTYTILIRGLASEGLVREA 617



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A++    L  +G   D    N ++   C    +DE V+L  KL     +P+ +++  ++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C   R DD   +  +M+  G   NV T++ LI    ++   +   +   +M E+  +
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++  Y+ +IDG+CK G  E A           L P+VV Y  +++G C A R  EA  L
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQS 215
              M +     D +  + L D+  Q+
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQN 366



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 89/198 (44%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++  RG        + I+   C       AV+  + L       +S    +++ 
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G +D+   +  K+   G + ++V+Y+ ++ G   ++      ++  EM      P
Sbjct: 187 AICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPP 246

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +++ LI  LC+ GL E+   A     ++   PD+  YA +I G CK G    A  + 
Sbjct: 247 NVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 306

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G+ P+ +  +T+
Sbjct: 307 SRMPSYGLKPNVVCYNTV 324



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 15/191 (7%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN +I GYC   R  +          V + PN+ T+  ++ + C  G + DA  +  
Sbjct: 76  VVAYNAMIAGYC---RAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLD 132

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  +G  A       +++   +    +SA    + +     + +  + ++++  +C++G
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192

Query: 147 LMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            ++E       L +F C       PD+V+Y  +++G C A R  +  +L   M+R G  P
Sbjct: 193 CVDEGVELLRKLPSFGCE------PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPP 246

Query: 201 DGLLLSTLADY 211
           +    +TL  Y
Sbjct: 247 NVATFNTLIAY 257



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 60/123 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL+L   + ++G+ P+ I Y+++        R D+ +Q+F+ +    ++ +
Sbjct: 503 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 562

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  +I + CK    D A   F+ M+  G   N  TY+ LI G      ++ A D+  
Sbjct: 563 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 622

Query: 122 EMC 124
           E+C
Sbjct: 623 ELC 625



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 40/90 (44%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E   D  +++F  + D  +  D   YN +I   C     D A+  F  +      PN
Sbjct: 538 LSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 597

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK 91
             T+TILI     EG + +A  + S++  +
Sbjct: 598 ESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            + LI + C  GR  DA          G  A VV Y+ +I GY ++  + +A  +   + 
Sbjct: 47  LSALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV- 102

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEAL 152
              + PN  +Y  ++  LC RGL+ +AL
Sbjct: 103 --PVPPNAYTYFPIVRSLCARGLIADAL 128


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 120/219 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  A  LF ++ + G  PD++T+N++I GY     LDE  QL E++     K +
Sbjct: 198 LCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKAD 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK GRM+ A   F+ M  +G  ANVVT+S  +D + K   ++ A  ++ 
Sbjct: 258 VVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFA 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    ++ N  +Y+ LIDG CK G +++A+      +   +  +VVTY +L+ G CK  
Sbjct: 318 QMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +  EA  +   M + G+  + LL +TL   +  +  S++
Sbjct: 378 KVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 108/214 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A   F  +   G+  +++T++T +  +C    + EA++LF ++    +  N  T+T
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYT 332

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  CK GR+DDA ++  +M+ +G   NVVTY+ L+DG  K + +  A DV   M + 
Sbjct: 333 CLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  N + Y+ LI G       E+AL       +  L  D+  Y  LI+G C   +  EA
Sbjct: 393 GVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             L   M  +G+ P+ ++ +T+ D   +S    E
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 106/198 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+KLF Q+  RG+  +  TY  +I G C   RLD+A+ L +++    +  N +
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+L+D  CKE ++ +A  +   M + G +AN + Y+ LI G+F ++N + A  +  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               +  +I  Y  LI GLC    ++EA        ++ L P+ + Y  ++    K+G+ 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA+ +   +L +G  P+
Sbjct: 485 PEAIAMLQKILDSGFQPN 502



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 4/191 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A++   ++ +  + P+  T N I+             +LFE+L      PN  TF I
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNI 193

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CKEG + +A  +FS+M E G   +VVT++ LIDGY K   +     + EEM  + 
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              ++V+Y+ LI+  CK G ME A   F       ++ +VVT++  +  +CK G   EAM
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 188 QLYDSMLRNGI 198
           +L+  M   G+
Sbjct: 314 KLFAQMRVRGM 324



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 22/188 (11%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL L  ++ ++GLE DI  Y  +I G C++++LDEA  L  K+    L+PN I +T +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 69  IDAFCKEGR----------------------MDDATMMFSKMLEKGPKANVVTYSCLIDG 106
           +DA  K G+                      +++A  +F++M+ KG   + V Y+ L+DG
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 534

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
           Y K  N+  AF +  +M ++ +  ++  Y+  I G C   +M EA   F   + + + PD
Sbjct: 535 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 594

Query: 167 VVTYAILI 174
              Y  LI
Sbjct: 595 RAVYNCLI 602



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 57/255 (22%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ L  ++  +G+  +++TY  ++ G C   ++ EA  +   +    ++ N +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 64  TFTILI-----------------------------------DAFCKEGRMDDATMMFSKM 88
            +T LI                                      C   ++D+A  + +KM
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459

Query: 89  LEKGPKANVVTYSCLIDGYFKSQN----------------------MKSAFDVYEEMCEN 126
            E G + N + Y+ ++D  FKS                        +  A  ++ EM   
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHK 519

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +S + V Y+ L+DG  K+G + +A       +D+ L  D+  Y   I G+C      EA
Sbjct: 520 GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 579

Query: 187 MQLYDSMLRNGIMPD 201
            +++  M+ +GI PD
Sbjct: 580 REVFSEMIGHGIAPD 594



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A++LF ++  +G+  D + Y  ++ GY     L +A  L  K+    L+ +   +T 
Sbjct: 506 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 565

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
            I  FC    M +A  +FS+M+  G   +   Y+CLI
Sbjct: 566 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+ +L  A  L  ++ D GL+ D+  Y   I G+C+LN + EA ++F ++    + P+ 
Sbjct: 536 LKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 595

Query: 63  ITFTILI 69
             +  LI
Sbjct: 596 AVYNCLI 602


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ ++  A K F ++++ GL PD   Y  II GYC +  +++A Q   ++    + P+
Sbjct: 366 LCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPS 425

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---- 117
             T+T+LI+A CK G M  A  +  +M+ +G   +VVT++CLIDG+ K   ++ AF    
Sbjct: 426 VTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLD 485

Query: 118 -------------------------------DVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                          D+  E+    +SP++++++ +IDG  K+G
Sbjct: 486 IMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKG 545

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
             EEA   +    + H+ PDVVT + L+ GYC+A R  EA  L+  ML  G+ PD +L +
Sbjct: 546 NFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYN 605

Query: 207 TL 208
            L
Sbjct: 606 NL 607



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 106/188 (56%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++   GL PD++T+N +I G+     L +A +L + +    + P+++T+  LI +  
Sbjct: 448 LLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLI 507

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             G  ++A  +  +++ +G   +V+T++ +IDG+ K  N + AF V+  M E ++ P++V
Sbjct: 508 ARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVV 567

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           + S L++G C+   M+EA   F   LD  L PD+V Y  LI G+C AG    A  L   M
Sbjct: 568 TCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMM 627

Query: 194 LRNGIMPD 201
           + +G +P+
Sbjct: 628 IDDGFLPN 635



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +L  A +L   +   G+ PD +TYN +I    +    +EA  +  +L    L P+ +
Sbjct: 473 KKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVM 532

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT +ID F K+G  ++A +++S M E+  K +VVT S L++GY +++ M  A  ++ +M
Sbjct: 533 TFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKM 592

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +  + P++V Y+ LI G C  G M  A       +D+  LP++ T+     G+ K
Sbjct: 593 LDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEK 648



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D A+ L      R   P+I  Y++ +   C    + EA + F++++   L P+  
Sbjct: 336 KKGRSDKAINLLNFFNVR---PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCF 392

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +TI+I  +CK G ++ A     +ML+ G   +V TY+ LI+   KS +M  A  + + M
Sbjct: 393 CYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRM 452

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P++V+++ LIDG  K+G +++A           + PD VTY  LI      G P
Sbjct: 453 MLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYP 512

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  +   ++R G+ PD +  + + D
Sbjct: 513 NEAKDILHELIRRGLSPDVMTFTDVID 539



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 85/153 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI   + + A  +  +L  RGL PD++T+  +I G+      +EA  ++  ++   +KP+
Sbjct: 506 LIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPD 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + L++ +C+  RMD+A  +F KML+ G K ++V Y+ LI G+  + NM +A ++  
Sbjct: 566 VVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVA 625

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            M ++   PNI ++     G  K+ +    L+A
Sbjct: 626 MMIDDGFLPNITTHRAFALGFEKKWVKNPELHA 658



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 3/199 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   LD A  +   +   G+  +    +  I  YC+   +    ++  ++    +K +
Sbjct: 229 LLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKAD 288

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I +TI+IDA CK   +  AT +  KM+  G   + V+ S +IDGY K      A ++  
Sbjct: 289 VIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLN 348

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                N+ PNI  YS  +  LCK G M EA   F    +  L PD   Y I+I GYCK G
Sbjct: 349 FF---NVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVG 405

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +A Q    ML+ GI P
Sbjct: 406 DINKAFQYLGEMLKFGITP 424



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 2/180 (1%)

Query: 14  LFGQLTDRGL-EPDIIT-YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           LF  + D G    D+ T Y+ ++  Y + +++  A+ L  ++  + + P+      L+ A
Sbjct: 169 LFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKA 228

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             +  ++D A  +   M   G   N    S  I+ Y    N++S + +  EM    I  +
Sbjct: 229 LLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKAD 288

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           +++Y+I+ID LCK   ++ A       +   +  D V+ + +I GYCK GR  +A+ L +
Sbjct: 289 VIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLN 348


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 116/206 (56%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  ++   +L  ++T RG++PDI TYN ++ G C++ +LD+A++L+++     L  N  T
Sbjct: 536 EGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHT 595

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           + I+++ +CK  R++D   +F+++L K  + N + Y+ +I  + ++ N+ +A  + E M 
Sbjct: 596 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 655

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I PN  +YS LI G+C  GL+E+A +          +P+VV Y  LI GYCK G+  
Sbjct: 656 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 715

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A   +  M+   I P+    + + D
Sbjct: 716 TAESTWLEMISFNIHPNKFTYTVMID 741



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 106/196 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF +L  + +E + I YN II  +C    +  A+QL E +    + PN  T++ LI   C
Sbjct: 615 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
             G ++DA  +  +M ++G   NVV Y+ LI GY K   M +A   + EM   NI PN  
Sbjct: 675 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 734

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+++IDG CK G ME+A        ++ ++PDVVTY +L  G+CKA     A ++ D M
Sbjct: 735 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 794

Query: 194 LRNGIMPDGLLLSTLA 209
              G+  D +  +TL 
Sbjct: 795 ATEGLPVDEITYTTLV 810



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 6/210 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+KL+ +    GL  +I TY  ++ GYC  NR+++   LF +L   +++ NSI + I
Sbjct: 574 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I A C+ G +  A  +   M  KG   N  TYS LI G      ++ A  + +EM +  
Sbjct: 634 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 693

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V Y+ LI G CK G M+ A   +   +  ++ P+  TY ++I GYCK G   +A 
Sbjct: 694 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKAN 753

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            L   M  +GI+PD      +  YN+ ++G
Sbjct: 754 NLLIKMKESGIVPD------VVTYNVLTNG 777



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 3/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    +   ++F ++   G  PD+ ++  +I   C   +++ A++LF K+  + + PN
Sbjct: 219 LVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPN 277

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I+  C+ GR+D+A  +  KM  KG + N+ TY  LI+G  K         V +
Sbjct: 278 VVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLD 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  +  +PN+V ++ LIDG CK G +E AL      +  ++ P  VT   L++G+CK+ 
Sbjct: 338 EMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 397

Query: 182 RPTEAMQLYDSMLRNG--IMPD 201
           +   A    + +L +G  I PD
Sbjct: 398 QIEHAENALEEILSSGLSIHPD 419



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 104/194 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A ++  ++ +RGL  D ITYN +I G+C+  +++   +L E++T   ++P+  T+  
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  G++DDA  ++ +    G  +N+ TY  +++GY K+  ++   +++ E+    
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N + Y+I+I   C+ G +  AL          +LP+  TY+ LI G C  G   +A 
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683

Query: 188 QLYDSMLRNGIMPD 201
            L D M + G +P+
Sbjct: 684 HLIDEMRKEGFVPN 697



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           A+ +F  L  +G  P + T N ++      N  ++  ++F  ++   C    P+  +FT 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC----PDVFSFTN 248

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+A CK G+M++A  +F KM + G   NVVTY+C+I+G  ++  + +AF++ E+M    
Sbjct: 249 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 308

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +Y  LI+GL K    ++  +     + +   P+VV +  LI GYCK G    A+
Sbjct: 309 VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGAL 368

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++ D M+   I P  + L +L
Sbjct: 369 KIKDVMISKNITPTSVTLYSL 389



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 96/171 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ AAL+L   +  +G+ P+  TY+++I G C++  +++A  L +++      PN + +T
Sbjct: 643 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 702

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +CK G+MD A   + +M+      N  TY+ +IDGY K  NM+ A ++  +M E+
Sbjct: 703 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 762

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            I P++V+Y++L +G CK   M+ A           L  D +TY  L+ G+
Sbjct: 763 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 100/194 (51%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K+    +A +    +  R   P  +    ++CG C   +  EA +L+ +L       
Sbjct: 427 WLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA 486

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T   LI   C  G++ +A+ +  +MLE+G   + +TY+ LI G+     ++  F + 
Sbjct: 487 SKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLR 546

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +  I P+I +Y+ L+ GLC  G +++A+  +     + L+ ++ TY I++ GYCKA
Sbjct: 547 EEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 606

Query: 181 GRPTEAMQLYDSML 194
            R  +   L++ +L
Sbjct: 607 NRIEDVENLFNELL 620



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL+A  +L+ +L ++G     +T N +I G C   +L EA ++ +++    L  + IT+ 
Sbjct: 469 HLEAT-ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 527

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  FC EG+++    +  +M ++G + ++ TY+ L+ G      +  A  +++E   +
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  NI +Y I+++G CK   +E+    F+  L   +  + + Y I+I+ +C+ G    A
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           +QL ++M   GI+P+    S+L
Sbjct: 648 LQLLENMKSKGILPNCATYSSL 669



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   LD A +L  ++T +G++P++ TY  +I G   LN  D+   + +++      PN
Sbjct: 288 LCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPN 347

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F  LID +CK G ++ A  +   M+ K      VT   L+ G+ KS  ++ A +  E
Sbjct: 348 VVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE 407

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+  + +S +  +   ++  LCK+     A       L  +  P  +   +L+ G CK G
Sbjct: 408 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467

Query: 182 RPTEAMQLYDSMLRNG 197
           +  EA +L+  +L  G
Sbjct: 468 KHLEATELWFRLLEKG 483



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 35/235 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK    D    +  ++   G  P+++ +N +I GYC +  ++ A+++ + +    + P 
Sbjct: 323 LIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN------VVTYSC------------- 102
           S+T   L+  FCK  +++ A     ++L  G   +      VV + C             
Sbjct: 383 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 442

Query: 103 ----------------LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                           L+ G  K      A +++  + E     + V+ + LI GLC  G
Sbjct: 443 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 502

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            + EA       L+  L  D +TY  LI G+C  G+     +L + M + GI PD
Sbjct: 503 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 557



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 4/207 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR---LDEAVQLFEKLTCVQLKPNSI 63
           H++ A  LFG  +  G       ++ +I  Y +  R      AV +F  L      P+  
Sbjct: 151 HIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLK 210

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   L+ +  K    +    +F +++ +G   +V +++ +I+   K   M++A +++ +M
Sbjct: 211 TCNFLLSSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKM 269

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISPN+V+Y+ +I+GLC+ G ++ A           + P++ TY  LI G  K    
Sbjct: 270 EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 329

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +   + D M+ +G  P+ ++ + L D
Sbjct: 330 DKVNHVLDEMIGSGFNPNVVVFNNLID 356


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 108/192 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +LD A K   +L   G+ PD++TY+ +I  +    + D +++L E +    +KP+
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+  CKE +  DA  +   M   G   NVVTY+ ++DG  KS  M     VYE
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++  SP++V+YSI+++GL K G+++ A+  F     +   PD   Y+++I   C+AG
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453

Query: 182 RPTEAMQLYDSM 193
           +  EA  +Y  M
Sbjct: 454 KLEEACGMYHGM 465



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 36/257 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---------- 51
           L K   LD ALK   ++   G+ P+ +TY+ ++ G+     LD  ++ FE          
Sbjct: 203 LCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL 262

Query: 52  ---------------------KLTCVQLK-----PNSITFTILIDAFCKEGRMDDATMMF 85
                                + +  +L+     P+ +T+++LI+ F + G+ D +  + 
Sbjct: 263 EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELL 322

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M   G K +VVTYS LI+   K +  + AF + E M      PN+V+Y+ ++DGLCK 
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G M+E    +   L +   PDVVTY+I++ G  KAG    A++L++ +  +   PD    
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAY 442

Query: 206 STLADYNLQSSGSQEHC 222
           S +     ++   +E C
Sbjct: 443 SMVITSLCRAGKLEEAC 459



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 36/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D AL++  +     L  D+IT  TI+ G C  +RLD+A++  E++  + ++PN
Sbjct: 168 LSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPN 227

Query: 62  SITFTILI------------------------------------DAFCKEGRMDDATMMF 85
            +T++ L+                                    DA CK G +D A    
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            ++ + G   +VVTYS LI+ + ++    ++ ++ E+M  N + P++V+YS LI+ LCK 
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              ++A             P+VVTY  ++ G CK+G+  E  ++Y+ ML++   PD
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPD 403



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 2/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +       ++LF  L  RG+     TY  ++ G C     ++A++L  +L+ V   P 
Sbjct: 29  LFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV-YTPT 87

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  +I   C+  R+ DA  +  KM+E+    NV TY+ L++G  +S   K A +V++
Sbjct: 88  LFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N   PN ++Y  LI  L + G ++EAL          L  DV+T   ++ G CKA 
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  +A++  + M + G+ P+ +  S L  +  +  G  +  I
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLV-HGFRQHGELDRVI 248



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF----- 65
           A K+  ++ +  + P++ TY  ++ G C  N+   A ++F+++     KPN IT+     
Sbjct: 107 AYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQ 166

Query: 66  ------------------------------TILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                                         T ++   CK  R+DDA     +M + G + 
Sbjct: 167 HLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVY-EEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           N VTYS L+ G+ +   +      + EE      S    +Y   +D LCK G ++ A  +
Sbjct: 227 NEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKS 286

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                 + ++PDVVTY++LI  + +AG+   +++L + M RNG+ PD +  STL
Sbjct: 287 VEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTL 340



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 2/167 (1%)

Query: 46  AVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           A +L E+ +    +K +S  FT+L     +  +  +   +F+ +  +G      TY  ++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           DG   +     A ++  E+     +P +  Y+ +I GLC+   + +A       ++  ++
Sbjct: 62  DGLCGAGMANQALELVRELS-GVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           P+V TY IL+ G C++ +   A +++  M RNG  P+ +   TL  +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH 167



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 50/231 (21%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE     A +L   +   G  P+++TYN+++ G C   ++DE  +++E +   +  P
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T++I+++   K G +D A  +F                         + +KS+ +  
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLF-------------------------ELIKSSRE-- 435

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI--LIRGYC 178
                    P+  +YS++I  LC+ G +EEA   +H  ++  +  D +  A+  L+   C
Sbjct: 436 --------GPDAAAYSMVITSLCRAGKLEEACGMYH-GMEVTVAGDNICRALAGLVAALC 486

Query: 179 KAGRPTEAMQLYD-------SMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
            A R   A ++ +        M ++G   D  L+  + D+ L+S   +EH 
Sbjct: 487 DAERTDSARRIVEVASERGHRMTKSG---DTDLVKIVEDHLLES--KEEHA 532


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 109/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  H    L L  Q+   G+ P++ T N +I  +C LNR+  A  +  K+  +  +P+
Sbjct: 55  IAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPD 114

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TFT LI   C EG++ +A  +F KM+++G + NVVTY  LI+G  K  N  +A  +  
Sbjct: 115 PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 174

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N  P++V Y+ +ID LCK   + EA   F   +   + PD+ TY  L+   C   
Sbjct: 175 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 234

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  L + M+ + I+PD ++ ST+ D
Sbjct: 235 EWKHVTTLLNQMVNSKILPDVVIFSTVVD 263



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 115/213 (53%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  AL LF ++ D G +P+++TY T+I G C +     A++L   +     +P+ + 
Sbjct: 128 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 187

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T +ID+ CK+ ++ +A  +FS+M+ +G   ++ TY+ L+         K    +  +M 
Sbjct: 188 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 247

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            + I P++V +S ++D LCK G + EA       +   + PDVVTY  L+ G+C      
Sbjct: 248 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 307

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           EA++++D M+R G  PD +  +TL +   +  G
Sbjct: 308 EAVKVFDMMVRKGFAPDVISYTTLINAGKKDGG 340



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 115/236 (48%), Gaps = 34/236 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  LF Q+  +G+ PDI TY +++   C+L        L  ++   ++ P+
Sbjct: 195 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + F+ ++DA CKEG++ +A  +   M+++G + +VVTY+ L+DG+     M  A  V++
Sbjct: 255 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRG----------------------------------L 147
            M     +P+++SY+ LI+   K G                                  L
Sbjct: 315 MMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKL 374

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            E+     +  +++ ++P+VV ++ ++   CK G+  EA  + D M++ G+ P+ +
Sbjct: 375 FEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAV 430



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL  F +L      P I+ +  ++     +      + L  ++    + PN  T  I
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI++FC   R+  A  + +K+L+ G + +  T++ LI G      +  A  ++++M +  
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN+V+Y  LI+GLCK G    A+         +  PDVV Y  +I   CK  + TEA 
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L+  M+  GI PD    ++L 
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLV 227



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 93/187 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +  AA++L   +     +PD++ Y +II   C   ++ EA  LF ++    + P+
Sbjct: 160 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 219

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T L+ A C        T + ++M+      +VV +S ++D   K   +  A ++ +
Sbjct: 220 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 279

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  + P++V+Y+ L+DG C +  M+EA+  F   +     PDV++Y  LI    K G
Sbjct: 280 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339

Query: 182 RPTEAMQ 188
               ++Q
Sbjct: 340 GGLVSLQ 346



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 85/171 (49%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
            N LD+A+  F +L  +   P+ + F  L+ +  K         + ++M   G   NV T
Sbjct: 23  FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 82

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
            + LI+ +     +  AF V  ++ +    P+  +++ LI GLC  G + EAL+ F   +
Sbjct: 83  LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           D    P+VVTY  LI G CK G  + A++L  SM +    PD ++ +++ D
Sbjct: 143 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 193


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 110/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A     ++ + G+ PD  TYNT+I G+C   +L EA ++ +++    LKP+  
Sbjct: 220 KEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDIC 279

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   ++   C E + ++A  +  K  ++G   + VTY  LI GYFK +    A  ++EEM
Sbjct: 280 TLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEM 339

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P++VSY+ LI GLC  G  ++A+   +  L+  L+PD V+  I+I GYC  G  
Sbjct: 340 KKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMV 399

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q ++ M+ N   PD
Sbjct: 400 DKAFQFHNKMVGNSFKPD 417



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 108/197 (54%), Gaps = 1/197 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV-QLKPNSI 63
           E  +D A+++  ++    L PD++TYNT+I G        E  +L E++     ++PN++
Sbjct: 150 EGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAV 209

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++  F KEG++++A+    KM+E G   +  TY+ +I+G+ K+  +  AF + +EM
Sbjct: 210 THNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEM 269

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I + + ++  LC     EEA      A     + D VTY  LI GY K  + 
Sbjct: 270 ARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQE 329

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A++L++ M + GI+P
Sbjct: 330 DKALKLWEEMKKRGIVP 346



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 100/193 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A +L  +   RG   D +TY T+I GY    + D+A++L+E++    + P+ +++  L
Sbjct: 295 EEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPL 354

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C  G+ D A    +++LEKG   + V+ + +I GY     +  AF  + +M  N+ 
Sbjct: 355 IRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSF 414

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+I + +IL+ GLC+  ++E+A   F+  +      DVVTY  +I   CK GR  EA  
Sbjct: 415 KPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFD 474

Query: 189 LYDSMLRNGIMPD 201
           L   M      PD
Sbjct: 475 LMTDMEVKKFEPD 487



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 1/184 (0%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA-FCKEGRMDDATMM 84
           D+ TYNT++ G C   ++DEA+++ +++  ++L P+ +T+  LID  F   G  +   ++
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                  G + N VT++ ++  + K   +  A D   +M E+ +SP+  +Y+ +I+G CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G + EA           L PD+ T   ++   C   +P EA +L     + G + D + 
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 205 LSTL 208
             TL
Sbjct: 316 YGTL 319



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 12/202 (5%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+    +L ++GL PD ++ N II GYC    +D+A Q   K+     KP+  T  IL
Sbjct: 365 DQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNIL 424

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   C+   ++ A  +F+  + K    +VVTY+ +I    K   +  AFD+  +M     
Sbjct: 425 LRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKF 484

Query: 129 SPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDV------VTYAILIRG 176
            P+  +Y+ ++  L   G  EEA      L     A+  H           + Y+  I  
Sbjct: 485 EPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISD 544

Query: 177 YCKAGRPTEAMQLYDSMLRNGI 198
            C  G+  EAM+L+    + G+
Sbjct: 545 LCTQGKYKEAMKLFQESEQKGV 566



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +D A +   ++     +PDI T N ++ G C ++ L++A +LF      Q   + +T
Sbjct: 396 EGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVT 455

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  +I   CKEGR+D+A  + + M  K  + +  TY+ ++     +   + A     ++ 
Sbjct: 456 YNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLS 515

Query: 125 EN-------------NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
           E              + S +I+ YS  I  LC +G  +EA+  F  +    +  +  TY 
Sbjct: 516 ETGQAVKTHDTSQELDASSDIM-YSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYI 574

Query: 172 ILIRGYCK 179
            L+ G+ K
Sbjct: 575 KLMDGFLK 582



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 12/129 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L KE  LD A  L   +  +  EPD  TYN I+       R +EA +   KL        
Sbjct: 463 LCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVK 522

Query: 54  ---TCVQLKPNS-ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
              T  +L  +S I ++  I   C +G+  +A  +F +  +KG   N  TY  L+DG+ K
Sbjct: 523 THDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLK 582

Query: 110 SQNMKSAFD 118
            +   S  D
Sbjct: 583 RRKSISKVD 591



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           S ++ +Y+ L+ GLC  G ++EA+          L+PDVVTY  LI G  K    TE  +
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 189 LYDSML-RNGIMPDGLLLSTLADY 211
           L + M  R G+ P+ +  + +  +
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKW 217



 Score = 39.7 bits (91), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           DV TY  L++G C  G+  EA+++ D M    ++PD +  +TL D   +  GS E
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTE 190


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ AL+LF +   +G++PDI+ YN+++ G C    +  A+Q+  ++      P+
Sbjct: 335 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 394

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I+  CK G + DAT++ +  + KG   +V T++ LIDGY K   + SA  + E
Sbjct: 395 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 454

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I+P+ ++Y+ +++GLCK G + E    F   +     P+ +TY ILI  +C++ 
Sbjct: 455 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 514

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA ++   M + G+ PD +  +TL
Sbjct: 515 KMEEASKVIVKMSQEGLHPDAVSFNTL 541



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A+    ++ ++G  PD  TYNTII GYC ++ + EA +L +        P+
Sbjct: 265 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C EG ++ A  +F++   KG K ++V Y+ L+ G      +  A  V  
Sbjct: 325 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 384

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+I +Y+I+I+GLCK G + +A    + A+    LPDV T+  LI GYCK  
Sbjct: 385 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 444

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A+QL + M   GI PD +  +++
Sbjct: 445 KLDSALQLVERMWEYGIAPDTITYNSV 471



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 98/186 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TYNT+I G C  +   EA+    ++      P+  T+  +ID +CK   + +AT +
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
               + KG   + VTY  LI+G     +++ A +++ E     I P+IV Y+ L+ GLC 
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +GL+  AL   +   +    PD+ TY I+I G CK G  ++A  + +  +  G +PD   
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432

Query: 205 LSTLAD 210
            +TL D
Sbjct: 433 FNTLID 438



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 99/190 (52%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PD+ T+NT+I GYC   +LD A+QL E++    + P++IT+  +++  CK G++++
Sbjct: 424 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 483

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
               F +M+ KG   N +TY+ LI+ + +S  M+ A  V  +M +  + P+ VS++ LI 
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G +E A   F    +        T+  LI  +        A +++D ML  G   
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 603

Query: 201 DGLLLSTLAD 210
           D      L D
Sbjct: 604 DSYTYRVLID 613



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 106/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD+AL+L  ++ + G+ PD ITYN+++ G C   +++E  + F+++      PN I
Sbjct: 442 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 501

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+ FC+  +M++A+ +  KM ++G   + V+++ LI G+ ++ +++ A+ +++++
Sbjct: 502 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 561

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   S    +++ LI     +  M  A   F   L      D  TY +LI G CK    
Sbjct: 562 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 621

Query: 184 TEAMQLYDSMLRNGIMP 200
             A      M++ G +P
Sbjct: 622 DRAYMHLVEMIKKGFIP 638



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++   + F ++  +G  P+ ITYN +I  +C  N+++EA ++  K++   L P+
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 534

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +++F  LI  FC+ G ++ A ++F K+ EKG  A   T++ LI  +    NM  A  +++
Sbjct: 535 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 594

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       +  +Y +LIDG CK   ++ A       +    +P + T+  +I       
Sbjct: 595 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 654

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A+ +   M++ G++P+
Sbjct: 655 RVFQAVGIIHIMVKIGVVPE 674



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 40/210 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   L  RG     + Y T++CG  +     +A QLF+++    + PN   F  ++ 
Sbjct: 139 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 194

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G + +A ++  K++++G                                   +S 
Sbjct: 195 ALCKRGDVLEAGLLLGKVIQRG-----------------------------------MSI 219

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+I I GLC+ G + EA+      +  + +PDVVTY  LIRG CK   P EAM   
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVD-GMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 278

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M+  G +PD    +T+ D   + S  QE
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQE 308



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 86/161 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+  +++  GL PD +++NT+I G+C    L+ A  LF+KL        + TF  
Sbjct: 516 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 575

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI AF  +  M  A  +F +ML KG +A+  TY  LIDG  K+ N+  A+    EM +  
Sbjct: 576 LIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 635

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
             P++ ++  +I+ L     + +A+   H  +   ++P+VV
Sbjct: 636 FIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 5/201 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+  F ++      P    YN I+         D+A +++ ++    + P+  T TI
Sbjct: 66  LRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTI 125

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            + +FC   R   A     ++L   P    V Y  ++ G +   +   A  ++++M   +
Sbjct: 126 RLRSFCLTARPHIAL----RLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH 181

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +++ ++  LCKRG + EA       +   +  ++ TY I IRG C+AGR  EA+
Sbjct: 182 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 241

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L D M R   +PD +  +TL
Sbjct: 242 RLVDGM-RAYAVPDVVTYNTL 261



 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 45/98 (45%)

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y   I  Y ++  ++ A D +E M      P   +Y+ ++D L      ++A   +   L
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
              + PD+ T+ I +R +C   RP  A++L  ++   G
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 150


>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 2/202 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  ++ A  +F  +   G+ PDI +YN +I G+C +   D A+ LFE++ C ++ PN
Sbjct: 266 LVKE--VNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPN 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK G++  A  +  +M ++G   +++TYS L+D   K+     A  +  
Sbjct: 324 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLT 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ +  + PN+ +Y+ILI+GLCK G  E+A   F   L      +V TY ++I  +C  G
Sbjct: 384 KLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNG 443

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
              EA+ +   M  NG +P+ +
Sbjct: 444 MFGEALAMLSKMEENGCIPNAV 465



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 110/194 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A  +F  +  +G +P+++TY++++ GYC +  +++A  +F  +    + P+  
Sbjct: 231 KEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQ 290

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ ILI+ FCK    D A  +F +M  +    NVVTY+ LIDG  KS  +  A  + +EM
Sbjct: 291 SYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEM 350

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +    P+I++YS L+D LCK    ++A+       D  L P++ TY ILI G CK GRP
Sbjct: 351 HDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRP 410

Query: 184 TEAMQLYDSMLRNG 197
            +A  +++ +L  G
Sbjct: 411 EDAQNIFEDLLVKG 424



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 90/145 (62%), Gaps = 6/145 (4%)

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  FCKEG++ +A  +F+ M++KG K NVVTYS L+DGY   + +  A  ++  M +  +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAF---HCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           +P+I SY+ILI+G CK  + + A+  F   HC     ++P+VVTY  LI G CK+G+ + 
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHC---RKIIPNVVTYNSLIDGLCKSGKISY 342

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A++L D M   G  PD +  S+L D
Sbjct: 343 ALKLVDEMHDRGQPPDIITYSSLLD 367



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 107/191 (56%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DAA+ LF ++  R + P+++TYN++I G C   ++  A++L +++      P+ IT++ L
Sbjct: 306 DAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSL 365

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DA CK    D A  + +K+ ++G + N+ TY+ LI+G  K    + A +++E++     
Sbjct: 366 LDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGY 425

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           + N+ +Y+++I   C  G+  EAL       +N  +P+ VTY I+IR         +A +
Sbjct: 426 NINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEK 485

Query: 189 LYDSMLRNGIM 199
           L   M+  G++
Sbjct: 486 LLLEMITRGLL 496



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 83/150 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  ALKL  ++ DRG  PDIITY++++   C  +  D+A+ L  KL    L+PN
Sbjct: 334 LCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPN 393

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+TILI+  CK GR +DA  +F  +L KG   NV TY+ +I  +  +     A  +  
Sbjct: 394 MYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLS 453

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           +M EN   PN V+Y I+I  L  +   ++A
Sbjct: 454 KMEENGCIPNAVTYEIIIRSLFDKDENDKA 483


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 40/244 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DAA KLF +++++G  PD +TY T++   C   ++D+A +L  +      KP+
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPS 243

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LID  CKEGR++ A  +  +M++ G   NVV+YSC+I+    S N++ AF ++ 
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFA 303

Query: 122 EM----CENNI-------------------------------SPNIVSYSILIDGLCKRG 146
           +M    C+ NI                                PN+V+Y+ LI GLC  G
Sbjct: 304 QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 363

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +EEAL        +  LP+V TY+ILI G+ K+G    A + ++ M+ +G  P+ +  +
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 423

Query: 207 TLAD 210
            + D
Sbjct: 424 CMVD 427



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 121/246 (49%), Gaps = 39/246 (15%)

Query: 2   LIKECHLDA----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C +      AL L+  +   G EP+++ YNT+I G CS   L+EA+Q+ +++    
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             PN  T++ILID F K G +  A+  +++M+  G + NVVTY+C++D   K+     A 
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQAN 439

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-----HCALDN----------- 161
            + E+M     +PN ++++  I GLC  G +E A+        H  L N           
Sbjct: 440 SLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499

Query: 162 -------------------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
                              +L P++VTY  ++ G+ +AG   EA+QL+   L  G  PD 
Sbjct: 500 FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559

Query: 203 LLLSTL 208
           +  +T+
Sbjct: 560 ITYNTM 565



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 100/190 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A + + ++   G  P+++TY  ++   C  +  D+A  L EK+T     PN++
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTM 455

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF   I   C  GR++ A  +  +M   G   N+ TY+ L+D  F+    + AF +++E+
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N+ PN+V+Y+ ++ G  + G+M EAL  F  AL     PD +TY  +I  YCK G+ 
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 184 TEAMQLYDSM 193
             A QL + +
Sbjct: 576 KIAAQLVERV 585



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 30/239 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ E        L+  +   GL P++ TYN ++   C  +R+D A +LF +++     P+
Sbjct: 154 LLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPD 213

Query: 62  SITFTILIDAFCKEGRMDDAT------------------------------MMFSKMLEK 91
           ++T+T ++ + CK G++DDA                                +  +M++ 
Sbjct: 214 AVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   NVV+YSC+I+    S N++ AF ++ +M       NI +++ LI G   RG + EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L  +   + +   P+VV Y  LI G C  G   EA+Q+ D M R+G +P+    S L D
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A+KL G++ D G++P++++Y+ II   C    ++ A  LF ++       N  
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI      G++ +A  ++  M++ G + NVV Y+ LI G   + +++ A  V ++M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN+ +YSILIDG  K G +  A   ++  + +   P+VVTY  ++   CK    
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L + M   G  P+ +  +T 
Sbjct: 436 DQANSLVEKMTLEGCTPNTMTFNTF 460



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 1/192 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+KL  ++   G  P+I TYN ++     +N+ +EA  LF+++    L+PN +T+ 
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE- 125
            ++  F + G M +A  +F K L +G   + +TY+ +I  Y K   +K A  + E +   
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P+I++Y+ LI G C    +EEA+     A++  + P+  T+  L+R +  +     
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648

Query: 186 AMQLYDSMLRNG 197
            + + D +LR G
Sbjct: 649 PIHILDDILRKG 660



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 1/202 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K    D A  L  ++T  G  P+ +T+NT I G C   R++ A++L E++      P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+  L+DA  +  + ++A  +F ++  +  + N+VTY+ ++ G+ ++  M  A  ++
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLME-EALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +      +P+ ++Y+ +I   CK+G ++  A      +      PD++TY  LI G C 
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACN 607

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
                EAM   D  +  GI P+
Sbjct: 608 WMNIEEAMAFLDKAINQGICPN 629



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 5/200 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +EC +D    +  Q+   G+      +  II GY  +   ++A+++F ++     KP 
Sbjct: 84  LGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPT 143

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+DA   E +      +++ M + G   NV TY+ L+    K+  + +A  ++ 
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ V+Y+ ++  LCK G +++A       L     P V  Y  LI G CK G
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR-----ELAGRFKPSVPVYNALIDGMCKEG 258

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A++L   M+ NG+ P+
Sbjct: 259 RIEVAIKLLGEMMDNGVDPN 278



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 66/146 (45%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ++I+   +E  MD    +  +M   G       + C+I+GY +  + + A  ++  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P +  Y+ L+D L      +     +     + L+P+V TY IL++  CK  R 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             A +L+  M   G  PD +  +T+ 
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMV 221


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ AL+LF +   +G++PDI+ YN+++ G C    +  A+Q+  ++      P+
Sbjct: 336 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I+  CK G + DAT++ +  + KG   +V T++ LIDGY K   + SA  + E
Sbjct: 396 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 455

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I+P+ ++Y+ +++GLCK G + E    F   +     P+ +TY ILI  +C++ 
Sbjct: 456 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 515

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA ++   M + G+ PD +  +TL
Sbjct: 516 KMEEASKVIVKMSQEGLHPDAVSFNTL 542



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A+    ++ ++G  PD  TYNTII GYC ++ + EA +L +        P+
Sbjct: 266 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C EG ++ A  +F++   KG K ++V Y+ L+ G      +  A  V  
Sbjct: 326 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+I +Y+I+I+GLCK G + +A    + A+    LPDV T+  LI GYCK  
Sbjct: 386 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 445

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A+QL + M   GI PD +  +++
Sbjct: 446 KLDSALQLVERMWEYGIAPDTITYNSV 472



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 98/186 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TYNT+I G C  +   EA+    ++      P+  T+  +ID +CK   + +AT +
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
               + KG   + VTY  LI+G     +++ A +++ E     I P+IV Y+ L+ GLC 
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +GL+  AL   +   +    PD+ TY I+I G CK G  ++A  + +  +  G +PD   
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433

Query: 205 LSTLAD 210
            +TL D
Sbjct: 434 FNTLID 439



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 99/190 (52%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PD+ T+NT+I GYC   +LD A+QL E++    + P++IT+  +++  CK G++++
Sbjct: 425 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 484

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
               F +M+ KG   N +TY+ LI+ + +S  M+ A  V  +M +  + P+ VS++ LI 
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G +E A   F    +        T+  LI  +        A +++D ML  G   
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 604

Query: 201 DGLLLSTLAD 210
           D      L D
Sbjct: 605 DSYTYRVLID 614



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 106/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD+AL+L  ++ + G+ PD ITYN+++ G C   +++E  + F+++      PN I
Sbjct: 443 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 502

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+ FC+  +M++A+ +  KM ++G   + V+++ LI G+ ++ +++ A+ +++++
Sbjct: 503 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 562

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   S    +++ LI     +  M  A   F   L      D  TY +LI G CK    
Sbjct: 563 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 622

Query: 184 TEAMQLYDSMLRNGIMP 200
             A      M++ G +P
Sbjct: 623 DRAYMHLVEMIKKGFIP 639



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++   + F ++  +G  P+ ITYN +I  +C  N+++EA ++  K++   L P+
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +++F  LI  FC+ G ++ A ++F K+ EKG  A   T++ LI  +    NM  A  +++
Sbjct: 536 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 595

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       +  +Y +LIDG CK   ++ A       +    +P + T+  +I       
Sbjct: 596 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 655

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A+ +   M++ G++P+
Sbjct: 656 RVFQAVGIIHIMVKIGVVPE 675



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 40/210 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   L  RG     + Y T++CG  +     +A QLF+++    + PN   F  ++ 
Sbjct: 140 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 195

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G + +A ++  K++++G                                   +S 
Sbjct: 196 ALCKRGDVLEAGLLLGKVIQRG-----------------------------------MSI 220

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+I I GLC+ G + EA+      +  + +PDVVTY  LIRG CK   P EAM   
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVD-GMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 279

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M+  G +PD    +T+ D   + S  QE
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQE 309



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 86/161 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+  +++  GL PD +++NT+I G+C    L+ A  LF+KL        + TF  
Sbjct: 517 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 576

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI AF  +  M  A  +F +ML KG +A+  TY  LIDG  K+ N+  A+    EM +  
Sbjct: 577 LIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 636

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
             P++ ++  +I+ L     + +A+   H  +   ++P+VV
Sbjct: 637 FIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 5/201 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+  F ++      P    YN I+         D+A +++ ++    + P+  T TI
Sbjct: 67  LRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTI 126

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            + +FC   R   A     ++L   P    V Y  ++ G +   +   A  ++++M   +
Sbjct: 127 RLRSFCLTARPHIAL----RLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH 182

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+ +++ ++  LCKRG + EA       +   +  ++ TY I IRG C+AGR  EA+
Sbjct: 183 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 242

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L D M R   +PD +  +TL
Sbjct: 243 RLVDGM-RAYAVPDVVTYNTL 262



 Score = 43.5 bits (101), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 45/98 (45%)

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y   I  Y ++  ++ A D +E M      P   +Y+ ++D L      ++A   +   L
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
              + PD+ T+ I +R +C   RP  A++L  ++   G
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 151


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 122/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE ++D+AL ++ ++ + G+ P+++TY ++I G+C  NR+D A++  +++    L+ +
Sbjct: 579 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 638

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++ LID FCK   M+ A  +F ++LE G   N + Y+ +I G+    NM++A   Y+
Sbjct: 639 VTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYK 698

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + I  ++ +Y+ LIDGL K G +  A   +   L   ++PD++T+ +L+ G C  G
Sbjct: 699 KMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 758

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A ++ + M R  + P  L+ +TL
Sbjct: 759 QLENARKILEEMDRKNMTPSVLIYNTL 785



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 1/206 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K    + A KLF +  D G+  +I TYN ++   C   ++DEA  L + +    + PN 
Sbjct: 406 LKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNV 464

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  +I   C++G MD A+ +FS ML +  K NVVTYS LIDG FK  + + A D++++
Sbjct: 465 VSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQ 524

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   NI+P   +++ +I+GLCK G M EA       L+   +P  +TY  ++ G+ K G 
Sbjct: 525 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 584

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
              A+ +Y  M   G+ P+ +  ++L
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSL 610



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 111/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK   ++ ++GLE D+  Y+ +I G+C    ++ A  LF +L  V L PN I
Sbjct: 616 KSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI 675

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I  F     M+ A + + KM+      ++ TY+ LIDG  K   +  A D+Y EM
Sbjct: 676 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 735

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+I+++ +L++GLC +G +E A          ++ P V+ Y  LI GY + G  
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 795

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            EA  L+D ML  G++PD +    L +   +   S
Sbjct: 796 KEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K   +D A  L   + ++G+ P++++YN +I G+C    +D A  +F  +    LKP
Sbjct: 438 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 497

Query: 61  NSITFTILID-----------------------------------AFCKEGRMDDATMMF 85
           N +T++ILID                                     CK G+M +A    
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
              LE+G   + +TY+ ++DG+ K  N+ SA  VY EMCE  +SPN+V+Y+ LI+G CK 
Sbjct: 558 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 617

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
             ++ AL       +  L  DV  Y+ LI G+CK      A  L+  +L  G+ P+ ++ 
Sbjct: 618 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVY 677

Query: 206 STL 208
           +++
Sbjct: 678 NSM 680



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A        + G  P  +TYN+I+ G+     +D A+ ++ ++    + PN
Sbjct: 544 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 603

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI+ FCK  R+D A     +M EKG + +V  YS LIDG+ K ++M+SA D++ 
Sbjct: 604 VVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF 663

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E  +SPN + Y+ +I G      ME AL  +   +++ +  D+ TY  LI G  K G
Sbjct: 664 ELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEG 723

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R   A  LY  ML  GI+PD +    L +
Sbjct: 724 RLVFASDLYMEMLSKGIVPDIITFHVLVN 752



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 34/240 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP---- 60
           + +LD+AL LF ++T+ GL P+ +TY+ +I G C+   +++A +L+ ++    + P    
Sbjct: 338 QGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 397

Query: 61  ------------------------------NSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                         N  T+ I++   CK G+MD+A  +   M+ 
Sbjct: 398 VNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVN 457

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           +G   NVV+Y+ +I G+ +  NM  A  V+ +M   ++ PN+V+YSILIDG  K+G  E+
Sbjct: 458 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AL  F   L  ++ P   T+  +I G CK G+ +EA     + L  G +P  +  +++ D
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 577



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 122/218 (55%), Gaps = 1/218 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + + ++  AL+L  ++ + G   +++   +++ GYC+   LD A+ LF K+T   L PN 
Sbjct: 301 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 360

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+++LI+  C  G ++ A+ ++++M   G   +V   + L+ GY K+   + A  +++E
Sbjct: 361 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 420

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             +  ++ NI +Y+I++  LCK G M+EA       ++  ++P+VV+Y  +I G+C+ G 
Sbjct: 421 AVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 479

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A  ++  ML   + P+ +  S L D N +   S++
Sbjct: 480 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 103/196 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  ++ A + F +  +RG++ D   Y+ II   C     +  ++L E++      P+ 
Sbjct: 231 LKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSE 290

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TFT +I A   +G M +A  +  +M+  G   N+V  + L+ GY    N+ SA +++ +
Sbjct: 291 ATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK 350

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + E+ + PN V+YS+LI+G C  G +E+A   +     N + P V     L+RGY KA  
Sbjct: 351 ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 410

Query: 183 PTEAMQLYDSMLRNGI 198
             EA +L+D  +  G+
Sbjct: 411 WEEASKLFDEAVDCGV 426



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +     L+ ++  RG+  D  T + ++       R++EA + F +     +K +
Sbjct: 195 LVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD 254

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  ++I+I A CK+   +    +  +M E+G   +  T++ +I       NM  A  + E
Sbjct: 255 AGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE 314

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       N+V  + L+ G C +G ++ AL  F+   ++ L P+ VTY++LI G C +G
Sbjct: 315 EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSG 374

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A +LY  M  NGI P    +++L
Sbjct: 375 NIEKASELYTQMKLNGIPPSVFNVNSL 401



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 65/108 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  L  A  L+ ++  +G+ PDIIT++ ++ G C+  +L+ A ++ E++    + P+
Sbjct: 719 LLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPS 778

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
            + +  LI  + +EG + +A  +  +ML++G   + VTY  LI+G FK
Sbjct: 779 VLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 1/185 (0%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
            E D   +N ++  Y   NR++ A+  F  + C  + P      IL+ A  +   + +  
Sbjct: 146 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +++KM+ +G   +  T   ++    K   ++ A + + E  E  +  +  +YSI+I  +
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK+      L       +   +P   T+  +I      G   EA++L + M+  G  P  
Sbjct: 266 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG-KPMN 324

Query: 203 LLLST 207
           L+++T
Sbjct: 325 LVVAT 329


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 118/205 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+KL+ ++   G +P+++TY T++ GY +    D A  L +++    +  N  
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDY 507

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +LI+  C   R+ +   M    + +G    ++TY+ +I+G+ K+  M SAF VY++M
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PNI++Y+  IDG C+ G  + AL   +      L PD+V Y  LI G+C+ G  
Sbjct: 568 REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNM 627

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A+QL   +L++G+ P+ ++ ++L
Sbjct: 628 SHALQLLVILLKDGLAPNTVVYNSL 652



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 36/235 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ +     A+ LF ++ D GL PD+ TYN +I  +C  ++L EA+ LF+++    +KP+
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+  +CK+G MD+A  ++S+M  +G K NVVTY  L+ GY   ++  +A+ + +
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 122 EMCENNISPNIVSYSILIDGLC-----------------------------------KRG 146
           EM +N +S N  +Y++LI+G+C                                   K G
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +M  A   +    +  L P+++TY   I GYC+ G    A+++ + + R G+ PD
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPD 610



 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 101/193 (52%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D ALK+   +  RGL+PDI+ YN +I G+C    +  A+QL   L    L PN++ +  L
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  +     M + +  +  M++ G  A+  TY+ LIDG+ K  N+  A ++Y EM     
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+  +++ L  GLC+ G ++ A           + P+V  Y +LI GY +  +  EA +
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772

Query: 189 LYDSMLRNGIMPD 201
           L+D ML  GI PD
Sbjct: 773 LHDEMLNMGIQPD 785



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K   + +A  ++ Q+ ++GL P+IITY + I GYC     D A+++   +    L+P+
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPD 610

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  LI+ FC+EG M  A  +   +L+ G   N V Y+ LI GY     MK     YE
Sbjct: 611 IVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYE 670

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +  I  +  +Y+ LIDG  K G +  AL  +   +    +PD  T+  L  G C++G
Sbjct: 671 SMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSG 730

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
               A +L + M R  + P+  + + L +  L+    QE
Sbjct: 731 DIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQE 769



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 3/208 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M+ + C +D  LK F      G  P ++TYN+II G+     +  A  +++++    L P
Sbjct: 518 MVDRVCEVDGMLKSF---MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPP 574

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N IT+T  ID +C+ G  D A  M + +  +G + ++V Y+ LI+G+ +  NM  A  + 
Sbjct: 575 NIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL 634

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             + ++ ++PN V Y+ LI G     +M+E    +   +   ++ D  TY  LI G+ K 
Sbjct: 635 VILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKD 694

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G    A++LY  M+  G +PD    + L
Sbjct: 695 GNVAFALELYSEMMAKGYIPDAFTFTAL 722



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 104/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I +   D A  L  ++   G+  +  TYN +I G C ++R+ E   + +        P  
Sbjct: 482 IAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTM 541

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +I+ F K G M  A  ++ +M EKG   N++TY+  IDGY ++     A  +  +
Sbjct: 542 MTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLND 601

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +    + P+IV+Y+ LI+G C+ G M  AL      L + L P+ V Y  LI GY     
Sbjct: 602 VRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNM 661

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             E  + Y+SM++ GI+ D    +TL D
Sbjct: 662 MKEVSKFYESMIKGGIVADTSTYTTLID 689



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 95/171 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++  AL+L   L   GL P+ + YN++I GY +LN + E  + +E +    +  ++ 
Sbjct: 623 QEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTS 682

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T LID F K+G +  A  ++S+M+ KG   +  T++ L  G  +S ++  A  + EEM
Sbjct: 683 TYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
              ++ PN+  Y++LI+G  +   ++EA       L+  + PD  TY IL+
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 34/232 (14%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE   + A++LF ++    ++PD   Y   I   C L     A+++  ++  V      
Sbjct: 203 LKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD 262

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  ++D   K GRM++A  +  +M + G K +V+  + L+ GY   Q + +A ++++E
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 123 MCENNISPNIVSYSILIDG------------LCK------------------RGLMEEAL 152
             ++ I P  V Y +LI G            LC+                  +GL+ +  
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382

Query: 153 YAFHCALDNHL----LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +     L   +    LPDV TY  LI  +C+A +  EA+ L+D M + G+ P
Sbjct: 383 WKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 36/233 (15%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE--------- 51
           +L+K   ++ AL++  ++ D G + D+I   T++ GYC    +  A+ LF+         
Sbjct: 271 VLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330

Query: 52  --------------------------KLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
                                     ++T   L P++   ++++     + R  DA  +F
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M + G   +V TY+ LI  + ++  ++ A ++++ M +  + P+I +Y+ L+ G CK+
Sbjct: 391 EEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           G M+EA+  +         P+VVTY  L+RGY        A  L D M +NG+
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 93/196 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF ++  RG   D   ++ ++         ++AV+LF+++   ++ P+   + + I 
Sbjct: 176 ALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAIT 235

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G    A  M  +M E G      TY  ++D   K+  M+ A  V +EM +     
Sbjct: 236 ALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKM 295

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +++  + L+ G C R  +  AL  F   L + ++P  V Y +LIRG  + G   +A +L 
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355

Query: 191 DSMLRNGIMPDGLLLS 206
             M   G++P    LS
Sbjct: 356 RQMTGQGLLPSTFELS 371



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AA   +  +  RG+ PDI +   ++      +   +A+ LF ++     + ++  F  L+
Sbjct: 140 AATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALM 199

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A  KEG  +DA  +F +M       +   Y+  I    K  +   A  +  EM E    
Sbjct: 200 SACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
               +Y  ++D L K G MEEAL       D     DV+    L+RGYC       A+ L
Sbjct: 260 TCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNL 319

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           +   L++GI+P  ++   L
Sbjct: 320 FKETLKDGIVPTKVMYGVL 338



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 57/105 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  AL+L+ ++  +G  PD  T+  +  G C    +D A +L E++  + ++PN  
Sbjct: 693 KDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF 752

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            + +LI+ + ++ ++ +A  +  +ML  G + +  TY  L+   F
Sbjct: 753 IYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797



 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D A KL  ++    + P++  YN +I GY    +L EA +L +++  + ++P+
Sbjct: 726 LCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPD 785

Query: 62  SITFTILI 69
             T+ IL+
Sbjct: 786 DTTYDILV 793



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 1/143 (0%)

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           AT  ++ M+ +G   ++ + + L+    +  + K A  ++ EM       +   +  L+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
              K G+ E+A+  F       + PD   YA+ I   CK G    A+++   M   G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 201 DGLLLSTLADYNLQSSGSQEHCI 223
                 T+ D  L  +G  E  +
Sbjct: 261 CDFTYRTMVDV-LVKTGRMEEAL 282


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 108/192 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +LD A K   +L   G+ PD++TY+ +I  +    + D +++L E +    +KP+
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+  CKE +  DA  +   M   G   NVVTY+ ++DG  KS  M     VYE
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++  SP++V+YSI+++GL K G+++ A+  F     +   PD   Y+++I   C+AG
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453

Query: 182 RPTEAMQLYDSM 193
           +  EA  +Y  M
Sbjct: 454 KLEEACGMYHGM 465



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 36/257 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---------- 51
           L K   LD ALK   ++   G+ P+ +TY+ ++ G+     LD  ++ FE          
Sbjct: 203 LCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL 262

Query: 52  ---------------------KLTCVQLK-----PNSITFTILIDAFCKEGRMDDATMMF 85
                                + +  +L+     P+ +T+++LI+ F + G+ D +  + 
Sbjct: 263 EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELL 322

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
             M   G K +VVTYS LI+   K +  + AF + E M      PN+V+Y+ ++DGLCK 
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G M+E    +   L +   PDVVTY+I++ G  KAG    A++L++ +  +   PD    
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAY 442

Query: 206 STLADYNLQSSGSQEHC 222
           S +     ++   +E C
Sbjct: 443 SMVITSLCRAGKLEEAC 459



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 36/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D AL++  +     L  D+IT  TI+ G C  +RLD+A++  E++  + ++PN
Sbjct: 168 LSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPN 227

Query: 62  SITFTILI------------------------------------DAFCKEGRMDDATMMF 85
            +T++ L+                                    DA CK G +D A    
Sbjct: 228 EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSV 287

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            ++ + G   +VVTYS LI+ + ++    ++ ++ E+M  N + P++V+YS LI+ LCK 
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              ++A             P+VVTY  ++ G CK+G+  E  ++Y+ ML++   PD
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPD 403



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 2/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +       ++LF  L  RG+     TY  ++ G C     ++A++L  +L+ V   P 
Sbjct: 29  LFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV-YTPT 87

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  +I   C+  R+ DA  +  KM+E+    NV TY+ L++G  +S   K A +V++
Sbjct: 88  VFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N   PN ++Y  LI  L + G ++EAL          L  DV+T   ++ G CKA 
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           R  +A++  + M + G+ P+ +  S L  +  +  G  +  I
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLV-HGFRQHGELDRVI 248



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF----- 65
           A K+  ++ +  + P++ TY  ++ G C  N+   A ++F+++     KPN IT+     
Sbjct: 107 AYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQ 166

Query: 66  ------------------------------TILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                                         T ++   CK  R+DDA     +M + G + 
Sbjct: 167 HLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVY-EEMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
           N VTYS L+ G+ +   +      + EE      S    +Y   +D LCK G ++ A  +
Sbjct: 227 NEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKS 286

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                 + ++PDVVTY++LI  + +AG+   +++L + M RNG+ PD +  STL
Sbjct: 287 VEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTL 340



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 2/167 (1%)

Query: 46  AVQLFEK-LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           A +L E+ +     K +S  FT+L     +  +  +   +F+ +  +G      TY  ++
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
           DG   +     A ++  E+     +P +  Y+ +I GLC+   + +A       ++  ++
Sbjct: 62  DGLCGAGMANQALELVRELS-GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           P+V TY IL+ G C++ +   A +++  M RNG  P+ +   TL  +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH 167



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 38/199 (19%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L KE     A +L   +   G  P+++TYN+++ G C   ++DE  +++E +   +  P
Sbjct: 343 VLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSP 402

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T++I+++   K G +D A  +F                         + +KS+ +  
Sbjct: 403 DVVTYSIIMNGLSKAGMLDSAVKLF-------------------------ELIKSSRE-- 435

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI--LIRGYC 178
                    P+  +YS++I  LC+ G +EEA   +H  ++  +  D +  A+  L+   C
Sbjct: 436 --------GPDAAAYSMVITSLCRAGKLEEACGMYH-GMEVTVAGDNICRALAGLVAALC 486

Query: 179 KAGRPTEAMQLYDSMLRNG 197
            A R   A ++ +     G
Sbjct: 487 DAKRTDSARRIVEVARERG 505


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 35/247 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +AA +LF  + D+G++ DI TYNT++   C   ++D A ++  ++    + PN +T++ 
Sbjct: 312 WEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYST 371

Query: 68  LIDAFCKEGRMDDATMMFSKM------LEK-----------------------------G 92
           +ID + K GR+DDA  MF++M      L++                             G
Sbjct: 372 MIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAG 431

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            + +VVTY+ L+ GY K         V+EEM    +SPN+++YS LID   K GL +EA+
Sbjct: 432 IRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAM 491

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
             F       L  DVV Y+ LI   CK G    ++ L D M + GI P+ +  +++ D  
Sbjct: 492 EVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF 551

Query: 213 LQSSGSQ 219
            +S+ +Q
Sbjct: 552 GRSASAQ 558



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 38/239 (15%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + A+K+F  +   GL P+++TYN +I  CG   +    + V++F+ +    ++P+ ITF 
Sbjct: 242 NEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV-EFKKVVEIFDGMLSNGVQPDRITFN 300

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+    + G  + A  +FS M++KG   ++ TY+ L+D   K   M  AF++  EM   
Sbjct: 301 SLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK 360

Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL------------------------YA----FHCA 158
           NI PN+V+YS +IDG  K G +++AL                        YA    F  A
Sbjct: 361 NILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQA 420

Query: 159 LD-------NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           LD         +  DVVTY  L+ GY K  R  E  ++++ M R  + P+ L  STL D
Sbjct: 421 LDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLID 479



 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 18/222 (8%)

Query: 7   HLDAALKLFGQLT-----DRGLEPDIITYNTIICG---YCSL-----NRLD--EAVQLFE 51
           H   AL+   Q+      D+ LE  ++ + + +CG   Y  L     NR D  +AV+ FE
Sbjct: 118 HTSVALEALQQVIQYGKDDKALENVLLNFESRLCGPDDYTFLLRELGNRGDSAKAVRCFE 177

Query: 52  KLTCVQLKPNSIT--FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
                +   N      + +I    + G+++ A  +F   L++G    V  +S LI  Y +
Sbjct: 178 FAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGR 237

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL-MEEALYAFHCALDNHLLPDVV 168
           S     A  V++ M  N + PN+V+Y+ +ID   K G+  ++ +  F   L N + PD +
Sbjct: 238 SGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRI 297

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           T+  L+    + G    A +L+ +M+  GI  D    +TL D
Sbjct: 298 TFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLD 339



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 65/115 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D   ++F ++    + P+++TY+T+I  Y       EA+++F +     LK + +
Sbjct: 448 KQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVV 507

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            ++ LIDA CK G ++ +  +  +M ++G + NVVTY+ +ID + +S + +   D
Sbjct: 508 LYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVD 562



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP- 60
           L K   +++++ L  ++T  G+ P+++TYN+II  +         V    + T +Q++  
Sbjct: 516 LCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESL 575

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +SI     I++   +   +    +F K+            +C      K Q +     V+
Sbjct: 576 SSIVVQEAIESQAADKEDNRIIEIFGKL--------AAEKACEAKNSGK-QEILCILGVF 626

Query: 121 EEMCENNISPNIVSYSILIDGLCKR 145
           ++M E  I PN+V++S +++  C R
Sbjct: 627 QKMHELKIKPNVVTFSAILNA-CSR 650


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 40/244 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +DAA KLF +++++G  PD +TY T++   C   ++D+A +L  +      KP+
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPS 243

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LID  CKEGR++ A  +  +M++ G   NVV+YSC+I+    S N++ AF ++ 
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFA 303

Query: 122 EM----CENNI-------------------------------SPNIVSYSILIDGLCKRG 146
           +M    C+ NI                                PN+V+Y+ LI GLC  G
Sbjct: 304 QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 363

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +EEAL        +  LP+V TY+ILI G+ K+G    A + ++ M+ +G  P+ +  +
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 423

Query: 207 TLAD 210
            + D
Sbjct: 424 CMVD 427



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 121/246 (49%), Gaps = 39/246 (15%)

Query: 2   LIKECHLDA----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C +      AL L+  +   G EP+++ YNT+I G CS   L+EA+Q+ +++    
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             PN  T++ILID F K G +  A+  +++M+  G + NVVTY+C++D   K+     A 
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQAN 439

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-----HCALDN----------- 161
            + E+M     +PN ++++  I GLC  G +E A+        H  L N           
Sbjct: 440 SLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499

Query: 162 -------------------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
                              +L P++VTY  ++ G+ +AG   EA+QL+   L  G  PD 
Sbjct: 500 FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559

Query: 203 LLLSTL 208
           +  +T+
Sbjct: 560 ITYNTM 565



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 100/190 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A + + ++   G  P+++TY  ++   C  +  D+A  L EK+T     PN+I
Sbjct: 396 KSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTI 455

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF   I   C  GR++ A  +  +M   G   N+ TY+ L+D  F+    + AF +++E+
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N+ PN+V+Y+ ++ G  + G+M EAL  F  AL     PD +TY  +I  YCK G+ 
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 184 TEAMQLYDSM 193
             A QL + +
Sbjct: 576 KIAAQLVERV 585



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 30/239 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ E        L+  +   GL P++ TYN ++   C  +R+D A +LF +++     P+
Sbjct: 154 LLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPD 213

Query: 62  SITFTILIDAFCKEGRMDDAT------------------------------MMFSKMLEK 91
           ++T+T ++ + CK G++DDA                                +  +M++ 
Sbjct: 214 AVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   NVV+YSC+I+    S N++ AF ++ +M       NI +++ LI G   RG + EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L  +   + +   P+VV Y  LI G C  G   EA+Q+ D M R+G +P+    S L D
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  LF Q+  RG + +I T+  +I G     +L EA+ L++ +     +PN + + 
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI   C  G +++A  +  +M   G   NV TYS LIDG+ KS ++  A + +  M  +
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+Y+ ++D LCK  + ++A             P+ +T+   I+G C  GR   A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           M+L + M  +G +P+    + L D
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLD 497



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  ++ A+KL G++ D G++P++++Y+ II   C    ++ A  LF ++       N  
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT LI      G++ +A  ++  M++ G + NVV Y+ LI G   + +++ A  V ++M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN+ +YSILIDG  K G +  A   ++  + +   P+VVTY  ++   CK    
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L + M   G  P+ +  +T 
Sbjct: 436 DQANSLVEKMTLEGCTPNTITFNTF 460



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 1/192 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+KL  ++   G  P+I TYN ++     +N+ +EA  LF+++    L+PN +T+ 
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE- 125
            ++  F + G M +A  +F K L +G   + +TY+ +I  Y K   +K A  + E +   
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               P+I++Y+ LI G C    +EEA+     A++  + P+  T+  L+R +  +     
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648

Query: 186 AMQLYDSMLRNG 197
            + + D +LR G
Sbjct: 649 PIHILDDILRKG 660



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 1/202 (0%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K    D A  L  ++T  G  P+ IT+NT I G C   R++ A++L E++      P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+  L+DA  +  + ++A  +F ++  +  + N+VTY+ ++ G+ ++  M  A  ++
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLME-EALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +      +P+ ++Y+ +I   CK+G ++  A      +      PD++TY  LI G C 
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACN 607

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
                EAM   D  +  GI P+
Sbjct: 608 WMNIEEAMAFLDKAINQGICPN 629



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 5/200 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +EC +D    +  Q+   G+      +  II GY  +   ++A+++F ++     KP 
Sbjct: 84  LGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPT 143

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+DA   E +      +++ M + G   NV TY+ L+    K+  + +A  ++ 
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFV 203

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P+ V+Y+ ++  LCK G +++A       L     P V  Y  LI G CK G
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR-----ELAGRFKPSVPVYNALIDGMCKEG 258

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A++L   M+ NG+ P+
Sbjct: 259 RIEVAIKLLGEMMDNGVDPN 278



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 66/146 (45%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ++I+   +E  MD    +  +M   G       + C+I+GY +  + + A  ++  +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P +  Y+ L+D L      +     +     + L+P+V TY IL++  CK  R 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             A +L+  M   G  PD +  +T+ 
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMV 221


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 119/211 (56%), Gaps = 3/211 (1%)

Query: 1   MLIKECH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           M++  C    +D+A  +F ++ ++GL+P++ITY+ ++ GY      + A  L++++    
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN 533

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           + P+  T  I+I+  CK GR  ++     K++++G     +TY+C+IDG+ K  ++ SA 
Sbjct: 534 IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSAL 593

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            VY EMC+  +SPN+ +Y+ LI+G CK   M+ AL       +  +  DV  Y  LI G+
Sbjct: 594 AVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGF 653

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           C+ G    A QL   +   G+ P+ ++ S++
Sbjct: 654 CRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684



 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 114/200 (57%), Gaps = 1/200 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A KLF +    G+  ++ TYN+++   C   ++ EA  ++EK+    ++P+ +++  +
Sbjct: 416 EEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C++G MD A  +F +MLEKG K N++TYS L+DGYFK  + + AF +Y+ M   NI
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P+  + +I+I+GLCK G   E+       +    +P  +TY  +I G+ K G    A+ 
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           +Y  M + G+ P+    + L
Sbjct: 595 VYTEMCKIGVSPNVFTYTNL 614



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 112/197 (56%), Gaps = 1/197 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++D A +++ Q+ ++ + P +   N++I GY      +EA +LF++     +  N  
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVF 434

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   CKEG+M +A  ++ KM+ KG + +VV+Y+ +I G+ +  +M SA  V+ EM
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  + PN+++YS+L+DG  K+G  E A   +      ++ P   T  I+I G CKAGR 
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554

Query: 184 TEAMQLYDSMLRNGIMP 200
           +E+      +++ G +P
Sbjct: 555 SESQDRLKKLVQEGFIP 571



 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 122/219 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +++AL ++ ++   G+ P++ TY  +I G+C  N +D A+++ +++    ++ +
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LID FC++G M +A+ + S++ E G   N V YS +I G+ K QNM++A  +++
Sbjct: 643 VTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHK 702

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I  ++  Y+ LI GL K G +  A   +   L   ++PD++TY++LI G C  G
Sbjct: 703 RMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKG 762

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   A ++ + M R  + P   + +TL   + +    QE
Sbjct: 763 QLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQE 801



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 2/193 (1%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +L   G  P  +TYN II G+     ++ A+ ++ ++  + + PN  T+T LI+ FCK  
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            MD A  +  +M  KG + +V  Y  LIDG+ +  +M +A  +  E+ E  +SPN V YS
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYS 682

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLP-DVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            +I G  K   ME AL+  H  + N  +P D+  Y  LI G  K G+   A +LY  ML 
Sbjct: 683 SMISGFRKLQNMEAALH-LHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLA 741

Query: 196 NGIMPDGLLLSTL 208
            GIMPD +  S L
Sbjct: 742 KGIMPDLITYSVL 754



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 105/196 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E  L+ A   F +  ++G+E D   Y+ +I   C       A+ L  ++      P+ 
Sbjct: 235 MREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHE 294

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + FT +I    K+G+M +A  +  +ML  G   NVV  + L+ GY K  ++ SA +++++
Sbjct: 295 VIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDK 354

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M EN I PN V+Y+++I+  CK G M++A   ++   +  + P V     LIRGY KA  
Sbjct: 355 MNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARS 414

Query: 183 PTEAMQLYDSMLRNGI 198
           P EA +L+D  +  GI
Sbjct: 415 PEEASKLFDEAVACGI 430



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 95/171 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  +L + GL P+ + Y+++I G+  L  ++ A+ L +++    +  +   +T LI 
Sbjct: 662 ASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLIS 721

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              KEG++  A+ ++++ML KG   +++TYS LI G      +++A  + E+M    ++P
Sbjct: 722 GLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP 781

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  Y+ LI G  K G ++EA    +  LD  L+PD  TY IL+ G  K G
Sbjct: 782 TVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 2/210 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   ++ A+  F  L ++ + P +   N  +      N + EA  ++ K+    +K + 
Sbjct: 165 VKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDC 224

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T +++I A  +EG++++A   F +   KG + +   YS +I+   K  +  +A  +  E
Sbjct: 225 ATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLRE 284

Query: 123 MCENNISPNIVSYSILIDGLC-KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           M +    P+ V ++ +I G+C K+G M EA+      L      +VV    L++GYCK G
Sbjct: 285 MRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQG 343

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
               A++L+D M  NGI P+ +  + + ++
Sbjct: 344 DLDSALELFDKMNENGICPNNVTYAVIIEW 373



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 79/140 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++AAL L  ++ + G+  D+  Y T+I G     +L  A +L+ ++    + P+ IT++
Sbjct: 693 NMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYS 752

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI   C +G++++A  +   M  K     V  Y+ LI G+FK  N++ AF ++ EM + 
Sbjct: 753 VLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDK 812

Query: 127 NISPNIVSYSILIDGLCKRG 146
            + P+  +Y IL++G  K G
Sbjct: 813 GLVPDDTTYDILVNGKVKDG 832



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 107/219 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  A  ++ ++  +G++ D  T + +I       +L+EA   F +     ++ +
Sbjct: 199 LVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELD 258

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  ++I+I+A CK+     A  +  +M +KG   + V ++ +I    K   M  A  V  
Sbjct: 259 ARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKG 318

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       N+V  + L+ G CK+G ++ AL  F    +N + P+ VTYA++I   CK G
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              +A ++Y+ M    I P    +++L    L++   +E
Sbjct: 379 NMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEE 417



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  L  A +L+ ++  +G+ PD+ITY+ +I G C+  +L+ A ++ E +    + P 
Sbjct: 723 LLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPT 782

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
              +  LI    KEG + +A  + ++ML+KG   +  TY  L++G  K  N+ S 
Sbjct: 783 VFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 27  IITYNTIICGYCS--LNRLDE----------AVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           I+T +T  CG     LNR               +L E    +  + +S  F  L++++ K
Sbjct: 107 ILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVK 166

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
             R++DA   F+ ++EK     +   +  +    K+  ++ A DVY +M    +  +  +
Sbjct: 167 TKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCAT 226

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
            S++I    + G +EEA   F  A +  +  D   Y+I+I   CK      A+ L   M 
Sbjct: 227 ISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMR 286

Query: 195 RNGIMPDGLLLSTL 208
             G +P  ++ + +
Sbjct: 287 DKGWVPHEVIFTRV 300


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 108/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A +  G++ ++G  PD  TYNTII GYC    L EA +L +        P+
Sbjct: 290 LCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPD 349

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C EG ++ A  +F++   K  K ++V Y+ L+ G  +   +  A  V  
Sbjct: 350 RVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMN 409

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+I +Y+I+I+GLCK G + +A    + A+    LPDV T+  LI GYCK  
Sbjct: 410 EMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRL 469

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A+QL + M   GI PD
Sbjct: 470 KLDSALQLVERMWTYGIAPD 489



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 116/207 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ AL+LF +   + L+PD++ YN+++ G C    +  A+Q+  ++      P+
Sbjct: 360 LCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPD 419

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I+  CK G + DA ++ +  + KG   +V T++ LIDGY K   + SA  + E
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 479

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I+P++++Y+ +++GLCK G  +E    F   +     P+ +TY ILI  +CK  
Sbjct: 480 RMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 539

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  +   M ++G++PD +  +TL
Sbjct: 540 QLEEASGVIVRMCQDGLVPDAVSFNTL 566



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 105/188 (55%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           + PD++TYNT++ G C  +++ EA Q   ++      P+  T+  +ID +CK G + +AT
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +    + KG   + VTY  LI+G     +++ A +++ E    ++ P++V Y+ L+ GL
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           C++GL+  AL   +  ++    PD+ TY I+I G CK G  ++A  + +  +  G +PD 
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455

Query: 203 LLLSTLAD 210
              +TL D
Sbjct: 456 FTFNTLID 463



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 102/187 (54%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F ++  +G  P+ ITYN +I  +C +N+L+EA  +  ++    L P++++F  LI  FC+
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G +D A ++F K+ EKG  A   T++ LI  Y    NM+ A  ++ EM      P++ +
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y IL+DGLCK   ++ A       +    +P + T+  ++       R +EA+ +   M+
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692

Query: 195 RNGIMPD 201
           R G++P+
Sbjct: 693 RMGVVPE 699



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 95/187 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++  ++ + G  PDI TYN II G C +  + +A  +          P+  TF  LID
Sbjct: 404 ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID 463

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK  ++D A  +  +M   G   +V+TY+ +++G  K+   K   + +EEM      P
Sbjct: 464 GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 523

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y+ILI+  CK   +EEA         + L+PD V++  LI G+C+ G    A  L+
Sbjct: 524 NAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLF 583

Query: 191 DSMLRNG 197
             +   G
Sbjct: 584 QKLDEKG 590



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 98/190 (51%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PD+ T+NT+I GYC   +LD A+QL E++    + P+ IT+  +++  CK G+  +
Sbjct: 449 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
               F +M+ KG + N +TY+ LI+ + K   ++ A  V   MC++ + P+ VS++ LI 
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G ++ A   F    +        T+ ILI  Y        A +++  M+  G  P
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628

Query: 201 DGLLLSTLAD 210
           D      L D
Sbjct: 629 DLYTYRILVD 638



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 107/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A +L      +G  PD +TY ++I G C+   ++ A++LF +     LKP+ +
Sbjct: 327 KSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLV 386

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  L+   C++G +  A  + ++M+E+G   ++ TY+ +I+G  K  N+  A  V  + 
Sbjct: 387 VYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA 446

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P++ +++ LIDG CKR  ++ AL          + PDV+TY  ++ G CKAG+ 
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            E  + ++ M+  G  P+ +  + L
Sbjct: 507 KEVNETFEEMILKGCRPNAITYNIL 531



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 1/191 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   L++RG +     Y T++ G  +      A  LF+++    + P+  TF  ++ 
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLH 219

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G + ++  + +K+L++G  AN  T +  I G  +   ++ A  + E M    ++P
Sbjct: 220 ALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAP 278

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ L+ GLCK   ++EA       ++   +PD  TY  +I GYCK+G   EA +L 
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338

Query: 191 DSMLRNGIMPD 201
              +  G +PD
Sbjct: 339 KDAVFKGFVPD 349



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 84/162 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A  +  ++   GL PD +++NT+I G+C    LD A  LF+KL        + TF 
Sbjct: 540 QLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 599

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI A+  +  M  A  +F +M+ KG K ++ TY  L+DG  K+ N+  A+    EM   
Sbjct: 600 ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISK 659

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
              P++ ++  +++ L     + EA+   H  +   ++P+VV
Sbjct: 660 GFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 36/249 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L AA+  F ++      P    YN I+    +    D+A +++ ++    + P++ T T
Sbjct: 86  RLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHT 145

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + + +FC  GR   A  +   + E+G  A    Y  ++ G +   +  +A  +++EM   
Sbjct: 146 VRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR 205

Query: 127 NISPNIVSYS-----------------------------------ILIDGLCKRGLMEEA 151
           ++ P++ +++                                   I I GLC+ G +EEA
Sbjct: 206 DVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA 265

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           + A    +  ++ PDVVTY  L+RG CK  +  EA Q    M+  G +PD    +T+ D 
Sbjct: 266 V-ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG 324

Query: 212 NLQSSGSQE 220
             +S   QE
Sbjct: 325 YCKSGMLQE 333



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 12/151 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  LF +L ++G      T+N +I  Y S   +  A ++F ++     KP+  T+ I
Sbjct: 576 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK   +D A    ++M+ KG   ++ T+  +++    +  +  A  +   M    
Sbjct: 636 LVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695

Query: 128 ISPNIV------------SYSILIDGLCKRG 146
           + P +V            +  IL++ L K+G
Sbjct: 696 VVPEVVDTILSTDKKEIAAPKILVEELMKKG 726



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 5/148 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A K+FG++  +G +PD+ TY  ++ G C    +D A     ++      P+  TF 
Sbjct: 610 NMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFG 669

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +++      R+ +A  +   M+  G    VV      D   K +       V E M + 
Sbjct: 670 RMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTD---KKEIAAPKILVEELMKKG 726

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYA 154
           +IS    +Y +L +G+    L  +A  A
Sbjct: 727 HISYR--AYEVLHEGVRDNKLTRKARKA 752


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 127/215 (59%), Gaps = 3/215 (1%)

Query: 2   LIKECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            +KE  L  A KL+ ++   +   PD++ YNT+I G+C   R++E +++F +++   L  
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N++T+T LI  F +    D+A M+F +M+  G   +++TY+ L+DG   + N+++A  V+
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCK 179
           E M + ++  +IV+Y+ +I+ LCK G +E+    F C+L    + P+VVTY  ++ G+C+
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCR 508

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
            G   EA  L+  M  +G +P+    +TL    L+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL L  ++    +E D++ YNTII G C    +D+A  LF K+    +KP+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI   C  GR  DA+ + S MLEK    ++V ++ LID + K   +  A  +Y+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344

Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM ++ +  P++V+Y+ LI G CK   +EE +  F       L+ + VTY  LI G+ +A
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                A  ++  M+ +G+ PD +  + L D
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  AL + G++   G  P I+T N+++ G+C  NR+ EAV L +++  +  +P+++
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFT L+    +  +  +A  +  +M+ KG + ++VTY  +I+G  K      A ++  +M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I  ++V Y+ +IDGLCK   M++A   F+      + PDV TY  LI   C  GR 
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A +L   ML   I PD +  + L D
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALID 328



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 4/207 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   +  A+ L  Q+ + G +PD +T+ T++ G    N+  EAV L E++     +P+ 
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +I+  CK G  D A  + +KM +   +A+VV Y+ +IDG  K ++M  AFD++ +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    I P++ +Y+ LI  LC  G   +A       L+ ++ PD+V +  LI  + K G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335

Query: 183 PTEAMQLYDSMLRNG-IMPDGLLLSTL 208
             EA +LYD M+++    PD +  +TL
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTL 362



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  H+D A  LF ++  +G++PD+ TYN +I   C+  R  +A +L   +    + P+
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + F  LIDAF KEG++ +A  ++ +M++ K    +VV Y+ LI G+ K + ++   +V+
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  +  N V+Y+ LI G  +    + A   F   + + + PD++TY IL+ G C  
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           G    A+ +++ M +  +  D +  +T+ +
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIE 469



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 4/214 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++  +++F +++ RGL  + +TY T+I G+      D A  +F+++    + P+ +T+ 
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           IL+D  C  G ++ A ++F  M ++  K ++VTY+ +I+   K+  ++  +D++  +   
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V+Y+ ++ G C++GL EEA   F    ++  LP+  TY  LIR   + G    +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550

Query: 187 MQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
            +L   M   G   D    GL+ + L D  L  S
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKS 584



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D  + L  Q+ + G+  ++ TY+  I  +C  ++L  A+ +  K+  +   P+ +T   
Sbjct: 91  FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++ FC   R+ +A  +  +M+E G + + VT++ L+ G F+      A  + E M    
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y  +I+GLCKRG  + AL   +      +  DVV Y  +I G CK     +A 
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270

Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
            L++ M   GI PD      L+S L +Y   S  S+
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++++  LD A+ LFG +      P I+ ++ ++     +N+ D  + L E++  + +  N
Sbjct: 50  VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++I I+ FC+  ++  A  +  KM++ G   ++VT + L++G+     +  A  + +
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E    P+ V+++ L+ GL +     EA+      +     PD+VTY  +I G CK G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            P  A+ L + M +  I  D ++ +T+ D
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIID 258



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%)

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++DDA  +F  M++  P  ++V +S L+    K         + E+M    IS N+ +YS
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           I I+  C+R  +  AL      +     P +VT   L+ G+C   R +EA+ L D M+  
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
           G  PD +  +TL     Q + + E
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASE 198



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++    LF  L+ +G++P+++TY T++ G+C     +EA  LF ++      PN
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           S T+  LI A  ++G    +  +  +M   G   +  T+  + +     +  KS  D+
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDM 588


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+KL  ++ DRG  PD++TYN ++ G C   RLDEA++    +     +PN I
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++ + C  GR  DA  + + ML KG   +VVT++ LI+   +   +  A D+ E+M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++   PN +SY+ L+ G CK   M+ A+      +     PD+VTY  ++   CK G+ 
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A+++ + +   G  P  +  +T+ D
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVID 457



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 114/201 (56%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+   L   G  PD+ITYN +I GYC    ++ A+ + ++++   + P+ +T+  ++ 
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C  G++  A  +  +ML++    +V+TY+ LI+   +   +  A  + +EM +   +P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y++L++G+CK G ++EA+   +    +   P+V+T+ I++R  C  GR  +A +L 
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             MLR G  P  +  + L ++
Sbjct: 333 ADMLRKGFSPSVVTFNILINF 353



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM + G + N ++Y+ L+ G+ K + M  A +  E M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ ++  LCK G +E+A+   +        P ++TY  +I G  KAG+ 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L D M    + PD +  S+L
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSL 490



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +G  P ++T+N +I   C    L  A+ + EK+     +PNS+++  L+ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCKE +MD A     +M+ +G   ++VTY+ ++    K   ++ A ++  ++     SP
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G   +A+          L PD +TY+ L+ G  + G+  EA++ +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 191 DSMLRNGIMPDGLLLSTL 208
               R GI P+ +  +++
Sbjct: 508 HEFERMGIRPNAVTFNSI 525



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+ +  ++   G +P+ ++YN ++ G+C   ++D A++  E++      P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++ A CK+G+++DA  + +++  KG    ++TY+ +IDG  K+     A  + +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ ++YS L+ GL + G ++EA+  FH      + P+ VT+  ++ G CK+ 
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A+     M+  G  P+
Sbjct: 534 QTDRAIDFLVFMINRGCKPN 553



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++   L+   K    +   G  PDII   T+I G+C L +  +A ++ E L      P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ ++I  +CK G +++A  +  +M       +VVTY+ ++     S  +K A +V +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + +  P++++Y+ILI+  C+   +  A+       D    PDVVTY +L+ G CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++  + M  +G  P+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPN 308



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 99/196 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A++   ++  RG  PDI+TYNT++   C   ++++AV++  +L+     P  I
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+   A  +  +M  K  K + +TYS L+ G  +   +  A   + E 
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN V+++ ++ GLCK    + A+      ++    P+  +Y ILI G    G  
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570

Query: 184 TEAMQLYDSMLRNGIM 199
            EA++L + +   G+M
Sbjct: 571 KEALELLNELCNKGLM 586



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL +  +++   + PD++TYNTI+   C   +L +A+++ +++      P+ I
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+A C++  +  A  +  +M ++G   +VVTY+ L++G  K   +  A     +M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+ G  
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ + + M ++G  P+ L
Sbjct: 361 GRAIDILEKMPQHGCQPNSL 380



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 108/201 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+++  ++  R   PD+ITY  +I   C  + +  A++L +++      P+ +T+ +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CKEGR+D+A    + M   G + NV+T++ ++     +     A  +  +M    
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++V+++ILI+ LC++GL+  A+        +   P+ ++Y  L+ G+CK  +   A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +  + M+  G  PD +  +T+
Sbjct: 400 EYLERMVSRGCYPDIVTYNTM 420



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 87/151 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A+++  QL+ +G  P +ITYNT+I G     +  +A++L +++    LKP+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT++ L+    +EG++D+A   F +    G + N VT++ ++ G  KS+    A D   
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M      PN  SY+ILI+GL   G+ +EAL
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEAL 574



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G +++       M+  G   +++  + LI G+ +    + A  + E +  +   P+++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           +Y+++I G CK G +  AL      LD   + PDVVTY  ++R  C +G+  +AM++ D 
Sbjct: 174 TYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSG 217
           ML+    PD +  + L +   + SG
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSG 254



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 48/91 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +D A+K F +    G+ P+ +T+N+I+ G C   + D A+     +     KPN
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             ++TILI+    EG   +A  + +++  KG
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKG 584


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+KL  ++ DRG  PD++TYN ++ G C   RLDEA++    +     +PN I
Sbjct: 251 RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  I++ + C  GR  DA  + + ML KG   +VVT++ LI+   +   +  A D+ E+M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++   PN +SY+ L+ G CK   M+ A+      +     PD+VTY  ++   CK G+ 
Sbjct: 371 PKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A+++ + +   G  P  +  +T+ D
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVID 457



 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 114/201 (56%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+   L   G  PD+ITYN +I GYC    ++ A+ + ++++   + P+ +T+  ++ 
Sbjct: 156 AAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C  G++  A  +  +ML++    +V+TY+ LI+   +   +  A  + +EM +   +P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTP 272

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y++L++G+CK G ++EA+   +    +   P+V+T+ I++R  C  GR  +A +L 
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             MLR G  P  +  + L ++
Sbjct: 333 ADMLRKGFSPSVVTFNILINF 353



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM + G + N ++Y+ L+ G+ K + M  A +  E M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ ++  LCK G +E+A+   +        P ++TY  +I G  KAG+ 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L D M    + PD +  S+L
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSL 490



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+   K    +   G  PDII   T+I G+C + +  +A ++ E L      P+
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ ++I  +CK G +++A  +  +M       +VVTY+ ++     S  +K A +V +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + +  P++++Y+ILI+  C+   + +A+       D    PDVVTY +L+ G CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++  + M  +G  P+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPN 308



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL   +  +G  P ++T+N +I   C    L  A+ + EK+     +PNS+++  L+ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCKE +MD A     +M+ +G   ++VTY+ ++    K   ++ A ++  ++     SP
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G   +A+          L PD +TY+ L+ G  + G+  EA++ +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 191 DSMLRNGIMPDGLLLSTL 208
               R G+ P+ +  +++
Sbjct: 508 HEFERMGVRPNAVTFNSI 525



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 109/199 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+ +  ++   G +P+ ++YN ++ G+C   ++D A++  E++      P+
Sbjct: 354 LCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  ++ A CK+G+++DA  + +++  KG    ++TY+ +IDG  K+     A  + +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++ P+ ++YS L+ GL + G ++EA+  FH      + P+ VT+  ++ G CK  
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A+     M+  G  P
Sbjct: 534 QTDRAIDFLVYMINRGCKP 552



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ AL +  +++   + PD++TYNTI+   C   +L +A+++ +++      P+ I
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+A C++  +  A  +  +M ++G   +VVTY+ L++G  K   +  A     +M
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+ G  
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ + + M ++G  P+ L
Sbjct: 361 GRAIDILEKMPKHGCQPNSL 380



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 98/196 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A++   ++  RG  PDI+TYNT++   C   ++++AV++  +L+     P  I
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+   A  +  +M  K  K + +TYS L+ G  +   +  A   + E 
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN V+++ ++ GLCK    + A+      ++    P   +Y ILI G    G  
Sbjct: 511 ERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMA 570

Query: 184 TEAMQLYDSMLRNGIM 199
            EA++L + +   G+M
Sbjct: 571 KEALELLNELCNKGLM 586



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 109/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+++  ++  R   PD+ITY  +I   C  + + +A++L +++      P+ +T+ +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  CKEGR+D+A    + M   G + NV+T++ ++     +     A  +  +M    
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++V+++ILI+ LC++GL+  A+        +   P+ ++Y  L+ G+CK  +   A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +  + M+  G  PD +  +T+
Sbjct: 400 EYLERMVSRGCYPDIVTYNTM 420



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 86/151 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A+++  QL+ +G  P +ITYNT+I G     +  +A++L +++    LKP+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +IT++ L+    +EG++D+A   F +    G + N VT++ ++ G  K++    A D   
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLV 543

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M      P   SY+ILI+GL   G+ +EAL
Sbjct: 544 YMINRGCKPTETSYTILIEGLAYEGMAKEAL 574



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + G +++       M+  G   +++  + LI G+ +    + A  + E +  +   P+++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           +Y+++I G CK G +  AL      LD   + PDVVTY  ++R  C +G+  +AM++ D 
Sbjct: 174 TYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSG 217
           ML+    PD +  + L +   + SG
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSG 254



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 47/91 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +D A+K F +    G+ P+ +T+N+I+ G C   + D A+     +     KP 
Sbjct: 494 LSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPT 553

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             ++TILI+    EG   +A  + +++  KG
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKG 584


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 119/209 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L KE   + A ++   +    + P  I YNT+I GY   +   +A+ L+ K+  V + P
Sbjct: 542 WLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPP 601

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + +T+T+LI+ F    +M +A  +F +M++KG   + + ++C+I G+ K  +MKSA+ +Y
Sbjct: 602 SIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALY 661

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM +   SPN+V+Y+ LIDG  K   M++A + F+    +++ PD +TY  LI GY   
Sbjct: 662 EEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSL 721

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           G      ++++ M  NG+ P+    +TL 
Sbjct: 722 GYSDRVREMFNEMKENGVFPNYTAYATLG 750



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 108/212 (50%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + +L +F  L   G + D+I+YNT+I G+     +  A +L  ++      PNS TF  L
Sbjct: 410 EISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRL 469

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I  FCK  R+D A  +F+ ML+ G + N+ T + + D + +  +   A  +  E+ +  I
Sbjct: 470 IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGI 529

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN  +Y+I+I  LCK    E+A       L N++ P  + Y  LI GY K   PT+A+ 
Sbjct: 530 VPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALL 589

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           LY  ML+ GI P  +  + L +     S  QE
Sbjct: 590 LYAKMLKVGIPPSIVTYTMLINMFSNRSKMQE 621



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 107/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD AL++F  +   G++ +I T N +   +       EA++L  ++  + + PNS 
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I+I   CKE + + A  +   ML+       + Y+ LIDGY K  N   A  +Y +M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  I P+IV+Y++LI+    R  M+EA Y F   +   L+PD + +  +I G+CK G  
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A  LY+ M + G  P+ +  + L D
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCLID 681



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 98/205 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A ++  ++   G  P ++TY   I G C    ++ A++L   L       NS 
Sbjct: 265 KNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSY 324

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I  FC+ G + +A  +   M   G      +YS LIDG  K   ++ A D+ EEM
Sbjct: 325 CYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEM 384

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++N+ P++V+YS L DGLCK GL E +L  FH         DV++Y  LI G+      
Sbjct: 385 VQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDM 444

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L   M  NG +P+    + L
Sbjct: 445 GSACKLVHEMRMNGSVPNSFTFNRL 469



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 36/252 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   L  A +L   +   G+ P   +Y+ +I G C   ++++A+ L E++    +KP+ +
Sbjct: 335 RNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLV 394

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ L D  CK G  + +  MF  +  +G K +V++Y+ LI+G+   ++M SA  +  EM
Sbjct: 395 TYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEM 454

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL------------------------ 159
             N   PN  +++ LI G CKR  +++AL  F   L                        
Sbjct: 455 RMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHF 514

Query: 160 -----------DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                      D  ++P+  TY I+I+  CK  +  +A ++   ML+N + P  +  +TL
Sbjct: 515 WEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTL 574

Query: 209 AD-YNLQSSGSQ 219
            D Y  QS+ ++
Sbjct: 575 IDGYAKQSNPTK 586



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL+L   L  R    +   YN +I  +C    L EA +L E +    + P + +++I
Sbjct: 304 VEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSI 363

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK+G+++ A  +  +M++   K ++VTYS L DG  KS   + +  ++  +    
Sbjct: 364 LIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEG 423

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              +++SY+ LI+G   +  M  A    H    N  +P+  T+  LI G+CK  R  +A+
Sbjct: 424 YKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKAL 483

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +++  ML+ G+  +    + +AD
Sbjct: 484 EVFTIMLKVGVQLNIFTCNIMAD 506



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +DAA  +F Q    GLE +I++ N ++  +   N+ +    LFE+L      PN  T+TI
Sbjct: 195 VDAA-DVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTI 253

Query: 68  LIDAFCKE--GRMDD---ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++ +CK   G+  D   AT +  +M   G    VVTY   I G  ++  ++ A  +  +
Sbjct: 254 MMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRD 313

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +   N   N   Y+ +I   C+ G + EA         + + P   +Y+ILI G CK G+
Sbjct: 314 LRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQ 373

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             +A+ L + M+++ + P  +  S+L D
Sbjct: 374 VEKALDLIEEMVQSNVKPSLVTYSSLFD 401



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           I   +LI  F +   + DA  +F +    G + N+++ + L++ + ++   +    ++EE
Sbjct: 179 IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEE 238

Query: 123 MCENNISPNIVSYSILIDGLCKRGL-----MEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           + ++  SPN+ +Y+I+++  CK        + +A         N   P VVTY   I G 
Sbjct: 239 LKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGL 298

Query: 178 CKAGRPTEAMQL-YDSMLRN 196
           C+AG    A++L  D  +RN
Sbjct: 299 CRAGCVEFALRLIRDLRIRN 318


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 122/207 (58%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IKE ++D+AL ++ ++ + G+ P+++TY ++I G+C  NR+D A++  +++    L+ +
Sbjct: 619 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 678

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++ LID FCK   M+ A  +F ++LE G   N + Y+ +I G+    NM++A   Y+
Sbjct: 679 VTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYK 738

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  + I  ++ +Y+ LIDGL K G +  A   +   L   ++PD++T+ +L+ G C  G
Sbjct: 739 KMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 798

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A ++ + M R  + P  L+ +TL
Sbjct: 799 QLENARKILEEMDRKNMTPSVLIYNTL 825



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 1/206 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K    + A KLF +  D G+  +I TYN ++   C   ++DEA  L + +    + PN 
Sbjct: 446 LKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNV 504

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++  +I   C++G MD A+ +FS ML +  K NVVTYS LIDG FK  + + A D++++
Sbjct: 505 VSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQ 564

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M   NI+P   +++ +I+GLCK G M EA       L+   +P  +TY  ++ G+ K G 
Sbjct: 565 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 624

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
              A+ +Y  M   G+ P+ +  ++L
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSL 650



 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 111/215 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D ALK   ++ ++GLE D+  Y+ +I G+C    ++ A  LF +L  V L PN I
Sbjct: 656 KSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI 715

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +  +I  F     M+ A + + KM+      ++ TY+ LIDG  K   +  A D+Y EM
Sbjct: 716 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 775

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P+I+++ +L++GLC +G +E A          ++ P V+ Y  LI GY + G  
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            EA  L+D ML  G++PD +    L +   +   S
Sbjct: 836 KEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 35/243 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L K   +D A  L   + ++G+ P++++YN +I G+C    +D A  +F  +    LKP
Sbjct: 478 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 537

Query: 61  NSITFTILID-----------------------------------AFCKEGRMDDATMMF 85
           N +T++ILID                                     CK G+M +A    
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
              LE+G   + +TY+ ++DG+ K  N+ SA  VY EMCE  +SPN+V+Y+ LI+G CK 
Sbjct: 598 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 657

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
             ++ AL       +  L  DV  Y+ LI G+CK      A  L+  +L  G+ P+ ++ 
Sbjct: 658 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVY 717

Query: 206 STL 208
           +++
Sbjct: 718 NSM 720



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 111/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A        + G  P  +TYN+I+ G+     +D A+ ++ ++    + PN
Sbjct: 584 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 643

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LI+ FCK  R+D A     +M EKG + +V  YS LIDG+ K ++M+SA D++ 
Sbjct: 644 VVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF 703

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E  +SPN + Y+ +I G      ME AL  +   +++ +  D+ TY  LI G  K G
Sbjct: 704 ELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEG 763

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           R   A  LY  ML  GI+PD +    L +
Sbjct: 764 RLVFASDLYMEMLSKGIVPDIITFHVLVN 792



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 34/240 (14%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP---- 60
           + +LD+AL LF ++T+ GL P+ +TY+ +I G C+   +++A +L+ ++    + P    
Sbjct: 378 QGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 437

Query: 61  ------------------------------NSITFTILIDAFCKEGRMDDATMMFSKMLE 90
                                         N  T+ I++   CK G+MD+A  +   M+ 
Sbjct: 438 VNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVN 497

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           +G   NVV+Y+ +I G+ +  NM  A  V+ +M   ++ PN+V+YSILIDG  K+G  E+
Sbjct: 498 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AL  F   L  ++ P   T+  +I G CK G+ +EA     + L  G +P  +  +++ D
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 617



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 122/218 (55%), Gaps = 1/218 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + + ++  AL+L  ++ + G   +++   +++ GYC+   LD A+ LF K+T   L PN 
Sbjct: 341 VAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNK 400

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+++LI+  C  G ++ A+ ++++M   G   +V   + L+ GY K+   + A  +++E
Sbjct: 401 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 460

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             +  ++ NI +Y+I++  LCK G M+EA       ++  ++P+VV+Y  +I G+C+ G 
Sbjct: 461 AVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 519

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A  ++  ML   + P+ +  S L D N +   S++
Sbjct: 520 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 103/196 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE  ++ A + F +  +RG++ D   Y+ II   C     +  ++L E++      P+ 
Sbjct: 271 LKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSE 330

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TFT +I A   +G M +A  +  +M+  G   N+V  + L+ GY    N+ SA +++ +
Sbjct: 331 ATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK 390

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + E+ + PN V+YS+LI+G C  G +E+A   +     N + P V     L+RGY KA  
Sbjct: 391 ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 450

Query: 183 PTEAMQLYDSMLRNGI 198
             EA +L+D  +  G+
Sbjct: 451 WEEASKLFDEAVDCGV 466



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +     L+ ++  RG+  D  T + ++       R++EA + F +     +K +
Sbjct: 235 LVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD 294

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  ++I+I A CK+   +    +  +M E+G   +  T++ +I       NM  A  + E
Sbjct: 295 AGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKE 354

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM       N+V  + L+ G C +G ++ AL  F+   ++ L P+ VTY++LI G C +G
Sbjct: 355 EMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSG 414

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A +LY  M  NGI P    +++L
Sbjct: 415 NIEKASELYTQMKLNGIPPSVFNVNSL 441



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 65/108 (60%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+KE  L  A  L+ ++  +G+ PDIIT++ ++ G C+  +L+ A ++ E++    + P+
Sbjct: 759 LLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPS 818

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
            + +  LI  + +EG + +A  +  +ML++G   + VTY  LI+G FK
Sbjct: 819 VLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 1/185 (0%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
            E D   +N ++  Y   NR++ A+  F  + C  + P      IL+ A  +   + +  
Sbjct: 186 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 245

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +++KM+ +G   +  T   ++    K   ++ A + + E  E  +  +  +YSI+I  +
Sbjct: 246 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 305

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK+      L       +   +P   T+  +I      G   EA++L + M+  G  P  
Sbjct: 306 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG-KPMN 364

Query: 203 LLLST 207
           L+++T
Sbjct: 365 LVVAT 369


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 120/214 (56%), Gaps = 1/214 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L A  + +  +   G +PD++T+++II   C   ++ E   L  ++  + + PN +T+T
Sbjct: 239 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYT 298

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D+  K      A  ++S+M+ +G   ++V Y+ L+ G FK+ +++ A   ++ + E+
Sbjct: 299 TLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLED 358

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N  PN+V+Y+ L+DGLCK G +  A +     L+  + P+VVTY+ +I GY K G   EA
Sbjct: 359 NEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEA 418

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           + L   M    ++P+G    T+ D  L  +G QE
Sbjct: 419 VSLMRKMEDQNVVPNGFTYGTVID-GLFKAGKQE 451



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 106/198 (53%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ + G+ P+ +TY T++           A+ L+ ++    +  + + +T+L+    
Sbjct: 281 LLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLF 340

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G + +A   F  +LE     NVVTY+ L+DG  K+ ++ SA  +  +M E ++ PN+V
Sbjct: 341 KAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVV 400

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +YS +I+G  K+G++EEA+       D +++P+  TY  +I G  KAG+   A ++   M
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEM 460

Query: 194 LRNGIMPDGLLLSTLADY 211
              G+  +  +L  L ++
Sbjct: 461 RLIGVEENNYILDALVNH 478



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      AL L+ Q+  RG+  D++ Y  ++ G      L EA + F+ L      PN
Sbjct: 304 LFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPN 363

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T L+D  CK G +  A  + ++MLEK    NVVTYS +I+GY K   ++ A  +  
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMR 423

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILIR 175
           +M + N+ PN  +Y  +IDGL K G  E A      +       +N++L  +V +   I 
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRI- 482

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                GR  E   L   M+  G+  D +  ++L D
Sbjct: 483 -----GRIKEVKGLVKDMVSKGVTLDHINYTSLID 512



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 35/232 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +  LKL+ ++   G++P ++  N ++   C   ++ EA+ + +++  +++ PN  
Sbjct: 585 KQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLT 644

Query: 64  TFTILID-----------------------------------AFCKEGRMDDATMMFSKM 88
           T+ I +D                                     CK G    A M+   M
Sbjct: 645 TYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDM 704

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             +G   + VT++ L+ GYF   ++  A   Y  M E  ISPN+ +Y+ +I GL   GL+
Sbjct: 705 EARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLI 764

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           +E            + PD  TY  LI G  K G   E+M +Y  M+ +G++P
Sbjct: 765 KEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVP 816



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 7/191 (3%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L +R +  D +TYNT+I G C     DEA Q   ++  + + P++++F  LID FCK G 
Sbjct: 152 LRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGN 211

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              A  +  ++ E     N++T++ LI  Y+   N+ +  + Y +M  +   P++V++S 
Sbjct: 212 FARAKALVDEISE----LNLITHTILISSYY---NLHAIEEAYRDMVMSGFDPDVVTFSS 264

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +I+ LCK G + E         +  + P+ VTY  L+    KA     A+ LY  M+  G
Sbjct: 265 IINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRG 324

Query: 198 IMPDGLLLSTL 208
           I  D ++ + L
Sbjct: 325 IPVDLVVYTVL 335



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 36/234 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L +A  +  Q+ ++ + P+++TY+++I GY     L+EAV L  K+    + PN
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPN 433

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKM--------------------------------- 88
             T+  +ID   K G+ + A+ M  +M                                 
Sbjct: 434 GFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493

Query: 89  --LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
             + KG   + + Y+ LID +FK  + ++A    EEM E  +  ++VSY++LI GL K G
Sbjct: 494 DMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFG 553

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            +  A +A+    +  + PD+ T+ I++    K G     ++L+D M   GI P
Sbjct: 554 KV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKP 606



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 89/198 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    DA  K    L   G++     YNT+I   C L    +A  + E +      P+++
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTV 714

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+  +     +  A   +S M+E G   NV TY+ +I G   +  +K       EM
Sbjct: 715 TFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEM 774

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+  +Y+ LI G  K G  +E++  +   + + L+P   TY +LI  + K G+ 
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKM 834

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A +L   M +  + P+
Sbjct: 835 LQATELMKEMGKRRVSPN 852



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 74/159 (46%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           RG  PD +T+N ++ GY   + + +A+  +  +    + PN  T+  +I      G + +
Sbjct: 707 RGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKE 766

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
                S+M  +G + +  TY+ LI G  K  N K +  +Y EM  + + P   +Y++LI 
Sbjct: 767 VEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLIS 826

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              K G M +A           + P+  TY  +I G CK
Sbjct: 827 EFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 69/138 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  AL  +  + + G+ P++ TYNTII G      + E  +   ++    ++P+  T+ 
Sbjct: 728 HVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYN 787

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI    K G   ++  ++ +M+  G      TY+ LI  + K   M  A ++ +EM + 
Sbjct: 788 ALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKR 847

Query: 127 NISPNIVSYSILIDGLCK 144
            +SPN  +Y  +I GLCK
Sbjct: 848 RVSPNTSTYCTMISGLCK 865



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 34/234 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL--DEAVQLFEKLTCVQLKPNSIT 64
            L  A +    +   G+ PD+  +N++I  + ++N L  D+   ++ K+    + P+   
Sbjct: 73  RLYGAARTLSAMCTFGVVPDLCLWNSLIHQF-NVNGLVHDQVSLVYSKMIACGVSPDVFA 131

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
             +LI + CK G++  A    S +  +    + VTY+ +I G  +      A+    EM 
Sbjct: 132 LNVLIHSLCKVGQLSFA---ISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEA------------------------LYAFHCALD 160
           +  I P+ VS++ LIDG CK G    A                        L+A   A  
Sbjct: 189 KIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYR 248

Query: 161 NHLL----PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           + ++    PDVVT++ +I   CK G+  E   L   M   G+ P+ +  +TL D
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVD 302



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 36/234 (15%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  L+ A+ L  ++ D+ + P+  TY T+I G     + + A ++ +++  + ++ N+
Sbjct: 410 VKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENN 469

Query: 63  -----------------------------------ITFTILIDAFCKEGRMDDATMMFSK 87
                                              I +T LID F K G  + A     +
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEE 529

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M EK    +VV+Y+ LI G  K   + + +  Y+ M E  I P+I +++I+++   K+G 
Sbjct: 530 MQEKEMPWDVVSYNVLISGLLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGD 588

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            E  L  +       + P ++   I++   C+ G+  EA+ + D M+   I P+
Sbjct: 589 FEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPN 642



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 92/185 (49%), Gaps = 1/185 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +  +G+  D I Y ++I  +      + A+   E++   ++  + +++ +LI    
Sbjct: 491 LVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLL 550

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G++  A   +  M EKG + ++ T++ +++   K  + +    ++++M    I P+++
Sbjct: 551 KFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLM 609

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
             +I++  LC++G M+EA+      +   + P++ TY I +    K  R     + ++++
Sbjct: 610 ICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETL 669

Query: 194 LRNGI 198
           L  GI
Sbjct: 670 LSYGI 674


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ AL+LF +   +G++PDI+ YN+++ G C    +  A+Q+  ++      P+
Sbjct: 338 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 397

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I+  CK G + DAT++ +  + KG   +V T++ LIDGY K   + SA  + E
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 457

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  I+P+ ++Y+ +++GLCK G + E    F   +     P+ +TY ILI  +C++ 
Sbjct: 458 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 517

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA ++   M + G+ PD +  +TL
Sbjct: 518 KMEEASKVIVKMSQEGLHPDAVSFNTL 544



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+     A+    ++ ++G  PD  TYNTII GYC ++ + EA +L +        P+
Sbjct: 268 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 327

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C EG ++ A  +F++   KG K ++V Y+ L+ G      +  A  V  
Sbjct: 328 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 387

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P+I +Y+I+I+GLCK G + +A    + A+    LPDV T+  LI GYCK  
Sbjct: 388 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 447

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +   A+QL + M   GI PD +  +++
Sbjct: 448 KLDSALQLVERMWEYGIAPDTITYNSV 474



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 98/186 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TYNT+I G C  +   EA+    ++      P+  T+  +ID +CK   + +AT +
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
               + KG   + VTY  LI+G     +++ A +++ E     I P+IV Y+ L+ GLC 
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           +GL+  AL   +   +    PD+ TY I+I G CK G  ++A  + +  +  G +PD   
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435

Query: 205 LSTLAD 210
            +TL D
Sbjct: 436 FNTLID 441



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 99/190 (52%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PD+ T+NT+I GYC   +LD A+QL E++    + P++IT+  +++  CK G++++
Sbjct: 427 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 486

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
               F +M+ KG   N +TY+ LI+ + +S  M+ A  V  +M +  + P+ VS++ LI 
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G +E A   F    +        T+  LI  +        A +++D ML  G   
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606

Query: 201 DGLLLSTLAD 210
           D      L D
Sbjct: 607 DSYTYRVLID 616



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 106/197 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD+AL+L  ++ + G+ PD ITYN+++ G C   +++E  + F+++      PN I
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 504

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ ILI+ FC+  +M++A+ +  KM ++G   + V+++ LI G+ ++ +++ A+ +++++
Sbjct: 505 TYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 564

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E   S    +++ LI     +  M  A   F   L      D  TY +LI G CK    
Sbjct: 565 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 624

Query: 184 TEAMQLYDSMLRNGIMP 200
             A      M++ G +P
Sbjct: 625 DRAYMHLVEMIKKGFIP 641



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 99/187 (52%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F ++  +G  P+ ITYN +I  +C  N+++EA ++  K++   L P++++F  LI  FC+
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G ++ A ++F K+ EKG  A   T++ LI  +    NM  A  +++EM       +  +
Sbjct: 551 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 610

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y +LIDG CK   ++ A       +    +P + T+  +I       R  +A+ +   M+
Sbjct: 611 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670

Query: 195 RNGIMPD 201
           + G++P+
Sbjct: 671 KIGVVPE 677



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 40/210 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   L  RG     + Y T++CG  +     +A QLF+++    + PN   F  ++ 
Sbjct: 142 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 197

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A CK G + +A ++  K++++G                                   +S 
Sbjct: 198 ALCKRGDVLEAGLLLGKVIQRG-----------------------------------MSI 222

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+I I GLC+ G + EA+      +  + +PDVVTY  LIRG CK   P EAM   
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVD-GMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 281

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M+  G +PD    +T+ D   + S  QE
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQE 311



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 86/161 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A K+  +++  GL PD +++NT+I G+C    L+ A  LF+KL        + TF  
Sbjct: 519 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 578

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI AF  +  M  A  +F +ML KG +A+  TY  LIDG  K+ N+  A+    EM +  
Sbjct: 579 LIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 638

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
             P++ ++  +I+ L     + +A+   H  +   ++P+VV
Sbjct: 639 FIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 5/196 (2%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P    YN I+         D+A +++ ++    + P+  T TI + +FC   R   A   
Sbjct: 86  PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIAL-- 143

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             ++L   P    V Y  ++ G +   +   A  ++++M   ++ PN+ +++ ++  LCK
Sbjct: 144 --RLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK 201

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
           RG + EA       +   +  ++ TY I IRG C+AGR  EA++L D M R   +PD + 
Sbjct: 202 RGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVT 260

Query: 205 LSTLADYNLQSSGSQE 220
            +TL     + S  QE
Sbjct: 261 YNTLIRGLCKKSMPQE 276



 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 45/98 (45%)

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           Y   I  Y ++  ++ A D +E M      P   +Y+ ++D L      ++A   +   L
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
              + PD+ T+ I +R +C   RP  A++L  ++   G
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 153


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 118/207 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE H++AA +L   LT +G+ PD+ T+N++I G C  +  + A++LFE++      P+
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ILI++ C E R+ +A M+  +M   G   NVV Y+ LIDG  K+  +  A D+++
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    +S + V+Y+ LI+GLCK   +EEA       +   L PD  TY  +++ +C+ G
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A  +  +M  NG  PD +   TL
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTL 588



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 35/245 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +  H+   L++   + ++G E D+ TYN++I G C L  +DEAV++   +     +PN
Sbjct: 312 LCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN 371

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  LI   CKE  ++ AT +   +  KG   +V T++ LI G   + N + A +++E
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH------CALD-------------NH 162
           EM E    P+  +YSILI+ LC    ++EAL          CA +             N+
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491

Query: 163 LLPDV----------------VTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            + D                 VTY  LI G CK+ R  EA QL D M+  G+ PD    +
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYT 551

Query: 207 TLADY 211
           T+  Y
Sbjct: 552 TMLKY 556



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 36/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L  AL L  ++   G   +++ YNT+I G C  NR+ +A  +F+++  + +  +
Sbjct: 452 LCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRS 511

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+  LI+  CK  R+++A  +  +M+ +G K +  TY+ ++  + +  ++K A D+ +
Sbjct: 512 SVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQ 571

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLME-------------------------------- 149
            M  N   P+IV+Y  LI GLCK G ++                                
Sbjct: 572 NMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRK 631

Query: 150 ---EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
              EA+  F   ++    PDV+TY I+ RG C  G P  EA+     ML  GI+P+
Sbjct: 632 RTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPE 687



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 6/211 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF--EKLTCVQLK 59
            I+E  ++ AL++   + + G E   ++ N ++ G C   R++EA++    E+  C    
Sbjct: 244 FIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFC---- 299

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ +TF  L++  C+ G +     M   MLEKG + +V TY+ LI G  K   +  A ++
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              M   +  PN V+Y+ LI  LCK   +E A           +LPDV T+  LI+G C 
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 AM+L++ M   G  PD    S L +
Sbjct: 420 TSNREIAMELFEEMKEKGCDPDEFTYSILIE 450



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 4/193 (2%)

Query: 7   HLDAALKLFGQLTDR--GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           HL A +     L +R   ++PD   YN  +      N+L     L  K+    + P+  T
Sbjct: 142 HLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVST 201

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F ILI A CK  ++  A +M   M   G + +  T++ L+ G+ +  +++ A  + E M 
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV 261

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+      VS ++L++GLCK G +EEAL   +   +    PD VT+  L+ G C+ G   
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALRFIY--EEEGFCPDQVTFNALVNGLCRTGHIK 319

Query: 185 EAMQLYDSMLRNG 197
           + +++ D ML  G
Sbjct: 320 QGLEMMDFMLEKG 332



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 4/209 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+K   L     L  ++    + PD+ T+N +I   C  ++L  A+ + E +    L+P
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRP 232

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-V 119
           +  TFT L+  F +E  ++ A  +   M+E G +   V+ + L++G  K   ++ A   +
Sbjct: 233 DEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI 292

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           YE   E    P+ V+++ L++GLC+ G +++ L      L+     DV TY  LI G CK
Sbjct: 293 YE---EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCK 349

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   EA+++   M+     P+ +  +TL
Sbjct: 350 LGEIDEAVEILHHMVSRDCEPNTVTYNTL 378



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 1/197 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +L  Q+   GL+PD  TY T++  +C    +  A  + + +T    +P+
Sbjct: 522 LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPD 581

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK GR+D A+ +   +  KG       Y+ +I    K +  K A  ++ 
Sbjct: 582 IVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFR 641

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E    P++++Y I+  GLC   G ++EA+      L+  +LP+  ++  L  G C  
Sbjct: 642 EMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSL 701

Query: 181 GRPTEAMQLYDSMLRNG 197
                 +QL + ++  G
Sbjct: 702 SMEDTLIQLINMVMEKG 718


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++P ++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G + ++V +  +I+   K   +  A ++++      
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y++L+DG C  G ME+AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  ML+ GI P  +L + + D
Sbjct: 592 SLFREMLQKGIKPSTILYNIIID 614



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 113/204 (55%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  D I  + ++ G+C   R DEA+ +      +L CV   P+  ++ 
Sbjct: 132 ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCV---PDVFSYN 188

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     +VV Y+ +IDG+FK  ++  A D+++EM 
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++V+YS ++  LCK   M++A       ++  +LPD  TY  LI GY   G+  
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R  I+PD + L+TL
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTL 332



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 112/199 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I + I
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A + F +M E G   N  TYS ++ G FK++    A  +++E+   N
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 671

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I++ + +I G+ +   +EEA   F     + L+P  VTY+I+I    K G   EA 
Sbjct: 672 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAE 731

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  PD  LL+
Sbjct: 732 DMFSSMQNAGCEPDSRLLN 750



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 112/190 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F    + GL PD + YN ++ GYC + ++++A+++F+ +    ++PN + +  L++
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK GR+D+   +F +ML+KG K + + Y+ +IDG F++     A   + EM E+ I+ 
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +YSI++ GL K    +EA++ F      ++  D++T   +I G  +  R  EA  L+
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 191 DSMLRNGIMP 200
            S+ R+G++P
Sbjct: 700 ASISRSGLVP 709



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++G+ PD  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    L+ + CK G++ +A  +F  M  KG   +V +Y+ +++GY     +    D+++
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P I ++++LI      G++++A+  F+   D+ + P VVTY  +I   C+ G
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G++PD
Sbjct: 446 KMDDAMEKFNQMIDQGVVPD 465



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ P I T+N +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 374 KGCLVDMT-DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVV 432

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I A C+ G+MDDA   F++M+++G   +   Y CLI G+    ++  A ++  E+
Sbjct: 433 TYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI 492

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +  +I+ LCK G + +A   F   ++  L PD V Y +L+ GYC  G+ 
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ +   TL +
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVN 579



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 101/191 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ PD   Y+ +I G+C+   L +A +L  ++    ++ + + F  
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G   + V Y+ L+DGY     M+ A  V++ M    
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+V Y  L++G CK G ++E L  F   L   + P  + Y I+I G  +AGR   A 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 188 QLYDSMLRNGI 198
             +  M  +GI
Sbjct: 627 VKFHEMTESGI 637



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 96/176 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++ YNT+I G+     +++A  LF+++    + P+ +T++ ++ A CK   MD A   
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ KG   +  TY+ LI GY  +   K A  V++EM   +I P++V+ + L+  LCK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI P
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 111/210 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ + +II   C L R+ +A  +F+    V L P+++ + +L+D
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + NVV Y  L++GY K   +     ++ EM +  I P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+I+IDGL + G    A   FH   ++ +  +  TY+I++RG  K     EA+ L+
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  D + L+T+     Q+   +E
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEE 694



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 3/154 (1%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + + +  S L+ G+ +++    A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SY+IL+  LC +G   +A        +   +  PDVV Y  +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+ K G   +A  L+  M++ GI PD +  S++
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ DIIT NT+I G     R++EA  LF  ++   L P 
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T++I+I    KEG +++A  MFS M   G + +    + ++    K   +  A     
Sbjct: 711 AVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 770

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           ++ E N S   ++  +L+D    +G   E +
Sbjct: 771 KIDERNFSLEHLTAMLLVDLFSSKGTCREQI 801


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ AL L  ++ D G+ P++  YN +I   C   +  EA  LF+++  + L+PN
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ILID FC+ G++D A     +M++ G K +V  Y+ LI+G+ K  ++ +A     
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P +V+Y+ L+ G C +G + +AL  +H      + P + T+  L+ G  +AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              +A++L++ M    + P+
Sbjct: 522 LIRDAVKLFNEMAEWNVKPN 541



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 106/193 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  +   LD AL   G++ D GL+  +  YN++I G+C    +  A     ++   +L+P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +T+T L+  +C +G+++ A  ++ +M  KG   ++ T++ L+ G F++  ++ A  ++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM E N+ PN V+Y+++I+G C+ G M +A        +  ++PD  +Y  LI G C  
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590

Query: 181 GRPTEAMQLYDSM 193
           G+ +EA    D +
Sbjct: 591 GQASEAKVFVDGL 603



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 35/242 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+ +   L  + L+PD++TY T++ G C +   +  +++ +++ C++  P+
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
               + L++   K G++++A  +  ++++ G   N+  Y+ LID   K +    A  +++
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------YAFHCALDNH---- 162
            M +  + PN V+YSILID  C+RG ++ AL               Y ++  ++ H    
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451

Query: 163 ----------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
                           L P VVTY  L+ GYC  G+  +A++LY  M   GI P     +
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511

Query: 207 TL 208
           TL
Sbjct: 512 TL 513



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 104/209 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H   A++LF  +   G+ PD+  Y  +I   C L  L  A ++   +       N
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + +LID  CK+ ++ +A  +   +  K  K +VVTY  L+ G  K Q  +   ++ +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     SP+  + S L++GL KRG +EEAL      +D  + P++  Y  LI   CK  
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA  L+D M + G+ P+ +  S L D
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILID 410



 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 4/205 (1%)

Query: 7   HLDAAL--KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           H D  L   L  ++ DRGL+PD + Y ++I          EA  +++ +      PN +T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEM 123
           +T +I+  CK G +++A ++ SKM       N VTY C +D   K + +M+ A +++  +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ++ N  +Y++LI G C++G +EEA       + + + PD +TY  +I   C+    
Sbjct: 780 LKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L++SM   GI PD +  +TL
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTL 863



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 104/198 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +  A +   ++T++G+ PD  +Y  +I G C   +  EA    + L     + N I
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T L+  FC+EG++++A  +  +M+++G   ++V Y  LIDG  K ++ K  F + +EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P+ V Y+ +ID   K G  +EA   +   ++   +P+ VTY  +I G CKAG  
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733

Query: 184 TEAMQLYDSMLRNGIMPD 201
            EA  L   M     +P+
Sbjct: 734 NEAEVLCSKMQPVSSVPN 751



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 104/192 (54%), Gaps = 2/192 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++  + + G  P+ +TY  +I G C    ++EA  L  K+  V   PN +T+   +D
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760

Query: 71  AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              K E  M  A  + + +L KG  AN  TY+ LI G+ +   ++ A ++   M  + +S
Sbjct: 761 ILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ ++Y+ +I+ LC+R  +++A+  ++   +  + PD V Y  LI G C AG   +A +L
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879

Query: 190 YDSMLRNGIMPD 201
            + MLR G++P+
Sbjct: 880 RNEMLRQGLIPN 891



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL+L+ ++T +G+ P I T+ T++ G      + +AV+LF ++    +KPN +T+ +
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+ +C+EG M  A     +M EKG   +  +Y  LI G   +     A    + + + N
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
              N + Y+ L+ G C+ G +EEAL      +   +  D+V Y +LI G  K        
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            L   M   G+ PD ++ +++ D   ++   +E
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 50/89 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  ++ A +L  ++   G+ PD ITY T+I   C  N + +A++L+  +T   ++P+ +
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            +  LI   C  G M  AT + ++ML +G
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQG 887



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 36/63 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A++L+  +T++G+ PD + YNT+I G C    + +A +L  ++    L PN
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891

Query: 62  SIT 64
           + T
Sbjct: 892 NKT 894


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 113/197 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+ + G  PD+ITY T+I G+C    +DEAV L + ++    KPN+I++TI
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C+  R  DA  + S M+++G   N VT++ LI+   K    + A ++ ++M  N 
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  EEAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 523

Query: 188 QLYDSMLRNGIMPDGLL 204
           Q++DS+    +  D  L
Sbjct: 524 QMFDSIQDATVRSDAAL 540



 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 125/241 (51%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA----------------- 46
           K+ H + A  +  ++   GL+P+++ YNT++ G CS  R +EA                 
Sbjct: 270 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 329

Query: 47  ------------------VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                             ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 330 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 389

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N ++Y+ ++ G  +++    A ++   M +    PN V+++ LI+ +CK+GL 
Sbjct: 390 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLA 449

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  GI P+ ++ S++
Sbjct: 450 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 509

Query: 209 A 209
           A
Sbjct: 510 A 510



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 10/204 (4%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---------- 57
           +D  ++L  +L   G EPDI++YN ++ G C   R D+  +L  ++  V           
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG 253

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             P+   +  +ID  CK+G  + A  + S+M   G K NVV Y+ ++ G   ++  + A 
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           D+  EM + +   + V+++IL+D  C+ GL++  +      L++  +PDV+TY  +I G+
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK G   EA+ L  +M   G  P+
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPN 397



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A++L  Q+   G  PD+I+Y+T+I G     + +EA++L   +    + PN+I ++ +
Sbjct: 450 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 509

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
             A  +EGR D    MF  + +   +++   Y+ +I    K      A D +  M  N  
Sbjct: 510 ASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGC 569

Query: 129 SPNIVSYSILIDGLCKRGLMEEA 151
            PN  +Y+ILI GL   GL+ EA
Sbjct: 570 MPNESTYTILIRGLASEGLVREA 592



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 22/215 (10%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A++    L  +G   D    N ++   C    +DE V+L  KL     +P+ +++  ++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 70  DAFCKEGRMDDATMM----------FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
              C   R DD   +           S+M E G   ++  Y+ +IDG  K  + + A D+
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAIL 173
              M    + PN+V Y+ ++ GLC     EEA      ++   C LD+      VT+ IL
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD------VTFNIL 334

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +C+ G     ++L + ML +G +PD +  +T+
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 369



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 10/215 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++  RG        + I+   C       AV+  + L       +S    +++ 
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN----------MKSAFDVY 120
           A C++G +D+   +  K+   G + ++V+Y+ ++ G   ++           M    +  
Sbjct: 187 AICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEAL 246

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M E+  +P++  Y+ +IDG+CK G  E A           L P+VV Y  +++G C A
Sbjct: 247 SQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSA 306

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            R  EA  L   M +     D +  + L D+  Q+
Sbjct: 307 ERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL+L   + ++G+ P+ I Y+++        R D+ +Q+F+ +    ++ +
Sbjct: 478 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 537

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  +I + CK    D A   F+ M+  G   N  TY+ LI G      ++ A D+  
Sbjct: 538 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 597

Query: 122 EMCENN 127
           E+C   
Sbjct: 598 ELCSRR 603



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 25/200 (12%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
           ++ YN +I GYC   R  +          V + PN+ T+  ++ + C  G + DA  +  
Sbjct: 76  VVAYNAMIAGYC---RAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLD 132

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M  +G  A       +++   +    +SA    + +     + +  + ++++  +C++G
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192

Query: 147 LMEEA------LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR----- 195
            ++E       L +F C       PD+V+Y  +++G C A R  +  +L   M+R     
Sbjct: 193 CVDEGVELLRKLPSFGCE------PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEAL 246

Query: 196 -----NGIMPDGLLLSTLAD 210
                +G  PD  + +T+ D
Sbjct: 247 SQMPEHGCTPDLRMYATIID 266



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            + LI + C  GR  DA          G  A VV Y+ +I GY ++  + +A  +   + 
Sbjct: 47  LSALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV- 102

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEAL 152
              + PN  +Y  ++  LC RGL+ +AL
Sbjct: 103 --PVPPNAYTYFPIVRSLCARGLIADAL 128


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 122/216 (56%), Gaps = 1/216 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+ + G  PD+ITY T+I G+C    +DEAV L + +T    KPN+I++TI
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C   R  DA  + S+M+++G   N +T++ LI+   K   ++ A ++ ++M  N 
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 539

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  +EAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 599

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           Q++D++    I  D +L + +   +L   G  E  I
Sbjct: 600 QMFDNIQDTTIRSDAVLYNAVIS-SLCKRGETERAI 634



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 35/242 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--------------------- 42
           KE HL+ A ++  ++   GL+P+++ YNT++ G CS  R                     
Sbjct: 346 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 405

Query: 43  --------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                         +D  ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N ++Y+ ++ G   ++    A D+  +M +     N ++++ LI+ LCK+GL+
Sbjct: 466 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 525

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  G+ P+ ++ S++
Sbjct: 526 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 585

Query: 209 AD 210
           A 
Sbjct: 586 AS 587



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 101/201 (50%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL L   L   G EPD+++YN ++ G C   R     +L E++  +   PN +TF  
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+ G  +    + ++M+E G   ++  Y+ +IDG  K  +++ A ++   M    
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V Y+ L+ GLC     EE         D     D VT+ IL+  +C+ G     +
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + ML +G MPD +  +T+
Sbjct: 425 ELLEQMLEHGCMPDVITYTTV 445



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 98/189 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  ++      P+I+T+NT+I   C     +   ++  ++      P+   +  +ID  
Sbjct: 285 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 344

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CKEG ++ A  + ++M   G K NVV Y+ L+ G   ++  +   ++  EM + +   + 
Sbjct: 345 CKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 404

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+++IL+D  C+ GL++  +      L++  +PDV+TY  +I G+CK G   EA+ L  S
Sbjct: 405 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464

Query: 193 MLRNGIMPD 201
           M   G  P+
Sbjct: 465 MTACGCKPN 473



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 95/206 (46%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A+++   L  RG   D+   N ++   C    +DEA+ L   L     +P+ +++  ++
Sbjct: 212 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 271

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C   R      +  +M+      N+VT++ LI    ++   +   +V  +M E+  +
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 331

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+I  Y+ +IDG+CK G +E A    +      L P+VV Y  L++G C A R  E  +L
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQS 215
              M       D +  + L D+  Q+
Sbjct: 392 LAEMFDKDCPLDDVTFNILVDFFCQN 417



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 94/198 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++  RG  P    Y+ I+   C       AV++ E L       +     ++++
Sbjct: 178 ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLN 237

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C +G +D+A  +   +   G + +VV+Y+ ++ G   ++      ++ EEM      P
Sbjct: 238 AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 297

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E         +++   PD+  YA +I G CK G    A ++ 
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +TL
Sbjct: 358 NRMPSYGLKPNVVCYNTL 375



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 79/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + DEA++L   +    + PN
Sbjct: 519 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 578

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K    + A +   
Sbjct: 579 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 638

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  +   PN  +Y+ILI GL   G ++EA
Sbjct: 639 YMVSSGCVPNESTYTILIRGLASEGFVKEA 668



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 3/182 (1%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YN ++ GYC   +L+ A +L      V + PN+ T+  ++ A C  GR+ DA  +  +M 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +G       Y  +++   +    +SA  V E++     + ++ + +++++ +C +G ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           EAL+           PDVV+Y  +++G C A R     +L + M+R    P+ +  +TL 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 210 DY 211
            Y
Sbjct: 307 SY 308



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 62/123 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL+L   + ++G+ P+ I Y++I        R+++ +Q+F+ +    ++ +
Sbjct: 554 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 613

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  +I + CK G  + A    + M+  G   N  TY+ LI G      +K A ++  
Sbjct: 614 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 673

Query: 122 EMC 124
           E+C
Sbjct: 674 ELC 676



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++  +++F  + D  +  D + YN +I   C     + A++    +      PN
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI     EG + +A  M +++  KG
Sbjct: 649 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            S+  + LI + C  GR  +A    S        A VV Y+ ++ GY ++  ++SA  + 
Sbjct: 94  GSVRLSSLIRSLCAAGRTAEAARALSAAGGG---AGVVAYNAMVAGYCRAGQLESARRLA 150

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             +    + PN  +Y  ++  LC RG + +AL            P    Y +++   C+ 
Sbjct: 151 AAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRG 207

Query: 181 GRPTEAMQLYDSMLRNG 197
           G    A+++ + +   G
Sbjct: 208 GGFRSAVRVLEDLHARG 224


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 116/221 (52%), Gaps = 3/221 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A +LF  +  RG +PD++TYNT+I G C   +LDEAV L E++    + P 
Sbjct: 124 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 183

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+T LID  CK  R+  A  +F KM E GP A     YS L +   ++  +  A  VY
Sbjct: 184 FVTYTTLIDHLCKFTRLQQAYEVFEKMAE-GPCACTEPAYSVLFNKLQRAGKLVEASRVY 242

Query: 121 EEMCENNISPNIVSYSILIDGLCKR-GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +MC  N+     +YS+++ GL K  G   EA       +   + PD   Y+ILI G CK
Sbjct: 243 SDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCK 302

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           A RP EA +++  M   GI P  +  +TL +  L ++  Q+
Sbjct: 303 ARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQD 343



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 94/169 (55%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P++++YN II GYC    +++A+    ++  +   P    ++ ++ +FCK G +  A  +
Sbjct: 42  PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 101

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F++M  KG + ++V ++ L+ G ++++ +  A +++  M      P++V+Y+ +I GLCK
Sbjct: 102 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 161

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
              ++EA++         + P  VTY  LI   CK  R  +A ++++ M
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 1/194 (0%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + GL P+ I YN +I   C    L EA    +++      PN +++ I+ID +CK   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 59

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           ++ A     +M E G       YS ++  + K+ N+  A DV+ EM      P+IV++++
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L+ GL +   + EA   F         PDVVTY  +I G CK  +  EA+ L + M +  
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 198 IMPDGLLLSTLADY 211
           + P  +  +TL D+
Sbjct: 180 VSPTFVTYTTLIDH 193



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 4/199 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ----LKPNSITFTILI 69
           LF  +   G+  +  TYN +I G+        A  LF+++   +      PN  T+ ILI
Sbjct: 382 LFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILI 441

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            + CK  ++++A  + S M +KG   ++  +  L+    ++  +  AF++Y+EM   N  
Sbjct: 442 SSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQ 501

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
             + S +IL+DG+ +RG ++EA        D  ++PD  TY  L+ G C  G+  +A +L
Sbjct: 502 QLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKL 561

Query: 190 YDSMLRNGIMPDGLLLSTL 208
            + ++R+G  P+   L  L
Sbjct: 562 VEELVRDGKRPENQGLRQL 580



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 98/195 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ AL    ++ + G  P    Y++I+  +C    + +A+ +F ++     +P+ +
Sbjct: 56  KARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIV 115

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F +L+    +  ++ +A  +F  M  +G K +VVTY+ +I G  K + +  A  + E M
Sbjct: 116 NFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM 175

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + ++SP  V+Y+ LID LCK   +++A   F    +         Y++L     +AG+ 
Sbjct: 176 KQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKL 235

Query: 184 TEAMQLYDSMLRNGI 198
            EA ++Y  M R  +
Sbjct: 236 VEASRVYSDMCRKNV 250



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 48/248 (19%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL  ++  + + PD   Y+ +I G C   R  EA ++F+++    + P  +T+  L++
Sbjct: 274 AAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 333

Query: 71  -----------------------------------AFCKEGRMDDATMMFSKMLEKGPKA 95
                                               FC  G  ++A  +F  M++ G   
Sbjct: 334 GLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVL 393

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN----ISPNIVSYSILIDGLCKRGLMEEA 151
           N  TY+ +I G+ K +   SA+ +++ M         +PN+ +Y ILI  LCK   +EEA
Sbjct: 394 NTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEA 453

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR---------NGIMPDG 202
                   D   +P +  + +L+    +AGR  +A +LY  M R         + I+ DG
Sbjct: 454 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDG 513

Query: 203 LLLSTLAD 210
           +L     D
Sbjct: 514 ILRRGSVD 521



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 7/169 (4%)

Query: 29  TYNTIICGYCSLNRLD----EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           TY+ ++ G   L+++D    EA +L  ++   ++ P+   ++ILI+  CK  R  +A  M
Sbjct: 256 TYSLVVLG---LSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEM 312

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F +M  +G    VVTY+ L++G   +  ++ A ++   M +    P+  SY+++I G C 
Sbjct: 313 FQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCA 372

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            G   EA   F   + + ++ +  TY  +I G+ K    + A  L+  M
Sbjct: 373 NGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRM 421



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 7/161 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFE---KLTCVQL 58
           L K   ++ A KL   + D+G  P +  +  ++       RLD+A +L++   ++ C QL
Sbjct: 444 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 503

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
             +S    IL+D   + G +D+A     +M + G   +  TY  L+ G         A  
Sbjct: 504 VGSS---NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARK 560

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           + EE+  +   P       L+  LC +G  + A Y F+C L
Sbjct: 561 LVEELVRDGKRPENQGLRQLLGALCAQGDFQGA-YEFYCWL 600



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 49/103 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++   +D A     Q+TD G+ PD  TY+ ++ G C   + D+A +L E+L     +P 
Sbjct: 514 ILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPE 573

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           +     L+ A C +G    A   +  +   G +  +  ++ L+
Sbjct: 574 NQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 122/208 (58%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +  A+++F ++  +G +PD+ T+N++I G C ++ +  A+ L   +    +  N++
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI+AF + G + +A  + ++M+ +G   + +TY+ LI G  ++  +  A  ++E+M
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + + P+ +S +ILI+GLC+ G++EEA+      +     PD+VT+  LI G C+AGR 
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            + + ++  +   GI PD +  +TL  +
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSW 672



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 5/203 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A K+  ++  RG  PD ITY  ++ G C + R+D A  LF ++     KP S+ F 
Sbjct: 296 RINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFN 351

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            LI  F   GR+DDA  + S M+   G   +V TY+ LI GY+K   +  A +V  +M  
Sbjct: 352 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRN 411

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
               PN+ SY+IL+DG CK G ++EA    +    + L P+ V +  LI  +CK  R  E
Sbjct: 412 KGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 471

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A++++  M R G  PD    ++L
Sbjct: 472 AVEIFREMPRKGCKPDVYTFNSL 494



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 108/200 (54%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           DA   L   +T  G+ PD+ TYN++I GY     +  A+++   +     KPN  ++TIL
Sbjct: 365 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTIL 424

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +D FCK G++D+A  + ++M   G K N V ++CLI  + K   +  A +++ EM     
Sbjct: 425 VDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 484

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ +++ LI GLC+   ++ AL+     +   ++ + VTY  LI  + + G   EA +
Sbjct: 485 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 544

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L + M+  G + D +  ++L
Sbjct: 545 LVNEMVFQGSLLDEITYNSL 564



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 35/235 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL++   + ++G +P++ +Y  ++ G+C L ++DEA  L  +++   LKPN++ F  LI 
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLIS 461

Query: 71  AFCKEGRMDDATMMFSKMLEKGPK-----------------------------------A 95
           AFCKE R+ +A  +F +M  KG K                                   A
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           N VTY+ LI+ + +   +K A  +  EM       + ++Y+ LI GLC+ G +++A   F
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              L + L+P  ++  ILI G C++G   EA++    M+  G  PD +  ++L +
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 636



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 98/174 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   +  A KL  ++  +G   D ITYN++I G C    +D+A  LFEK+    L P+
Sbjct: 533 FLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPS 592

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           SI+  ILI+  C+ G +++A     +M+ +G   ++VT++ LI+G  ++  ++    ++ 
Sbjct: 593 SISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 652

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           ++    I P+ V+Y+ L+  LCK G + +A       +++  +P+  T++IL++
Sbjct: 653 KLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQ 706



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 5/205 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+AL +   +T  G  P+ + Y T+I      NR++EA+QL E++  +   P++ TF 
Sbjct: 226 EVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 285

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I   CK  R+++A  M ++ML +G   + +TY  L++G  K   + +A D++  + + 
Sbjct: 286 DVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 344

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTE 185
              P  V ++ LI G    G +++A       + ++ ++PDV TY  LI GY K G    
Sbjct: 345 ---PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGL 401

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+++   M   G  P+    + L D
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVD 426



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 6/197 (3%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           CH  AA  +F  +  R + P + T+  ++   C++N +D A+ +   +T     PNS+ +
Sbjct: 191 CHKVAA-NVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIY 249

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             LI +  K  R+++A  +  +M   G   +  T++ +I G  K   +  A  +   M  
Sbjct: 250 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 309

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
              +P+ ++Y  L++GLCK G ++ A   F+        P  V +  LI G+   GR  +
Sbjct: 310 RGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDD 365

Query: 186 AMQLYDSMLRN-GIMPD 201
           A  +   M+ + GI+PD
Sbjct: 366 AKAVLSDMVTSYGIVPD 382



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 77/152 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D A  LF ++   GL P  I+ N +I G C    ++EAV+  +++      P+
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI+  C+ GR++D   MF K+  +G   + VTY+ L+    K   +  A  + +
Sbjct: 628 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLD 687

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
           E  E+   PN  ++SIL+  L  +  ++   +
Sbjct: 688 EGIEDGFVPNDRTWSILLQSLVPQETLDRRTF 719



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 4/185 (2%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EP   +YN ++    S N    A  +F  +   ++ P   TF +++ A C    +D A  
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +   M + G   N V Y  LI    K   +  A  + EEM      P+  +++ +I GLC
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K   + EA    +  L     PD +TY  L+ G CK GR   A  L+  + +    P  +
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSV 348

Query: 204 LLSTL 208
           + +TL
Sbjct: 349 IFNTL 353



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 13/115 (11%)

Query: 99  TYSCLIDGYFKSQNM-----------KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
            YSC  +  FKS N+           K A +V+ +M    I P + ++ +++  LC    
Sbjct: 169 VYSC--EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNE 226

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           ++ AL        +  +P+ V Y  LI    K  R  EA+QL + M   G +PD 
Sbjct: 227 VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 281


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ +F ++ D G++P ++TY T+I   C + ++D+A++ F ++    + P+   +  
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC  G +  A  + S+++  G + ++V +  +I+   K   +  A ++++      
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+ V Y++L+DG C  G ME+AL  F   +   + P+VV Y  L+ GYCK GR  E +
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L+  ML+ GI P  +L + + D
Sbjct: 592 SLFREMLQKGIKPSTILYNIIID 614



 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 113/204 (55%), Gaps = 9/204 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----EKLTCVQLKPNSITFT 66
           AL  FGQL   GL  D I  + ++ G+C   R DEA+ +      +L CV   P+  ++ 
Sbjct: 132 ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCV---PDVFSYN 188

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           IL+ + C +G+   A  +   M E G     +VV Y+ +IDG+FK  ++  A D+++EM 
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I P++V+YS ++  LCK   M++A       ++  +LPD  TY  LI GY   G+  
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA++++  M R  I+PD + L+TL
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTL 332



 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 112/199 (56%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL++F  +   G+EP+++ Y T++ GYC + R+DE + LF ++    +KP++I + I
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID   + GR   A + F +M E G   N  TYS ++ G FK++    A  +++E+   N
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 671

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  +I++ + +I G+ +   +EEA   F     + L+P  VTY+I+I    K G   EA 
Sbjct: 672 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAE 731

Query: 188 QLYDSMLRNGIMPDGLLLS 206
            ++ SM   G  PD  LL+
Sbjct: 732 DMFSSMQNAGCEPDSRLLN 750



 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 112/190 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F    + GL PD + YN ++ GYC + ++++A+++F+ +    ++PN + +  L++
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK GR+D+   +F +ML+KG K + + Y+ +IDG F++     A   + EM E+ I+ 
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +YSI++ GL K    +EA++ F      ++  D++T   +I G  +  R  EA  L+
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 191 DSMLRNGIMP 200
            S+ R+G++P
Sbjct: 700 ASISRSGLVP 709



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 118/207 (57%), Gaps = 1/207 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K C +D    LF  +   G+ PDI T+N +I  Y +   LD+A+ +F ++    +KP+ +
Sbjct: 374 KGCLVDMT-DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVV 432

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I A C+ G+MDDA   F++M+++G   +   Y CLI G+    ++  A ++  E+
Sbjct: 433 TYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI 492

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             N +  +IV +  +I+ LCK G + +A   F   ++  L PD V Y +L+ GYC  G+ 
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A++++D+M+  GI P+ +   TL +
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVN 579



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 114/200 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A     Q+ ++G+ PD  TYN +I GY S  +  EAV++F+++    + P+
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    L+ + CK G++ +A  +F  M  KG   +V +Y+ +++GY     +    D+++
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + I+P+I ++++LI      G++++A+  F+   D+ + P VVTY  +I   C+ G
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +AM+ ++ M+  G++PD
Sbjct: 446 KMDDAMEKFNQMIDQGVVPD 465



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 101/191 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A++ F Q+ D+G+ PD   Y+ +I G+C+   L +A +L  ++    ++ + + F  
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+  CK GR+ DA  +F   +  G   + V Y+ L+DGY     M+ A  V++ M    
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+V Y  L++G CK G ++E L  F   L   + P  + Y I+I G  +AGR   A 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 188 QLYDSMLRNGI 198
             +  M  +GI
Sbjct: 627 VKFHEMTESGI 637



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 97/177 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++ YNT+I G+     +++A  LF+++    + P+ +T++ ++ A CK   MD A   
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+ KG   +  TY+ LI GY  +   K A  V++EM   +I P++V+ + L+  LCK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G ++EA   F         PDV +Y I++ GY   G   +   L+D ML +GI PD
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 395



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 109/198 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F ++  + + PD++  NT++   C   ++ EA  +F+ +      P+  ++TI+++
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  +G + D T +F  ML  G   ++ T++ LI  Y     +  A  ++ EM ++ + P
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y  +I  LC+ G M++A+  F+  +D  ++PD   Y  LI+G+C  G   +A +L 
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ++ NG+  D +   ++
Sbjct: 490 SEIMNNGMRLDIVFFGSI 507



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 111/210 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++ + G+  DI+ + +II   C L R+ +A  +F+    V L P+++ + +L+D
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G+M+ A  +F  M+  G + NVV Y  L++GY K   +     ++ EM +  I P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+I+IDGL + G    A   FH   ++ +  +  TY+I++RG  K     EA+ L+
Sbjct: 605 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLF 664

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +    +  D + L+T+     Q+   +E
Sbjct: 665 KELRAMNVKIDIITLNTMIAGMFQTRRVEE 694



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 3/154 (1%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P S T+ IL+D   +  R + A   F ++L  G + + +  S L+ G+ +++    A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 118 DV-YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL--PDVVTYAILI 174
           D+      E    P++ SY+IL+  LC +G   +A        +   +  PDVV Y  +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+ K G   +A  L+  M++ GI PD +  S++
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A+ LF +L    ++ DIIT NT+I G     R++EA  LF  ++   L P 
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T++I+I    KEG +++A  MFS M   G + +    + ++    K   +  A     
Sbjct: 711 AVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 770

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           ++ E N S   ++  +L+D    +G   E +
Sbjct: 771 KIDERNFSLEHLTAMLLVDLFSSKGTCREQI 801


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 1/217 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A ++  ++  + + P+++TY+T+I GY    RLDEA+ LF ++    +  + +
Sbjct: 338 KGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRV 397

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+  + K GR ++A  +  +M   G K + VTY+ L+ GY K    +    V+EEM
Sbjct: 398 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 457

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN+++YS LID   K GL +EA+  F       L  DVV Y+ LI   CK G  
Sbjct: 458 KAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLV 517

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             A+   D M + GI P+ +  +++ D     SGS E
Sbjct: 518 ESAVSFLDEMTKEGIRPNVVTYNSIIDA-FGRSGSAE 553



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 113/202 (55%), Gaps = 3/202 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D A+K+F  +   GL+P+++TYN +I  CG   ++  + A ++F+++    ++P+ ITF 
Sbjct: 237 DEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVD-FNRAAEIFDEMLRNGVQPDRITFN 295

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+    + G  + A  +FS+ML +G + ++ TY+ L+D   K   M  AF +  EM   
Sbjct: 296 SLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK 355

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +I PN+V+YS +IDG  K G ++EAL  F+      +  D V+Y  L+  Y K GR  EA
Sbjct: 356 HIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEA 415

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + +   M  +GI  D +  + L
Sbjct: 416 LNVCKEMESSGIKKDAVTYNAL 437



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 3/204 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +F    + G    +  ++ +I  Y      DEA+++FE +    LKPN +T+ 
Sbjct: 200 QVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYN 259

Query: 67  ILIDAFCKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            +IDA C +G +D   A  +F +ML  G + + +T++ L+    +    ++A +++ EM 
Sbjct: 260 AVIDA-CGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEML 318

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
              I  +I +Y+ L+D +CK G M+ A          H++P+VVTY+ +I GY KAGR  
Sbjct: 319 YRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLD 378

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           EA+ L++ M    I  D +  +TL
Sbjct: 379 EALNLFNEMKFASIGLDRVSYNTL 402



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 64/115 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +   ++F ++    + P+++TY+T+I  Y       EA+++F +     LK + +
Sbjct: 443 KQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 502

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            ++ LIDA CK G ++ A     +M ++G + NVVTY+ +ID + +S + +   D
Sbjct: 503 LYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)

Query: 20  DRGLEPDIITYNTIICG---YCSLNR-------LDEAVQLFEKLTCVQLKPNSIT--FTI 67
           D+G++  ++ + + +CG   Y  L R         +A++ FE     + + N      + 
Sbjct: 131 DKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASA 190

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I    + G+++ A  +F   L +G    V  +S LI  Y +S     A  V+E M  + 
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250

Query: 128 ISPNIVSYSILIDGLCKRGL-MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + PN+V+Y+ +ID   K G+    A   F   L N + PD +T+  L+    + G    A
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L+  ML  GI  D    +TL D
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLD 334


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L  ++  +GL  D++TY TI+ G C +     A+ L  K+    +KP+ + ++ +ID
Sbjct: 29  AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 88

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK+G   DA  +FS+MLEKG   NV TY+C+IDG+        A  +  +M E  I+P
Sbjct: 89  RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 148

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++++ LI    K G + EA       L   + PD VTY  +I G+CK  R  +A  ++
Sbjct: 149 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 208

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M      PD +  +T+ D
Sbjct: 209 DLMAS----PDVVTFNTIID 224



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 111/203 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  +++ RGL  +  TYNT+I G+C ++ L+ A  LF+++    + P++IT  I
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  FC+  ++++A  +F  +       + V Y+ +I G  K   +  A+D++  +  + 
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 351

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++ +Y+++I G C +  + +A   FH   DN   PD  TY  LIRG  KAG   +++
Sbjct: 352 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 411

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M  NG   D   +  +AD
Sbjct: 412 ELISEMRSNGFSGDAFTIKMVAD 434



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 100/191 (52%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + + GL P +IT+NT+I G C   R+ EA  L  K+    L  + +T+  +++  CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              A  + SKM E   K +VV YS +ID   K  +   A  ++ EM E  I+PN+ +Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +IDG C  G   +A       ++  + PDV+T+  LI    K G+  EA +L D ML   
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 198 IMPDGLLLSTL 208
           I PD +  +++
Sbjct: 181 IFPDTVTYNSM 191



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 6/206 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D A  +F    D    PD++T+NTII  YC   R+DE +QL  +++   L  N+ 
Sbjct: 197 KHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 252

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  FC+   ++ A  +F +M+  G   + +T + L+ G+ +++ ++ A +++E +
Sbjct: 253 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 312

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
             + I  + V+Y+I+I G+CK   ++EA   F C+L  H + PDV TY ++I G+C    
Sbjct: 313 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSA 371

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
            ++A  L+  M  NG  PD    +TL
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTL 397



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 72/282 (25%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ H   A  LF ++ ++G+ P++ TYN +I G+CS  R  +A +L   +   ++ P+
Sbjct: 90  LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 149

Query: 62  SITFTILIDA-----------------------------------FCKEGRMDDATMMFS 86
            +TF  LI A                                   FCK  R DDA  MF 
Sbjct: 150 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 209

Query: 87  KML-------------------------------EKGPKANVVTYSCLIDGYFKSQNMKS 115
            M                                 +G  AN  TY+ LI G+ +  N+ +
Sbjct: 210 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 269

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
           A D+++EM  + + P+ ++ +IL+ G C+   +EEAL  F     + +  D V Y I+I 
Sbjct: 270 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 329

Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           G CK  +  EA  L+ S+  +G+ PD      +  YN+  SG
Sbjct: 330 GMCKGSKVDEAWDLFCSLPIHGVEPD------VQTYNVMISG 365



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 4/199 (2%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL L  ++ +  ++PD++ Y+ II   C      +A  LF ++    + PN  T+  +I
Sbjct: 63  SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 122

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           D FC  GR  DA  +   M+E+    +V+T++ LI    K   +  A  + +EM    I 
Sbjct: 123 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+ V+Y+ +I G CK    ++A + F    D    PDVVT+  +I  YC+A R  E MQL
Sbjct: 183 PDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQL 238

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              + R G++ +    +TL
Sbjct: 239 LREISRRGLVANTTTYNTL 257



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 85/146 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+AA  LF ++   G+ PD IT N ++ G+C   +L+EA++LFE +   ++  +++ + 
Sbjct: 266 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 325

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I   CK  ++D+A  +F  +   G + +V TY+ +I G+     +  A  ++ +M +N
Sbjct: 326 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 385

Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL 152
              P+  +Y+ LI G  K G +++++
Sbjct: 386 GHEPDNSTYNTLIRGCLKAGEIDKSI 411



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A  LF  L   G+EPD+ TYN +I G+C  + + +A  LF K+     +P++ 
Sbjct: 333 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 392

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           T+  LI    K G +D +  + S+M   G   +  T   + D
Sbjct: 393 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 434


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 117/218 (53%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   +  A +   ++ + G EPD +TYN+II GYC    + +A ++ +       KP+ 
Sbjct: 271 VRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+  LI+ FCK+G  D A  +F   L KG + ++V Y+ LI G  +   +  A  +  E
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNE 390

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M EN   PNI +Y+++I+GLCK G + +A +    A+     PD+ TY  LI GYCK  +
Sbjct: 391 MAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK 450

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              A ++ + M   G+ PD +  +TL +   ++  S+E
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 107/200 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ +F     +GL P I+ YNT+I G      +  A+QL  ++      PN  T+ ++
Sbjct: 347 DRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLV 406

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  CK G + DA+ +    + KG   ++ TY+ LIDGY K   + SA ++   M    +
Sbjct: 407 INGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGM 466

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P++++Y+ L++GLCK G  EE +  F    +    P+++TY I++   CKA +  EA+ 
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L   M   G+ PD +   TL
Sbjct: 527 LLGEMKSKGLKPDVVSFGTL 546



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAV---------QLFEKLTCVQLKPNSI 63
           +L G++  RG+ P++ T+N  + G C    LD AV         +   K+     +P+ +
Sbjct: 237 RLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID +CK+G + DA  +    + KG K +  TY  LI+G+ K  +   A  V+++ 
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+IV Y+ LI GL ++GL+  AL   +   +N  LP++ TY ++I G CK G  
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A  L D  +  G  PD    +TL D
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLID 443



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 1/191 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PDI TYNT+I GYC   +LD A ++  ++    + P+ IT+  L++  CK G+ ++
Sbjct: 429 KGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
              +F  M EKG   N++TY+ ++D   K++ +  A D+  EM    + P++VS+  L  
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548

Query: 141 GLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           G CK G ++ A   F      + +     TY I++  + +      AM+L+  M  +G  
Sbjct: 549 GFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608

Query: 200 PDGLLLSTLAD 210
           PD      + D
Sbjct: 609 PDNYTYRVVID 619



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 108/198 (54%), Gaps = 1/198 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  LD+A ++  ++  +G+ PD+ITYNT++ G C   + +E +++F+ +      PN I
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ I++D+ CK  ++++A  +  +M  KG K +VV++  L  G+ K  ++  A+ ++  M
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566

Query: 124 CEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
            +  ++     +Y+I++    ++  M  A+  F    ++   PD  TY ++I G+CK G 
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626

Query: 183 PTEAMQLYDSMLRNGIMP 200
            T+  +     +    +P
Sbjct: 627 ITQGYKFLLENMEKRFIP 644



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 15/218 (6%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A +LF ++  R L PD++ +N ++   C    + E+ +L  K+    + PN  TF I 
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 69  IDAFCKEGRMD---------DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           +   C+EG +D         +A     KM+  G + + +TY+ +IDGY K   ++ A  V
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            ++       P+  +Y  LI+G CK G  + A+  F   L   L P +V Y  LI+G  +
Sbjct: 318 LKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQ 377

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            G    A+QL + M  NG +P+      +  YNL  +G
Sbjct: 378 QGLILPALQLMNEMAENGCLPN------IWTYNLVING 409



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 9/208 (4%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AAL+L   + + G + + + Y T++ G       D A +LF+++    L P+ + F  L+
Sbjct: 164 AALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLV 223

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY---------FKSQNMKSAFDVY 120
              CK+G + ++  +  K+L++G   N+ T++  + G           ++  +  A +  
Sbjct: 224 HVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYL 283

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M      P+ ++Y+ +IDG CK+G++++A      A+     PD  TY  LI G+CK 
Sbjct: 284 RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD 343

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G P  AM ++   L  G+ P  +L +TL
Sbjct: 344 GDPDRAMAVFKDGLGKGLRPSIVLYNTL 371



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 1/201 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    +  +++F  + ++G  P+IITYN I+   C   +++EAV L  ++    LKP+
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV-TYSCLIDGYFKSQNMKSAFDVY 120
            ++F  L   FCK G +D A  +F +M ++    +   TY+ ++  + +  NM  A  ++
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M  +   P+  +Y ++IDG CK G + +        ++   +P + T+  ++   C  
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVK 659

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  EA+ +   ML+ GI+P+
Sbjct: 660 DKVHEAVGIIHLMLQKGIVPE 680



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 89/169 (52%), Gaps = 1/169 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K   ++ A+ L G++  +GL+PD++++ T+  G+C +  +D A QLF ++     +  
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCH 574

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + T+ I++ AF ++  M+ A  +FS M   G   +  TY  +IDG+ K  N+   +   
Sbjct: 575 TTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFL 634

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
            E  E    P++ ++  +++ LC +  + EA+   H  L   ++P+ V 
Sbjct: 635 LENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN 683



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 105/216 (48%), Gaps = 9/216 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+  F ++     +P + ++N I+         ++A +++ ++    ++ +  
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TI I +FCK  R   A  +   M E G  +N V Y  ++ G + S     A ++++EM
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG-- 181
               + P++V+++ L+  LCK+GL+ E+       L   + P++ T+ I ++G C+ G  
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 182 -------RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                  R  EA +    M+  G  PD L  +++ D
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK-- 59
           L K+ + D A+KLF  +    + PDI TYNT+I G C    L++A +L E++     K  
Sbjct: 107 LFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSA 166

Query: 60  PNSITFTILIDA-FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           P+ +T+  LI+A  CK+G +++A  +   M   GP  +V+TY+ +I     +  +  A +
Sbjct: 167 PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           + + M   + SP++V+++ L+DG CK G++  AL         ++LPDV+TY IL+ G C
Sbjct: 227 ILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           + G+   A  L + ++R G +PD +  ++L D  L  SG  E  
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD-GLCKSGEIEEA 326



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 126/230 (54%), Gaps = 16/230 (6%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ AL++   +   G  PD+ITYN+II   C   R+ EA ++ + ++C    P+ +
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLV 238

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  L+D FCK G +  A  +  +M  +    +V+TY+ L++G  +   ++ AF + EE+
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA-----------LYAFHCALDNHLLPDVVTYAI 172
                 P++++Y+ L+DGLCK G +EEA           + A   +++  ++P + TY I
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSIN--MVPPLFTYNI 356

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
           ++ G  K G  ++A+ L   ++  G +PD +  +TL D   +++  +E C
Sbjct: 357 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 406



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 35/215 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LIK+  +  A+ L   L  RG  PD++TYNT+I G C  NR+ EA  L +++  +   PN
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   ++   C+ GR+DD                                   A+ +  
Sbjct: 421 DVTLGSVVFGLCRVGRVDD-----------------------------------AWSLVV 445

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     +PN+V Y+ LIDGLCK   M++A           +  D   Y  LI      G
Sbjct: 446 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGG 505

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           R  EAM +YD M+  G +PDG    TL +  + +S
Sbjct: 506 RVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 540



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 6/213 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+K  H     K++  L   G  P+++T+  +I G C   +   A++    L    + P
Sbjct: 36  ILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAP 95

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +   F  LI    K+G  D A  +F  M       ++ TY+ +I G  KS N++ A ++ 
Sbjct: 96  DVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELL 155

Query: 121 EEMCE--NNISPNIVSYSILID-GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           EEM       +P+IV+Y+ LI+ G+CK G +EEAL            PDV+TY  +I   
Sbjct: 156 EEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHAL 215

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           C AGR  EA ++  +M      PD +  +TL D
Sbjct: 216 CVAGRVVEAAEILKTM---SCSPDLVTFNTLLD 245



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 44/243 (18%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++T+NT++ G+C    L  A+++ E++    + P+ IT+TIL++  C+ G++  A  +
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMK---------SAFDVYEEMCENNISPNIVSY 135
             +++ +G   +V+ Y+ L+DG  KS  ++         SA ++  EM   N+ P + +Y
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA--------------- 180
           +I++ GL K G + +A+      +    +PDVVTY  LI G CKA               
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414

Query: 181 --------------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
                               GR  +A  L   M R    P+ ++ ++L D   +S    +
Sbjct: 415 LGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDD 474

Query: 221 HCI 223
            C+
Sbjct: 475 ACV 477



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 3/186 (1%)

Query: 41  NRLDEAVQLFEKLTCVQ-LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           +R D A+Q F+        K +  ++  L+D   K G       ++  +L  G   N+VT
Sbjct: 5   SRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVT 64

Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
           +  LI G  K+     A +    + E +++P++  ++ LI GL K G  ++A+  F    
Sbjct: 65  FKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENME 124

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG--IMPDGLLLSTLADYNLQSSG 217
            + + PD+ TY  +I G CK+G   +A +L + M+R G    PD +  +TL +  +   G
Sbjct: 125 SSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDG 184

Query: 218 SQEHCI 223
             E  +
Sbjct: 185 DVEEAL 190



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 3/130 (2%)

Query: 74  KEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           +  R D A   F    E+ G K +V +Y+ L+D   KS +      VY+++  +  SPN+
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           V++ ILI G CK G    AL  F  ALD   + PDV  +  LI G  K G P +A++L++
Sbjct: 63  VTFKILIRGNCKAGQATRAL-EFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121

Query: 192 SMLRNGIMPD 201
           +M  + + PD
Sbjct: 122 NMESSRVNPD 131


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 116/204 (56%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A  L  Q+ ++G +P   TY  +I   C    +D+A  LF+++     KPN  T+T
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYT 340

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID  C++G++++A  +  KM++ G   +V+TY+ LI+GY K   +  AF++   M + 
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+ +++ L++GLC+ G   +A++     LDN L PD+V+Y +LI G C+ G    A
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVA 460

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L  SM    + PD L  + + +
Sbjct: 461 YKLLTSMNSFDLEPDCLTFTAIIN 484



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 7/204 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----TCVQ 57
           L K  + +AA     ++   G   D     +++ G+C    L +A+++F+ +    TC  
Sbjct: 205 LCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCA- 263

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             PNS++++ILI   C+ GR+++A  +  +M EKG + +  TY+ LI        +  AF
Sbjct: 264 --PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           ++++EM      PN+ +Y++LIDGLC+ G +EEA       + + + P V+TY  LI GY
Sbjct: 322 NLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGY 381

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
           CK GR   A +L   M +    P+
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPN 405



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 35/226 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L  ++ D GL PDI++YN +I G C    ++ A +L   +    L+P+ +TFT +I+
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIIN 484

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN--- 127
           AFCK+G+ D A+     ML KG   + VT + LIDG       + A  + E + +     
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLT 544

Query: 128 --------------------------------ISPNIVSYSILIDGLCKRGLMEEALYAF 155
                                           + P++V+Y+ L+DGL + G +  +    
Sbjct: 545 TPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRML 604

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                +  LP+V  Y I+I G C+ GR  EA +L  +M  +G+ P+
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 114/218 (52%), Gaps = 1/218 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D A    G +  +G+  D +T  T+I G C++ +  +A+ + E L  +++     
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPH 547

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           +  +++D   K  ++ +   M  K+ + G   +VVTY+ L+DG  +S ++  +F + E M
Sbjct: 548 SLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELM 607

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   PN+  Y+I+I+GLC+ G +EEA        D+ + P+ VTY ++++GY   G+ 
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667

Query: 184 TEAMQLYDSMLRNGI-MPDGLLLSTLADYNLQSSGSQE 220
             A++   +M+  G  + D +  S L  + L   G +E
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRE 705



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 94/179 (52%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++   G+ P +ITYN +I GYC   R+  A +L   +     KPN  TF  L++  C+ G
Sbjct: 361 KMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           +   A  +  +ML+ G   ++V+Y+ LIDG  +  +M  A+ +   M   ++ P+ ++++
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFT 480

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            +I+  CK+G  + A       L   +  D VT   LI G C  G+  +A+ + +++++
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVK 539



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%)

Query: 12  LKLFGQLTDRGLEPD-----IITYNTIICGYCSLNRLDEAVQLFE-KLTCVQLKPNSITF 65
           L     +T R +E D     +I Y TI+   C  N   EA ++F  K+  V    +S   
Sbjct: 175 LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK-NGYTEAAEMFMCKILKVGFLLDSHIV 233

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           T L+  FC+   + DA  +F  M  +G  A N V+YS LI G  +   ++ AF + ++M 
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E    P+  +Y++LI  LC RGL+++A   F   +     P+V TY +LI G C+ G+  
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIE 353

Query: 185 EAMQLYDSMLRNGIMP 200
           EA  +   M+++GI P
Sbjct: 354 EANGVCRKMVKDGIFP 369



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K C L   L + G++   GL P ++TY T++ G      +  + ++ E +      P
Sbjct: 555 MLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLP 614

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   +TI+I+  C+ GR+++A  + S M + G   N VTY+ ++ GY  +  +  A +  
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674

Query: 121 EEMCENNISPNIVSYSILIDG--LCKRGLME---EALYAFHCALDNHLLPDVVTYAILIR 175
             M E     N   YS L+ G  L ++G+ E   E +      ++            L+ 
Sbjct: 675 RAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVT 734

Query: 176 GYCKAGRPTEAMQLYDSMLRNGI 198
             CK GR  E+  L  ++L++G+
Sbjct: 735 RLCKEGRTDESNGLVQTILKSGV 757



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 107/218 (49%), Gaps = 3/218 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A +L   +  R  +P++ T+N ++ G C + +  +AV L +++    L P+ +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++ +LID  C+EG M+ A  + + M     + + +T++ +I+ + K      A      M
Sbjct: 443 SYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               IS + V+ + LIDG+C  G   +AL+     +   +L    +  +++    K  + 
Sbjct: 503 LRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKL 562

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS---SGS 218
            E + +   + + G++P  +  +TL D  ++S   SGS
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGS 600



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           I +  +++A CK G  + A M   K+L+ G   +    + L+ G+ +  N++ A  V++ 
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255

Query: 123 MC-ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           M  E   +PN VSYSILI GLC+ G +EEA        +    P   TY +LI+  C  G
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L+D M+  G  P+    + L D
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLID 344


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  A  +  ++ D+ + PD   Y T++ G+     LDEA +LF+ +    L P 
Sbjct: 463 LFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPG 522

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + + ++I  F K G MD+A +   KM       ++ T+S +IDGY K  NM +   ++ 
Sbjct: 523 VVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFG 582

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M + N  PN+V+Y+ LI+G C++G  + A   F     + L P VVTY+ILI  +CK  
Sbjct: 583 LMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEA 642

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A+  ++ ML N   P+
Sbjct: 643 KLGKAVSYFELMLINKCTPN 662



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 101/195 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++  +KL      +G  P+I+ YNT+I GYC    ++ A +LF+KL      P   TF 
Sbjct: 223 RIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFG 282

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L++ FCK G  +   ++  +M ++G   NV  Y+ +ID  +K      A D  +EM EN
Sbjct: 283 SLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSEN 342

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+Y+ LI+  C RG +EEA       +   L P+ +TY  L+ GYCK G  T+A
Sbjct: 343 CCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKA 402

Query: 187 MQLYDSMLRNGIMPD 201
                 M  +G+  D
Sbjct: 403 TDYLIEMSTSGLEVD 417



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 107/207 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D AL +  ++ +RG+ PD   YN ++ G     +L  A  +  ++    + P+
Sbjct: 428 LVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPD 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  L+D F + G +D+A  +F  ++EKG    VV Y+ +I G+ KS  M +A    +
Sbjct: 488 AFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCID 547

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   +  P+I ++S +IDG  K+  M   L  F   +  +  P+VVTY  LI GYC+ G
Sbjct: 548 KMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKG 607

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A +L+  M  +G+ P  +  S L
Sbjct: 608 ETKMAEKLFSMMRSHGLKPSVVTYSIL 634



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 97/177 (54%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           EPD++TYNT+I  +CS   ++EA +L E+     L PN +T+T L+  +CK+G    AT 
Sbjct: 345 EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
              +M   G + ++++Y  LI G   +  + +A  + + M    I P+   Y++L++GL 
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           K+G +  A       LD ++ PD   YA L+ G+ + G   EA +L+  ++  G+ P
Sbjct: 465 KKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDP 521



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 4/205 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A KL  Q   RGL P+ +TY  ++ GYC      +A     +++   L+ + I++  
Sbjct: 364 VEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGA 423

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG--PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           LI      G +D A  +  +M+ +G  P AN+  Y+ L++G FK   +  A  +  EM +
Sbjct: 424 LIHGLVVAGEVDTALTIRDRMMNRGILPDANI--YNVLMNGLFKKGKLSMAKVMLTEMLD 481

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            NI+P+   Y+ L+DG  + G ++EA   F   ++  L P VV Y ++I+G+ K+G    
Sbjct: 482 QNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDN 541

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+   D M R   +PD    ST+ D
Sbjct: 542 AILCIDKMRRAHHVPDIFTFSTIID 566



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            I+  +LD A KLF  + ++GL+P ++ YN +I G+     +D A+   +K+      P+
Sbjct: 498 FIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPD 557

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF+ +ID + K+  M+    +F  M+++  K NVVTY+ LI+GY +    K A  ++ 
Sbjct: 558 IFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFS 617

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            M  + + P++V+YSILI   CK   + +A+  F   L N   P+   +  L+ G+
Sbjct: 618 MMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 106/194 (54%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           +++  GLE D+I+Y  +I G      +D A+ + +++    + P++  + +L++   K+G
Sbjct: 408 EMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKG 467

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++  A +M ++ML++    +   Y+ L+DG+ +  N+  A  +++ + E  + P +V Y+
Sbjct: 468 KLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYN 527

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ++I G  K G+M+ A+         H +PD+ T++ +I GY K       ++++  M++ 
Sbjct: 528 VMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 587

Query: 197 GIMPDGLLLSTLAD 210
              P+ +  ++L +
Sbjct: 588 NCKPNVVTYTSLIN 601



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 14/232 (6%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+ +++A LK+FG +  +  +P+++TY ++I GYC       A +LF  +    LKP+ 
Sbjct: 569 VKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSV 628

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS------------ 110
           +T++ILI +FCKE ++  A   F  ML      N   +  L++G+  +            
Sbjct: 629 VTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNL 688

Query: 111 -QNMKSAF-DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            +N +S F D +  M  +  +    +Y+ ++  LC++ +++ AL   +  L   L  D V
Sbjct: 689 HENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAV 748

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++  LI G C  G   E   +    L  G +   L  S   D  +   G  E
Sbjct: 749 SFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISE 800


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 114/198 (57%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   ++  LK+  ++  +G E   +TYNTII G      L EA+ L+ KL      P   
Sbjct: 823  KSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPC 882

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            T+  L+D   K+G+++DA  +F +ML+ G K N   Y+ L++GY  + N +   ++++ M
Sbjct: 883  TYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM 942

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  I+P+I SY++LI  LC  G + ++L  F    +  L PD++TY +LI G  ++GR 
Sbjct: 943  VDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRL 1002

Query: 184  TEAMQLYDSMLRNGIMPD 201
             EA+ L++ M ++GI P+
Sbjct: 1003 EEAVSLFNDMEKSGIAPN 1020



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 108/200 (54%)

Query: 2    LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            L+K+  ++ A  LF ++ D G +P+   YN ++ GY      ++  +LF+ +    + P+
Sbjct: 891  LLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPD 950

Query: 62   SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++T+LI A C  GR++D+   F ++ E G + +++TY+ LI G  +S  ++ A  ++ 
Sbjct: 951  IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFN 1010

Query: 122  EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +M ++ I+PN+ +Y+ LI  L K G   EA   +   L N   P+V TY  LI GY  +G
Sbjct: 1011 DMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSG 1070

Query: 182  RPTEAMQLYDSMLRNGIMPD 201
                A   Y  M+  G  P+
Sbjct: 1071 STDNAFASYGQMIVGGCPPN 1090



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 108/211 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++  + L  ++ D G++P++ +Y   I       R +EA ++ +K+     KP+ +T T+
Sbjct: 232 VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTV 291

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C  GR+ DA  +F KM     K + VTY  L+D    + + +S  +++  M  + 
Sbjct: 292 LIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADG 351

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + N+V+Y+ ++D LC+ G ++EA   F       + P   +Y  LI G+ KA R   A+
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHAL 411

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
           +L++ M  +G  P+G       +Y  +S  S
Sbjct: 412 ELFNHMNIHGPTPNGYTYVLFINYYGKSGES 442



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 99/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  +    G+     +YN +ICG    N +D A  LF ++  +   P+  T+ +++D
Sbjct: 760 AHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILD 819

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K  R++D   +  +M  KG ++  VTY+ +I G  KS+ +  A D+Y ++     SP
Sbjct: 820 AMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSP 879

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y  L+DGL K G +E+A   F   LD    P+   Y IL+ GY  AG   +  +L+
Sbjct: 880 TPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELF 939

Query: 191 DSMLRNGIMPD 201
            +M+  GI PD
Sbjct: 940 QNMVDQGINPD 950



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 101/201 (50%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           + ++++  +   G   +++ Y  ++   C + R+DEA  +F+++    ++P   ++  LI
Sbjct: 339 SVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLI 398

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
             F K  R++ A  +F+ M   GP  N  TY   I+ Y KS     A   YE M    I 
Sbjct: 399 SGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIV 458

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+ + ++  L K G +  A   FH      + PD +TY ++I+   KA    EAM++
Sbjct: 459 PDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKV 518

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +  M+    +PD L +++L D
Sbjct: 519 FSEMIETRCVPDVLAVNSLID 539



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+K +  +  +G+ PD++  N ++       RL  A ++F +L  + + P++IT+T++I 
Sbjct: 445 AIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIK 504

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K    D+A  +FS+M+E     +V+  + LID  +K+     A+ ++ E+ E N+ P
Sbjct: 505 CCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDP 564

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
              +Y+ L+ GL + G ++E ++       N   P+++TY  ++   CK G    A+ + 
Sbjct: 565 TDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGML 624

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +M   G MPD      L+ YN    G
Sbjct: 625 YNMTMKGCMPD------LSSYNTALHG 645



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 86/158 (54%)

Query: 13   KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
            +LF  + D+G+ PDI +Y  +I   C+  RL++++  F +LT + L+P+ IT+ +LI   
Sbjct: 937  ELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGL 996

Query: 73   CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
             + GR+++A  +F+ M + G   N+ TY+ LI    K      A  +YEE+ +N   PN+
Sbjct: 997  GRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNV 1056

Query: 133  VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
             +Y+ LI G    G  + A  ++   +     P+  TY
Sbjct: 1057 FTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 73/129 (56%)

Query: 7    HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
             L+ +L  F QLT+ GLEPD+ITYN +I G     RL+EAV LF  +    + PN  T+ 
Sbjct: 966  RLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYN 1025

Query: 67   ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             LI    KEG+  +A  M+ ++L+ G K NV TY+ LI GY  S +  +AF  Y +M   
Sbjct: 1026 SLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVG 1085

Query: 127  NISPNIVSY 135
               PN  +Y
Sbjct: 1086 GCPPNSSTY 1094



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 20/231 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A ++F +L   G+ PD ITY  +I      +  DEA+++F ++   +  P+
Sbjct: 471 LAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPD 530

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +    LID   K GR ++A  +F ++ E        TY+ L+ G  +   +K    + E
Sbjct: 531 VLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLE 590

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM  N+  PN+++Y+ ++D LCK G +  AL   +       +PD+ +Y   + G  K  
Sbjct: 591 EMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKED 650

Query: 182 RPTEAMQLY------------------DSMLRNGIMPDGLLLSTLADYNLQ 214
           R TEA +++                   S ++NG+M +   L TL +Y LQ
Sbjct: 651 RLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEA--LHTLKEYILQ 699



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 35/239 (14%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A  +F Q+  +G+EP   +YN++I G+   +RL+ A++LF  +      PN  T+ 
Sbjct: 371 RVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYV 430

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVV---------------------------- 98
           + I+ + K G    A   +  M  KG   +VV                            
Sbjct: 431 LFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSI 490

Query: 99  -------TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                  TY+ +I    K+ N   A  V+ EM E    P++++ + LID L K G   EA
Sbjct: 491 GVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEA 550

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              FH   + +L P   TY  L+ G  + G+  E M L + M  N   P+ +  +T+ D
Sbjct: 551 WKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLD 609



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 35/238 (14%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +    + A K+  ++ D G +PD++T   +I   C   R+ +A  +F K+     KP
Sbjct: 260 VLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKP 319

Query: 61  NSITF-----------------------------------TILIDAFCKEGRMDDATMMF 85
           + +T+                                   T ++DA C+ GR+D+A+ +F
Sbjct: 320 DRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVF 379

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M +KG +    +Y+ LI G+ K+  +  A +++  M  +  +PN  +Y + I+   K 
Sbjct: 380 DQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKS 439

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           G   +A+  +       ++PDVV    ++    K+GR   A +++  +   G+ PD +
Sbjct: 440 GESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNI 497



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 10/196 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYC-----SLNRLDEAVQLFEKLTCVQLKPNSITF 65
           AL+LF  +     +P I+ + T  C Y      +  R+ +  Q+F+ +    +K N  TF
Sbjct: 95  ALQLFKSVAQ---QPRIV-HTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTF 150

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
             +  +   EG +  A +    M E G   N  TY+ LI    KS   + A +VY+ M  
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           + I P++ +YS+L+    KR + E  ++      D+ + P+V +Y I IR   +AGR  E
Sbjct: 211 DGIVPSVRTYSVLMLAFGKRDV-ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEE 269

Query: 186 AMQLYDSMLRNGIMPD 201
           A ++   M   G  PD
Sbjct: 270 AYKILQKMEDEGCKPD 285



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           NS T+  LI    K G   +A  ++  M   G   +V TYS L+  + K +++++   + 
Sbjct: 181 NSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLL 239

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM ++ + PN+ SY+I I  L + G  EEA        D    PDVVT  +LI+  C A
Sbjct: 240 REMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDA 299

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR ++A  ++  M  +   PD +   TL D
Sbjct: 300 GRVSDAKDVFWKMKASDQKPDRVTYITLLD 329



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 76/164 (46%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C   +  EA +L +K   + +   + ++  LI     E  +D A  +FS+M   G   + 
Sbjct: 752 CKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDE 811

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TY+ ++D   KS  ++    V +EM         V+Y+ +I GL K  ++ EA+  ++ 
Sbjct: 812 FTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYK 871

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +     P   TY  L+ G  K G+  +A  L+D ML  G  P+
Sbjct: 872 LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPN 915


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 115/219 (52%), Gaps = 1/219 (0%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E  +  A+KL  ++  RG +PD++TYN ++ G C   RLDEA++    +     +PN IT
Sbjct: 29  ESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVIT 88

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
             I++ + C  GR  DA  + ++M+ KG   +VVT++ LI+   +   +  A D+ E+M 
Sbjct: 89  HNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMP 148

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            +  +PN +SY+ L+ G CK   M+ A+      +     PD+VTY  ++   CK G+  
Sbjct: 149 THGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVD 208

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            A++L + +   G  P  +  +T+ D  L   G  +  +
Sbjct: 209 AAVELLNQLSSKGCSPVLITYNTVID-GLSKVGKTDQAV 246



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 105/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL  ++  +G  P ++T+N +I   C    L  A+ + EK+      PNS+++  L+ 
Sbjct: 105 AEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLH 164

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCKE +MD A      M+ +G   ++VTY+ ++    K   + +A ++  ++     SP
Sbjct: 165 GFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSP 224

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            +++Y+ +IDGL K G  ++A+   H      L PDV+TY+ LI G  + G+  EA++ +
Sbjct: 225 VLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFF 284

Query: 191 DSMLRNGIMPDGLLLSTL 208
             +   G+ P+    +++
Sbjct: 285 HDVEGFGVKPNAFTYNSI 302



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L  ++      P+ +
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++G +  A  +  KM   G   N ++Y+ L+ G+ K + M  A    E M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ ++  LCK G ++ A+   +        P ++TY  +I G  K G+ 
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            +A++L   M   G+ PD +  S+L    L   G  E  I
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLI-AGLSREGKVEEAI 281



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 102/193 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +  ++   G  P+ ++YN ++ G+C   ++D A+Q  E +      P+ +T+  
Sbjct: 137 LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++ A CK+G++D A  + +++  KG    ++TY+ +IDG  K      A ++  EM    
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++++YS LI GL + G +EEA+  FH      + P+  TY  ++ G CKA +   A+
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAI 316

Query: 188 QLYDSMLRNGIMP 200
                M+  G  P
Sbjct: 317 DFLAYMISKGCKP 329



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 100/196 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A++    +  RG  PDI+TYNT++   C   ++D AV+L  +L+     P  I
Sbjct: 168 KEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+ D A  +  +M  KG K +V+TYS LI G  +   ++ A   + ++
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN  +Y+ ++ GLCK    + A+      +     P  V+Y ILI G    G  
Sbjct: 288 EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLA 347

Query: 184 TEAMQLYDSMLRNGIM 199
            EA++L + +   G++
Sbjct: 348 KEALELLNELCSRGVV 363



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 109/196 (55%), Gaps = 4/196 (2%)

Query: 17  QLTDRGLE----PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++ DR LE    PD+ITY  +I   C+ + + +A++L +++     KP+ +T+ +L++  
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CKEGR+D+A    + M   G + NV+T++ ++     +     A  +  EM     SP++
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+++ILI+ LC++GL+  A+        +   P+ ++Y  L+ G+CK  +   A+Q  + 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 193 MLRNGIMPDGLLLSTL 208
           M+  G  PD +  +T+
Sbjct: 182 MVSRGCYPDIVTYNTM 197



 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 87/151 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +DAA++L  QL+ +G  P +ITYNT+I G   + + D+AV+L  ++    LKP+
Sbjct: 201 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPD 260

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ LI    +EG++++A   F  +   G K N  TY+ ++ G  K+Q    A D   
Sbjct: 261 VITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLA 320

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
            M      P  VSY+ILI+G+   GL +EAL
Sbjct: 321 YMISKGCKPTEVSYTILIEGIANEGLAKEAL 351



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 48/91 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++ A+K F  +   G++P+  TYN+I+ G C   + D A+     +     KP 
Sbjct: 271 LSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPT 330

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
            +++TILI+    EG   +A  + +++  +G
Sbjct: 331 EVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           L+    PDV+TY ILI   C      +AM+L D M   G  PD +  + L +
Sbjct: 8   LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN 59


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 122/209 (58%), Gaps = 4/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             KE   D+A++ + ++++ G+ P+++T+ ++I G+C  NR+D A+++  ++    LK +
Sbjct: 600 FFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLD 659

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  LID FCK+  M  A  +FS++LE G   NV  Y+ LI G+     M +A D+Y+
Sbjct: 660 VPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYK 719

Query: 122 EMCENNISPNIVSYSILIDGLCKRG--LMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           +M  + IS ++ +Y+ +IDGL K G  ++   LY+   AL   ++PD + Y +L+ G  K
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALG--IVPDEILYVVLVNGLSK 777

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G+   A ++ + M +    P+ L+ ST+
Sbjct: 778 KGQFVRASKMLEEMKKKDATPNVLIYSTV 806



 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 36/237 (15%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+  +DAA      + ++G+EP+++ YN ++  +C +  +D A  +F ++    L+P
Sbjct: 458 LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQP 517

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVV---------------------- 98
           N+ T++ILID F K     +A  + ++M+    +AN V                      
Sbjct: 518 NNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEML 577

Query: 99  --------------TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                         +Y+ +IDG+FK  +  SA + Y EM EN ISPN+V+++ LI+G CK
Sbjct: 578 QNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCK 637

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              M+ AL   H      L  DV  Y  LI G+CK      A  L+  +L  G+MP+
Sbjct: 638 SNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPN 694



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 100/182 (54%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
           +YN+II G+      D AV+ + +++   + PN +TFT LI+ FCK  RMD A  M  +M
Sbjct: 592 SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEM 651

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
             K  K +V  Y  LIDG+ K  +MK+A+ ++ E+ E  + PN+  Y+ LI G    G M
Sbjct: 652 KSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKM 711

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           + A+  +   +++ +  D+ TY  +I G  K G    A  LY  +L  GI+PD +L   L
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVL 771

Query: 209 AD 210
            +
Sbjct: 772 VN 773



 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 22/211 (10%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +AAL++F    +  +    +  N I    C   ++D A      +    ++PN + +  +
Sbjct: 432 EAALEIFNDSFETWIAHGFMC-NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNM 490

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + A C+   MD A  +FS+MLEKG + N  TYS LIDG+FK+Q+ ++A++V  +M  +N 
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNF 550

Query: 129 SPNIVSYSILIDGLCKRG-----------LMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             N V Y+ +I+GLCK G           L++E  Y+  C           +Y  +I G+
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGC----------TSYNSIIDGF 600

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            K G    A++ Y  M  NGI P+ +  ++L
Sbjct: 601 FKEGDTDSAVEAYREMSENGISPNVVTFTSL 631



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 109/217 (50%), Gaps = 1/217 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE +++ A+K+  ++   G+   +I   ++I G+C+ N L +A+  F ++    L P+ 
Sbjct: 321 VKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDK 380

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + F+++I+ FCK   M+ A  ++ +M   G   + V    +I G  K+++ ++A +++ +
Sbjct: 381 VMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFND 440

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E  I+   +   I +  LCK+G ++ A        +  + P+VV Y  ++  +C+   
Sbjct: 441 SFETWIAHGFMCNKIFL-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKN 499

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
              A  ++  ML  G+ P+    S L D   ++   Q
Sbjct: 500 MDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQ 536



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 2/186 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  LF +L + GL P++  YN +I G+ +L ++D A+ L++K+    +  +  
Sbjct: 672 KKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T +ID   K+G +  A+ ++S++L  G   + + Y  L++G  K      A  + EEM
Sbjct: 732 TYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEM 791

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + + +PN++ YS +I G  + G + EA       L+  L+ D   + +L+ G  +  +P
Sbjct: 792 KKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG--RVEKP 849

Query: 184 TEAMQL 189
             A ++
Sbjct: 850 PAAAKI 855



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 1/197 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++E   + A+K+F ++  RG EPD + ++  +   C +  L  A+ L  ++      P S
Sbjct: 250 LRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPAS 309

Query: 63  I-TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T +I A  KEG M++A  +  +M+  G   +V+  + LI G+     +  A D + 
Sbjct: 310 QETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFN 369

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  ++P+ V +S++I+  CK   ME+A+  +       + P  V    +I+G  KA 
Sbjct: 370 RMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAE 429

Query: 182 RPTEAMQLYDSMLRNGI 198
            P  A+++++      I
Sbjct: 430 SPEAALEIFNDSFETWI 446



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 106/208 (50%), Gaps = 1/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +D A +++ ++   G+  D +T   ++       + +EA+++F ++     +P+
Sbjct: 214 LVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPD 273

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + F++ + A CK   +  A  +  +M EKG   A+  TY+ +I    K  NM+ A  V 
Sbjct: 274 GLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVK 333

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM    I  ++++ + LI G C    + +AL  F+   +  L PD V ++++I  +CK 
Sbjct: 334 DEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKN 393

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +A+++Y  M   GI P  +L+  +
Sbjct: 394 MEMEKAVEIYKRMKSVGIAPSSVLVHKM 421



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 104/210 (49%), Gaps = 1/210 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+   +D A+  F  + DR + P +   N ++      N +DEA +++ K+  + +  ++
Sbjct: 180 IRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDN 239

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T  +L+ A  +E + ++A  +F +++ +G + + + +S  +    K +++  A D+  E
Sbjct: 240 VTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLRE 299

Query: 123 MCENNISP-NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           M E    P +  +Y+ +I    K G MEEA+      +   +   V+    LI G+C   
Sbjct: 300 MREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGN 359

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              +A+  ++ M   G+ PD ++ S + ++
Sbjct: 360 ELGKALDFFNRMEEEGLAPDKVMFSVMIEW 389



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 54/105 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+ +L  A  L+ +L   G+ PD I Y  ++ G     +   A ++ E++      PN
Sbjct: 740 LLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPN 799

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
            + ++ +I    +EG +++A  +  +MLEKG   +   ++ L+ G
Sbjct: 800 VLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844



 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 35/146 (23%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S  F  L++A+ +  RMD                                    A D +
Sbjct: 168 SSRAFNYLLNAYIRNRRMD-----------------------------------YAVDCF 192

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M + N+ P +   + ++  L +  L++EA   ++  +   +  D VT  +L+R   + 
Sbjct: 193 NLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRE 252

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +P EAM+++  ++  G  PDGLL S
Sbjct: 253 RKPEEAMKIFRRVMSRGAEPDGLLFS 278


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 113/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++  ++   G+ P+  TY +++ G+CS  +L EA++  EK+    ++PN
Sbjct: 243 LCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPN 302

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++  +D  CK GR  +A  +F  M+++G K ++ TYS L+ GY     +     +++
Sbjct: 303 VVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFD 362

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++++ P+   ++ LI    K+G ++EA+  F       L P+ VTY  LI GYCK  
Sbjct: 363 LMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKIT 422

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R   A+ L+  M+ NG+ P+
Sbjct: 423 RMENALALFQEMVSNGVSPN 442



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 9/211 (4%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL----FEKLTCVQLKPNS 62
            LD      G +  +G   + I +N ++ G C+  R D+A+ +      +L CV   PN 
Sbjct: 105 RLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCV---PNV 161

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + TI++   C E R  +A  +   M + G     NVV+YS + DG  K  +   A+  Y
Sbjct: 162 FSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATY 221

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM +  I PN+V+YS +I  LCK   M++A+      + N + P+  TY  L+ G+C +
Sbjct: 222 REMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSS 281

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           G+ TEA++  + M  NG+ P+ +  S+  DY
Sbjct: 282 GQLTEAIKFLEKMCSNGVEPNVVTYSSFMDY 312



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           L  E     AL+L   + D G    P++++Y+T+  G       D+A   + ++   ++ 
Sbjct: 171 LCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRIL 230

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PN +T++ +I A CK   MD A  +  +M++ G   N  TY+ L+ G+  S  +  A   
Sbjct: 231 PNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKF 290

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E+MC N + PN+V+YS  +D LCK G   EA   F+  +   L PD+ TY+ L+ GY  
Sbjct: 291 LEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAI 350

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   E   L+D M+++ + PD  + +TL
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTL 379



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 89/145 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A K+F  +  RGL+PDI TY++++ GY     L E   LF+ +    ++P+
Sbjct: 313 LCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPD 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F  LI A  K+G++D+A ++FSKM  +G K N VTY+ LI+GY K   M++A  +++
Sbjct: 373 HYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQ 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRG 146
           EM  N +SPN ++Y+I++ GL + G
Sbjct: 433 EMVSNGVSPNFITYNIMLQGLFRTG 457



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 43/254 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT---CVQLKPNSITFTI 67
           AL +F +L  RG+   I + N  +      N    AV  F ++       + P   T+ I
Sbjct: 37  ALDVFDELLRRGIGAPIRSLNGALADVARDNPA-AAVSRFNRMARAGASMVTPTVHTYGI 95

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY------- 120
           LI   C  GR+D        +++KG +   + ++ L+ G    +    A D+        
Sbjct: 96  LIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTEL 155

Query: 121 -------------EEMCENNIS------------------PNIVSYSILIDGLCKRGLME 149
                        + +C  N S                  PN+VSYS + DGL K G  +
Sbjct: 156 GCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPD 215

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +A   +   LD  +LP+VVTY+ +I   CK     +AM+++D M++NG+ P+    ++L 
Sbjct: 216 KAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLV 275

Query: 210 DYNLQSSGSQEHCI 223
            +   SSG     I
Sbjct: 276 -HGFCSSGQLTEAI 288



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 57/91 (62%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A+ +F ++  +GL+P+ +TYNT+I GYC + R++ A+ LF+++    + PN I
Sbjct: 385 KQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFI 444

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPK 94
           T+ I++    + GR   A   + ++++ G K
Sbjct: 445 TYNIMLQGLFRTGRTGTAKEFYVQIIKSGKK 475


>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Brachypodium distachyon]
          Length = 476

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLK 59
           L+   HL  A  L   +   G  P   TYN ++  +CS     +++AV+LF  +     K
Sbjct: 136 LVSHSHLPLAHSLLADMRAGGFAPTTATYNVLLKAHCSDASAPIEDAVRLFRNIP----K 191

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P++ ++  +ID  C+  R  DA  +FS+M+  G    VVTY+ +I+   +   +  A  +
Sbjct: 192 PDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKM 251

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++EM    I+PN+V+YS LIDGLCK G    AL           LP+ +TY+ +I G CK
Sbjct: 252 FDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCK 311

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             R  EAM++ D M   G  PD  L   L
Sbjct: 312 EDRLNEAMEVLDRMRLQGRKPDAGLFGKL 340



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F ++   G+ P ++TY T+I        LD+A+++F+++  + + PN +T++ LID
Sbjct: 213 AQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLID 272

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK GR   A  +  +M ++    N +TYS +I+G  K   +  A +V + M      P
Sbjct: 273 GLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKP 332

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR-------GYCKAGRP 183
           +   +  LI GLC  G   EA       + + + P+ VT+++ +R         C  G  
Sbjct: 333 DAGLFGKLIVGLCGAGRAVEAANYLDEMVLSGVEPNRVTWSLHVRINDAVVTALCAKGEA 392

Query: 184 TEAMQLYDSMLRNGI 198
               ++Y SM   GI
Sbjct: 393 GRTFRVYQSMRTRGI 407



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 7/208 (3%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L ++  LD ALK+F ++   G+ P+++TY+++I G C   R   A++L +++      P
Sbjct: 238 WLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLP 297

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+IT++ +I+  CKE R+++A  +  +M  +G K +   +  LI G   +     A +  
Sbjct: 298 NTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYL 357

Query: 121 EEMCENNISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           +EM  + + PN V++S+       ++  LC +G        +       +  +  T+ +L
Sbjct: 358 DEMVLSGVEPNRVTWSLHVRINDAVVTALCAKGEAGRTFRVYQSMRTRGISTEPGTFHLL 417

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +  + K     +A  +   ML    +P+
Sbjct: 418 VEFFSKKNDLEKAAHVVLDMLSEKCIPE 445



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 8/204 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI-TFT 66
           L  +  LF    D  LEP  +T   ++  +   +R   A+QLF         P+S  ++T
Sbjct: 76  LSRSRALFPSAAD--LEPPFLT---LLRAFSRTHRPLAALQLFRSAPSALALPHSARSYT 130

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++        +  A  + + M   G      TY+ L+  +    +  +  +    +  N
Sbjct: 131 AVLATLVSHSHLPLAHSLLADMRAGGFAPTTATYNVLLKAH--CSDASAPIEDAVRLFRN 188

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+  SY+ +IDGLC+R    +A   F   + N + P VVTY  +I    + G   +A
Sbjct: 189 IPKPDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDA 248

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           ++++D M R GI P+ +  S+L D
Sbjct: 249 LKMFDEMGRIGIAPNVVTYSSLID 272



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 15/154 (9%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKA-----NVVTYSCLIDGYFKSQNMKSAFDV 119
           F  L+ AF +  R   A  +F       P A     +  +Y+ ++       ++  A  +
Sbjct: 93  FLTLLRAFSRTHRPLAALQLF----RSAPSALALPHSARSYTAVLATLVSHSHLPLAHSL 148

Query: 120 YEEMCENNISPNIVSYSILIDGLCK--RGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
             +M     +P   +Y++L+   C      +E+A+  F     N   PD  +Y  +I G 
Sbjct: 149 LADMRAGGFAPTTATYNVLLKAHCSDASAPIEDAVRLFR----NIPKPDACSYNTVIDGL 204

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           C+  R  +A +++  M+ NG+ P  +  +T+ ++
Sbjct: 205 CRRSRRADAQEIFSEMVANGVAPTVVTYTTVINW 238


>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           diamantinensis]
          Length = 284

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 107/185 (57%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  A  +F  +T  GL P +++YNT++ GY  L  LDE  +L   +    ++P+  
Sbjct: 99  KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVY 158

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++++LI+  CKE +MDDA  +F +ML KG   N VT++ LIDG+ K   +  A ++Y+ M
Sbjct: 159 SYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRM 218

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ P++++Y+ LI GLCK+G +++A           L PD +TY  LI G CK G  
Sbjct: 219 LSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLIDGCCKEGNL 278

Query: 184 TEAMQ 188
             A +
Sbjct: 279 DTAFE 283



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 113/209 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  +       + ++ + G    +  +N ++  +C    +  A  +F+ +T   L+P+
Sbjct: 62  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 121

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L++ + + G +D+   + S ML  G + +V +YS LI+G  K   M  A ++++
Sbjct: 122 VVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFD 181

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PN V+++ LIDG CK+G ++ A+  +   L   LLPD++TY  LI G CK G
Sbjct: 182 EMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKG 241

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A  L D M   G+ PD +  +TL D
Sbjct: 242 DLKQANDLIDEMGMKGLKPDKITYTTLID 270



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 72/117 (61%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +D A +LF ++  +GL P+ +T+ T+I G+C   R+D A+++++++    L P+
Sbjct: 167 LCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPD 226

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            IT+  LI   CK+G +  A  +  +M  KG K + +TY+ LIDG  K  N+ +AF+
Sbjct: 227 LITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLIDGCCKEGNLDTAFE 283



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F+ LI A+ + G   DA   +    E        T   +++   K +  K  +  YEE+
Sbjct: 19  VFSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 78

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E     ++  ++IL+   CK G +  A   F       L P VV+Y  L+ GY + G  
Sbjct: 79  LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDL 138

Query: 184 TEAMQLYDSMLRNGIMPD 201
            E  +L  +ML +G+ PD
Sbjct: 139 DEGFRLKSAMLASGVQPD 156


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 3/204 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D+AL+LF  +     +P+ ITY T++ G C+  RLD A +L  ++      PN +TF 
Sbjct: 440 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+  FC++G MD+A  +  +M+E G   N++TY+ L+DG     N + A ++   +  N
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSN 556

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP+IV+YS +I  L +   +EEA+  FH   D  + P  V Y  ++   CK      A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +  M+ NG MP+ L   TL +
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIE 640



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 3/217 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A +    +   G  PD I+Y T++ G C   R ++A +L +++      PN +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF   I   C++G ++ ATM+  +M E G + N+VTY+ L++G+     + SA +++  M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN ++Y+ L+ GLC    ++ A       L     P+VVT+ +L+  +C+ G  
Sbjct: 452 ---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            EA++L + M+ +G  P+ +  +TL D       S+E
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 3/201 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++       G   D+  YNT++ GYC   +LD A +L   +    + P++ T+T +I 
Sbjct: 97  AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIR 153

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR+ +A  +   ML +G + +VVTY+ L++   KS     A +V +EM     +P
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP 213

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+Y+++I+G+C+ G +++A    +        PD V+Y  +++G C A R  +  +L+
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 191 DSMLRNGIMPDGLLLSTLADY 211
             M+    MP+ +    L  +
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRF 294



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 109/205 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      A+++  ++  +G  P+I+TYN II G C   R+D+A +   +L+    +P+++
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++T ++   C   R +D   +F++M+EK    N VT+  L+  + +   ++ A  V E+M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  + N    +I+I+ +CK+G +++A    +        PD ++Y  +++G C+A R 
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A +L   M+R    P+ +  +T 
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTF 396



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 35/227 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + +E  +D A +   +L+  G +PD ++Y T++ G C+  R ++  +LF ++      PN
Sbjct: 225 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 284

Query: 62  SITF-----------------------------------TILIDAFCKEGRMDDATMMFS 86
            +TF                                    I+I+  CK+GR+DDA    +
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   + ++Y+ ++ G  +++  + A ++ +EM   N  PN V+++  I  LC++G
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           L+E+A        ++    ++VTY  L+ G+C  GR   A++L+ SM
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451



 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA +L   +    + PD  TY  II G C   R+ EA+ L + +     +P+ +T+T
Sbjct: 128 QLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 184

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++A CK      A  +  +M  KG   N+VTY+ +I+G  +   +  A +    +   
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ VSY+ ++ GLC     E+    F   ++ + +P+ VT+ +L+R +C+ G    A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304

Query: 187 MQLYDSMLRNG 197
           +Q+ + M  +G
Sbjct: 305 IQVLEQMSGHG 315



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 96/198 (48%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LDAA +L  ++  +   P+++T+N ++  +C    +DEA++L E++      PN IT+ 
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+D    +   ++A  +   ++  G   ++VTYS +I    +   ++ A  ++  + + 
Sbjct: 532 TLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P  V Y+ ++  LCKR   + A+  F   + N  +P+ +TY  LI G        E 
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKET 651

Query: 187 MQLYDSMLRNGIMPDGLL 204
             L   +   G++   LL
Sbjct: 652 RDLLRELCSRGVLNKNLL 669



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 5/208 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI    L  A +L  + T RG  PD+     +I   C   R  +A ++           +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVY 120
              +  L+  +C+ G++D A  + + M    P A +  TY+ +I G      +  A  + 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M      P++V+Y++L++ +CK     +A+            P++VTY ++I G C+ 
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           GR  +A +  + +   G  PD +  +T+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTV 256



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 68/127 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +  +C+ + AL+L   L   G+ PDI+TY++II      +R++EA+++F  +  + ++P 
Sbjct: 537 ITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 596

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  ++ A CK    D A   F+ M+  G   N +TY  LI+G      +K   D+  
Sbjct: 597 AVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLR 656

Query: 122 EMCENNI 128
           E+C   +
Sbjct: 657 ELCSRGV 663



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 38/175 (21%)

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           L EA +L ++ T     P+    T LI   C+ GR  DA  +       G          
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG---------- 108

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
                       +A DV+             +Y+ L+ G C+ G ++ A           
Sbjct: 109 ------------TAVDVF-------------AYNTLVAGYCRYGQLDAARRLIASM---P 140

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           + PD  TY  +IRG C  GR  EA+ L D ML  G  P  +  + L +   +S+G
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195



 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 43/92 (46%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L +E  ++ A+K+F  + D G+ P  + YN I+   C     D A+  F  +      P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           N +T+  LI+    E  + +   +  ++  +G
Sbjct: 631 NELTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 3/206 (1%)

Query: 6   CHLD---AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH++    A+ L  Q+   G EP+++ YNTII   C   ++D A+ +   +  + ++P+ 
Sbjct: 154 CHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDV 213

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+  LI      G+   +  + S M+  G   +V+T+S +ID + K   +  A   Y+E
Sbjct: 214 ITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDE 273

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M + ++ PNIV+Y+ LI+GLC  GL++EA    +  +     P+ VTY  L+ GYCK+ R
Sbjct: 274 MIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKR 333

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             +AM++   M  +G+  D    +TL
Sbjct: 334 VDDAMKILCVMSHDGVDGDTFTYNTL 359



 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 113/205 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  L  A K + ++  R ++P+I+TYN++I G C    LDEA ++   +      PN++
Sbjct: 260 KEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAV 319

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L++ +CK  R+DDA  +   M   G   +  TY+ L  GY ++    +A  V   M
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P+I ++++L+DGLC+ G +E+AL        +  +  ++TY I+I+G CKA + 
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A  L+ S+   G+ PD +  +T+
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTM 464



 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 106/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL +   +   G+ PD+ITYN++I       +   + ++   +  + + P+ ITF+
Sbjct: 193 QVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFS 252

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +ID F KEG++ +A   + +M+++    N+VTY+ LI+G      +  A  V   M   
Sbjct: 253 AMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN V+Y+ L++G CK   +++A+        + +  D  TY  L +GYC+AG+   A
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAA 372

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            ++   M+  G++PD    + L D
Sbjct: 373 EKVLARMVSCGVLPDIYTFNMLLD 396



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 108/194 (55%), Gaps = 1/194 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A K+   +  +G  P+ +TYNT++ GYC   R+D+A+++   ++   +  ++ T+  
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L   +C+ G+ + A  + ++M+  G   ++ T++ L+DG  +   ++ A    E++ ++ 
Sbjct: 359 LYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSE 418

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               I++Y+I+I G+CK   +E+A Y F       + PDV+TY  ++ G  +     EA 
Sbjct: 419 TVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAH 478

Query: 188 QLYDSMLR-NGIMP 200
           +LY  M + +G+MP
Sbjct: 479 ELYRKMKKDDGLMP 492



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 104/193 (53%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           +A + LF  +   G+  D+ +++T+I  +C  +RL  A+    K+  +  +P+ +TF  L
Sbjct: 90  EAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSL 149

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++ FC   R+ +A  +  +++  G + NVV Y+ +ID   +++ + +A DV   M +  I
Sbjct: 150 VNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI 209

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++++Y+ LI  L   G    +       +   + PDV+T++ +I  + K G+  EA +
Sbjct: 210 RPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKK 269

Query: 189 LYDSMLRNGIMPD 201
            YD M++  + P+
Sbjct: 270 QYDEMIQRSVDPN 282



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 101/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL LF  + +    P I+ ++ ++     L + +  + LF  +  + +  +  +F+ LID
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FC+  R+  A     KM++ G + ++VT+  L++G+     ++ A  + +++      P
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V Y+ +ID LC+   ++ AL   +      + PDV+TY  LI     +G+   + ++ 
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M+R GI PD +  S + D
Sbjct: 237 SDMMRMGIHPDVITFSAMID 256



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 82/148 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A+K+   ++  G++ D  TYNT+  GYC   + + A ++  ++    + P+  
Sbjct: 330 KSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIY 389

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF +L+D  C+ G+++ A +    + +      ++TY+ +I G  K+  ++ A+ ++  +
Sbjct: 390 TFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSL 449

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
               +SP++++Y+ ++ GL ++ L  EA
Sbjct: 450 ALKGVSPDVITYTTMMIGLRRKRLWLEA 477


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 30/239 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---- 57
           L +   + AA K+  ++  +G  PD +TY TI+   C L+RLDEA ++   +  V     
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYN 205

Query: 58  --------------------------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                                     L+PN IT+T ++DAFCK G +  A  + ++M+  
Sbjct: 206 AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVIT 265

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   NVVT++ L+ G F    +  A D++  M     +P+ VSY+ILI GLC  G ++ A
Sbjct: 266 GCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 325

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +    +   P+V TY+ LI G+ KAG    A+ +++ M R+G  P+ ++ + + D
Sbjct: 326 SSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 384



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 35/236 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +     +   +  RGL+P++ITY TI+  +C    L  A  +  ++      PN
Sbjct: 211 LCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPN 270

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG--PKA------------------------ 95
            +TFT L+     +GR+ DA  M+  M+ +G  P                          
Sbjct: 271 VVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILN 330

Query: 96  ---------NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                    NV TYS LIDG+ K+ ++  A  ++ +M  +   PN+V Y+ ++D  CK+ 
Sbjct: 331 SMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 390

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           +  +A       L  +  P+ VT+  LIR  C   R   A+ ++  M R+G +P+G
Sbjct: 391 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 446



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +   +   G  P++ TY+T+I G+     L  A+ ++  ++    KPN + +T 
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D FCK+   + A  +  KML +    N VT++ LI      + +  A  V+ EM  + 
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 441

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +Y+ LI GL + G   +AL+       + +   +VTY  ++ G C+     EAM
Sbjct: 442 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 501

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
                M+  GI P+    S +
Sbjct: 502 VFVGKMIVQGIQPNAFTFSAI 522



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL ++  +   G  P  ++YN +I G CS+  L  A  +   +      PN  T++ LID
Sbjct: 290 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 349

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F K G +  A  +++ M   G K NVV Y+ ++D + K      A  + ++M   N  P
Sbjct: 350 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 409

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+++ LI  LC    +  AL  FH    +  +P+  TY  LI G  + G   +A+ + 
Sbjct: 410 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV 469

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M  +GI    +  +T+     Q+  S+E
Sbjct: 470 TEMQSHGIELSLVTYNTVVSGLCQTRMSRE 499



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A+ ++  ++  G +P+++ Y  ++  +C     ++A  L +K+      PN++
Sbjct: 353 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 412

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI + C   R+  A  +F +M   G   N  TY+ LI G F+  N   A  +  EM
Sbjct: 413 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 472

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I  ++V+Y+ ++ GLC+  +  EA+      +   + P+  T++ +I  YCK G  
Sbjct: 473 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 532

Query: 184 TEAMQLYDSM 193
             A  +  +M
Sbjct: 533 RMAAWMLGAM 542



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 98/217 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   + A  L  ++      P+ +T+NT+I   C   R+  A+ +F ++      PN  
Sbjct: 388 KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 447

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI    +EG   DA  M ++M   G + ++VTY+ ++ G  +++  + A     +M
Sbjct: 448 TYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 507

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN  ++S +I   CK G +  A +        +   +++ Y IL+   C   + 
Sbjct: 508 IVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 567

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +AM     ML  GI P+ +  + L     ++ G  E
Sbjct: 568 VDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIE 604



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E +   AL +  ++   G+E  ++TYNT++ G C      EA+    K+    ++PN
Sbjct: 456 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 515

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF+ +I A+CKEG +  A  M   M       N++ Y+ L+        +  A     
Sbjct: 516 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 575

Query: 122 EMCENNISPNIVSYSILIDGLCKR-GLMEEALYAFHCALD 160
           +M    I PN V++++L+ G+ +  G +E + +  H  ++
Sbjct: 576 KMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 615



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 30/161 (18%)

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID------------------------- 105
           A C+  R+  A  M  +M  KG   + VTY+ ++                          
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASY 204

Query: 106 -----GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
                   +   M+  F V  +M    + PN+++Y+ ++D  CK G +  A       + 
Sbjct: 205 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI 264

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
               P+VVT+  L+RG    GR  +A+ ++  M+  G  P 
Sbjct: 265 TGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 305


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +  RG  PD+++YN +I G C   R+DEA Q+F++++   L PN+ T+  L+ 
Sbjct: 64  ARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLG 123

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F K+        +F  M  +G   ++VTYS  + G  K   +  A +++ EM  N ++P
Sbjct: 124 GFWKQ-----KIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNP 178

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V Y+ILID +CK G +E+A   F       LLPDV ++  +I G C+ G   EA + +
Sbjct: 179 DLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAF 238

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGS 218
             M R+G  PD    + +    LQ++G+
Sbjct: 239 RQMERDGCPPDCCSYNVIVRGFLQNNGA 266



 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 119/200 (59%), Gaps = 5/200 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  +   + ++G+EP+ +TY++++ GY   NR+ EA ++F  +      P+
Sbjct: 20  LCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRGCIPD 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++ ILI+  CK  R+D+A  +F +M  +G   N  TY+ L+ G++K +       +++
Sbjct: 80  VLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQK-----IQLFK 134

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M     SP++V+YSI + GL K+G +++AL  F    +N+L PD+V Y ILI   CK+G
Sbjct: 135 DMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSG 194

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  +A +L+  +   G++PD
Sbjct: 195 KLEDARELFLKLHVKGLLPD 214



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 30/188 (15%)

Query: 53  LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
           +T   + P+++TF IL+D  CK+G++ +A  +   M+EKG + N VTYS L++GY     
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF----------HCALDNH 162
           +  A  V+  M      P+++SY+ILI+G CK   ++EA   F          + A  N 
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 163 LL--------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           LL                    PD+VTY+I + G  K G   +A++L+  M  N + PD 
Sbjct: 121 LLGGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 203 LLLSTLAD 210
           ++ + L D
Sbjct: 181 VIYNILID 188



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 80/143 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+ +LD AL+LF ++ +  L PD++ YN +I   C   +L++A +LF KL    L P+
Sbjct: 155 LSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPD 214

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++T +I   C+EG +D+A   F +M   G   +  +Y+ ++ G+ ++     A  +++
Sbjct: 215 VRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQ 274

Query: 122 EMCENNISPNIVSYSILIDGLCK 144
           EM +   S + ++ ++  D L K
Sbjct: 275 EMFDRGFSADALTRTLAADLLSK 297



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 56/110 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+ A +LF +L  +GL PD+ ++ +II G C    LDEA + F ++      P+  
Sbjct: 192 KSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCC 251

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
           ++ +++  F +      A  +F +M ++G  A+ +T +   D   K  N+
Sbjct: 252 SYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDDNL 301


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A ++  Q+  + + P++++Y+T+I G+    R DEA+ LF ++  + +  + +
Sbjct: 386 KGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRV 445

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+  + K GR ++A  +  +M   G K +VVTY+ L+ GY K         V+ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM 505

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++ PN+++YS LIDG  K GL +EA+  F       L  DVV Y+ LI   CK G  
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLV 565

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+ L D M + GI P+ +  +++ D
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIID 592



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 112/203 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +AA  LF ++++R +E D+ +YNT++   C   ++D A ++  ++   ++ PN ++++ 
Sbjct: 355 WEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYST 414

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID F K GR D+A  +F +M       + V+Y+ L+  Y K    + A D+  EM    
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I  ++V+Y+ L+ G  K+G  +E    F      H+LP+++TY+ LI GY K G   EAM
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +++      G+  D +L S L D
Sbjct: 535 EVFREFKSAGLRADVVLYSALID 557



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 97/177 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D AL LFG++    +  D ++YNT++  Y  + R +EA+ +  ++  V +K + +
Sbjct: 421 KAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  + K+G+ D+   +F++M  +    N++TYS LIDGY K    K A +V+ E 
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREF 540

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
               +  ++V YS LID LCK GL+  A+          + P+VVTY  +I  + ++
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 42/241 (17%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKL--TCVQLKPNSIT 64
           + A+ +F  + + GL P+++TYN +I  CG   +    +  + F+++   CVQ  P+ IT
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME-FKQVAKFFDEMQRNCVQ--PDRIT 341

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           F  L+    + G  + A  +F +M  +  + +V +Y+ L+D   K   M  AF++  +M 
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAF------HCALD----NHLLP--------- 165
              I PN+VSYS +IDG  K G  +EAL  F      + ALD    N LL          
Sbjct: 402 AKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSE 461

Query: 166 ----------------DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
                           DVVTY  L+ GY K G+  E  +++  M R  ++P+ L  STL 
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLI 521

Query: 210 D 210
           D
Sbjct: 522 D 522



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 82/143 (57%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + AL +  ++   G++ D++TYN ++ GY    + DE  ++F ++    + PN +T++ L
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTL 520

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ID + K G   +A  +F +    G +A+VV YS LID   K+  + SA  + +EM +  I
Sbjct: 521 IDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580

Query: 129 SPNIVSYSILIDGLCKRGLMEEA 151
           SPN+V+Y+ +ID   +   ME +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMERS 603



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 3/200 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F      G    +  ++ +I  Y      +EA+ +F  +    L+PN +T+  +ID
Sbjct: 252 AKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311

Query: 71  AFCKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           A C +G M+       F +M     + + +T++ L+    +    ++A ++++EM    I
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRI 370

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             ++ SY+ L+D +CK G M+ A           ++P+VV+Y+ +I G+ KAGR  EA+ 
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+  M    I  D +  +TL
Sbjct: 431 LFGEMRYLNIALDRVSYNTL 450



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 65/115 (56%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   D   K+F ++    + P+++TY+T+I GY       EA+++F +     L+ + +
Sbjct: 491 KQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVV 550

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            ++ LIDA CK G +  A  +  +M ++G   NVVTY+ +ID + +S  M+ + D
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSAD 605



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 5/171 (2%)

Query: 44  DEAVQLFEKLTCVQLKPNSIT--FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
           D+AV  +E     + + N      + +I    + G++  A  +F      G    V  +S
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFS 272

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYA--FHCAL 159
            LI  Y +S   + A  V+  M E  + PN+V+Y+ +ID  C +G ME    A  F    
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQ 331

Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            N + PD +T+  L+    + G    A  L+D M    I  D    +TL D
Sbjct: 332 RNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLD 382



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 34/162 (20%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+++F +    GL  D++ Y+ +I   C    +  AV L +++T   + PN +T+  +ID
Sbjct: 533 AMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592

Query: 71  AFCKEGRMDDAT---------------------------MMFSKMLEKGPKANVVTYSCL 103
           AF +   M+ +                             +F ++  +G   N +T  C 
Sbjct: 593 AFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEG--NNRMTKDCK 650

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +G    Q +    +V+ +M +  I PN+V++S +++  C R
Sbjct: 651 -EGM---QELSCILEVFRKMHQLEIKPNVVTFSAILNA-CSR 687



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC--SLNRLDEAVQLFEKLTCVQLKP 60
           + E   +  ++LFGQLT  G        N  +   C   +  L   +++F K+  +++KP
Sbjct: 622 LTETEGNRVIQLFGQLTSEG--------NNRMTKDCKEGMQELSCILEVFRKMHQLEIKP 673

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKM 88
           N +TF+ +++A  +    +DA+M+  ++
Sbjct: 674 NVVTFSAILNACSRCNSFEDASMLLEEL 701


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 120/219 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             KE  +D+AL  + ++ + G+ PD+ITY ++I G C  N++  A+++   +    +K +
Sbjct: 579 FFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LID FCK   M+ A+  F+++L+ G   N V Y+ +I G+    NM++A ++++
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +N +  ++  Y+ +I GL K G +  AL  +   L   ++PD+V Y +LI G    G
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNG 758

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   A ++   M  N I P  L+ + L   N +    QE
Sbjct: 759 QLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQE 797



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF +  + G+  +++TYN ++     L +++EA  L+EK+    + P+ +++  
Sbjct: 411 LEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNN 469

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   CK+G MD A  M   +LE+G K N VTY+ LIDG+FK  + + AF V+E+M   N
Sbjct: 470 LILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN 529

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P   +++ +I+GL K G + E     +  +    +   +TY  +I G+ K G    A+
Sbjct: 530 IAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSAL 589

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
             Y  M  +GI PD +  ++L D
Sbjct: 590 LAYREMCESGISPDVITYTSLID 612



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 122/236 (51%), Gaps = 35/236 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  L+ ++  +G+ P +++YN +I G+C    +D+A  + + +    LKPN++T+T+
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 68  LIDAFCKEGRMDDATMMFSKML-----------------------------------EKG 92
           LID F K+G  + A ++F +M+                                   ++G
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
             +  +TY+ +IDG+FK   + SA   Y EMCE+ ISP++++Y+ LIDGLCK   +  AL
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                     +  DVV Y+ LI G+CK      A + +  +L  G+ P+ ++ +++
Sbjct: 625 EMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSM 680



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 1/202 (0%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G     ITYN+II G+     +D A+  + ++    + P+ IT+T LID  CK  ++  
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGL 622

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A  M S M  KG K +VV YS LIDG+ K  +M+SA   + E+ +  ++PN V Y+ +I 
Sbjct: 623 ALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMIS 682

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G      ME AL      + N +  D+  Y  +I G  K G+ + A+ LY  ML   I+P
Sbjct: 683 GFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVP 742

Query: 201 DGLLLSTLADYNLQSSGSQEHC 222
           D ++ + L +  L ++G  E+ 
Sbjct: 743 DIVMYTVLIN-GLSNNGQLENA 763



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 102/173 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +++A K F +L D GL P+ + YN++I G+  LN ++ A+ L +++   ++  +   +T 
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I    KEG++  A  ++S+ML K    ++V Y+ LI+G   +  +++A  + +EM  NN
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           I+P+++ Y+ILI G  + G ++EA       LD  L+PD  TY IL+ G  K 
Sbjct: 775 ITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 122/218 (55%), Gaps = 1/218 (0%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+ +   AL+L  ++   GL  ++I   +++ GYC L  ++ A+QLF+++    + P+ 
Sbjct: 301 VKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDV 360

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + F++LI+   K G M+ A  ++++M   G + NV   + L++G+ +   ++ A+ +++E
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E+ I+ N+V+Y+IL+  L + G + EA   +   +   + P +V+Y  LI G+CK G 
Sbjct: 421 AVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGC 479

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             +A  +  S+L  G+ P+ +  + L D   +   S+ 
Sbjct: 480 MDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER 517



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 40/244 (16%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +KE   +   K F +   RGLE D   Y+ ++   C    L+ A +L +++      P+ 
Sbjct: 231 MKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSK 290

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+T +I A  K+G   +A  +  +M+  G   NV+    L+ GY    ++  A  +++E
Sbjct: 291 GTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDE 350

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEA----------------------LYAFH---- 156
           + E  + P++V +S+LI+G  K G ME+A                      L  FH    
Sbjct: 351 VVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNL 410

Query: 157 -----CALD---NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                   D    H + +VVTY IL++   + G+  EA  L++ M+  GI P      +L
Sbjct: 411 LEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITP------SL 464

Query: 209 ADYN 212
             YN
Sbjct: 465 VSYN 468



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 100/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L+ ++ +RG+  D  T + ++       + +E  + F++     L+ ++  ++IL+ 
Sbjct: 204 ARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQ 263

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C+   ++ A  +  +M E G   +  TY+ +I    K  N   A  + +EM    +  
Sbjct: 264 AVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPM 323

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N++    L+ G C  G +  AL  F   ++  ++PDVV +++LI G  K G   +A +LY
Sbjct: 324 NVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELY 383

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M   GI P+  ++++L +
Sbjct: 384 TRMKLMGIQPNVFIVNSLLE 403



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 98/200 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A++ F  + +  L P +   N ++      N + +A QL++++    +  +  T  +++ 
Sbjct: 169 AVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMR 228

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  KEG+ ++    F +   +G + +   YS L+    +  ++  A ++ +EM E    P
Sbjct: 229 ACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVP 288

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ +I    K+G   EAL      +   L  +V+    L++GYC  G    A+QL+
Sbjct: 289 SKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLF 348

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D ++  G++PD ++ S L +
Sbjct: 349 DEVVEGGVVPDVVIFSVLIN 368



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
            + +S  F  L+ +F +  ++ DA   F  MLE      V   + L+    +   +  A 
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDAR 205

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            +Y+EM E  I  +  +  +++    K G  EE    F  A    L  D   Y+IL++  
Sbjct: 206 QLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265

Query: 178 CKAGRPTEAMQLYDSMLRNGIMP 200
           C+      A +L   M   G +P
Sbjct: 266 CRRLDLNLACELLKEMREFGWVP 288


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 30/239 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---- 57
           L +   + AA K+  ++  +G  PD +TY TI+   C L+RLDEA ++   +  V     
Sbjct: 169 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYN 228

Query: 58  --------------------------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                                     L+PN IT+T ++DAFCK G +  A  + ++M+  
Sbjct: 229 AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVIT 288

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   NVVT++ L+ G F    +  A D++  M     +P+ VSY+ILI GLC  G ++ A
Sbjct: 289 GCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 348

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +    +   P+V TY+ LI G+ KAG    A+ +++ M R+G  P+ ++ + + D
Sbjct: 349 SSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 407



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 35/236 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +     +   +  RGL+P++ITY TI+  +C    L  A  +  ++      PN
Sbjct: 234 LCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPN 293

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG--PKA------------------------ 95
            +TFT L+     +GR+ DA  M+  M+ +G  P                          
Sbjct: 294 VVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILN 353

Query: 96  ---------NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                    NV TYS LIDG+ K+ ++  A  ++ +M  +   PN+V Y+ ++D  CK+ 
Sbjct: 354 SMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 413

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           +  +A       L  +  P+ VT+  LIR  C   R   A+ ++  M R+G +P+G
Sbjct: 414 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 469



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +   +   G  P++ TY+T+I G+     L  A+ ++  ++    KPN + +T 
Sbjct: 345 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 404

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D FCK+   + A  +  KML +    N VT++ LI      + +  A  V+ EM  + 
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 464

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +Y+ LI GL + G   +AL+       + +   +VTY  ++ G C+     EAM
Sbjct: 465 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 524

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
                M+  GI P+    S +
Sbjct: 525 VFVGKMIVQGIQPNAFTFSAI 545



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 102/219 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +  +  AL ++  +   G  P  ++YN +I G CS+  L  A  +   +      PN
Sbjct: 304 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 363

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID F K G +  A  +++ M   G K NVV Y+ ++D + K      A  + +
Sbjct: 364 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 423

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   N  PN V+++ LI  LC    +  AL  FH    +  +P+  TY  LI G  + G
Sbjct: 424 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 483

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              +A+ +   M  +GI    +  +T+     Q+  S+E
Sbjct: 484 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 522



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A+ ++  ++  G +P+++ Y  ++  +C     ++A  L +K+      PN++
Sbjct: 376 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 435

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI + C   R+  A  +F +M   G   N  TY+ LI G F+  N   A  +  EM
Sbjct: 436 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 495

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I  ++V+Y+ ++ GLC+  +  EA+      +   + P+  T++ +I  YCK G  
Sbjct: 496 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 555

Query: 184 TEAMQLYDSM 193
             A  +  +M
Sbjct: 556 RMAAWMLGAM 565



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 98/217 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   + A  L  ++      P+ +T+NT+I   C   R+  A+ +F ++      PN  
Sbjct: 411 KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 470

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI    +EG   DA  M ++M   G + ++VTY+ ++ G  +++  + A     +M
Sbjct: 471 TYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 530

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN  ++S +I   CK G +  A +        +   +++ Y IL+   C   + 
Sbjct: 531 IVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 590

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +AM     ML  GI P+ +  + L     ++ G  E
Sbjct: 591 VDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIE 627



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E +   AL +  ++   G+E  ++TYNT++ G C      EA+    K+    ++PN
Sbjct: 479 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 538

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF+ +I A+CKEG +  A  M   M       N++ Y+ L+        +  A     
Sbjct: 539 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 598

Query: 122 EMCENNISPNIVSYSILIDGLCKR-GLMEEALYAFHCALD 160
           +M    I PN V++++L+ G+ +  G +E + +  H  ++
Sbjct: 599 KMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 638



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 30/194 (15%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C  N +   V +++ +    + PN  T+ +L+ A C+  R+  A  M  +M  KG   + 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 98  VTYSCLID------------------------------GYFKSQNMKSAFDVYEEMCENN 127
           VTY+ ++                                  +   M+  F V  +M    
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+++Y+ ++D  CK G +  A       +     P+VVT+  L+RG    GR  +A+
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 188 QLYDSMLRNGIMPD 201
            ++  M+  G  P 
Sbjct: 315 DMWRWMVAEGWAPS 328



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C E  +    +++  M + G   NV TY+ L+    ++  + +A  + +EM      P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+Y+ ++  LCK   ++EA           + P   +Y  ++   C+  R  E   +   
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAA-----MPPVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M+  G+ P+ +  +T+ D
Sbjct: 250 MVGRGLQPNVITYTTIVD 267



 Score = 43.1 bits (100), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 110 SQNMKSAFD-VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            +NM  A   VY+ M ++ + PN+ +Y++L+  LC+   +  A             PD V
Sbjct: 136 GENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDV 195

Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           TYA ++   CK  R  EA ++  +M       + ++L+   ++ +Q
Sbjct: 196 TYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQ 241


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 111/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +  Q+ D  + P+  TYN++I GY S  +  EAV++ ++++    +PN +T+++
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G   +A  +F+ M++ G K N  TY  L+ GY    N+    +V + M +N 
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P    ++I I   CK G ++EA   F+       +PD+V Y  +I G CK GR  +AM
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             +  M+ +G+ PD +  +TL
Sbjct: 483 SRFCQMIDDGLSPDIITFNTL 503



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 101/193 (52%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +   G+ P    +N  I  YC   RLDEA   F K+      P+ + +T +ID  CK GR
Sbjct: 418 MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGR 477

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +DDA   F +M++ G   +++T++ LI G+      + A +++ EM +  I PN+ +++ 
Sbjct: 478 LDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNS 537

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +ID L K G + EA   F         P+VV+Y  +I GY  AG   E M+L D ML  G
Sbjct: 538 MIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 597

Query: 198 IMPDGLLLSTLAD 210
           + P  +  +TL D
Sbjct: 598 LKPTAVTFNTLLD 610



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITFT 66
           L+      GQ+   GL    +T+  ++   C+  R  +A+ +   ++  +   P+  ++T
Sbjct: 160 LNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYT 219

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            L+   C E + ++A  +   M E G     NVV+Y+ +I G+FK  ++  A+ ++ +M 
Sbjct: 220 TLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKML 279

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I PN+V+ + +IDGLCK   M++A       +D H++P+  TY  LI GY  +G+ T
Sbjct: 280 DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWT 339

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA+++   M R+G  P+ +  S L D
Sbjct: 340 EAVRILKEMSRDGQRPNVVTYSMLID 365



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 93/176 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P++++Y T+I G+     + +A  LF K+    + PN +T   +ID  CK   MD A  +
Sbjct: 250 PNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 309

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+++    N  TY+ LI GY  S     A  + +EM  +   PN+V+YS+LID LCK
Sbjct: 310 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCK 369

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            GL  EA   F+  + +   P+  TY  L+ GY   G   +   + D M++NG+ P
Sbjct: 370 SGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRP 425



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 111/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +   G +P+  TY +++ GY +   L +   + + +    ++P    F I I 
Sbjct: 376 AREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIY 435

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK GR+D+A++ F+KM ++G   ++V Y+ +IDG  K   +  A   + +M ++ +SP
Sbjct: 436 AYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 495

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +I++++ LI G    G  E+A   F+  +D  + P+V T+  +I    K G+ TEA +L+
Sbjct: 496 DIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLF 555

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M R G  P+ +  +T+
Sbjct: 556 DLMPRAGAKPNVVSYNTM 573



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 16/193 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+  F Q+ D GL PDIIT+NT+I G+    + ++A +LF ++    + PN
Sbjct: 472 LCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPN 531

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  +ID   KEG++ +A  +F  M   G K NVV+Y+ +I GYF +  +     + +
Sbjct: 532 VNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 591

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P  V+++ L+DG+   GL                 PDVVT   LI   C+ G
Sbjct: 592 DMLLIGLKPTAVTFNTLLDGMVSMGLK----------------PDVVTCKTLIDSCCEDG 635

Query: 182 RPTEAMQLYDSML 194
           R  + + L+  ML
Sbjct: 636 RIEDILTLFREML 648



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 19/124 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A KLF  +   G +P++++YNT+I GY     + E ++L + +  + LKP 
Sbjct: 542 LFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 601

Query: 62  SITFTIL-------------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           ++TF  L                   ID+ C++GR++D   +F +ML K  K + +T + 
Sbjct: 602 AVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 661

Query: 103 LIDG 106
            + G
Sbjct: 662 KLRG 665


>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 755

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++ + GL PD   Y T+I GYC+L R D+A Q F  L      P+ IT+T+LI 
Sbjct: 459 ASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIG 518

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  K G + DA  +F  M  +G   +VVTY+ L+ GY K+  +   F++ +EM    ISP
Sbjct: 519 ACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISP 578

Query: 131 NIVSYSILID-----------------------------------GLCKRGLMEEALYAF 155
           ++ +Y+ILI                                    GL KRG  +EA   +
Sbjct: 579 DVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILW 638

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               D  + PDVVT + L+ GYC+A R  +A+ L+D +L  G+ PD +L +TL
Sbjct: 639 FYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTL 691



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 108/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +   GL PD++TYN ++ GY   ++L++  +L +++    + P+  T+ ILI 
Sbjct: 529 AESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 588

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           +    G +D+A  + S+++ +G   + + ++ +I G  K  + + AF ++  M +  + P
Sbjct: 589 SMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKP 648

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+ S L+ G C+   ME+A+  F   LD  L PDVV Y  LI GYC  G   +A +L 
Sbjct: 649 DVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 708

Query: 191 DSMLRNGIMPD 201
             M++ G++P+
Sbjct: 709 GLMVQRGMLPN 719



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 9/212 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +  +L   G+  D ++ +++I G+C + + +EA++L       +L+PN
Sbjct: 383 LCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPN 439

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++  +   C  G M  A+ +F ++ E G   +   Y+ +IDGY        AF  + 
Sbjct: 440 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFG 499

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++   P++++Y++LI    K G + +A   F       L PDVVTY  L+ GY K  
Sbjct: 500 ALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTH 559

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           +  +  +L D M   GI PD      +A YN+
Sbjct: 560 QLNKVFELIDEMRSAGISPD------VATYNI 585



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 90/173 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+   +L  ++   G+ PD+ TYN +I        +DEA ++  +L      P+++
Sbjct: 557 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSAL 616

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            FT +I    K G   +A +++  M +   K +VVT S L+ GY ++Q M+ A  +++++
Sbjct: 617 AFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKL 676

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +  + P++V Y+ LI G C  G +E+A       +   +LP+  T+  L+ G
Sbjct: 677 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVG 729



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 80/153 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++   ++D A ++  +L  RG  P  + +  +I G        EA  L+  +  +++KP+
Sbjct: 590 MVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPD 649

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + L+  +C+  RM+ A ++F K+L+ G K +VV Y+ LI GY    +++ A ++  
Sbjct: 650 VVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 709

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYA 154
            M +  + PN  ++  L+ GL  +  M    +A
Sbjct: 710 LMVQRGMLPNESTHHALVVGLEGKRFMNSEEHA 742



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE  +D ALKL  ++   G+ P      +++      + L+ A +  E +       N+
Sbjct: 279 IKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHMLSRGRHLNA 338

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
              ++ I  +C +G  D    +   M + G + ++V ++  ID   K+  ++ A  V  +
Sbjct: 339 ALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFK 398

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +    IS + VS S +IDG CK G  EEA+   H      L P++  Y+  +   C  G 
Sbjct: 399 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGD 455

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  ++  +   G++PD    +T+ D
Sbjct: 456 MLRASTIFQEIFELGLLPDCYCYTTMID 483


>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 599

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K C    AL++  +L+  G +PD++TYN +I   C   RL++A  +  +L    L+P
Sbjct: 286 LVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEP 345

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+ IL+ A C   R D+   +   M +     +V TY+  I+ + K  ++  A DV 
Sbjct: 346 NGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVL 405

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M  NN SP+IV+ + L++ + K+G++EEAL    C  +N     ++TY  LI    K 
Sbjct: 406 ERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKK 465

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +AM L+D ML +GI PD +   +L
Sbjct: 466 AEVKKAMVLFDEMLSDGISPDDITYGSL 493



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A  +   +   G  PD I+ N +I   C   +L  A+Q+ E +      P+
Sbjct: 182 LVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPS 241

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LI     +   D A   + + L  G     +T + L+D   K+   + A +V +
Sbjct: 242 GITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLD 301

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+      P++V+Y+ LI   CK G + +A +         L P+  TY IL+   C   
Sbjct: 302 ELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMR 361

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  E   L + M +    PD
Sbjct: 362 RWDEVCDLLEDMNQVNRDPD 381



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 88/195 (45%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HLD A+ +  ++      PDI+T NT++        ++EA+ +   +     K   IT+ 
Sbjct: 397 HLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYN 456

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA  K+  +  A ++F +ML  G   + +TY  L+ G+ K      A D+  +M   
Sbjct: 457 TLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTL 516

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
                  ++ ++I  LC+ G +E A       L  + +P     + ++    K+G   EA
Sbjct: 517 GFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEA 576

Query: 187 MQLYDSMLRNGIMPD 201
             L+  ++   I+ +
Sbjct: 577 QMLHQKLVECEILKE 591



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 6/201 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+ C +   + L GQ+      P+      II G     + ++A  + E +      P+
Sbjct: 153 LIQACCVIDEMVLHGQI------PETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPD 206

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I+  +LI   C+ G++  A  +   M   G   + +T++ LI   F  +    A   ++
Sbjct: 207 TISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWK 266

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E       P  ++ ++L+D +CK    ++AL            PDVVTY  LI   CKAG
Sbjct: 267 EQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAG 326

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           R  +A  +   +   G+ P+G
Sbjct: 327 RLNDAKFILTRLAAEGLEPNG 347



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 66/127 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+ LF ++   G+ PD ITY +++ G+C  +  DEA+ L  ++  +  +  
Sbjct: 462 LAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVK 521

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF ++I A C++G+++ A  +   ML K         S ++    KS   K A  +++
Sbjct: 522 TTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQ 581

Query: 122 EMCENNI 128
           ++ E  I
Sbjct: 582 KLVECEI 588



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 74/148 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ AL +   + + G +  +ITYNT+I        + +A+ LF+++    + P+ I
Sbjct: 429 KKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDI 488

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  FCK+   D+A  + ++ML  G +    T+  +I    +   +++A ++ + M
Sbjct: 489 TYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVM 548

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
              N  P     S ++  + K G  +EA
Sbjct: 549 LSKNSIPGNSLCSSIVTKVAKSGWNKEA 576



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 75/165 (45%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           YC+  +L +A  + +++      P +     +I    K G+ + A  +   M+  G   +
Sbjct: 147 YCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPD 206

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            ++ + LI    +   + SA  V E+M  +  SP+ ++++ LI  +  + + + A+  + 
Sbjct: 207 TISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWK 266

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L     P  +T  +L+   CK   P +A+++ D +   G  PD
Sbjct: 267 EQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPD 311



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 60/149 (40%)

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +C  G++  A  +  +M+  G          +I G  K+     A  V E M  +   P+
Sbjct: 147 YCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPD 206

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            +S ++LI  LC+ G +  AL        +   P  +T+  LIR          A+  + 
Sbjct: 207 TISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWK 266

Query: 192 SMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             LR G  P  +  + L D   ++ G Q+
Sbjct: 267 EQLRLGWPPYEMTSTLLVDLVCKNCGPQK 295


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 107/188 (56%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P+++TY  ++ G C  +++ +A  L E +     +PN+I +  LID FCK  ++D+A  
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F KM+E+G   NV TYS LID  FK + +     V  +M EN+ +PNIV Y+ +IDGL 
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K    +EA        +    P+VVTY  +I G+ KAG+  + ++L+  M   G  P+ +
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 204 LLSTLADY 211
             + L ++
Sbjct: 822 TYTVLINH 829



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A K+  ++   G  PD  TY+ +I   C+ +R++ A  LF+++    + P+  T+TI
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F K G +  A     +M+  G +  VVTY+ LI  Y K++ +  A +++E M    
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA------------FHCALDNHLL--PDVVTYA 171
             PN+++Y+ LIDG CK G +E+A  +YA             +  + N++   P+VVTY 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +  +A  L ++M  +G  P+ ++   L D
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 21/225 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +IK+ H         ++   G EP ++TY T+I  Y    ++  A +LFE +      PN
Sbjct: 539 IIKQAH-----NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPN 593

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML----------------EKGPKANVVTYSCLID 105
            IT+T LID +CK G ++ A  ++++M                     K NVVTY  L+D
Sbjct: 594 VITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVD 653

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           G  K+  +K A D+ E M  +   PN + Y  LIDG CK   ++EA   FH  ++    P
Sbjct: 654 GLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNP 713

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +V TY+ LI    K  R    +++   ML N   P+ ++ + + D
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMID 758



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 16/220 (7%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  LF ++   G+ PD+ TY  +I  +     + +A    +++     +P  +T+T
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM--- 123
            LI A+ K  ++  A  +F  M+ KG   NV+TY+ LIDGY KS N++ A  +Y  M   
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 124 -----------CENNIS--PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
                       +NN++  PN+V+Y  L+DGLCK   +++A         +   P+ + Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             LI G+CKA +  EA +++  M+  G  P+    S+L D
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 89/172 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EP+ I Y+ +I G+C   +LDEA ++F K+      PN  T++ LID   K+ R+D  
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + SKMLE     N+V Y+ +IDG  K      A+ +   M E    PN+V+Y+ +IDG
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
             K G +++ L  F         P+ VTY +LI   C  G   EA  L + M
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 5/218 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A ++F ++ +RG  P++ TY+++I       RLD  +++  K+      PN +
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +ID   K  + D+A  +   M EKG K NVVTY+ +IDG+ K+  +    +++ EM
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD-VVTYAILIRGYCKAGR 182
                +PN V+Y++LI+  C  G ++EA YA    +     P  V +Y  +I GY +   
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEA-YALLEEMKQTYWPKHVSSYCKVIEGYKR--E 868

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              ++ L + + +NG  P  LL   L D N   +G  E
Sbjct: 869 FILSLGLLEEVEKNGSAPTILLYKVLID-NFVKAGRLE 905



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 12/198 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD  LK+  ++ +    P+I+ Y  +I G   + + DEA +L   +     KPN
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID F K G++D    +F +M  KG   N VTY+ LI+    + ++  A+ + E
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----GLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM +     ++ SY  +I+G  +      GL+EE          N   P ++ Y +LI  
Sbjct: 845 EMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEE-------VEKNGSAPTILLYKVLIDN 897

Query: 177 YCKAGRPTEAMQLYDSML 194
           + KAGR   A++L+  ++
Sbjct: 898 FVKAGRLEVALELHKEVI 915



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 39/229 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A KL   + ++G +P+++TY  +I G+    ++D+ ++LF ++      PN
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LI+  C  G +D+A  +  +M +     +V +Y  +I+GY   +    +  + E
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLE 877

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL------------------------YAFHC 157
           E+ +N  +P I+ Y +LID   K G +E AL                        Y+F  
Sbjct: 878 EVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSY 937

Query: 158 A-------------LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           A             + + ++PD+ T+  L+ G  +  R  EA+QL DS+
Sbjct: 938 ASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           +++++   +CG+    + ++A ++  ++      P++ T++ +I   C   R+++A  +F
Sbjct: 456 NVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M   G   +V TY+ LID + K+  +K A +  +EM  +   P +V+Y+ LI    K 
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +  A   F   +     P+V+TY  LI GYCK+G   +A Q+Y  M  +  +PD
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 41/251 (16%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++   +   G  P    +N+++  YC  +    A +L +K+   + KP  + + ILI + 
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 73  CKEGRMDD------ATMMFSKMLEKGP---KANVVTYSCLIDGYFK-------------- 109
           C  G +        A   +++ML  G    K NVV+++  + G+ K              
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 110 ------------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                             +  +++AF +++EM    + P++ +Y+ILID   K G++++A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
                  + +   P VVTY  LI  Y KA + + A +L++ M+  G  P+ +  + L D 
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 212 NLQSSGSQEHC 222
             +S   ++ C
Sbjct: 604 YCKSGNIEKAC 614



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ I YN +I G C  +  +EA+    ++      PN  T+ IL+     + ++     +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S M+ +G   +   ++ L+  Y KS +   A+ + ++M +    P  V Y+ILI  +C 
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425

Query: 145 RGLM-----------------------------------------EEALYAFHCALDNHL 163
            G +                                         E+A    H  + N  
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +PD  TY+ +I   C A R   A  L+  M   G++PD    + L D
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 7/197 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LI++C      + AL+  G+L D G +P  +TYN ++  +   ++LD A  +  +++ +
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L  +  T      A CK G+  +A  +  K   +    N + Y+ +I G  ++   + A
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEA 327

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D    M   +  PN+ +Y IL+ G   +  +          +     P    +  L+  
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 177 YCKAGRPTEAMQLYDSM 193
           YCK+   + A +L   M
Sbjct: 388 YCKSDDFSYAYKLLKKM 404


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 3/212 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D A + F     R + PD+ T+N +I G C   +L +A  + + +    L P+
Sbjct: 160 LVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPS 219

Query: 62  SITFTILIDAFCKEGR---MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            +T+  +ID +CK GR   M     +  +M+E G   N VT++ L++GY K  N  +A  
Sbjct: 220 VVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVR 279

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+EEM +  I+ ++V+YS L+ GLC  G +EE +       D  L+P++ T   ++ G+C
Sbjct: 280 VFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFC 339

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           K G  T+A    DSM +  + P+ +  + L D
Sbjct: 340 KKGMMTDAEGWIDSMEQKNVKPNVVTYTILVD 371



 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +  AA+++F ++  +G+   ++TY+ ++ G CS  +++E V+L +++  + L PN  
Sbjct: 270 KDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLA 329

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   +++ FCK+G M DA      M +K  K NVVTY+ L+DGY +   MK A  V E M
Sbjct: 330 TLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAM 389

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + PN   Y+ LI G  + G                +  D+VTY +LI   C  G  
Sbjct: 390 SGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEV 449

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            +A++L D ML  G+ P  L  +T+
Sbjct: 450 RKAVKLLDEMLMVGLEPVHLTYNTI 474



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++  +KL  ++ D GL P++ T N+++ G+C    + +A    + +    +KPN
Sbjct: 303 LCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPN 362

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+TIL+D + +  +M DA  +   M  KG + N   Y+CLI G+ ++ + +S   + +
Sbjct: 363 VVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +  +IV+Y++LI  LC +G + +A+      L   L P  +TY  +I GYC+ G
Sbjct: 423 EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482

Query: 182 RPTEAMQLYDSM 193
               A ++   M
Sbjct: 483 NIKSAYEIRTRM 494



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 3/195 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+DA LK   ++ + G+ P+ +T+N ++ GYC  +    AV++FE++    +  + +T++
Sbjct: 241 HVDALLK---EMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYS 297

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   C EG++++   +  +M + G   N+ T + +++G+ K   M  A    + M + 
Sbjct: 298 ALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQK 357

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ PN+V+Y+IL+DG  +   M++AL          + P+   Y  LI G+ + G     
Sbjct: 358 NVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSV 417

Query: 187 MQLYDSMLRNGIMPD 201
             L D M   G+  D
Sbjct: 418 SGLLDEMRMKGVRAD 432



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 3/181 (1%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P   + N ++    +  R+D A + F+     ++ P+  TF I+I   CK G++  A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV---YEEMCENNISPNIVSYSILID 140
           +   +   G   +VVTY+ +IDGY K       + V    +EM E  ISPN V++++L++
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK      A+  F       +   VVTY+ L+ G C  G+  E ++L D M   G++P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 201 D 201
           +
Sbjct: 327 N 327



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 90/171 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +   ++ +G+ P+   YN +I G+           L +++    ++ + +T+ +LI 
Sbjct: 382 ALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIG 441

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C +G +  A  +  +ML  G +   +TY+ +I+GY +  N+KSA+++   M +     
Sbjct: 442 ALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRA 501

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           N+V+Y++ I  LC+ G MEE     +  L+  L+P+ VTY  +  G  + G
Sbjct: 502 NVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 10/171 (5%)

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
           +P++ +   L+ A     R+D A   F   L +    ++ T++ +I G  K+  ++ A D
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC------ALDNHLLPDVVTYAI 172
           V +++    ++P++V+Y+ +IDG CKRG    A   +H        ++  + P+ VT+ +
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRG---RAGRMYHVDALLKEMVEAGISPNEVTFNV 263

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           L+ GYCK      A+++++ M + GI    +  S L  + L S G  E  +
Sbjct: 264 LVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALV-WGLCSEGKVEEGV 313


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 1/220 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +   A++ F  +  R LEPD ITY T+I    S    D  + L++++    L+    
Sbjct: 272 KAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++++I   CK+GR  + + +F  M +KG KANV  Y+ LID Y K+ N+  A +++E M
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+ V+Y ++++GLCK G ++EA+  F    DN +  + + Y+ LI G  KAGR 
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRV 451

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            EA + ++ M+  G   D    + L D  L  SG  E  +
Sbjct: 452 DEAEKFFEEMVERGCPQDSYCYNALID-ALAKSGKMEEAL 490



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 107/198 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A+ LF ++   G EPD +TY  I+ G C   RLDEAV+ FE     ++  N++
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAM 436

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID   K GR+D+A   F +M+E+G   +   Y+ LID   KS  M+ A  +++ M
Sbjct: 437 FYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRM 496

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +      + +Y+ILI GL K    EEAL  +   +D  + P   ++  L  G C +G+ 
Sbjct: 497 EKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKV 556

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A ++ D +   G++P+
Sbjct: 557 ARACKILDELAPMGVIPE 574



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 101/193 (52%)

Query: 5   ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           E + D+ L L+ ++ +RGLE     Y+ +I G C   R  E   +FE +     K N   
Sbjct: 308 EGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAI 367

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T LIDA+ K G +++A  +F +M  +G + + VTY  +++G  KS  +  A + +E   
Sbjct: 368 YTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCK 427

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +N ++ N + YS LIDGL K G ++EA   F   ++     D   Y  LI    K+G+  
Sbjct: 428 DNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKME 487

Query: 185 EAMQLYDSMLRNG 197
           EA+ L+  M + G
Sbjct: 488 EALVLFKRMEKEG 500



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 99/203 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++  L ++ ++ + G+EP + T+N ++ G  +   ++ A ++FE + C ++ P+ +++  
Sbjct: 206 VEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNT 265

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +CK G    A   F+ M ++  + + +TY  LI   +   N  S   +Y+EM E  
Sbjct: 266 MIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERG 325

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     +YS++I GLCK G   E    F          +V  Y  LI  Y K G   EA+
Sbjct: 326 LEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAI 385

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L++ M   G  PD +    + +
Sbjct: 386 NLFERMKGEGFEPDDVTYGVIVN 408



 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%)

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LID        D    +F +  EKG    V   + LI  +     ++    V+  M 
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           E+ I P++ +++ L++GL     +E A   F       + PDVV+Y  +I+GYCKAG   
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
           +AM+ +  M +  + PD +   TL
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTL 301



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 7/156 (4%)

Query: 50  FEKLTCV--QLKPNSITFTI-----LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           F+++ C+  + K      T+     LI +F   G +++   ++ +M E G + ++ T++ 
Sbjct: 171 FDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNF 230

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           L++G   S  ++SA  V+E M    I P++VSY+ +I G CK G  ++A+  F      +
Sbjct: 231 LLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRN 290

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           L PD +TY  LI+     G     + LY  M   G+
Sbjct: 291 LEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGL 326


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 109/195 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A++    + ++GL P II +N++I  Y      D+A + ++ +    L P+  T +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+      GR+ +AT +  +M+EKG   N + ++ L+D +FK  ++  A  ++ EM   
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++V++S  IDGL K+GL+EEA   F   L   L+P+   Y  LI G+CK G+  EA
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 187 MQLYDSMLRNGIMPD 201
           ++L   M   G++PD
Sbjct: 426 LKLEKVMRHRGLLPD 440



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 105/198 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K   +  A  L+G++  RG+ PD++ ++  I G      ++EA  +F ++    L PN
Sbjct: 346 FFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 405

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  LI  FCK G++++A  +   M  +G   ++ T + +I G  K   M+SA +V+ 
Sbjct: 406 NFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM 465

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  +SP+I++Y+ LI+G CK   M  A    +    +   PD+ TY I I G+C + 
Sbjct: 466 DMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSR 525

Query: 182 RPTEAMQLYDSMLRNGIM 199
           R   A+ + D ++  GI+
Sbjct: 526 RMNRAVLMLDELVSAGIL 543



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F  + +RG  P ++T+NT+I  +C    + EA +LF+ L  +   PN+I +  L++
Sbjct: 110 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 169

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K   +D A M++ +M +KG   + +T++ L+ G++K    +    + +++    + P
Sbjct: 170 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP 229

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +   + I + GLC  G ++EA+      L+  L P ++ +  +I  Y +AG   +A + Y
Sbjct: 230 DRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY 289

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  G+ P     S+L
Sbjct: 290 KLMVHFGLTPSPSTCSSL 307



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A +L GQ+ ++GL  + + +  ++  +     +  A  L+ ++    + P+ + F+
Sbjct: 316 RLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFS 375

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             ID   K+G +++A  +F +ML KG   N   Y+ LI G+ K   +  A  + + M   
Sbjct: 376 AFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHR 435

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+I + +++I GLCK+G M  A+  F       L PD++TY  LI GYCKA     A
Sbjct: 436 GLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNA 495

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             L + M  +G  PD      L  YN++  G
Sbjct: 496 DNLVNRMYASGSNPD------LTTYNIRIHG 520



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 102/201 (50%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L++        KLF  +  RG +P   T++ II G+C    +     L   +     +P
Sbjct: 30  LLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEP 89

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+  + I+I+A C  GR  DA   F+ M+E+G    VVT++ +I+ + K  N+  A  ++
Sbjct: 90  NAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLF 149

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + + E   SPN + Y+ L++G  K   +++A   +       + PD +T+ IL+ G+ K 
Sbjct: 150 DGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKY 209

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR  +  +L   +   G++PD
Sbjct: 210 GREEDGDRLLKDISVLGLLPD 230



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +D A  L+ ++  +G+ PD IT+N ++ G+    R ++  +L + ++ + L P+ 
Sbjct: 172 VKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR 231

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             F I +   C  GR+D+A      MLEKG   +++ ++ +I  Y ++     AF+ Y+ 
Sbjct: 232 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKL 291

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ++P+  + S L+ GL   G ++EA       ++  L  + + + +L+  + K G 
Sbjct: 292 MVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGD 351

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L+  M R GI PD +  S   D
Sbjct: 352 VVGAQSLWGEMERRGIFPDVVAFSAFID 379



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 85/166 (51%)

Query: 45  EAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
           +A+++  ++  V ++P++    IL     + G   +   +F  ++ +GP+    T+S +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 105 DGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
            G+ +   +     +   M + +  PN  +Y+I+I+  C RG   +AL  F+  ++    
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           P VVT+  +I  +CK G   EA +L+D +   G  P+ ++ +TL +
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 169



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ ALKL   +  RGL PDI T N II G C   R+  A+ +F  +    L P+ IT+  
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ +CK   M +A  + ++M   G   ++ TY+  I G+  S+ M  A  + +E+    
Sbjct: 482 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL---- 537

Query: 128 ISPNIVSYSI 137
           +S  I+S+S 
Sbjct: 538 VSAGILSFSF 547


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 7/205 (3%)

Query: 13  KLFGQLTD-------RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
           K +G+++D       R   PDI TY  ++ G C   +  E  ++F+ L      P+ + +
Sbjct: 311 KAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMY 370

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T +I   C+   + DA  ++ +M++KG   N  TY+ +I GYFK  N++ A+ +Y EMC+
Sbjct: 371 TTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCD 430

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
                  VSY+++I GLC  G ++EA   F       +L + +TY  L+RG+CK G+  E
Sbjct: 431 KGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVE 490

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
              L   +L  GI P     + L D
Sbjct: 491 GANLLYELLDQGIQPSAASYAPLID 515



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 96/190 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
             ++F  L DRG  PD + Y T+I G C +  L +A +L+ ++      PN  T+  +I 
Sbjct: 351 GFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIH 410

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G +++A  M+ +M +KG     V+Y+ +I G      +K A D++EEM    I  
Sbjct: 411 GYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILR 470

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y+ L+ G CK G + E     +  LD  + P   +YA LI   C+ G    A  L+
Sbjct: 471 NHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILW 530

Query: 191 DSMLRNGIMP 200
           D M   G+ P
Sbjct: 531 DDMQNRGMEP 540



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 103/193 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A KL+ ++  +G  P+  TYN +I GY  +  L+EA +++ ++        ++++ +
Sbjct: 383 LGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNV 442

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   C  G++ +A  +F +M  KG   N +TY+ L+ G+ K   +    ++  E+ +  
Sbjct: 443 MIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQG 502

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I P+  SY+ LID LC+ G M+ A   +    +  + P V T+  +I G+CK G   E M
Sbjct: 503 IQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGM 562

Query: 188 QLYDSMLRNGIMP 200
           +   +MLR+ + P
Sbjct: 563 EWLTTMLRSKLRP 575



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 107/192 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ A K++ ++ D+G     ++YN +I G CS  ++ EA  LFE+++   +  N IT+ 
Sbjct: 417 NLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYN 476

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FCKEG++ +   +  ++L++G + +  +Y+ LID   +  +M++A  ++++M   
Sbjct: 477 ALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNR 536

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P + ++  +I G CK+G   E +      L + L P   ++  LI+   +  R  +A
Sbjct: 537 GMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDA 596

Query: 187 MQLYDSMLRNGI 198
           + + DSML+ G 
Sbjct: 597 LLVLDSMLKIGF 608



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 95/194 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A+ +FGQL   G+   I T+N+++ G     R+D   +L+ ++    +  +  T   
Sbjct: 208 VEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGY 267

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ AFC E R+ D   +  ++LE G       ++ LI G+ K +      D+   M   N
Sbjct: 268 LVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARN 327

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +P+I +Y  +++GLCK G   E    F    D    PD V Y  +I G C+     +A 
Sbjct: 328 RAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDAR 387

Query: 188 QLYDSMLRNGIMPD 201
           +L+  M++ G +P+
Sbjct: 388 KLWFEMIQKGFLPN 401



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 92/195 (47%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           ++   +D   +L+G++ +  +  D+ T   ++  +C  NR+ +   L  ++    + P +
Sbjct: 238 VRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRN 297

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             F  LI  FCK+      + +   M+ +    ++ TY  +++G  K       F V+++
Sbjct: 298 AAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKD 357

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + +   +P+ V Y+ +I GLC+   + +A   +   +    LP+  TY  +I GY K G 
Sbjct: 358 LKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGN 417

Query: 183 PTEAMQLYDSMLRNG 197
             EA ++Y  M   G
Sbjct: 418 LEEAWKMYREMCDKG 432



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 90/195 (46%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L  ++ + G+ P    +N +I G+C          L   +      P+  T+  +++  C
Sbjct: 284 LLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLC 343

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G+  +   +F  + ++G   + V Y+ +I G  + + +  A  ++ EM +    PN  
Sbjct: 344 KGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEY 403

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +I G  K G +EEA   +    D       V+Y ++I+G C  G+  EA  L++ M
Sbjct: 404 TYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEM 463

Query: 194 LRNGIMPDGLLLSTL 208
              GI+ + +  + L
Sbjct: 464 SHKGILRNHITYNAL 478



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 79/171 (46%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C    ++EA+ +F +L  + +  +  T+  ++    + GR+D    ++ +M+E    A+V
Sbjct: 203 CKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADV 262

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            T   L+  +     +    ++   + E+ + P   +++ LI G CK           H 
Sbjct: 263 HTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHS 322

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +  +  PD+ TY  ++ G CK G+  E  +++  +   G  PD ++ +T+
Sbjct: 323 MIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTM 373



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/192 (19%), Positives = 80/192 (41%), Gaps = 4/192 (2%)

Query: 11  ALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +L+ F  L+ + G  PD  + N +          + A      L      P   +    I
Sbjct: 143 SLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSF---LDSTNFNPKPASLEAYI 199

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              CK G +++A  +F ++   G  A++ T++ ++ G  ++  +   +++Y EM E+++ 
Sbjct: 200 RCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVV 259

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++ +   L+   C    + +        L++ ++P    +  LI G+CK         L
Sbjct: 260 ADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDL 319

Query: 190 YDSMLRNGIMPD 201
             SM+     PD
Sbjct: 320 LHSMIARNRAPD 331



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 53/103 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +  A  L+  + +RG+EP + T++ +I G+C      E ++    +   +L+P 
Sbjct: 517 LCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQ 576

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
             +F  LI    +  R+DDA ++   ML+ G + ++   + L+
Sbjct: 577 KKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLV 619



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 59/142 (41%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +     L  +L D+G++P   +Y  +I   C    +  A  L++ +    ++P   
Sbjct: 484 KEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVC 543

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T   +I  FCK+G   +     + ML    +    ++  LI    +   +  A  V + M
Sbjct: 544 THDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSM 603

Query: 124 CENNISPNIVSYSILIDGLCKR 145
            +     +I   + L+  LC++
Sbjct: 604 LKIGFRLSISICNSLVTKLCEK 625


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 30/239 (12%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---- 57
           L +   + AA K+  ++  +G  PD +TY TI+   C L+RLDEA ++   +  V     
Sbjct: 173 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYN 232

Query: 58  --------------------------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
                                     L+PN IT+T ++DAFCK G +  A  + ++M+  
Sbjct: 233 AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVIT 292

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   NVVT++ L+ G F    +  A D++  M     +P+ VSY+ILI GLC  G ++ A
Sbjct: 293 GCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 352

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +    +   P+V TY+ LI G+ KAG    A+ +++ M R+G  P+ ++ + + D
Sbjct: 353 SSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 411



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 35/236 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  +     +   +  RGL+P++ITY TI+  +C    L  A  +  ++      PN
Sbjct: 238 LCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPN 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG--PKA------------------------ 95
            +TFT L+     +GR+ DA  M+  M+ +G  P                          
Sbjct: 298 VVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILN 357

Query: 96  ---------NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
                    NV TYS LIDG+ K+ ++  A  ++ +M  +   PN+V Y+ ++D  CK+ 
Sbjct: 358 SMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 417

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           +  +A       L  +  P+ VT+  LIR  C   R   A+ ++  M R+G +P+G
Sbjct: 418 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 473



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +   +   G  P++ TY+T+I G+     L  A+ ++  ++    KPN + +T 
Sbjct: 349 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D FCK+   + A  +  KML +    N VT++ LI      + +  A  V+ EM  + 
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +Y+ LI GL + G   +AL+       + +   +VTY  ++ G C+     EAM
Sbjct: 469 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
                M+  GI P+    S +
Sbjct: 529 VFVGKMIVQGIQPNAFTFSAI 549



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 102/219 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  +  +  AL ++  +   G  P  ++YN +I G CS+  L  A  +   +      PN
Sbjct: 308 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 367

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++ LID F K G +  A  +++ M   G K NVV Y+ ++D + K      A  + +
Sbjct: 368 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 427

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   N  PN V+++ LI  LC    +  AL  FH    +  +P+  TY  LI G  + G
Sbjct: 428 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 487

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              +A+ +   M  +GI    +  +T+     Q+  S+E
Sbjct: 488 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 526



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L  A+ ++  ++  G +P+++ Y  ++  +C     ++A  L +K+      PN++
Sbjct: 380 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 439

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI + C   R+  A  +F +M   G   N  TY+ LI G F+  N   A  +  EM
Sbjct: 440 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 499

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I  ++V+Y+ ++ GLC+  +  EA+      +   + P+  T++ +I  YCK G  
Sbjct: 500 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 559

Query: 184 TEAMQLYDSM 193
             A  +  +M
Sbjct: 560 RMAAWMLGAM 569



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 98/217 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   + A  L  ++      P+ +T+NT+I   C   R+  A+ +F ++      PN  
Sbjct: 415 KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 474

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI    +EG   DA  M ++M   G + ++VTY+ ++ G  +++  + A     +M
Sbjct: 475 TYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 534

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN  ++S +I   CK G +  A +        +   +++ Y IL+   C   + 
Sbjct: 535 IVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 594

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +AM     ML  GI P+ +  + L     ++ G  E
Sbjct: 595 VDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIE 631



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E +   AL +  ++   G+E  ++TYNT++ G C      EA+    K+    ++PN
Sbjct: 483 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 542

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF+ +I A+CKEG +  A  M   M       N++ Y+ L+        +  A     
Sbjct: 543 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 602

Query: 122 EMCENNISPNIVSYSILIDGLCKR-GLMEEALYAFHCALD 160
           +M    I PN V++++L+ G+ +  G +E + +  H  ++
Sbjct: 603 KMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 642



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 37/228 (16%)

Query: 9   DAALKLFGQLTD-----RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           D ALK F +        R  EP +  YN +I      N +   V +++ +    + PN  
Sbjct: 107 DRALKTFYRAVHDLGCARPTEPRL--YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVF 164

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID------------------ 105
           T+ +L+ A C+  R+  A  M  +M  KG   + VTY+ ++                   
Sbjct: 165 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 224

Query: 106 ------------GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALY 153
                          +   M+  F V  +M    + PN+++Y+ ++D  CK G +  A  
Sbjct: 225 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACA 284

Query: 154 AFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
                +     P+VVT+  L+RG    GR  +A+ ++  M+  G  P 
Sbjct: 285 ILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 332



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 5/143 (3%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA  +E  +    +++  M + G   NV TY+ L+    ++  + +A  + +EM    
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+ V+Y+ ++  LCK   ++EA           + P   +Y  ++   C+  R  E  
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLAA-----MPPVAASYNAIVLALCREFRMQEVF 248

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            +   M+  G+ P+ +  +T+ D
Sbjct: 249 SVVSDMVGRGLQPNVITYTTIVD 271



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 69  IDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + AF + G  D A   F + +             Y+ LID   +   + +   VY+ M +
Sbjct: 97  VGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRK 156

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
           + + PN+ +Y++L+  LC+   +  A             PD VTYA ++   CK  R  E
Sbjct: 157 DGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDE 216

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
           A ++  +M       + ++L+   ++ +Q
Sbjct: 217 ATEVLAAMPPVAASYNAIVLALCREFRMQ 245


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 112/201 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  +  Q+ D  + P+  TYN++I GY S  +  EAV++ ++++    +PN +T+ +
Sbjct: 172 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNM 231

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK G   +A  +F+ M++ GPK +  TY  L+ GY    N+    +V + M +N 
Sbjct: 232 LIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNG 291

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +  N  ++SI I   CK G ++EA   F        +PD+VTY  +I G CK GR  +AM
Sbjct: 292 MRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAM 351

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
             +  M+ +G+ P+ +  +TL
Sbjct: 352 SRFCQMIDDGLSPNIITFTTL 372



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 103/193 (53%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +   G+  +  T++  I  YC   RLDEA   F K+  +   P+ +T+T +ID  CK GR
Sbjct: 287 MVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGR 346

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +DDA   F +M++ G   N++T++ LI G+      + A +++ EM +  I P++  ++ 
Sbjct: 347 LDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTA 406

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +ID L K G + EA   F         P+VV+Y  +I GY  AG   E M+L D ML  G
Sbjct: 407 MIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 466

Query: 198 IMPDGLLLSTLAD 210
           + P  +  +TL D
Sbjct: 467 LKPTAVTFNTLLD 479



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 111/198 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F  +   G +PD  TY +++ GY +   L E   + + +    ++ N  TF+I I 
Sbjct: 245 AREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIY 304

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+CK GR+D+A++ F KM + G   ++VTY+ +IDG  K   +  A   + +M ++ +SP
Sbjct: 305 AYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 364

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI++++ LI G    G  E+A   F+  +D  + PDV  +  +I    K G+ TEA +L+
Sbjct: 365 NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424

Query: 191 DSMLRNGIMPDGLLLSTL 208
           D M R G  P+ +  +T+
Sbjct: 425 DLMPRAGAKPNVVSYNTM 442



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 92/174 (52%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+++Y+T+I G+     + +A  LF K+    + PN +T   +ID  CK   MD A  +
Sbjct: 119 PDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 178

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             +M+++    N  TY+ LI GY  S     A  + +EM  +   PN+V+Y++LID LCK
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCK 238

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
            G   EA   F+  + +   PD  TY  L+ GY   G   E   + D M++NG+
Sbjct: 239 SGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM 292



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITFT 66
           L+      GQ+   GL  D + +  ++   C+  R  +A+ +   ++  +   P+  +++
Sbjct: 29  LNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYS 88

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
            L+   C E + ++A  +   M E G     +VV+YS +I G+FK  ++  A+ ++ +M 
Sbjct: 89  TLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKML 148

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           ++ I PN+V+ + +IDGLCK   M++A       +D H++P+  TY  LI GY  +G+ T
Sbjct: 149 DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWT 208

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           EA+++   M R+G  P+ +  + L D
Sbjct: 209 EAVRILKEMSRDGQRPNVVTYNMLID 234



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 16/193 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+  F Q+ D GL P+IIT+ T+I G+    + ++A +LF ++    + P+
Sbjct: 341 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPD 400

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              FT +ID   KEG++ +A  +F  M   G K NVV+Y+ +I GYF +  +     + +
Sbjct: 401 VTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 460

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P  V+++ L+DG+   GL                 PDV T   LI   C+ G
Sbjct: 461 DMLLIGLKPTAVTFNTLLDGMVSMGLK----------------PDVDTCKTLIDSCCEDG 504

Query: 182 RPTEAMQLYDSML 194
           R  + + L+  ML
Sbjct: 505 RIEDILTLFREML 517



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 19/117 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A KLF  +   G +P++++YNT+I GY     + E ++L + +  + LKP 
Sbjct: 411 LFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 470

Query: 62  SITFTIL-------------------IDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           ++TF  L                   ID+ C++GR++D   +F +ML K  K + +T
Sbjct: 471 AVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             ++P+I ++ ILI   C  G +     A    +   L  D V +  L+R  C   R ++
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 186 AMQLY-DSMLRNGIMPDGLLLSTL 208
           AM +    M   G  PD    STL
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTL 90


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 35/244 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+    +D+A ++F  +    ++PD++TYNT+I GYC   +  +A++    +    L+ +
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEAD 291

Query: 62  SIT-----------------------------------FTILIDAFCKEGRMDDATMMFS 86
            IT                                   F+++I   CKEG++++   +F 
Sbjct: 292 KITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFE 351

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M+ KG K NV  Y+ LIDGY K+ +++ A  +   M +   +P++V+YS++++GLCK G
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNG 411

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +EEA+  F     N L  + + Y+ LI G  KAGR  EA +L++ M   G   D    +
Sbjct: 412 RVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471

Query: 207 TLAD 210
            L D
Sbjct: 472 ALID 475



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+    +F  +  +G +P++  Y  +I GY     +++A++L  ++      P+
Sbjct: 337 LCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPD 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++++++  CK GR+++A   F      G   N + YS LIDG  K+  +  A  ++E
Sbjct: 397 VVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV-TYAILIRGYCKA 180
           EM E   + +   Y+ LID   K G ++EAL  F    +       V TY ILI G  K 
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKE 516

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
            R  EA++L+D M+  GI P    L  L+
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACLRALS 545



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 105/203 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++  L ++ ++ + G+EP + TYN ++ G  S   +D A ++FE +   ++KP+ +T+  
Sbjct: 203 VEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNT 262

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +CK G+   A      M  KG +A+ +TY  +I   +   +  S   +Y+EM E  
Sbjct: 263 MIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKG 322

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +     ++S++I GLCK G + E    F   +     P+V  Y +LI GY K G   +A+
Sbjct: 323 LQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAI 382

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   M+  G  PD +  S + +
Sbjct: 383 RLLHRMIDEGFNPDVVTYSVVVN 405



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 1/200 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A++L  ++ D G  PD++TY+ ++ G C   R++EA+  F+      L  NS+
Sbjct: 374 KTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSM 433

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            ++ LID   K GR+D+A  +F +M EKG   +   Y+ LID + K   +  A  +++ M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRM 493

Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E      + +Y+ILI G+ K    EEAL  +   +D  + P       L  G C +G+
Sbjct: 494 EEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGK 553

Query: 183 PTEAMQLYDSMLRNGIMPDG 202
              A ++ D +   G++ D 
Sbjct: 554 VARACKILDELAPMGVILDA 573



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 41/212 (19%)

Query: 52  KLTCVQLKPNSITFTI-----LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
           +  C +++      T+     LI +F K G +++   ++ KM E G +  + TY+ L++G
Sbjct: 172 RFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231

Query: 107 YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
              +  + SA  V+E M    I P++V+Y+ +I G CK G  ++AL          L  D
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEAD 291

Query: 167 VVTY-----------------------------------AILIRGYCKAGRPTEAMQLYD 191
            +TY                                   +++I G CK G+  E   +++
Sbjct: 292 KITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFE 351

Query: 192 SMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +M+R G  P+  + + L D     +GS E  I
Sbjct: 352 NMIRKGSKPNVAIYTVLID-GYAKTGSVEDAI 382


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 109/195 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            LD A++    + ++GL P II +N++I  Y      D+A + ++ +    L P+  T +
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 515

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+      GR+ +AT +  +M+EKG   N + ++ L+D +FK  ++  A  ++ EM   
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I P++V++S  IDGL K+GL+EEA   F   L   L+P+   Y  LI G+CK G+  EA
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 635

Query: 187 MQLYDSMLRNGIMPD 201
           ++L   M   G++PD
Sbjct: 636 LKLEKVMRHRGLLPD 650



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
             K   +  A  L+G++  RG+ PD++ ++  I G      ++EA  +F ++    L PN
Sbjct: 556 FFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 615

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  +  LI  FCK G++++A  +   M  +G   ++ T + +I G  K   M+SA +V+ 
Sbjct: 616 NFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM 675

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +  +SP+I++Y+ LI+G CK   M  A    +    +   PD+ TY I I G+C + 
Sbjct: 676 DMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSR 735

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R   A+ + D ++  GI+P+ +  +++
Sbjct: 736 RMNRAVLMLDELVSAGIVPNTVTYNSM 762



 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 1/200 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  +F ++  +GL P+   YN++ICG+C   +L+EA++L + +    L P+
Sbjct: 591 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 650

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T  ++I   CK+GRM  A  +F  M + G   +++TY+ LI+GY K+ +M +A ++  
Sbjct: 651 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 710

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +  +P++ +Y+I I G C    M  A+      +   ++P+ VTY  ++ G C + 
Sbjct: 711 RMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SD 769

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               AM L   +L+   +P+
Sbjct: 770 ILDRAMILTARLLKMAFVPN 789



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 104/198 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL  F  + +RG  P ++T+NT+I  +C    + EA +LF+ L  +   PN+I +  L++
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 379

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K   +D A M++ +M +KG   + +T++ L+ G++K    +    + +++    + P
Sbjct: 380 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP 439

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +   + I + GLC  G ++EA+      L+  L P ++ +  +I  Y +AG   +A + Y
Sbjct: 440 DRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY 499

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+  G+ P     S+L
Sbjct: 500 KLMVHFGLTPSPSTCSSL 517



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 1/180 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ ALKL   +  RGL PDI T N II G C   R+  A+ +F  +    L P+ IT+  
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ +CK   M +A  + ++M   G   ++ TY+  I G+  S+ M  A  + +E+    
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN V+Y+ +++G+C   +++ A+      L    +P+VVT  +L+  + K G P   +
Sbjct: 752 IVPNTVTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTL 810



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 6/211 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A +L GQ+ ++GL  + + +  ++  +     +  A  L+ ++    + P+ + F+
Sbjct: 526 RLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFS 585

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             ID   K+G +++A  +F +ML KG   N   Y+ LI G+ K   +  A  + + M   
Sbjct: 586 AFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHR 645

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+I + +++I GLCK+G M  A+  F       L PD++TY  LI GYCKA     A
Sbjct: 646 GLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNA 705

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
             L + M  +G  PD      L  YN++  G
Sbjct: 706 DNLVNRMYASGSNPD------LTTYNIRIHG 730



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K   +D A  L+ ++  +G+ PD IT+N ++ G+    R ++  +L + ++ + L P+ 
Sbjct: 382 VKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR 441

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
             F I +   C  GR+D+A      MLEKG   +++ ++ +I  Y ++     AF+ Y+ 
Sbjct: 442 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKL 501

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ++P+  + S L+ GL   G ++EA       ++  L  + + + +L+  + K G 
Sbjct: 502 MVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGD 561

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              A  L+  M R GI PD +  S   D
Sbjct: 562 VVGAQSLWGEMERRGIFPDVVAFSAFID 589



 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 98/189 (51%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KLF  +  RG +P   T++ II G+C    +     L   +     +PN+  + I+I+A 
Sbjct: 252 KLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINAC 311

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C  GR  DA   F+ M+E+G    VVT++ +I+ + K  N+  A  +++ + E   SPN 
Sbjct: 312 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 371

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           + Y+ L++G  K   +++A   +       + PD +T+ IL+ G+ K GR  +  +L   
Sbjct: 372 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 431

Query: 193 MLRNGIMPD 201
           +   G++PD
Sbjct: 432 ISVLGLLPD 440



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  + +A+ +F  +   GL PDIITYNT+I GYC    +  A  L  ++      P+
Sbjct: 661 LCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPD 720

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I I  FC   RM+ A +M  +++  G   N VTY+ +++G   S  +  A  +  
Sbjct: 721 LTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTA 779

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            + +    PN+V+ ++L+    K+G+ E  L   H   +     D +TY I+ + +
Sbjct: 780 RLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIMDKAH 835



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 93/187 (49%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           E D    ++++  + +     +A+++  ++  V ++P++    IL     + G   +   
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWK 252

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F  ++ +GP+    T+S +I G+ +   +     +   M + +  PN  +Y+I+I+  C
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            RG   +AL  F+  ++    P VVT+  +I  +CK G   EA +L+D +   G  P+ +
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 372

Query: 204 LLSTLAD 210
           + +TL +
Sbjct: 373 MYNTLMN 379


>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
          Length = 678

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++ K C    AL++  +L+  G +PD++TYN +I   C   RL++A  +  +L    L+P
Sbjct: 365 LVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEP 424

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+ IL+ A C   R D+   +   M +     +V TY+  I+ + K  ++  A DV 
Sbjct: 425 NGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVL 484

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M  NN SP+IV+ + L++ + K+G++EEAL    C  +N     ++TY  LI    K 
Sbjct: 485 ERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKK 544

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               +AM L+D ML +GI PD +   +L
Sbjct: 545 AEVKKAMVLFDEMLSDGISPDDITYGSL 572



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K    + A  +   +   G  PD I+ N +I   C   +L  A+Q+ E +      P+
Sbjct: 261 LVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPS 320

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF  LI     +   D A   + + L  G     +T + L+D   K+   + A +V +
Sbjct: 321 GITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLD 380

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+      P++V+Y+ LI   CK G + +A +         L P+  TY IL+   C   
Sbjct: 381 ELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMR 440

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  E   L + M +    PD
Sbjct: 441 RWDEVCDLLEDMNQVNRDPD 460



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 88/195 (45%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HLD A+ +  ++      PDI+T NT++        ++EA+ +   +     K   IT+ 
Sbjct: 476 HLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYN 535

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA  K+  +  A ++F +ML  G   + +TY  L+ G+ K      A D+  +M   
Sbjct: 536 TLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTL 595

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
                  ++ ++I  LC+ G +E A       L  + +P     + ++    K+G   EA
Sbjct: 596 GFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEA 655

Query: 187 MQLYDSMLRNGIMPD 201
             L+  ++   I+ +
Sbjct: 656 QMLHQKLVECEILKE 670



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 6/201 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           LI+ C +   + L GQ+      P+      II G     + ++A  + E +      P+
Sbjct: 232 LIQACCVIDEMVLHGQI------PETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPD 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I+  +LI   C+ G++  A  +   M   G   + +T++ LI   F  +    A   ++
Sbjct: 286 TISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWK 345

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E       P  ++ ++L+D +CK    ++AL            PDVVTY  LI   CKAG
Sbjct: 346 EQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAG 405

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           R  +A  +   +   G+ P+G
Sbjct: 406 RLNDAKFILTRLAAEGLEPNG 426



 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 66/127 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A+ LF ++   G+ PD ITY +++ G+C  +  DEA+ L  ++  +  +  
Sbjct: 541 LAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVK 600

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF ++I A C++G+++ A  +   ML K         S ++    KS   K A  +++
Sbjct: 601 TTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQ 660

Query: 122 EMCENNI 128
           ++ E  I
Sbjct: 661 KLVECEI 667



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 74/148 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++ AL +   + + G +  +ITYNT+I        + +A+ LF+++    + P+ I
Sbjct: 508 KKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDI 567

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  FCK+   D+A  + ++ML  G +    T+  +I    +   +++A ++ + M
Sbjct: 568 TYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVM 627

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
              N  P     S ++  + K G  +EA
Sbjct: 628 LSKNSIPGNSLCSSIVTKVAKSGWNKEA 655



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 75/165 (45%)

Query: 37  YCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
           YC+  +L +A  + +++      P +     +I    K G+ + A  +   M+  G   +
Sbjct: 226 YCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPD 285

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
            ++ + LI    +   + SA  V E+M  +  SP+ ++++ LI  +  + + + A+  + 
Sbjct: 286 TISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWK 345

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L     P  +T  +L+   CK   P +A+++ D +   G  PD
Sbjct: 346 EQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPD 390



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 60/149 (40%)

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +C  G++  A  +  +M+  G          +I G  K+     A  V E M  +   P+
Sbjct: 226 YCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPD 285

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
            +S ++LI  LC+ G +  AL        +   P  +T+  LIR          A+  + 
Sbjct: 286 TISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWK 345

Query: 192 SMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             LR G  P  +  + L D   ++ G Q+
Sbjct: 346 EQLRLGWPPYEMTSTLLVDLVCKNCGPQK 374


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 122/219 (55%), Gaps = 17/219 (7%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +  A +    + + G+  +   YN +I  YC +  L+EA+    ++T V ++PN ++++
Sbjct: 376 QMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYS 435

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   K G+M  A  ++++M+ KG + NVVTY+ LI G+ K+  + +AF +++EM EN
Sbjct: 436 SLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIEN 495

Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL-----YA------FHCALDNH------LLPDVVT 169
            ISPN ++ S+L+DGLC+   ++EA+     Y+       H    N       L+P+ V 
Sbjct: 496 GISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVI 555

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           Y  LI G    G+  EA +L+  M ++G++PD    + L
Sbjct: 556 YMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLL 594



 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 111/200 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A +LF ++  RGL P ++TYNT+I        + +A ++++++   Q+ PN
Sbjct: 161 LVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPN 220

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +I A C+EG + DA  +F  M E G + N  TY+ L+ G+ +  ++ SA  +Y+
Sbjct: 221 VVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQ 280

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ ++ ++PN V ++ LIDG CK     EA   F       + P V  Y  L+ G  ++G
Sbjct: 281 ELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSG 340

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
              EA+ LY  M R G+ PD
Sbjct: 341 NAQEALALYQEMTRLGLCPD 360



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 106/207 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K      A  +F ++   G+ P +  YN+++ G        EA+ L++++T + L P+  
Sbjct: 303 KAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEF 362

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T +I++   C  G+M  A      + E G   N   Y+ LID Y +  N++ A      M
Sbjct: 363 TCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRM 422

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E  I PN+VSYS LIDG  KRG M+ A+  +   +   + P+VVTY  LI G+ K G  
Sbjct: 423 TEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGI 482

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A +L+  M+ NGI P+ + +S L D
Sbjct: 483 DAAFRLHKEMIENGISPNAITVSVLVD 509



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 10/215 (4%)

Query: 2   LIKECHLDA----ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LI  C        A +++ Q+  + ++P+++TY T+IC  C    + +A +LF+ +    
Sbjct: 192 LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAG 251

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           ++PN  T+ +L+   C+   ++ A +++ ++L+ G   N V ++ LIDG+ K++    A 
Sbjct: 252 MQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAK 311

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            ++ EM    ++P +  Y+ L+DG  + G  +EAL  +       L PD  T +I++RG 
Sbjct: 312 GMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGL 371

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
           C  G+    M + D  L+ G+  DG+ L+  A YN
Sbjct: 372 CDGGQ----MHVADRFLQ-GVQEDGVNLNAAA-YN 400



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 99/179 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L+ ++T  GL PD  T + ++ G C   ++  A +  + +    +  N+  +  LID
Sbjct: 345 ALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALID 404

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C+ G +++A    ++M E G + NVV+YS LIDG+ K   M+ A  +Y EM    I P
Sbjct: 405 EYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEP 464

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+V+Y+ LI G  K G ++ A       ++N + P+ +T ++L+ G C+  R  EA++ 
Sbjct: 465 NVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRF 523



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 23/214 (10%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L+ AL    ++T+ G+EP++++Y+++I G+    ++  A+ ++ ++    ++PN +T+T
Sbjct: 411 NLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYT 470

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF--------- 117
            LI    K G +D A  +  +M+E G   N +T S L+DG  +   ++ A          
Sbjct: 471 ALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGL 530

Query: 118 ---DVY--------EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
              D++        EE C   + PN V Y  LI GL   G   EA   F     + ++PD
Sbjct: 531 KCSDIHSVFSNFTIEEEC---LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPD 587

Query: 167 VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             TY +LIRG C  G    AM LY  M++ G+ P
Sbjct: 588 SFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL +F +L  R L P +   N ++ G     R   A +LF+++    L P+ +T+  
Sbjct: 135 LDEALYVFRRL--RTL-PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNT 191

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+A   +G +  A  ++ +M+ +    NVVTY+ +I    +   +  A  +++ M E  
Sbjct: 192 LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAG 251

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN  +Y++L+ G C+R  +  A+  +   L + L P+ V +  LI G+CKA R +EA 
Sbjct: 252 MQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAK 311

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            ++  M R G+ P   + ++L D   +S  +QE
Sbjct: 312 GMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQE 344



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           +L+  L + GL++EALY F        LP +     ++ G  KA RP  A +L+D MLR 
Sbjct: 124 VLVIALSQMGLLDEALYVFR---RLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRR 180

Query: 197 GIMPDGLLLSTL 208
           G++P  +  +TL
Sbjct: 181 GLVPSVVTYNTL 192



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 52/151 (34%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ--------------- 48
           K   +DAA +L  ++ + G+ P+ IT + ++ G C  NR+ EAV+               
Sbjct: 478 KNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHS 537

Query: 49  -------------------------------------LFEKLTCVQLKPNSITFTILIDA 71
                                                LF  +    + P+S T+T+LI  
Sbjct: 538 VFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRG 597

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
            C  G + +A M+++ M++ G K       C
Sbjct: 598 QCMLGYVLNAMMLYADMMKIGVKPTRYKIEC 628


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 1   MLIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
           +++KE + ++ A  +F  +  R + PD+ +Y  II   C +  +DEA+ LF ++ C  + 
Sbjct: 283 VMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGIT 342

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           P+ +T++ LID  CK  R+  A  +  +M  +G  A+V+TY+  +    K+  +  A  +
Sbjct: 343 PDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVAL 402

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            +++ +  I PNI +Y+ILIDGLCK G  E A   F   L       V TY I+I G C 
Sbjct: 403 VKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCL 462

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            G   EAM L + M  NG  PD +   T+
Sbjct: 463 EGLFDEAMTLLEKMEDNGCTPDVVTYETI 491



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 110/210 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L+ +L    + P I+T+NT+I  YC L  +D A  +  K+  +   P++IT T LI 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G++ +A      ++ +G + N V+Y  LI+G  K    ++A  V  ++    ++ 
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V YS +ID LCK  L+ EA   +   +   + PDVVT++ LI G+C  G+  EA  L+
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
             M+   I PD    + L D   +   ++E
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKE 276



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 108/196 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL LF ++  +G+ PD +TY+++I G C   R+  A +L +++       + IT+T 
Sbjct: 326 VDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            + A CK  ++D A  +  K+ ++G + N+ TY+ LIDG  K    ++A  +++++    
Sbjct: 386 FLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKG 445

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
               + +Y+I+I+GLC  GL +EA+       DN   PDVVTY  +IR   K     +A 
Sbjct: 446 YKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAE 505

Query: 188 QLYDSMLRNGIMPDGL 203
           +L   M+  G++ + +
Sbjct: 506 KLLREMIARGLLEEKV 521



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 6   CHL---DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CHL   D A  +  ++   G  PD IT  T+I G C   ++ EA+   + +     + N 
Sbjct: 94  CHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNE 153

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +++ ILI+  CK G    A  +  K+  K    NVV YS +ID   K + +  A+++Y +
Sbjct: 154 VSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQ 213

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    +SP++V++S LI G C  G  +EA   FH  +  ++ PDV T+ IL+   CK G 
Sbjct: 214 MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGS 273

Query: 183 PTEAMQLYDSMLR 195
             E   +   M++
Sbjct: 274 TKETKNVLAVMMK 286



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 61/270 (22%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +  A +L+ Q+  + + PD++T++ +I G+C + +  EA  LF ++    + P+
Sbjct: 198 LCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPD 257

Query: 62  SITFTILIDAFCKEGR-------------------------------------------- 77
             TF IL+DA CKEG                                             
Sbjct: 258 VCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIII 317

Query: 78  --------MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
                   +D+A  +F++M  KG   + VTYS LIDG  KS+ +  A+++ ++M      
Sbjct: 318 KRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQP 377

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++++Y+  +  LCK   +++A+       D  + P++ TY ILI G CK GR   A  +
Sbjct: 378 ADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVI 437

Query: 190 YDSMLRNG---------IMPDGLLLSTLAD 210
           +  +L  G         IM +GL L  L D
Sbjct: 438 FQDLLIKGYKVTVWTYNIMINGLCLEGLFD 467



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 16/167 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A +L  Q+  RG   D+ITY + +   C  +++D+AV L +K+    ++PN
Sbjct: 355 LCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPN 414

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ ILID  CKEGR ++A ++F  +L KG K  V TY+ +I+G         A  + E
Sbjct: 415 INTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLE 474

Query: 122 EMCENNISPNIVSYSILIDGLCK----------------RGLMEEAL 152
           +M +N  +P++V+Y  +I  L K                RGL+EE +
Sbjct: 475 KMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 6/207 (2%)

Query: 7   HLDA--ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDE--AVQLFEKLTCVQLKPNS 62
           H+D   A+  F ++      P II +N I+      N  +   A+ L+ +L    + P+ 
Sbjct: 24  HVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSI 83

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TF  +I+ +C  G MD A  + +K+L+ G   + +T + LI G   +  +  A   ++ 
Sbjct: 84  VTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDH 143

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAG 181
           +       N VSY ILI+GLCK G    AL      +D  L+  +VV Y+ +I   CK  
Sbjct: 144 VIARGFRLNEVSYGILINGLCKMGETRAALQVLR-KIDGKLVNTNVVMYSTIIDSLCKEK 202

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             TEA +LY  M+   + PD +  S L
Sbjct: 203 LVTEAYELYSQMIVKKVSPDVVTFSAL 229


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 49/249 (19%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A  L+ ++  + + P ++TYNT+ICG C + +L +A+ L  K+    + P 
Sbjct: 162 LCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPT 221

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS------ 115
             TF+ILIDAFCKEG+M +A  +F+ M+++  K N+VTY+ L+DG+     +K       
Sbjct: 222 VYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFN 281

Query: 116 --------AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL--------------- 152
                   A +++EEM    I P++V Y+ LIDGLCK G    AL               
Sbjct: 282 TMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDI 341

Query: 153 YAFHCAL--------------------DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           + ++  L                    D  + P V TY ILI G CK+GR  +A ++++ 
Sbjct: 342 FTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFED 401

Query: 193 MLRNGIMPD 201
           +L  G   D
Sbjct: 402 LLVKGYNTD 410



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 14/213 (6%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN--------------RLDEAVQL 49
           KE  +  A  +F  +    ++P+I+TYN+++ G+  +N               +DEA+ L
Sbjct: 234 KEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNL 293

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           FE++   Q+ P+ + +  LID  CK GR   A     +M  +G   ++ TY+ L+D   K
Sbjct: 294 FEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCK 353

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
           + ++  A ++  ++ +  I P++ +Y+ILI+GLCK G +++A   F   L      DV T
Sbjct: 354 NYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYT 413

Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           Y  +I+G+CK G   E + +   M  +G  PD 
Sbjct: 414 YNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDA 446



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 107/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           +  +F  +  +G   D IT+ T+I G C    + +A+   +K+     K N +++  LI+
Sbjct: 66  SFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLIN 125

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G+   A     ++  K  + +VV Y+ +IDG  K + +  AF++Y EM    I P
Sbjct: 126 GLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICP 185

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ LI GLC    +++A+   H  +   + P V T++ILI  +CK G+  EA  ++
Sbjct: 186 SVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVF 245

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M++  + P+ +  ++L D
Sbjct: 246 AVMMKEDVKPNIVTYNSLMD 265



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 111/217 (51%), Gaps = 14/217 (6%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  AL    ++  +G + + ++Y T+I G C + +   A++   ++    ++P+ + +  
Sbjct: 98  IHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNT 157

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +ID  CK+  ++DA  ++ +M+ K    +VVTY+ LI G      +K A  +  +M   +
Sbjct: 158 IIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILED 217

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY-----CKAGR 182
           I+P + ++SILID  CK G M+EA   F   +   + P++VTY  L+ G+      K  +
Sbjct: 218 INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAK 277

Query: 183 PT---------EAMQLYDSMLRNGIMPDGLLLSTLAD 210
                      EAM L++ M    I PD ++ ++L D
Sbjct: 278 SIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLID 314



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++  + + PD++ YN++I G C   R   A++   ++      P+  T+  
Sbjct: 287 VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNS 346

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA CK   +D A  + +K+ ++G + +V TY+ LI+G  KS  +K A  V+E++    
Sbjct: 347 LLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKG 406

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            + ++ +Y+ +I G CK+GL +E L       D+   PD     I+IR     G   +A 
Sbjct: 407 YNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAG 466

Query: 188 QLYDSMLR 195
           +  + ++R
Sbjct: 467 KFREMIVR 474



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K  H    + L  Q+   GL  +++T + +I  Y  L +   +  +F  +       +
Sbjct: 22  LVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSD 81

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +ITFT LI   C +G +  A     K++ +G K N V+Y  LI+G  K    ++A +   
Sbjct: 82  AITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLR 141

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +    + P++V Y+ +IDGLCK  L+ +A   +   +   + P VVTY  LI G C   
Sbjct: 142 RIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMA 201

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A+ L   M+   I P     S L D
Sbjct: 202 QLKDAIGLLHKMILEDINPTVYTFSILID 230



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 2/192 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           L  +   P I  +  I+      N     V L  ++    L  N +T +ILI+ + + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              +  +F+ +L+KG  ++ +T++ LI G      +  A   ++++       N VSY  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           LI+GLCK G    AL  F   +D  L+ PDVV Y  +I G CK     +A  LY  M+  
Sbjct: 123 LINGLCKVGQTRAAL-EFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 197 GIMPDGLLLSTL 208
            I P  +  +TL
Sbjct: 182 RICPSVVTYNTL 193


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           L K   LD A  L  ++  R    PD++TY +II G+  L +L+ A  LFE++    ++P
Sbjct: 243 LCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEP 302

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
             +TF +LID F K G M  A  M  KM       +VVT++ LIDGY ++ +++    V+
Sbjct: 303 TVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVW 362

Query: 121 EEMCENNISPNIVSYSILI-----------------------------------DGLCKR 145
           + M   N+SPNI +YS++I                                   DG CK 
Sbjct: 363 DVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKA 422

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G ++EA        +    PD VT+ ILI G+C  GR  EA+ ++  ML  G  PD + +
Sbjct: 423 GNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITI 482

Query: 206 STLADYNLQSSGSQE 220
           S+L    L++    E
Sbjct: 483 SSLVACLLKAGKPSE 497



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 114/204 (55%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITFT 66
           ++   +LF  +   G  PD++TYNT+I G C  N LD A  L +++       P+ +T+T
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  F K G+++ A+++F +M+  G +  VVT++ LIDG+ K  NM +A  ++E+M   
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           +  P++V+++ LIDG C+ G +   L  +      ++ P++ TY+++I   CK  R  EA
Sbjct: 334 SCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEA 393

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L   +  + + P   + + + D
Sbjct: 394 RDLLRQLKCSDVFPKPFIYNPVID 417



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 13/207 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  A+ LF +       P+  T+N +I G C +  +++  +LF  +      P+
Sbjct: 173 LVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPD 232

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVY 120
            +T+  LI   CK   +D A  +  ++  +     +V+TY+ +I G+ K   +++A  ++
Sbjct: 233 VVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLF 292

Query: 121 EEMCENNISPNIVSYSILIDGLCKRG------LMEEALYAFHCALDNHLLPDVVTYAILI 174
           EEM  + I P +V++++LIDG  K G       M E + ++ C      +PDVVT+  LI
Sbjct: 293 EEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSC------IPDVVTFTSLI 346

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            GYC+ G     ++++D M    + P+
Sbjct: 347 DGYCRTGDIRLGLKVWDVMKARNVSPN 373



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D A KL  ++           YN ++       ++ EA+ LF++       PN+ TF I
Sbjct: 144 FDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNI 203

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
           LI   C+ G ++    +F+ M   G   +VVTY+ LI G  K+  +  A D+ +E+   N
Sbjct: 204 LIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRN 263

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           + SP++++Y+ +I G  K G +E A   F   + + + P VVT+ +LI G+ K G    A
Sbjct: 264 DCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAA 323

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +++ M     +PD +  ++L D
Sbjct: 324 EAMHEKMASYSCIPDVVTFTSLID 347



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 81/151 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            LK++  +  R + P+I TY+ II   C  NR+ EA  L  +L C  + P    +  +ID
Sbjct: 358 GLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVID 417

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G +D+A ++ ++M EK  + + VT++ LI G+     M  A D++++M     +P
Sbjct: 418 GFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAP 477

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
           + ++ S L+  L K G   EA +    A ++
Sbjct: 478 DNITISSLVACLLKAGKPSEAFHIVQTASED 508



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           ++  +    + D A +L  ++   + + +S  +  L++   K G++ +A  +F + L   
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              N  T++ LI G  +   ++  F+++  M      P++V+Y+ LI GLCK   ++ A 
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRA- 252

Query: 153 YAFHCAL------DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
               C L       N   PDV+TY  +I G+ K G+   A  L++ M+R+GI P  +  +
Sbjct: 253 ----CDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFN 308

Query: 207 TLAD 210
            L D
Sbjct: 309 VLID 312



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 62/125 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A  L  QL    + P    YN +I G+C    +DEA  +  ++   + +P+
Sbjct: 384 LCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPD 443

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFTILI   C +GRM +A  +F KML  G   + +T S L+    K+     AF + +
Sbjct: 444 KVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQ 503

Query: 122 EMCEN 126
              E+
Sbjct: 504 TASED 508



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +S     L+ +F + G+ D A  +  ++  +  + +   Y+ L++   K   +  A  ++
Sbjct: 127 DSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLF 186

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +E    +  PN  +++ILI GLC+ G +E+    F+       LPDVVTY  LI G CKA
Sbjct: 187 KENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKA 246

Query: 181 GRPTEAMQLYDSML-RNGIMPDGLLLSTL 208
                A  L   +  RN   PD +  +++
Sbjct: 247 NELDRACDLLKEVQSRNDCSPDVMTYTSI 275


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ AL    ++ + GL PD+ITYNT+I  YC    + +A  L +++    LK +
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T   ++   CK  R +DA  +     ++G   + V+Y  ++  YFK  N + A  +++
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  + P+I +Y+ LI GLC+   ++EA+   +  ++  L+PD  TY I+I  YCK G
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEG 573

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A + ++ M+ N   PD +  +TL
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTL 600



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 114/219 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            KE + + AL+L+ Q+ +R L P I TYNT+I G C + RL EA+    +L    L P+ 
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ I+I A+CKEG +++A    +KM+E   K +VVT + L++G      +  A  ++E 
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E     ++++Y+ LI  +CK G ++ AL+ F       L PD  TY +++    +AGR
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
             EA  +   +  +G +        L   +   +  +EH
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEH 718



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 112/204 (54%), Gaps = 4/204 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L      RG  PD ++Y T++  Y      + A++L++++   +L P+  T+  LI 
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIK 532

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  R+ +A    ++++EKG   +  TY+ +I  Y K  ++++AF  + +M EN+  P
Sbjct: 533 GLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP 592

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+ + L++GLC  G +++AL  F   ++     DV+TY  LI+  CK G    A+  +
Sbjct: 593 DVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFF 652

Query: 191 DSMLRNGIMPDG----LLLSTLAD 210
           D M   G+ PD     ++LS L++
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSE 676



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 96/176 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD++TYNT++          +A++L E++    +KP  +T  I++ + CKEG++++A   
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
             K+ E+G   +V+TY+ LID Y K+ N+  AF + +EM    +  +  + + ++  LCK
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
               E+A    H       +PD V+Y  ++  Y K   P  A++L+D M+   ++P
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIP 522



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 37/239 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL     +   GL PD +TYNT++  +C    L EA  L  ++    + P   T+  L+ 
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS- 129
           AF + G +  AT +   M   G + ++ TY+ L  G  ++  +  AF + +EM   + + 
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL 346

Query: 130 PNIVSYSILIDG-----------------------------------LCKRGLMEEALYA 154
           P++V+Y+ L+D                                    LCK G +EEAL  
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
                +  L PDV+TY  LI  YCKAG   +A  L D M+  G+  D   L+T+  YNL
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL-YNL 464



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 36/237 (15%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A+L +F  L +  L P+  T+N ++  +CS   L +A+     +    L P+++T+  L+
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +A C++G + +A  + ++M   G      TY+ L+  + +   +K A  V E M      
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310

Query: 130 PNIVSYSILIDGLCKRGLMEEAL--------------------------YAFHCA----- 158
           P++ +Y++L  GLC+ G ++EA                           + + C+     
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR 370

Query: 159 -----LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 D  + P +VT+ I+++  CK G+  EA+   + +   G+ PD +  +TL D
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM--KSAFDVYEEMCENNISPNIVSYSIL 138
           A ++ S    +G + ++   + ++    +S +   +++ DV+  + E  + PN  ++++L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           +   C +G + +AL          L PD VTY  L+  +C+ G   EA  L   M R+GI
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 199 MPDGLLLSTL 208
            P     +TL
Sbjct: 275 APTQPTYNTL 284


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +  R + P+ +TYNT+I G+ +  ++  A QL  ++    L PN +TF  LID   
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            EG   +A  MF  M  KG   + V+Y  L+DG  K+     A   Y  M  N +    +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +IDGLCK G ++EA+   +    + + PD+VTY+ LI G+CK GR   A ++   +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 194 LRNGIMPDGLLLSTL 208
            R G+ P+G++ STL
Sbjct: 465 YRVGLSPNGIIYSTL 479



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 41/245 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L  +++  G++PDI+TY+ +I G+C + R   A ++  ++  V L PN
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472

Query: 62  SI-----------------------------------TFTILIDAFCKEGRMDDATMMFS 86
            I                                   TF +L+ + CK G++ +A     
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   N V++ CLI+GY  S     AF V++EM +    P   +Y  L+ GLCK G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592

Query: 147 LMEEALYAFHCALDNHLLP---DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            + EA   F  +L  H +P   D V Y  L+   CK+G   +A+ L+  M++  I+PD  
Sbjct: 593 HLREA-EKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649

Query: 204 LLSTL 208
             ++L
Sbjct: 650 TYTSL 654



 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 105/199 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I E +   ALK+F  +  +GL P  ++Y  ++ G C     D A   + ++    +    
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+T +ID  CK G +D+A ++ ++M + G   ++VTYS LI+G+ K    K+A ++   
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +    +SPN + YS LI   C+ G ++EA+  +   +      D  T+ +L+   CKAG+
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA +    M  +GI+P+
Sbjct: 524 VAEAEEFMRCMTSDGILPN 542



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   GL P+ +T+N +I G+ S     EA+++F  +    L P+ +++ +L+D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    D A   + +M   G     +TY+ +IDG  K+  +  A  +  EM ++ I P
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS LI+G CK G  + A           L P+ + Y+ LI   C+ G   EA+++Y
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 191 DSMLRNGIMPDGLLLSTLA 209
           ++M+  G   D    + L 
Sbjct: 497 EAMILEGHTRDHFTFNVLV 515



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 3/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL  A K    L       D + YNT++   C    L +AV LF ++    + P+
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
           S T+T LI   C++G+   A ++F+K  E       N V Y+C +DG FK+   K+    
Sbjct: 648 SYTYTSLISGLCRKGKTVIA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 706

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E+M     +P+IV+ + +IDG  + G +E+         + +  P++ TY IL+ GY K
Sbjct: 707 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 766

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
               + +  LY S++ NGI+PD L   +L 
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLV 796



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 98/199 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A   + ++   G+    ITY  +I G C    LDEAV L  +++   + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+ FCK GR   A  +  ++   G   N + YS LI    +   +K A  +YE
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     + +  ++++L+  LCK G + EA     C   + +LP+ V++  LI GY  +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +A  ++D M + G  P
Sbjct: 558 EGLKAFSVFDEMTKVGHHP 576



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPN 61
           K  +L  A+ LFG++  R + PD  TY ++I G C   +   A+ LF K    +  + PN
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPN 683

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T  +D   K G+         +M   G   ++VT + +IDGY +   ++   D+  
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N  PN+ +Y+IL+ G  KR  +  +   +   + N +LPD +T   L+ G C++ 
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                +++  + +  G+  D
Sbjct: 804 MLEIGLKILKAFICRGVEVD 823



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  R + PD+ T+N +I   C+    +++  L +K+      P  +T+  ++  +CK+G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R   A  +   M  KG  A+V TY+ LI    +S  +   + +  +M +  I PN V+Y+
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI+G    G +  A    +  L   L P+ VT+  LI G+   G   EA++++  M   
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362

Query: 197 GIMPDGLLLSTLAD 210
           G+ P  +    L D
Sbjct: 363 GLTPSEVSYGVLLD 376



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 3/195 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +T  G+ P+ ++++ +I GY +     +A  +F+++T V   P   T+  L+   CK G 
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 78  MDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           + +A   F K L   P A + V Y+ L+    KS N+  A  ++ EM + +I P+  +Y+
Sbjct: 594 LREAEK-FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652

Query: 137 ILIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            LI GLC++G    A L+A       ++LP+ V Y   + G  KAG+    +   + M  
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712

Query: 196 NGIMPDGLLLSTLAD 210
            G  PD +  + + D
Sbjct: 713 LGHTPDIVTTNAMID 727



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 6/210 (2%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            L+  LK+      RG+E D  T+N +I   C+   ++ A  L + +T + +  +  T   
Sbjct: 805  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ++    +  R  ++ M+  +M ++G       Y  LI+G  +  ++K+AF V EEM  + 
Sbjct: 865  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 128  ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            I P  V+ S ++  L K G  +EA       L   L+P + ++  L+   CK G   EA+
Sbjct: 925  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 188  QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +L   M   G+  D      L  YN+  +G
Sbjct: 985  ELRVVMSNCGLKLD------LVSYNVLITG 1008



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 70/141 (49%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   + ILI  + +EG + D+  +F  M   G   +V T + ++    KS    S +   
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P++ +++ILI+ LC  G  E++ Y       +   P +VTY  ++  YCK 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR   A++L D M   G+  D
Sbjct: 242 GRFKAAIELLDHMKSKGVDAD 262



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 93/205 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  +  L+  +   G+ PD +T ++++ G C  N L+  +++ +   C  ++ +  
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF +LI   C  G ++ A  +   M   G   +  T   ++    ++   + +  V  EM
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISP    Y  LI+GLC+ G ++ A       + + + P  V  + ++R   K G+ 
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L   ML+  ++P     +TL
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTL 970



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 82/160 (51%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            +++ +G+ P+   Y  +I G C +  +  A  + E++   ++ P ++  + ++ A  K G
Sbjct: 884  EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943

Query: 77   RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            + D+AT++   ML+      + +++ L+    K+ N+  A ++   M    +  ++VSY+
Sbjct: 944  KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 137  ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +LI GLC +G M  A   +     +  L +  TY  LIRG
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%)

Query: 25   PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
            P  +  + ++       + DEA  L   +  ++L P   +FT L+   CK G + +A  +
Sbjct: 927  PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986

Query: 85   FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
               M   G K ++V+Y+ LI G     +M  AF++YEEM  +    N  +Y  LI GL  
Sbjct: 987  RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1046

Query: 145  R 145
            R
Sbjct: 1047 R 1047



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 14  LFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           +FG L  T R    +   Y+ +I  Y     + +++++F  +      P+  T   ++ +
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             K G          +ML++    +V T++ LI+      + + +  + ++M ++  +P 
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           IV+Y+ ++   CK+G  + A+          +  DV TY +LI   C++ R  +   L  
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M +  I P+ +  +TL +
Sbjct: 288 DMRKRMIHPNEVTYNTLIN 306



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 35/234 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K     A +    Q+ + G  PDI+T N +I GY  + ++++   L  ++      PN
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 62  SITFTILIDAFCKEGRMDDATMMF------------------------SKMLE------- 90
             T+ IL+  + K   +  + +++                        S MLE       
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813

Query: 91  ----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
               +G + +  T++ LI     +  +  AFD+ + M    IS +  +   ++  L +  
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +E+    H      + P+   Y  LI G C+ G    A  + + M+ + I P
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927



 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            D A  L   +    L P I ++ T++   C    + EA++L   ++   LK + +++ +L
Sbjct: 946  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            I   C +G M  A  ++ +M   G  AN  TY  LI G    +   S  D+
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +  R + P+ +TYNT+I G+ +  ++  A QL  ++    L PN +TF  LID   
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            EG   +A  MF  M  KG   + V+Y  L+DG  K+     A   Y  M  N +    +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +IDGLCK G ++EA+   +    + + PD+VTY+ LI G+CK GR   A ++   +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504

Query: 194 LRNGIMPDGLLLSTL 208
            R G+ P+G++ STL
Sbjct: 505 YRVGLSPNGIIYSTL 519



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 41/245 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L  +++  G++PDI+TY+ +I G+C + R   A ++  ++  V L PN
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512

Query: 62  SI-----------------------------------TFTILIDAFCKEGRMDDATMMFS 86
            I                                   TF +L+ + CK G++ +A     
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   N V++ CLI+GY  S     AF V++EM +    P   +Y  L+ GLCK G
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632

Query: 147 LMEEALYAFHCALDNHLLP---DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            + EA   F  +L  H +P   D V Y  L+   CK+G   +A+ L+  M++  I+PD  
Sbjct: 633 HLREA-EKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689

Query: 204 LLSTL 208
             ++L
Sbjct: 690 TYTSL 694



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 105/199 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I E +   ALK+F  +  +GL P  ++Y  ++ G C     D A   + ++    +    
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+T +ID  CK G +D+A ++ ++M + G   ++VTYS LI+G+ K    K+A ++   
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +    +SPN + YS LI   C+ G ++EA+  +   +      D  T+ +L+   CKAG+
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA +    M  +GI+P+
Sbjct: 564 VAEAEEFMRCMTSDGILPN 582



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   GL P+ +T+N +I G+ S     EA+++F  +    L P+ +++ +L+D
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    D A   + +M   G     +TY+ +IDG  K+  +  A  +  EM ++ I P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS LI+G CK G  + A           L P+ + Y+ LI   C+ G   EA+++Y
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536

Query: 191 DSMLRNGIMPDGLLLSTL 208
           ++M+  G   D    + L
Sbjct: 537 EAMILEGHTRDHFTFNVL 554



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL  A K    L       D + YNT++   C    L +AV LF ++    + P+
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
           S T+T LI   C++G+   A ++F+K  E       N V Y+C +DG FK+   K+    
Sbjct: 688 SYTYTSLISGLCRKGKTVIA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E+M     +P+IV+ + +IDG  + G +E+         + +  P++ TY IL+ GY K
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 806

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               + +  LY S++ NGI+PD L   +L
Sbjct: 807 RKDVSTSFLLYRSIILNGILPDKLTCHSL 835



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 98/199 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A   + ++   G+    ITY  +I G C    LDEAV L  +++   + P+
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+ FCK GR   A  +  ++   G   N + YS LI    +   +K A  +YE
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     + +  ++++L+  LCK G + EA     C   + +LP+ V++  LI GY  +G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +A  ++D M + G  P
Sbjct: 598 EGLKAFSVFDEMTKVGHHP 616



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPN 61
           K  +L  A+ LFG++  R + PD  TY ++I G C   +   A+ LF K    +  + PN
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPN 723

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T  +D   K G+         +M   G   ++VT + +IDGY +   ++   D+  
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N  PN+ +Y+IL+ G  KR  +  +   +   + N +LPD +T   L+ G C++ 
Sbjct: 784 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                +++  + +  G+  D
Sbjct: 844 MLEIGLKILKAFICRGVEVD 863



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  R + PD+ T+N +I   C+    +++  L +K+      P  +T+  ++  +CK+G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R   A  +   M  KG  A+V TY+ LI    +S  +   + +  +M +  I PN V+Y+
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI+G    G +  A    +  L   L P+ VT+  LI G+   G   EA++++  M   
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402

Query: 197 GIMPDGLLLSTLAD 210
           G+ P  +    L D
Sbjct: 403 GLTPSEVSYGVLLD 416



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 3/195 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +T  G+ P+ ++++ +I GY +     +A  +F+++T V   P   T+  L+   CK G 
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633

Query: 78  MDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           + +A   F K L   P A + V Y+ L+    KS N+  A  ++ EM + +I P+  +Y+
Sbjct: 634 LREAEK-FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692

Query: 137 ILIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            LI GLC++G    A L+A       ++LP+ V Y   + G  KAG+    +   + M  
Sbjct: 693 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752

Query: 196 NGIMPDGLLLSTLAD 210
            G  PD +  + + D
Sbjct: 753 LGHTPDIVTTNAMID 767



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 6/210 (2%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            L+  LK+      RG+E D  T+N +I   C+   ++ A  L + +T + +  +  T   
Sbjct: 845  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ++    +  R  ++ M+  +M ++G       Y  LI+G  +  ++K+AF V EEM  + 
Sbjct: 905  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964

Query: 128  ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            I P  V+ S ++  L K G  +EA       L   L+P + ++  L+   CK G   EA+
Sbjct: 965  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024

Query: 188  QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +L   M   G+  D      L  YN+  +G
Sbjct: 1025 ELRVVMSNCGLKLD------LVSYNVLITG 1048



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 70/141 (49%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   + ILI  + +EG + D+  +F  M   G   +V T + ++    KS    S +   
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P++ +++ILI+ LC  G  E++ Y       +   P +VTY  ++  YCK 
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR   A++L D M   G+  D
Sbjct: 282 GRFKAAIELLDHMKSKGVDAD 302



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 93/205 (45%)

Query: 4    KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
            K   +  +  L+  +   G+ PD +T ++++ G C  N L+  +++ +   C  ++ +  
Sbjct: 806  KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865

Query: 64   TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            TF +LI   C  G ++ A  +   M   G   +  T   ++    ++   + +  V  EM
Sbjct: 866  TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925

Query: 124  CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  ISP    Y  LI+GLC+ G ++ A       + + + P  V  + ++R   K G+ 
Sbjct: 926  SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985

Query: 184  TEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA  L   ML+  ++P     +TL
Sbjct: 986  DEATLLLRFMLKMKLVPTIASFTTL 1010



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 82/160 (51%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            +++ +G+ P+   Y  +I G C +  +  A  + E++   ++ P ++  + ++ A  K G
Sbjct: 924  EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983

Query: 77   RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            + D+AT++   ML+      + +++ L+    K+ N+  A ++   M    +  ++VSY+
Sbjct: 984  KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043

Query: 137  ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +LI GLC +G M  A   +     +  L +  TY  LIRG
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%)

Query: 25   PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
            P  +  + ++       + DEA  L   +  ++L P   +FT L+   CK G + +A  +
Sbjct: 967  PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026

Query: 85   FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
               M   G K ++V+Y+ LI G     +M  AF++YEEM  +    N  +Y  LI GL  
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1086

Query: 145  R 145
            R
Sbjct: 1087 R 1087



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 14  LFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           +FG L  T R    +   Y+ +I  Y     + +++++F  +      P+  T   ++ +
Sbjct: 148 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 207

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             K G          +ML++    +V T++ LI+      + + +  + ++M ++  +P 
Sbjct: 208 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 267

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           IV+Y+ ++   CK+G  + A+          +  DV TY +LI   C++ R  +   L  
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M +  I P+ +  +TL +
Sbjct: 328 DMRKRMIHPNEVTYNTLIN 346



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 35/234 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K     A +    Q+ + G  PDI+T N +I GY  + ++++   L  ++      PN
Sbjct: 734 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 793

Query: 62  SITFTILIDAFCKEGRMDDATMMF------------------------SKMLE------- 90
             T+ IL+  + K   +  + +++                        S MLE       
Sbjct: 794 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 853

Query: 91  ----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
               +G + +  T++ LI     +  +  AFD+ + M    IS +  +   ++  L +  
Sbjct: 854 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 913

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +E+    H      + P+   Y  LI G C+ G    A  + + M+ + I P
Sbjct: 914 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967



 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            D A  L   +    L P I ++ T++   C    + EA++L   ++   LK + +++ +L
Sbjct: 986  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            I   C +G M  A  ++ +M   G  AN  TY  LI G    +   S  D+
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1096


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 115/202 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++   L+ A+  F ++  +G  P +++YNT+I G C   R  +A    +++     KP+
Sbjct: 474 FVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPD 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+++L+D  C+  ++D A  ++ ++L KG + +V  ++ L+ G   +  ++ A  +Y 
Sbjct: 534 MITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYS 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++N  PN+V+++ L+DGL K    E A   + C   N   PD+++Y I ++G C  G
Sbjct: 594 NMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCG 653

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
           R ++ + L+D  L+NGI+P  +
Sbjct: 654 RISDGIALFDDALKNGILPTSI 675



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 101/180 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K      A     ++ ++  +PD+ITY+ ++ G C   ++D A+ L+ ++    L+P+
Sbjct: 509 LCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPD 568

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                IL+   C  G+++DA +++S M +     N+VT++ L+DG +K++  + A  ++ 
Sbjct: 569 VTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWA 628

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +N   P+I+SY+I + GLC  G + + +  F  AL N +LP  +T+ IL+R   K G
Sbjct: 629 CMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 118/203 (58%), Gaps = 6/203 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL---TCVQL 58
           ++K   L +AL++F ++ +RGL PD++ YN +I G+       +  +++E+L   +CV  
Sbjct: 194 MVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVY- 252

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            PN +T+ ++I+  CK GR D++  M+ +M +   + ++ TYS LI G     N+  A +
Sbjct: 253 -PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVE 311

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           VY+EM + ++  ++V+Y+ L++G C+ G ++E+ +     +      +VV+Y I IRG  
Sbjct: 312 VYKEMVKRSVVVDVVTYNALLNGFCRAGKIKES-FELWVMMGKENCHNVVSYNIFIRGLF 370

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
           +  +  EA+ +++ + R G   D
Sbjct: 371 ENRKVEEAISVWELLRRRGSGAD 393



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 97/176 (55%), Gaps = 1/176 (0%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G +P I +YN ++  +   N L++A         V + PN  T+ ILI    K+ +  +A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M  K  K +V +Y  +I+G  KS ++ SA +V++EM E  + P+++ Y+I+IDG
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 142 LCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
             KRG   +    +   +    + P+VVTY ++I G CK GR  E++++++ M +N
Sbjct: 229 FFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKN 284



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 104/186 (55%), Gaps = 1/186 (0%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+++TYN +I G C + R DE+++++E++   + + +  T++ LI   C  G +D A  +
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           + +M+++    +VVTY+ L++G+ ++  +K +F+++  M + N   N+VSY+I I GL +
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFE 371

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
              +EEA+  +          D  TY +LI G CK G   +A+++       G   D   
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431

Query: 205 LSTLAD 210
            S++ D
Sbjct: 432 YSSIVD 437



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 1/189 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A          G+ P++ TYN +I       +  EA  L + +    LKP+  ++  
Sbjct: 130 LEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGT 189

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I+   K G +  A  +F +M E+G   +V+ Y+ +IDG+FK  +     +++E + + +
Sbjct: 190 VINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGS 249

Query: 128 -ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+V+Y+++I+GLCK G  +E+L  +     N    D+ TY+ LI G C  G    A
Sbjct: 250 CVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGA 309

Query: 187 MQLYDSMLR 195
           +++Y  M++
Sbjct: 310 VEVYKEMVK 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 106/196 (54%), Gaps = 1/196 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D +L+++ ++     E D+ TY+++ICG C +  +D AV++++++    +  +
Sbjct: 265 LCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVD 324

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L++ FC+ G++ ++  ++  M+ K    NVV+Y+  I G F+++ ++ A  V+E
Sbjct: 325 VVTYNALLNGFCRAGKIKESFELWV-MMGKENCHNVVSYNIFIRGLFENRKVEEAISVWE 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +       +  +Y +LI GLCK G + +AL     A D     D   Y+ ++ G  K G
Sbjct: 384 LLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQG 443

Query: 182 RPTEAMQLYDSMLRNG 197
           R  EA+ +   M + G
Sbjct: 444 RVDEALGIVHQMDKYG 459



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 116/222 (52%), Gaps = 1/222 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   ++ A+ ++  L  RG   D  TY  +I G C    L++A+++ ++      K +
Sbjct: 369 LFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLD 428

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  ++ ++D   K+GR+D+A  +  +M + G + +    + LI+G+ ++  ++ A   + 
Sbjct: 429 AFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFR 488

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM     SP +VSY+ LI+GLCK     +A       L+    PD++TY++L+ G C+  
Sbjct: 489 EMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGK 548

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +   A+ L+  +L  G+ PD + +  +  + L S+G  E  +
Sbjct: 549 KIDMALNLWRQVLVKGLEPD-VTMHNILMHGLCSAGKIEDAL 589



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 3/193 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+     A  L   +  + L+PD+ +Y T+I G      L  A+++F+++    L P+ 
Sbjct: 160 VKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDV 219

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + + I+ID F K G       ++ +++ KG     NVVTY+ +I+G  K      + +++
Sbjct: 220 MCYNIMIDGFFKRGDYVQGKEIWERLV-KGSCVYPNVVTYNVMINGLCKMGRFDESLEMW 278

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           E M +N    ++ +YS LI GLC  G ++ A+  +   +   ++ DVVTY  L+ G+C+A
Sbjct: 279 ERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRA 338

Query: 181 GRPTEAMQLYDSM 193
           G+  E+ +L+  M
Sbjct: 339 GKIKESFELWVMM 351



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 78/142 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL L+ Q+  +GLEPD+  +N ++ G CS  ++++A+ L+  +      PN +T   
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D   K    + A+++++ M + G + ++++Y+  + G      +     ++++  +N 
Sbjct: 610 LMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNG 669

Query: 128 ISPNIVSYSILIDGLCKRGLME 149
           I P  +++ IL+  + K G ++
Sbjct: 670 ILPTSITWYILVRAVLKLGPLD 691



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSA--FDV 119
           +  T+L  A+ K    ++A   F KM E  G K  + +Y+ L++ + ++  ++ A  F  
Sbjct: 80  VVLTVL-KAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLA 138

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           Y E     I PN+ +Y+ILI    K+    EA           L PDV +Y  +I G  K
Sbjct: 139 YFETV--GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVK 196

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +G    A++++D M   G++PD +  + + D
Sbjct: 197 SGDLVSALEVFDEMFERGLVPDVMCYNIMID 227



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +EC + + +  +  +   G +PDII+YN  + G CS  R+ + + LF+      + P SI
Sbjct: 618 RECEMASVI--WACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSI 675

Query: 64  TFTILIDAFCKEGRMD 79
           T+ IL+ A  K G +D
Sbjct: 676 TWYILVRAVLKLGPLD 691


>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 115/195 (58%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +L  AL +F Q+ + G EPD +TY T+I  +     LD A+ ++E++  V L P++ T++
Sbjct: 436 YLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYS 495

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+   K G +  A  +F +M+++G   N+VTY+ LI    K++N ++A  +Y +M   
Sbjct: 496 VMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNA 555

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+YSI+++ L   G +EEA   F     N+ +PD   Y +LI  + KAG   +A
Sbjct: 556 GFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKA 615

Query: 187 MQLYDSMLRNGIMPD 201
            + Y +MLR G++P+
Sbjct: 616 WEWYHAMLRAGLLPN 630



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 94/193 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A+ ++ ++ + GL PD  TY+ +I        L  A +LF ++      PN +T+ I
Sbjct: 472 LDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNI 531

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    K      A  ++  M   G K + VTYS +++       ++ A  V+ EM +NN
Sbjct: 532 LIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNN 591

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P+   Y +LID   K G +E+A   +H  L   LLP+V T   L+  + +  R  +A 
Sbjct: 592 WVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAY 651

Query: 188 QLYDSMLRNGIMP 200
            L  +M+  G+ P
Sbjct: 652 NLLQNMVTLGLNP 664



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 90/182 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  +L AA +LF ++ D+G  P+I+TYN +I           A++L+  +     KP+
Sbjct: 501 LGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPD 560

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++I+++     G +++A  +F +M +     +   Y  LID + K+ N++ A++ Y 
Sbjct: 561 KVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYH 620

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + PN+ + + L+    +   + +A       +   L P + TY +L+    +A 
Sbjct: 621 AMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQ 680

Query: 182 RP 183
            P
Sbjct: 681 SP 682



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 71/138 (51%)

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T ++    +         +  +M++ G + NVVTY+ LI  Y ++  +  A +V+ +M
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM 447

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            E    P+ V+Y  LID   K G ++ A+  +    +  L PD  TY+++I    K+G  
Sbjct: 448 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 507

Query: 184 TEAMQLYDSMLRNGIMPD 201
           + A +L+  M+  G +P+
Sbjct: 508 SAAHRLFCEMVDQGCVPN 525



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 55/110 (50%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ ++    +++   +   + E+M ++   PN+V+Y+ LI    +   + EAL  F+  
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM 447

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            +    PD VTY  LI  + KAG    AM +Y+ M   G+ PD    S +
Sbjct: 448 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVM 497



 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 4/167 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +++ A + +  +   GL P++ T N+++  +  ++RL +A  L + +  + L P+  
Sbjct: 608 KAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQ 667

Query: 64  TFTILIDAFCKEGRMD-DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           T+T+L+   C E +   D       M   G  A+    S    G    QN++     + +
Sbjct: 668 TYTLLLSC-CTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGP-DGQNVRDHVSKFLD 725

Query: 123 MCENNISPNIVSY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
           +  +            ++D L K GL EEA   +  A   ++ PD +
Sbjct: 726 LMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAI 772


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 114/202 (56%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           + +K+ +LD A +L+ ++    ++P+ +TYN+II G C   RL +A + F+ +      P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+  LI  FCK   +D+   +F +M  +G  A++ TY+ LI GY +   ++ A D++
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    ++P+I+++ IL+ GLC  G +E AL  F    ++     +V Y I+I G CKA
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434

Query: 181 GRPTEAMQLYDSMLRNGIMPDG 202
            +  +A +L+  +   G+ PD 
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDA 456



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ AL+L  ++  +GL  D++TYNT++ G C   R  +A ++   +    + P+
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TFT LID F K+G +D+A  ++ +M++     N VTY+ +I+G      +  A   ++
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PN+V+Y+ LI G CK  +++E +  F          D+ TY  LI GYC+ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +   A+ ++  M+   + PD
Sbjct: 366 KLRVALDIFCWMVSRRVTPD 385



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 105/198 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L   +   G EP+++ YNT+I G C    L+ A++L  ++    L  + +T+  L+ 
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  DA  M   M+++    +VVT++ LID + K  N+  A ++Y+EM ++++ P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y+ +I+GLC  G + +A   F         P+VVTY  LI G+CK     E M+L+
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M   G   D    +TL
Sbjct: 340 QRMSCEGFNADIFTYNTL 357



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +     + A  LF ++      P I+ +  ++    +L R +  +   +K+    +  +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             +FTILI  FC+  R+  A  +  KM++ G + ++VT+  L+ G+     +  AF +  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M ++   PN+V Y+ LIDGLCK G +  AL   +      L  DVVTY  L+ G C +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           R ++A ++   M++  I PD +  + L D  ++     E
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 102/189 (53%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G+  D+ ++  +I  +C  +RL  A+ +  K+  +  +P+ +TF  L+  FC   R+ DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M++ G + NVV Y+ LIDG  K+  +  A ++  EM +  +  ++V+Y+ L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           LC  G   +A       +   + PDVVT+  LI  + K G   EA +LY  M+++ + P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 202 GLLLSTLAD 210
            +  +++ +
Sbjct: 281 NVTYNSIIN 289



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 80/144 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  +KLF +++  G   DI TYNT+I GYC + +L  A+ +F  +   ++ P+ IT  I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+   C  G ++ A + F  M E      +V Y+ +I G  K+  ++ A++++  +    
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA 151
           + P+  +Y+I+I GLCK G   EA
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREA 475



 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%)

Query: 36  GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
           G+    R ++A  LF ++   Q  P+ + FT L+ A     R +       KM   G   
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           ++ +++ LI  + +   +  A  V  +M +    P+IV++  L+ G C    + +A    
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              + +   P+VV Y  LI G CK G    A++L + M + G+  D +  +TL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL +F  +  R + PDIIT+  ++ G C    ++ A+  F+ +   +     + + I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I   CK  +++ A  +F ++  +G K +  TY+ +I G  K+   + A ++   M E  
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486

Query: 128 I 128
           I
Sbjct: 487 I 487


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 120/207 (57%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +FG +  RGLEPD+++ N ++ G+C    + EA ++F+++      PN I+++ LI+
Sbjct: 286 ARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLIN 345

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +CK   +D+A  + ++M ++    + VTY+CL+DG  KS  +   +D+ E M  +  +P
Sbjct: 346 GYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAP 405

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y++L+D   KR  +++AL  F   +D  + P++ TY ILI G CK GR   A +++
Sbjct: 406 DLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIF 465

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
             +   G  P+      +  YN+  +G
Sbjct: 466 QLLSVKGCRPN------IRTYNIMING 486



 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 119/210 (56%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKP 60
           L KE  +  A  L  ++  +G+  D+ TYN++I G+C   +   AV+L  ++   + ++P
Sbjct: 206 LCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRP 265

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  TF IL+DA CK G + +A  +F  M+++G + +VV+ + L++G+     M  A +V+
Sbjct: 266 DVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVF 325

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           + M E    PN++SYS LI+G CK  +++EAL         +L+PD VTY  L+ G  K+
Sbjct: 326 DRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKS 385

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           GR      L ++M  +G  PD +  + L D
Sbjct: 386 GRVLYEWDLVEAMRASGQAPDLITYNVLLD 415



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 115/201 (57%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L+     +G   D + Y T+I G C + +  +A++L  K+    ++PN I + +++D
Sbjct: 145 ALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVD 204

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENNIS 129
             CKEG + +A  + S+M+ KG   +V TY+ LI G+  +   + A  +  EM  + ++ 
Sbjct: 205 GLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR 264

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++ +++IL+D LCK G++ EA   F   +   L PDVV+   L+ G+C  G  +EA ++
Sbjct: 265 PDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEV 324

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
           +D M+  G +P+ +  STL +
Sbjct: 325 FDRMVERGKLPNVISYSTLIN 345



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 112/202 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A ++F ++ +RG  P++I+Y+T+I GYC +  +DEA++L  ++    L P+++T+  
Sbjct: 318 MSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNC 377

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D   K GR+     +   M   G   +++TY+ L+D Y K + +  A  +++ + +  
Sbjct: 378 LLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISPNI +Y+ILIDGLCK G M+ A   F         P++ TY I+I G  + G   EA 
Sbjct: 438 ISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAE 497

Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
            L   M+ +G  P+ +    L 
Sbjct: 498 ALLLEMVDDGFPPNAVTFDPLV 519



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 93/169 (55%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL+L  ++  R L PD +TYN ++ G     R+     L E +      P+ IT+ +
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D + K   +D A  +F  +++ G   N+ TY+ LIDG  K   MK+A ++++ +    
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             PNI +Y+I+I+GL + GL++EA       +D+   P+ VT+  L+R 
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 2/211 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ++K  H    + L   L  +G  +P ++T +  I     L ++  A  +  K+       
Sbjct: 65  IMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGV 124

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T T L+   C +GR  +A  ++   + KG   + V Y  LI+G  K    + A ++ 
Sbjct: 125 DPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELL 184

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            +M +  + PN++ Y++++DGLCK GL+ EA       +   +  DV TY  LI G+C A
Sbjct: 185 RKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGA 244

Query: 181 GRPTEAMQLYDSM-LRNGIMPDGLLLSTLAD 210
           G+   A++L + M ++  + PD    + L D
Sbjct: 245 GQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 68/124 (54%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  PD+ITYN ++  Y     LD+A+ LF+ +    + PN  T+ ILID  CK GRM  A
Sbjct: 402 GQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAA 461

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +F  +  KG + N+ TY+ +I+G  +   +  A  +  EM ++   PN V++  L+  
Sbjct: 462 KEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521

Query: 142 LCKR 145
           L ++
Sbjct: 522 LLEK 525



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 36/173 (20%)

Query: 74  KEGRMDDATMMFSKMLE-----------------------------------KG-PKANV 97
           K    DDA   F +ML                                    KG PK ++
Sbjct: 32  KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSL 91

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           VT S  I+       M  AF V  ++ +     +  + + L+ GLC +G   EAL  +  
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+      D V Y  LI G CK G+  +A++L   M + G+ P+ ++ + + D
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVD 204


>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
          Length = 332

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ G+CS  +  EA+   +K+    ++P+
Sbjct: 57  LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 116

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G K ++ TY  L+ GY     +     + +
Sbjct: 117 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 176

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SIL+    K+  +EEA+  F       L P+ VTY  +I   CK+G
Sbjct: 177 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 236

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ PD ++ ++L
Sbjct: 237 RVEDAMLYFEQMIDEGLRPDSIVYNSL 263



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 111/195 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+PDI TY T++ GY +   L E   L + +    + PN   F+IL+ 
Sbjct: 136 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 195

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++++A ++FSKM ++G   N VTY  +ID   KS  ++ A   +E+M +  + P
Sbjct: 196 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 255

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+ LI  LC     E+A   F   LD  +    + +  +I  +CK GR  E+++L+
Sbjct: 256 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLF 315

Query: 191 DSMLRNGIMPDGLLL 205
           D M+R G+ PD + L
Sbjct: 316 DLMVRIGVKPDIITL 330



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 99/185 (53%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+++Y+T+I G+     LD+    + ++   ++ PN +T+  +I A CK   +D A  +
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            + M++ G   + +TY+ ++ G+  S   K A    ++M  + + P++V+Y+ L+D LCK
Sbjct: 70  LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G   EA   F       L PD+ TY  L++GY   G   E   L D M+RNGI P+  +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189

Query: 205 LSTLA 209
            S L 
Sbjct: 190 FSILV 194



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 72/116 (62%)

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           +VV+YS +I+G+FK  ++   +  Y EM +  ISPN+V+Y+ +I  LCK   +++A+   
Sbjct: 11  DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
              + + ++PD +TY  ++ G+C +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 71  TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 126



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 59/99 (59%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL PD I YN++I   C  ++ ++A +LF ++    +  
Sbjct: 231 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 290

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++T
Sbjct: 291 STIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           L   +  R + P+ +TYNT+I G+ +  ++  A QL  ++    L PN +TF  LID   
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
            EG   +A  MF  M  KG   + V+Y  L+DG  K+     A   Y  M  N +    +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+ +IDGLCK G ++EA+   +    + + PD+VTY+ LI G+CK GR   A ++   +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 194 LRNGIMPDGLLLSTL 208
            R G+ P+G++ STL
Sbjct: 465 YRVGLSPNGIIYSTL 479



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 41/245 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L  +++  G++PDI+TY+ +I G+C + R   A ++  ++  V L PN
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472

Query: 62  SI-----------------------------------TFTILIDAFCKEGRMDDATMMFS 86
            I                                   TF +L+ + CK G++ +A     
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
            M   G   N V++ CLI+GY  S     AF V++EM +    P   +Y  L+ GLCK G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592

Query: 147 LMEEALYAFHCALDNHLLP---DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            + EA   F  +L  H +P   D V Y  L+   CK+G   +A+ L+  M++  I+PD  
Sbjct: 593 HLREA-EKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649

Query: 204 LLSTL 208
             ++L
Sbjct: 650 TYTSL 654



 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 105/199 (52%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I E +   ALK+F  +  +GL P  ++Y  ++ G C     D A   + ++    +    
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+T +ID  CK G +D+A ++ ++M + G   ++VTYS LI+G+ K    K+A ++   
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +    +SPN + YS LI   C+ G ++EA+  +   +      D  T+ +L+   CKAG+
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 183 PTEAMQLYDSMLRNGIMPD 201
             EA +    M  +GI+P+
Sbjct: 524 VAEAEEFMRCMTSDGILPN 542



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L  ++   GL P+ +T+N +I G+ S     EA+++F  +    L P+ +++ +L+D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK    D A   + +M   G     +TY+ +IDG  K+  +  A  +  EM ++ I P
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +IV+YS LI+G CK G  + A           L P+ + Y+ LI   C+ G   EA+++Y
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496

Query: 191 DSMLRNGIMPDGLLLSTLA 209
           ++M+  G   D    + L 
Sbjct: 497 EAMILEGHTRDHFTFNVLV 515



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 3/210 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  HL  A K    L       D + YNT++   C    L +AV LF ++    + P+
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
           S T+T LI   C++G+   A ++F+K  E       N V Y+C +DG FK+   K+    
Sbjct: 648 SYTYTSLISGLCRKGKTVIA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 706

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            E+M     +P+IV+ + +IDG  + G +E+         + +  P++ TY IL+ GY K
Sbjct: 707 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 766

Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
               + +  LY S++ NGI+PD L   +L 
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLV 796



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 98/199 (49%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A   + ++   G+    ITY  +I G C    LDEAV L  +++   + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LI+ FCK GR   A  +  ++   G   N + YS LI    +   +K A  +YE
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M     + +  ++++L+  LCK G + EA     C   + +LP+ V++  LI GY  +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 182 RPTEAMQLYDSMLRNGIMP 200
              +A  ++D M + G  P
Sbjct: 558 EGLKAFSVFDEMTKVGHHP 576



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPN 61
           K  +L  A+ LFG++  R + PD  TY ++I G C   +   A+ LF K    +  + PN
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPN 683

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +T  +D   K G+         +M   G   ++VT + +IDGY +   ++   D+  
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   N  PN+ +Y+IL+ G  KR  +  +   +   + N +LPD +T   L+ G C++ 
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
                +++  + +  G+  D
Sbjct: 804 MLEIGLKILKAFICRGVEVD 823



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  R + PD+ T+N +I   C+    +++  L +K+      P  +T+  ++  +CK+G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           R   A  +   M  KG  A+V TY+ LI    +S  +   + +  +M +  I PN V+Y+
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LI+G    G +  A    +  L   L P+ VT+  LI G+   G   EA++++  M   
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362

Query: 197 GIMPDGLLLSTLAD 210
           G+ P  +    L D
Sbjct: 363 GLTPSEVSYGVLLD 376



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 3/195 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           +T  G+ P+ ++++ +I GY +     +A  +F+++T V   P   T+  L+   CK G 
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 78  MDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           + +A   F K L   P A + V Y+ L+    KS N+  A  ++ EM + +I P+  +Y+
Sbjct: 594 LREAEK-FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652

Query: 137 ILIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
            LI GLC++G    A L+A       ++LP+ V Y   + G  KAG+    +   + M  
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712

Query: 196 NGIMPDGLLLSTLAD 210
            G  PD +  + + D
Sbjct: 713 LGHTPDIVTTNAMID 727



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 6/210 (2%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            L+  LK+      RG+E D  T+N +I   C+   ++ A  L + +T + +  +  T   
Sbjct: 805  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ++    +  R  ++ M+  +M ++G       Y  LI+G  +  ++K+AF V EEM  + 
Sbjct: 865  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 128  ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            I P  V+ S ++  L K G  +EA       L   L+P + ++  L+   CK G   EA+
Sbjct: 925  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 188  QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            +L   M   G+  D      L  YN+  +G
Sbjct: 985  ELRVVMSNCGLKLD------LVSYNVLITG 1008



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 70/141 (49%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   + ILI  + +EG + D+  +F  M   G   +V T + ++    KS    S +   
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           +EM +  I P++ +++ILI+ LC  G  E++ Y       +   P +VTY  ++  YCK 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR   A++L D M   G+  D
Sbjct: 242 GRFKAAIELLDHMKSKGVDAD 262



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 93/205 (45%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  +  L+  +   G+ PD +T ++++ G C  N L+  +++ +   C  ++ +  
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF +LI   C  G ++ A  +   M   G   +  T   ++    ++   + +  V  EM
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  ISP    Y  LI+GLC+ G ++ A       + + + P  V  + ++R   K G+ 
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
            EA  L   ML+  ++P     +TL
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTL 970



 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 82/160 (51%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            +++ +G+ P+   Y  +I G C +  +  A  + E++   ++ P ++  + ++ A  K G
Sbjct: 884  EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943

Query: 77   RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            + D+AT++   ML+      + +++ L+    K+ N+  A ++   M    +  ++VSY+
Sbjct: 944  KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 137  ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            +LI GLC +G M  A   +     +  L +  TY  LIRG
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%)

Query: 25   PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
            P  +  + ++       + DEA  L   +  ++L P   +FT L+   CK G + +A  +
Sbjct: 927  PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986

Query: 85   FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
               M   G K ++V+Y+ LI G     +M  AF++YEEM  +    N  +Y  LI GL  
Sbjct: 987  RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1046

Query: 145  R 145
            R
Sbjct: 1047 R 1047



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 14  LFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           +FG L  T R    +   Y+ +I  Y     + +++++F  +      P+  T   ++ +
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
             K G          +ML++    +V T++ LI+      + + +  + ++M ++  +P 
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           IV+Y+ ++   CK+G  + A+          +  DV TY +LI   C++ R  +   L  
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287

Query: 192 SMLRNGIMPDGLLLSTLAD 210
            M +  I P+ +  +TL +
Sbjct: 288 DMRKRMIHPNEVTYNTLIN 306



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 35/234 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K     A +    Q+ + G  PDI+T N +I GY  + ++++   L  ++      PN
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753

Query: 62  SITFTILIDAFCKEGRMDDATMMF------------------------SKMLE------- 90
             T+ IL+  + K   +  + +++                        S MLE       
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813

Query: 91  ----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
               +G + +  T++ LI     +  +  AFD+ + M    IS +  +   ++  L +  
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             +E+    H      + P+   Y  LI G C+ G    A  + + M+ + I P
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927



 Score = 43.9 bits (102), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            D A  L   +    L P I ++ T++   C    + EA++L   ++   LK + +++ +L
Sbjct: 946  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
            I   C +G M  A  ++ +M   G  AN  TY  LI G    +   S  D+
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 1/210 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD+A ++  Q+T+RG  PD++TY+++I G+C    ++ A+ L + +  +  +PN
Sbjct: 192 LCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPN 251

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  L+ A  + G +  A  M  +M  +G   +VV+Y+  IDG  K++ +K A  V++
Sbjct: 252 MVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFD 311

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E   +PN  SYS+L++ LCK+  +++A+     A + + + D++ Y +L+ G CK G
Sbjct: 312 RMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGG 371

Query: 182 RPTEAMQLYDSMLRNGI-MPDGLLLSTLAD 210
           R  EA  L+  +L   I  PD    + + D
Sbjct: 372 RFDEACALFSKVLDEKICEPDVFFYNVMLD 401



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 32/239 (13%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L+ A +L G++ + G  PD   YN +I GY       +A +   ++      P 
Sbjct: 20  LCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPT 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T ++D  CK GR  DA  +  +M +KG   N+ TY+ +++G  + + +  A  + E
Sbjct: 80  VVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLE 139

Query: 122 EMCENN--------------------------------ISPNIVSYSILIDGLCKRGLME 149
           EM                                    ++P++VSY+ +I+GLCK G ++
Sbjct: 140 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLD 199

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            A        +    PDVVTY+ LI G+CK G    AM L DSML+ G  P+ +  ++L
Sbjct: 200 SASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 258



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A  +F ++ +RG  P+  +Y+ ++   C    LD+A+ L E+        +
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + +T+L+D  CK GR D+A  +FSK+L EK  + +V  Y+ ++D + K + +  A  ++
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 416

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M E N   N+V+++IL+ GLC    + +A       +D   +PD VTY  L+   CK 
Sbjct: 417 KQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G+   A++L++  ++ G +PD +  S L
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSAL 503



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  LD A K+  ++  RG  PD++TYN+ I G C  +R+DEA +   ++    + P+
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPD 181

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---- 117
            +++T +I+  CK G +D A+ M  +M  +G   +VVTYS LIDG+ K   ++ A     
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 118 -------------------------------DVYEEMCENNISPNIVSYSILIDGLCKRG 146
                                          D+  EM     +P++VSY+  IDGLCK  
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            +++A   F   ++    P+  +Y++L+   CK     +A+ L +       + D LL +
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYT 361

Query: 207 TLADYNLQSSGSQEHC 222
            L D   +     E C
Sbjct: 362 VLLDGLCKGGRFDEAC 377



 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 111/205 (54%), Gaps = 2/205 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H+  A  +  ++  RG  PD+++YN  I G C   R+ +A  +F+++      PN+ +++
Sbjct: 267 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 326

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L++  CK+  +DDA  +  +  EK    +++ Y+ L+DG  K      A  ++ ++ + 
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386

Query: 127 NI-SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            I  P++  Y++++D  CKR  +++AL      L+ +   +VVT+ IL+ G C   R ++
Sbjct: 387 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSD 445

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A  +  +M+  G +PD +   TL D
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVD 470



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D+  +PD  T+  ++ G C  N+L++A QL  ++  +   P+   +  LI  + K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
              A    ++M++      VVTY+ ++DG  K+   K A  + +EM +   SPNI +Y++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           +++GLC+   ++EA             PDVVTY   I+G CK  R  EA +    + R  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 198 IMPDGLLLSTL 208
           + PD +  +T+
Sbjct: 178 VTPDVVSYTTV 188



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKL---TCVQ 57
           L K    D A  LF ++ D  + EPD+  YN ++  +C   ++D+A+Q+ +++    C  
Sbjct: 367 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC- 425

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
              N +T+ IL+   C + R+ DA  M   M+++G   + VTY  L+D   K     +A 
Sbjct: 426 ---NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 482

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           +++EE  +    P++V+YS LI GL    + EEA   F          DV  +  +I GY
Sbjct: 483 ELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMILGY 535

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDG 202
            + G     ++L+  ++ + + P+ 
Sbjct: 536 AENGSGDLGLKLFVELIESDVEPNA 560



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 8/177 (4%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D G  PD +TY T++   C   +   A++LFE+       P+ +T++ LI     E  
Sbjct: 453 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 512

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
            ++A ++F+K+       +V  ++ +I GY ++ +      ++ E+ E+++ PN  ++  
Sbjct: 513 AEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGK 565

Query: 138 LIDG-LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            I G L K   + +A   F  A+     PD+     LI  + K G   EA +++ SM
Sbjct: 566 EISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICG-YCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           D  LKLF +L +  +EP+  T+   I G       L +A  LF++       P+      
Sbjct: 542 DLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANT 601

Query: 68  LIDAFCKEGRMDDATMMFSKM 88
           LID F K G +++A  +F  M
Sbjct: 602 LIDVFAKCGDLEEARRIFYSM 622


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P+++T+N+++ GYC +  ++EA  L + +  + ++PN
Sbjct: 462 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 521

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D +CK GR+DDA  +F  ML KG K   V YS ++ G F+++   +A  ++ 
Sbjct: 522 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 581

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +Y +++ GLC+    +EA          ++  D++T+ I+I    K G
Sbjct: 582 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 641

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+D++   G++P+
Sbjct: 642 RRQEAKELFDAISTYGLVPN 661



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 36/226 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT--- 64
           +D A+ +F  + ++G+ PD +T+ T+I   C + RLD+A+  F  +  + + P+      
Sbjct: 362 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 421

Query: 65  ---------------------------------FTILIDAFCKEGRMDDATMMFSKMLEK 91
                                            F+ +I+  CKEGR+ +   +   M++ 
Sbjct: 422 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 481

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G + NVVT++ L++GY    NM+ AF + + M    I PN   Y  L+DG CK G +++A
Sbjct: 482 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 541

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           L  F   L   + P  V Y+I++ G  +A R T A +++  M+ +G
Sbjct: 542 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 587



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 37/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  ++ D G+ PD+ TY+ II G C    +D+A ++ E++     +PN
Sbjct: 179 LCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPN 238

Query: 62  SITFTILIDAFC-----------------------------------KEGRMDDATMMFS 86
           SIT+  LI  +                                    K GR ++A  +F 
Sbjct: 239 SITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFD 298

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQN--MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            M+ KGPK ++++YS ++ GY  + +  +    +++  M    I+PN   ++ILI+   +
Sbjct: 299 SMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYAR 358

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            G+M++A+  F    +  ++PD VT+A +I   C+ GR  +A+  ++ M+  G+ P
Sbjct: 359 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 414



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G+ P+   +N +I  Y     +D+A+ +FE +    + P+++TF  +I + C
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   Y CLI G      +  A ++  EM   +I P  V
Sbjct: 393 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            Y S +I+ LCK G + E        +     P+VVT+  L+ GYC  G   EA  L D+
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   GI P+  +  TL D
Sbjct: 513 MASIGIEPNCYIYGTLVD 530



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 37/239 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+ + G  P+ ITYN++I GY      +E+V++F++++   + P 
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN--------- 112
                  I A  K GR ++A  +F  M+ KGPK ++++YS ++ GY  + +         
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333

Query: 113 ----------------------------MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                                       M  A  ++E+M    + P+ V+++ +I  LC+
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G +++AL+ F+  +D  + P    Y  LI+G C  G   +A +L   M+   I P G+
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+  +D A  LF ++ ++G+ P I+  N+II   C +  +D+A  + +K+    + P+
Sbjct: 144 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 203

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++++ID  CK   MD A  +  +M+E G + N +TY+ LI GY  S     +  V++
Sbjct: 204 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----PDVVTYAILIRGY 177
           +M    + P + + +  I  L K G   EA     C  D+ +L    PD+++Y+ ++ GY
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEA----KCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 178 CKAGRP--TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A      +   +++ ML  GI P+  + + L
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 352



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L + G+L   GL PD  +Y ++I G+     +D+A  LF ++    + P  +    +
Sbjct: 117 DLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSI 175

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK   MD A  +  KM++ G   ++ TYS +IDG  KS+ M  A  V E+M E   
Sbjct: 176 IKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT 235

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN ++Y+ LI G    G+  E++  F       ++P V      I    K GR  EA  
Sbjct: 236 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 295

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM+  G  PD +  ST+
Sbjct: 296 IFDSMVLKGPKPDIISYSTM 315



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L   +   G+EP+   Y T++ GYC   R+D+A+ +F  +    +KP S+ ++
Sbjct: 502 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 561

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY  ++ G  ++     A  + E++   
Sbjct: 562 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 621

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P++ TY+++I    K     EA
Sbjct: 622 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 681

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ S+ ++G   D  LL+ +
Sbjct: 682 DNLFISVEKSGHASDSRLLNHI 703



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 35/188 (18%)

Query: 48  QLFEKLTCVQLKPNSI-TFTILID----------------------------------AF 72
           Q  ++  C +  P +I T+ ILID                                   F
Sbjct: 85  QRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGF 144

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
            K+G +D A  +F +M+E+G    ++  + +I    K + M  A  + ++M ++ I+P++
Sbjct: 145 VKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDL 204

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            +YS++IDGLCK   M++A       ++    P+ +TY  LI GY  +G   E+++++  
Sbjct: 205 FTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 264

Query: 193 MLRNGIMP 200
           M   G++P
Sbjct: 265 MSSCGVIP 272



 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ LID Y +         +   + +N + P+  SYS LI G  K G +++A   F   
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 160

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++  +LP ++    +I+  CK     +A  +   M+ +GI PD    S + D
Sbjct: 161 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 212


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ G+CS  +  EA+   +K+    ++P+
Sbjct: 126 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G K ++ TY  L+ GY     +     + +
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SIL+    K+  +EEA+  F       L P+ VTY  +I   CK+G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ PD ++ ++L
Sbjct: 306 RVEDAMLYFEQMIDEGLRPDSIVYNSL 332



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 108/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+PDI TY T++ GY +   L E   L + +    + PN   F+IL+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++++A ++FSKM ++G   N VTY  +ID   KS  ++ A   +E+M +  + P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+ LI  LC     E+A   F   LD  +    + +  +I  +CK GR  E+ +L+
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384

Query: 191 DSMLRNGIMPD 201
           D M+R G+ PD
Sbjct: 385 DLMVRIGVKPD 395



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 10/200 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTIL 68
           A  +F +L  RG+ PD+ +YN ++ G C  NR  EA++L   +        P+ ++++ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ F KEG +D       KML++    NVVTY+ +I    K+Q +  A +V   M ++ +
Sbjct: 95  INGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ ++Y+ ++ G C  G  +EA+        + + PDVVTY  L+   CK GR TEA +
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM + G+ PD     TL
Sbjct: 208 IFDSMTKRGLKPDITTYGTL 227



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 105/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+    ++   G+EPD++TYN+++   C   R  EA ++F+ +T   LKP+  T+  L+ 
Sbjct: 170 AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQ 229

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  +G + +   +   M+  G   N   +S L+  Y K + ++ A  V+ +M +  ++P
Sbjct: 230 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNP 289

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y  +ID LCK G +E+A+  F   +D  L PD + Y  LI   C   +  +A +L+
Sbjct: 290 NAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELF 349

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             ML  GI    +  +++ D
Sbjct: 350 LEMLDRGICLSTIFFNSIID 369



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 97/170 (57%), Gaps = 10/170 (5%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYS 101
           ++A  +F++L    + P+  ++ IL++  C E R  +A  +   M + G     +VV+YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+G+FK  ++       ++M +  ISPN+V+Y+ +I  LCK   +++A+      + +
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            ++PD +TY  ++ G+C +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 195



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 10/186 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL PD I YN++I   C  ++ ++A +LF ++    +  
Sbjct: 300 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 359

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++T                A D++
Sbjct: 360 STIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG----------RNDEAKDLF 409

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
                N + PN  +Y ++ + +  +GL+EE    F    DN    D      ++R   + 
Sbjct: 410 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 469

Query: 181 GRPTEA 186
           G  T A
Sbjct: 470 GEITRA 475


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++  A K   +L + GLEPD  TYNT+I GYC +  L  A ++ +   C    P+
Sbjct: 296 LCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPD 355

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LI+  C+   +D A  +F+  L KG K  V+ Y+ LI G  +   +  A  +  
Sbjct: 356 EFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMN 415

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM EN  S +I +Y+++I+GLCK G + +A    + A+    +PDV T+  LI GYCK  
Sbjct: 416 EMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQL 475

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +    +Q+ + M  +G+ PD
Sbjct: 476 KMETTIQILNKMWSHGVTPD 495



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 113/202 (55%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D AL LF     +GL+P +I YN +I G C    + +A+Q+  +++      +  T+ 
Sbjct: 371 EIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYN 430

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I+  CK G + DA  + +  + KG   +V T++ LIDGY K   M++   +  +M  +
Sbjct: 431 LVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSH 490

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P++++Y+ +++GL K    E+ +  F   ++   +P+ +TY IL    CKAG+  EA
Sbjct: 491 GVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEA 550

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L D +L  GI PD +  +T+
Sbjct: 551 LDLVDEILNKGITPDTVSFATI 572



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 110/209 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+ +   +   GL PD++TYNT+ICG C  + + EA +   KL    L+P+
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LID +CK G + +A  +    + KG   +  TY  LI+G  ++  +  A  ++ 
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFN 380

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                 + P ++ Y++LI GLC+ GL+ +AL   +   +N    D+ TY ++I G CK G
Sbjct: 381 AALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMG 440

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             ++A  L +  +  G +PD    +TL D
Sbjct: 441 CVSDANNLMNDAIAKGYVPDVFTFNTLID 469



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 4/197 (2%)

Query: 1   MLIK----ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           MLIK    E  +  AL++  ++++ G   DI TYN +I G C +  + +A  L       
Sbjct: 396 MLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK 455

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
              P+  TF  LID +CK+ +M+    + +KM   G   +V+TY+ +++G  K+   +  
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            + +E M E    PN ++Y+IL + LCK G + EAL      L+  + PD V++A +I G
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISG 575

Query: 177 YCKAGRPTEAMQLYDSM 193
           +   G    A QL+  M
Sbjct: 576 FANNGDLKGAYQLFRRM 592



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 112/205 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +  A+ +F ++     EP +++YN I+          +A ++F ++  V + P+  
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TFTI I +FC+  R   A  + + M+ +G + N V Y  ++ G+++      A++++ +M
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++ +++ L+  LCK+G ++E+    +  L   +  ++ T+ I I+G C+ G  
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
           + AM + DS++R G+ PD +  +TL
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTL 292



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 102/192 (53%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +AL+L   +  +G + + + Y T++ G+   N   EA +LF  +  + + P+  TF  L+
Sbjct: 164 SALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLL 223

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              CK+G + ++  + +K+L+KG  +N+ T++  I G  +   +  A  + + +    ++
Sbjct: 224 HTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLT 283

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++V+Y+ LI GLCK   + EA    H  ++  L PD  TY  LI GYCK G    A ++
Sbjct: 284 PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKI 343

Query: 190 YDSMLRNGIMPD 201
               +  G +PD
Sbjct: 344 LQGAICKGFVPD 355



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 99/198 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  +   G+ PD+ T+N ++   C    + E+ +L  K+    +  N  TF I I 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++G +  A  M   ++ +G   +VVTY+ LI G  K+ N+  A     ++    + P
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP 319

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           +  +Y+ LIDG CK G+++ A      A+    +PD  TY  LI G C+      A+ L+
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF 379

Query: 191 DSMLRNGIMPDGLLLSTL 208
           ++ L  G+ P  +L + L
Sbjct: 380 NAALGKGLKPTVILYNML 397



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 13/204 (6%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  ++  +++  ++   G+ PD+ITYN+++ G     + ++ ++ FE +      PN I
Sbjct: 473 KQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKI 532

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL ++ CK G++++A  +  ++L KG   + V+++ +I G+  + ++K A+ ++  M
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592

Query: 124 CEN-NISPNIVSYSILIDGLCKR--GLMEEALY----AFHCALDNHLLPDVVTYAILIRG 176
            E   +S    +Y+I+I+   ++    M E L+    A  CA      PD  TY ++I G
Sbjct: 593 GEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA------PDTYTYRVMIDG 646

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMP 200
           +C  G      +    M+  G +P
Sbjct: 647 FCITGNTDSGYKFLLEMIEKGFIP 670



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  + +L  ++  +G+  ++ T+N  I G C    L  A+ + + +    L P+
Sbjct: 226 LCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPD 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI   CK   + +A     K++  G + +  TY+ LIDGY K   +++A  + +
Sbjct: 286 VVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
                   P+  +Y  LI+GLC+   ++ AL  F+ AL   L P V+ Y +LI+G C+ G
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
              +A+Q+ + M  NG   D      +  YNL  +G
Sbjct: 406 LILQALQMMNEMSENGCSSD------IWTYNLVING 435



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 1/168 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-TCVQLKP 60
           L K   ++ AL L  ++ ++G+ PD +++ TII G+ +   L  A QLF ++    ++  
Sbjct: 541 LCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSH 600

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
            + T+ I+I+AF ++  +     +F +M   G   +  TY  +IDG+  + N  S +   
Sbjct: 601 TTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFL 660

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
            EM E    P++ ++  +I+ LC +  + EA+   H  + N ++P+VV
Sbjct: 661 LEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
            Y   +  Y +   ++ A DV+E M   N  P+++SY+ +++ L + G  ++A   F   
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
            +  ++PDV T+ I I+ +C+  RP  A++L ++M+  G
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQG 176



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 67/133 (50%)

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           + ++ ++G++ +A  +F +M     + +V++Y+ +++   +S   K A  V+  M    I
Sbjct: 83  MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ +++I I   C+      AL   +  +      + V Y  ++ G+ +     EA +
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYE 202

Query: 189 LYDSMLRNGIMPD 201
           L++ MLR GI PD
Sbjct: 203 LFNDMLRIGIFPD 215


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ G+CS  +  EA+   +K+    ++P+
Sbjct: 126 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G K ++ TY  L+ GY     +     + +
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SIL+    K+  +EEA+  F       L P+ VTY  +I   CK+G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ PD ++ ++L
Sbjct: 306 RVEDAMLYFEQMIDEGLRPDSIVYNSL 332



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 110/196 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+PDI TY T++ GY +   L E   L + +    + PN   F+IL+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++++A ++FSKM ++G   N VTY  +ID   KS  ++ A   +E+M +  + P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+ LI  LC     E+A   F   LD  +    + +  +I  +CK GR  E+ +L+
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384

Query: 191 DSMLRNGIMPDGLLLS 206
           D M+R G+ PD + L 
Sbjct: 385 DLMVRIGVKPDIITLG 400



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 10/200 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTIL 68
           A  +F +L  RG+ PD+ +YN ++ G C  NR  EA++L   +        P+ ++++ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ F KEG +D       KML++    NVVTY+ +I    K+Q +  A +V   M ++ +
Sbjct: 95  INGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ ++Y+ ++ G C  G  +EA+        + + PDVVTY  L+   CK GR TEA +
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM + G+ PD     TL
Sbjct: 208 IFDSMTKRGLKPDITTYGTL 227



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 105/200 (52%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+    ++   G+EPD++TYN+++   C   R  EA ++F+ +T   LKP+  T+  L+ 
Sbjct: 170 AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQ 229

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +  +G + +   +   M+  G   N   +S L+  Y K + ++ A  V+ +M +  ++P
Sbjct: 230 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNP 289

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N V+Y  +ID LCK G +E+A+  F   +D  L PD + Y  LI   C   +  +A +L+
Sbjct: 290 NAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELF 349

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             ML  GI    +  +++ D
Sbjct: 350 LEMLDRGICLSTIFFNSIID 369



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 97/170 (57%), Gaps = 10/170 (5%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYS 101
           ++A  +F++L    + P+  ++ IL++  C E R  +A  +   M + G     +VV+YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+G+FK  ++       ++M +  ISPN+V+Y+ +I  LCK   +++A+      + +
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            ++PD +TY  ++ G+C +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 195



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 59/99 (59%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL PD I YN++I   C  ++ ++A +LF ++    +  
Sbjct: 300 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 359

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++T
Sbjct: 360 STIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+++   +   G+ PD +TYN+I+ G+CS  +  EA+   +K+    ++P+
Sbjct: 126 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 185

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+D  CK GR  +A  +F  M ++G K ++ TY  L+ GY     +     + +
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N I PN   +SIL+    K+  +EEA+  F       L P+ VTY  +I   CK+G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM  ++ M+  G+ PD ++ ++L
Sbjct: 306 RVEDAMLYFEQMIDEGLRPDSIVYNSL 332



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A K+F  +T RGL+PDI TY T++ GY +   L E   L + +    + PN   F+IL+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A+ K+ ++++A ++FSKM ++G   N VTY  +ID   KS  ++ A   +E+M +  + P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + + Y+ LI  LC     E+A   F   LD  +    + +  +I  +CK GR  E+ +L+
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384

Query: 191 DSMLRNGIMPDGLLL-----STLADYNL 213
           D M+R G+ PD + L     S   DY+L
Sbjct: 385 DLMVRIGVKPDIITLGRFLGSARRDYSL 412



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 10/200 (5%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT--CVQLKPNSITFTIL 68
           A  +F +L  RG+ PD+ +YN ++ G C  NR  EA++L   +        P+ ++++ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+ F KEG +D       KML++    NVVTY+ +I    K+Q +  A +V   M ++ +
Sbjct: 95  INGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ ++Y+ ++ G C  G  +EA+        + + PDVVTY  L+   CK GR TEA +
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM + G+ PD     TL
Sbjct: 208 IFDSMTKRGLKPDITTYGTL 227



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 25/224 (11%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K   ++ A+  F Q+ D GL PD I YN++I   C  ++ ++A +LF ++    +  
Sbjct: 300 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 359

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT-----------YSCLIDGYFK 109
           ++I F  +ID+ CKEGR+ ++  +F  M+  G K +++T           YS  ++ YF 
Sbjct: 360 STIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFI 419

Query: 110 SQNMKSAFDVYEEMCENNISPNIVS----------YSILIDGLCKRGLMEEALYAFH--C 157
             NM +  D  +E   N    N  S          Y+I++ GLCK  L ++AL  F   C
Sbjct: 420 FTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLC 479

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            +D  L  +  T+ I+I    K GR  EA  L+ +   NG++P+
Sbjct: 480 LMDLKL--EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 521



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 97/170 (57%), Gaps = 10/170 (5%)

Query: 44  DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYS 101
           ++A  +F++L    + P+  ++ IL++  C E R  +A  +   M + G     +VV+YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +I+G+FK  ++       ++M +  ISPN+V+Y+ +I  LCK   +++A+      + +
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
            ++PD +TY  ++ G+C +G+P EA+     M  +G+ PD +  ++L DY
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 195



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 68/150 (45%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P + TYN I+ G C     D+A+++F+ L  + LK  + TF I+IDA  K GR D+A  +
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F      G   N  TY  + +       ++    ++  M +N  + +    + ++  L +
Sbjct: 510 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 569

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILI 174
           RG +  A        + H   +  T ++ I
Sbjct: 570 RGEITRAGTYLSMIDEKHFSLEASTASLFI 599



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 23/205 (11%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIIT-----------YNTIICGYCSLNRLDEAVQLFEK 52
           KE  +  + KLF  +   G++PDIIT           Y+  +  Y     +       EK
Sbjct: 373 KEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDK-EK 431

Query: 53  LTCVQLK-----------PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
            T V              P   T+ I++   CK    DDA  MF  +     K    T++
Sbjct: 432 ETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 491

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
            +ID   K      A D++     N + PN  +Y ++ + +  +GL+EE    F    DN
Sbjct: 492 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 551

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEA 186
               D      ++R   + G  T A
Sbjct: 552 GCTVDSGMLNFIVRELLQRGEITRA 576


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 37/240 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A +LF  + +RG + DII YN ++ GYC  N++ EA +LF  +     +P++IT+TI
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+  +C   ++D+A  +F  M+E+G   +V +Y+ LI GY K + +  A ++ E+M   N
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383

Query: 128 ISPNIVSYSILIDGLCKRG-------LMEEALY--------------------------- 153
           + PNI++Y+ ++DGLCK G       L++E  Y                           
Sbjct: 384 LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKA 443

Query: 154 -AF--HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            AF  H   +    P+V +Y ILI G CK  R  EA+ L++ M    ++PD +  + L D
Sbjct: 444 IAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLD 503



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 17/225 (7%)

Query: 10  AALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF--- 65
           AA++L  ++ +R L +P++I YNT++ G C    ++EA  L  K+    + P+  T+   
Sbjct: 179 AAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSL 238

Query: 66  -------------TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN 112
                        T L++ FC   ++D+A  +F+ M+E+G + +++ Y+ L++GY  +  
Sbjct: 239 IYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNK 298

Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
           +  A  ++  M E    P+ ++Y+IL+ G C    ++EA   FH  ++  L+PDV +Y I
Sbjct: 299 VGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNI 358

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           LI+GYCK  R  EAM L + M    ++P+ +  +++ D   +S G
Sbjct: 359 LIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGG 403



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 37/231 (16%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A  LF  + +RGL PD+ +YN +I GYC   R+ EA+ L E +    L PN IT+  
Sbjct: 334 VDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNS 393

Query: 68  LIDAFCKEGRMDDATMMFSKM-------------------------------------LE 90
           ++D  CK G + DA  +  +M                                      E
Sbjct: 394 VVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           +    NV +Y+ LI G  K++ +  A +++  MC  N+ P+IV+Y+IL+D L     +++
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           A+      +D  + P++ TY ILI G  K GRP  A ++   +   G  PD
Sbjct: 514 AIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPD 564



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 4/216 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ LF ++ D    P I+ +  I+     +     A+ L+  +    + P ++TF I
Sbjct: 35  IDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+ FC  G+MD A  +  K+L+ G + NVVT++ L+ G+  +  M  A  +Y+EM    
Sbjct: 95  LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154

Query: 128 ISPNIVSYSILIDGLCKR--GLMEEALYAFHCALDNHLL-PDVVTYAILIRGYCKAGRPT 184
           I  + V Y  LI+GLCK   G    A+       +  L+ P+++ Y  ++ G CK G   
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNIN 214

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           EA  L   M+  GI PD    S+L  Y L  +G ++
Sbjct: 215 EARVLCSKMIVQGIFPDIFTYSSLI-YGLCRAGQRK 249



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 5   ECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           EC ++ A+  F  L  +R   P++ +YN +I G C   RLDEA+ LF  +    L P+ +
Sbjct: 438 EC-VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIV 496

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+DA     ++D A  +  +++++G   N+ TY+ LI+G  K    K+A  +   +
Sbjct: 497 TYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYL 556

Query: 124 CENNISPNIVSYSILIDGLCKRGL 147
                 P++ +Y  +I+ LCK GL
Sbjct: 557 SIRGYHPDVKTY--IINELCKGGL 578



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 2/183 (1%)

Query: 38  CSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
           C  + +D+AV LF ++  +   P+ + FT ++    K      A  +++ M  KG     
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
           VT++ LI+ +     M  AF V  ++ +    PN+V+++ L+ G C    M +ALY +  
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 158 ALDNHLLPDVVTYAILIRGYCKA--GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
            +   +  D V Y  LI G CK+  G+P  A+QL   M    ++   L++     + L  
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 216 SGS 218
            G+
Sbjct: 210 DGN 212



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ LF  +  + L PDI+TYN ++    +  +LD+A+ L  ++    + PN  
Sbjct: 472 KNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLR 531

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           T+ ILI+   K GR   A  +   +  +G   +V TY
Sbjct: 532 TYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D  ++L  Q+   G  PD+ITY T+I G+C    +DEAV L + +T    KPN+I++TI
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++   C   R  DA  + S+M+++G   N +T++ LI+   K   ++ A ++ ++M  N 
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP+++SYS +IDGL K G  +EAL   +  ++  + P+ + Y+ +     + GR  + +
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           Q++D++    I  D +L + +   +L   G  E  I
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVIS-SLCKRGETERAI 597



 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 125/241 (51%), Gaps = 35/241 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR--------------------- 42
           KE HL  A ++  ++   GL+P+++ YNT++ G CS  R                     
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368

Query: 43  --------------LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
                         +D  ++L E++      P+ IT+T +I+ FCKEG +D+A M+   M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
              G K N ++Y+ ++ G   ++    A D+  +M +     N ++++ LI+ LCK+GL+
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           E+A+      L N   PD+++Y+ +I G  KAG+  EA++L + M+  G+ P+ ++ S++
Sbjct: 489 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548

Query: 209 A 209
           A
Sbjct: 549 A 549



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 100/201 (49%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D AL L   L   G EPD+++YN ++ G C   R     +L E++  +   PN +TF  
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+ G  +    + ++M E G   ++  Y+ +IDG  K  ++K A ++   M    
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V Y+ L+ GLC     EE         D     D VT+ IL+  +C+ G     +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +L + ML +G MPD +  +T+
Sbjct: 388 ELLEQMLVHGCMPDVITYTTV 408



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 96/189 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +L  ++      P+I+T+NT+I   C     +   ++  ++      P+   +  +ID  
Sbjct: 248 ELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGI 307

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CKEG +  A  + ++M   G K NVV Y+ L+ G   ++  +   ++  EM + +   + 
Sbjct: 308 CKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V+++IL+D  C+ GL++  +      L +  +PDV+TY  +I G+CK G   EA+ L  S
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427

Query: 193 MLRNGIMPD 201
           M   G  P+
Sbjct: 428 MTACGCKPN 436



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 95/206 (46%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A+++   L  RG   D+   N ++   C    +D+A+ L   L     +P+ +++  ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL 234

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C   R      +  +M+      N+VT++ LI    ++   +   +V  +M E+  +
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+I  Y+ +IDG+CK G ++ A    +      L P+VV Y  L++G C A R  E  +L
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQS 215
              M       D +  + L D+  Q+
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQN 380



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 79/150 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  ++ A++L  Q+   G  PD+I+Y+T+I G     + DEA++L   +    + PN
Sbjct: 482 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +I ++ +  A  +EGR++    MF  + +   +++ V Y+ +I    K    + A +   
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
            M  +   PN  +Y+ILI GL   G ++EA
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEA 631



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 92/198 (46%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++  RG  P    Y+ I+   C       AV++ E L       +     ++++
Sbjct: 141 ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLN 200

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C +G +D A  +   +   G + +VV+Y+ ++ G   ++      ++ EEM      P
Sbjct: 201 AICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 260

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NIV+++ LI  LC+ GL E          ++   PD+  YA +I G CK G    A ++ 
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320

Query: 191 DSMLRNGIMPDGLLLSTL 208
           + M   G+ P+ +  +TL
Sbjct: 321 NRMPSYGLKPNVVCYNTL 338



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 3/182 (1%)

Query: 30  YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
           YN ++ GYC   +L+ A +L      V + PN+ T+  ++ A C  GR+ DA  +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
            +G       Y  +++   +    +SA  V E++     + ++ + +++++ +C +G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
           +AL+           PDVV+Y  +++G C A R     +L + M+R    P+ +  +TL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 210 DY 211
            Y
Sbjct: 270 SY 271



 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 62/123 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D AL+L   + ++G+ P+ I Y++I        R+++ +Q+F+ +    ++ +
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +  +I + CK G  + A    + M+  G   N  TY+ LI G      +K A ++  
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636

Query: 122 EMC 124
           E+C
Sbjct: 637 ELC 639



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  ++  +++F  + D  +  D + YN +I   C     + A++    +      PN
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
             T+TILI     EG + +A  M +++  KG
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 123/244 (50%), Gaps = 35/244 (14%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++F ++    +EPDI+TYN +  G+C    + E   L +++    L+PNS+T+ I I 
Sbjct: 453 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 512

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ------------------- 111
            FC+ G + +A ++F+ + EKG     V YS ++ GY  S                    
Sbjct: 513 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 572

Query: 112 ----------------NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
                           N++ A +V + M E+++ P+++SYS LI   C+ G M++A   F
Sbjct: 573 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 632

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
           H  +   L  DV+ Y IL+ GYCKAGR  EA QL+  M   GI PD +  + L D +L+ 
Sbjct: 633 HDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 692

Query: 216 SGSQ 219
           +  Q
Sbjct: 693 TLQQ 696



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 16/211 (7%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+I+Y+ +I  YC    +D+A   F  +    L  + I +TIL++ +CK GR+ +A  +
Sbjct: 607 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQL 666

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE----------------MCENNI 128
           F +M   G K +V+ Y+ L+DG+ K    +    + +E                M +  I
Sbjct: 667 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQI 726

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++  Y++LIDG CK   + EA   F   L   L PD   Y  LI GYC  G  ++A  
Sbjct: 727 EPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAED 786

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           L   M+  GI PD L  S L   +L+S   Q
Sbjct: 787 LLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 817



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 44/254 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KL      +G  PD+  Y+ +I  YC +  L  AV  +E +    ++ N
Sbjct: 304 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETN 363

Query: 62  -----------------------------------SITFTILIDAFCKEGRMDDATMMFS 86
                                               + + I +D +CK G M++A  + +
Sbjct: 364 CHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 423

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M   G   + + Y+CLI GY     M++A  V+EEM + NI P+IV+Y+IL  G CK G
Sbjct: 424 EMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 483

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI-------- 198
           L+ E         D  L P+ +TY I I G+C+ G  +EA  L++ +   GI        
Sbjct: 484 LVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 543

Query: 199 -MPDGLLLSTLADY 211
            M  G LLS   D+
Sbjct: 544 SMVCGYLLSGWTDH 557



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+  F +  D GL  D + YN  +  YC    ++EAV+L  ++    L P+ I +T LI 
Sbjct: 383 AIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLIS 442

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C +G M +A  +F +ML+   + ++VTY+ L  G+ KS  +   FD+ + M +  + P
Sbjct: 443 GYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP 502

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y I I G C+ G + EA   F+   +  +    V Y+ ++ GY  +G    A  L+
Sbjct: 503 NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLF 562

Query: 191 DSMLRNGIMPDGLLLSTL 208
             + R G + D    S L
Sbjct: 563 VRVARQGNLVDHFSCSKL 580



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 41/251 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D AL+++ ++T+ G++PD   Y++ + G C   + D A  + +++   ++   
Sbjct: 234 LFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVE 293

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +++D  CKE R+D+A  +      +G   +V  YS LI  Y K  N+ +A D YE
Sbjct: 294 AMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYE 353

Query: 122 EMCENNISPN--IVS---------------------------------YSILIDGLCKRG 146
            M  + I  N  IVS                                 Y+I +D  CK G
Sbjct: 354 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 413

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M EA+   +      L PD + Y  LI GYC  G    A Q+++ ML+  I PD     
Sbjct: 414 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPD----- 468

Query: 207 TLADYNLQSSG 217
            +  YN+ +SG
Sbjct: 469 -IVTYNILASG 478



 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 51/253 (20%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------EKLTCV 56
           +L  A  LF  + ++G++   + Y++++CGY      D A  LF          +  +C 
Sbjct: 519 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCS 578

Query: 57  QL-------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +L                          P+ I+++ LI  +C+ G MD A + F  M+++
Sbjct: 579 KLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 638

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +V+ Y+ L++GY K+  ++ A  ++ +M    I P++++Y++L+DG  K  L +  
Sbjct: 639 GLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGW 698

Query: 152 -----------LYAFHCAL-----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
                      L A H  L     D  + PDV  Y +LI G CKA    EA +L+D ML+
Sbjct: 699 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 758

Query: 196 NGIMPDGLLLSTL 208
            G+ PD    + L
Sbjct: 759 KGLTPDAYAYTAL 771



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 4/211 (1%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C     + A + LF  +   G+ P + T+N ++         +  +  + ++ C Q
Sbjct: 160 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 219

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+  TF I+  +  +  ++D+A  ++++M E G K +   YS  + G         A+
Sbjct: 220 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 279

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            + +E+    +    ++Y++++DGLCK   ++EA             PDV  Y+ LIR Y
Sbjct: 280 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 339

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CK G    A+  Y++M+ +GI  +  ++S L
Sbjct: 340 CKMGNLINAVDHYEAMVSHGIETNCHIVSYL 370



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC--SLNRLDEAV-------------- 47
           K   L  A +LF Q+T+ G++PD+I Y  ++ G+   +L +  E +              
Sbjct: 656 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN 715

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +L   +  +Q++P+   +T+LID  CK   + +A  +F +ML+KG   +   Y+ LI+GY
Sbjct: 716 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 775

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
                +  A D+ +EM +  I P+ +++S+L
Sbjct: 776 CSQGEISKAEDLLQEMIDKGIEPDELTFSVL 806



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 57/102 (55%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL   + D  +EPD+  Y  +I G C    L EA +LF+++    L P++  +T LI+ +
Sbjct: 716 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 775

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           C +G +  A  +  +M++KG + + +T+S L     +S+ ++
Sbjct: 776 CSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 817



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 53/101 (52%)

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
           CLI       ++++   ++  +C   + P++ ++++L+  + + G  E  L A++     
Sbjct: 159 CLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCF 218

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            L PDV T+AI+ R   +A +  EA+Q++  M   G+ PD 
Sbjct: 219 QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDA 259


>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D A ++  ++  + + P+++TY+T+I GY    RLDEA+ LF ++    +  + +
Sbjct: 224 KGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRV 283

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+  + K GR ++A  +  +M   G K + VTY+ L+ GY K    +    V+EEM
Sbjct: 284 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 343

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I PN+++YS LID   K GL +EA+  F       L  DVV Y+ LI   CK G  
Sbjct: 344 KAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLV 403

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+   D M + GI P+ +  +++ D
Sbjct: 404 ESAVSFLDEMTKEGIRPNVVTYNSIID 430



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 7/206 (3%)

Query: 12  LKLFGQLTDRGLEPDIITYNTII--CGY--CSLNRLDE---AVQLFEKLTCVQLKPNSIT 64
           L+  G   D GL+P+++TYN +I  CG      NR  E    + LF ++    ++ +  T
Sbjct: 155 LRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFT 214

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  L+DA CK G+MD A  + S+M  K    NVVTYS +IDGY K+  +  A +++ EM 
Sbjct: 215 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 274

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             +I  + VSY+ L+    K G  EEAL        + +  D VTY  L+ GY K G+  
Sbjct: 275 FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 334

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           E  ++++ M    I P+ L  STL D
Sbjct: 335 EVKRVFEEMKAERIFPNLLTYSTLID 360



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 99/178 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD AL LF ++    +  D ++YNT++  Y  L R +EA+ + +++    +K +++
Sbjct: 259 KAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAV 318

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  + K+G+ ++   +F +M  +    N++TYS LID Y K    + A +V+ E 
Sbjct: 319 TYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF 378

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +  +  ++V YS LID LCK GL+E A+          + P+VVTY  +I  + ++G
Sbjct: 379 KKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 436



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 42/183 (22%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+   +   ++F ++    + P+++TY+T+I  Y       EA+++F +     LK + +
Sbjct: 329 KQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 388

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD----- 118
            ++ LIDA CK G ++ A     +M ++G + NVVTY+ +ID + +S  ++ A +     
Sbjct: 389 LYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGD 448

Query: 119 ------------------------------------VYEEMCENNISPNIVSYSILIDGL 142
                                               V+ +M E +I PN+V++S +++  
Sbjct: 449 KEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNA- 507

Query: 143 CKR 145
           C R
Sbjct: 508 CSR 510



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/128 (17%), Positives = 54/128 (42%), Gaps = 41/128 (32%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQ------------- 48
           L K   +++A+    ++T  G+ P+++TYN+II  +     +++A +             
Sbjct: 397 LCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKEDNQIIK 456

Query: 49  ----------------------------LFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
                                       +F K+  + +KPN +TF+ +++A  +    +D
Sbjct: 457 IFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFED 516

Query: 81  ATMMFSKM 88
           A+M+  ++
Sbjct: 517 ASMLLEEL 524


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 106/184 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A + F  L+ +G  PD  TY T+I GY +   +DEA +L +++    L PN
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK   +D A  +F K+ +KG   NVVTY+ LIDGY K  NM +AF + +
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  ISP++V+YS LI+GLCK G +E ++   +  +   +   ++ Y  L++G  K  
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTS 903

Query: 182 RPTE 185
              E
Sbjct: 904 NYNE 907



 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFT 66
           ++AA  +   ++++G+  +++TY  +I GYC   ++DEA ++   +     L P+   + 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LID +C+ G++DDA  +  +ML  G K N+   + LI+GY K   +  A  V   M + 
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+ P+  SY+ L+DG C+ G   EA       L   + P V+TY  L++G C+ G   +A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           +Q++  M++ G+ PD +  STL D
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLD 480



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 108/198 (54%)

Query: 23  LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
           L P+ I YN  I G C   ++D+A + F  L+     P++ T+  LI  +   G +D+A 
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769

Query: 83  MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
            +  +ML +G   N+VTY+ LI+G  KS+N+  A  ++ ++ +  + PN+V+Y+ LIDG 
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829

Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
           CK G M+ A       ++  + P VVTY+ LI G CK G    +M+L + M++ G+    
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL 889

Query: 203 LLLSTLADYNLQSSGSQE 220
           +   TL     ++S   E
Sbjct: 890 IEYCTLVQGGFKTSNYNE 907



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 36/243 (14%)

Query: 4   KECHLDAALK-LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K+C +D A K L G   +  L PD   Y  +I GYC   ++D+AV+L +++  + LK N 
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
                LI+ +CK G + +A  + ++M++   K +  +Y+ L+DGY +  +   AF++ ++
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDK 427

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA----------- 171
           M +  I P +++Y+ L+ GLC+ G  ++AL  +H  +   + PD V Y+           
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMEN 487

Query: 172 ----------ILIRGY--------------CKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
                     IL RG+              CK G+  EA +++D M   G  PDG+   T
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547

Query: 208 LAD 210
           L D
Sbjct: 548 LID 550



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 107/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  + + A  L+  +  RG     IT+NT+I G C + ++ EA ++F+K+  +   P+
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LID +CK   +  A  +   M  +    ++  Y+ LI G FKS+ +    D+  
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    ++PNIV+Y  LIDG CK G++++A  ++    +N L  +++  + ++ G  + G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA  L   M+ +G  PD
Sbjct: 662 RIDEANLLMQKMVDHGFFPD 681



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 104/197 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +  A  +  ++ D  L+PD  +YNT++ GYC      EA  L +K+    ++P  +
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C+ G  DDA  ++  M++ G   + V YS L+DG FK +N + A  +++++
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                + + ++++ +I GLCK G M EA   F    D    PD +TY  LI GYCKA   
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A ++  +M R  I P
Sbjct: 559 GQAFKVKGAMEREXISP 575



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 37/242 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS- 62
           +E H   A  L  ++   G+EP ++TYNT++ G C +   D+A+Q++  +    + P+  
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV 473

Query: 63  ----------------------------------ITFTILIDAFCKEGRMDDATMMFSKM 88
                                             ITF  +I   CK G+M +A  +F KM
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK-RGL 147
            + G   + +TY  LIDGY K+ N+  AF V   M    ISP+I  Y+ LI GL K R L
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +E         +   L P++VTY  LI G+CK G   +A   Y  M  NG+  + ++ ST
Sbjct: 594 VEXTDLLTEMGIRG-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 208 LA 209
           + 
Sbjct: 653 MV 654



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 113/201 (56%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +F  +   G  P + + N+++           A  +++++  V + P+    +I+++
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 234

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           AFCK+G++D+A     KM   G + N+VTY  LI+GY    ++++A  V + M E  +S 
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           N+V+Y++LI G CK+  M+EA        +   L+PD   Y +LI GYC+ G+  +A++L
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
            D MLR G+  +  + ++L +
Sbjct: 355 LDEMLRLGLKTNLFICNSLIN 375



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 32/230 (13%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  ++  A K+ G +    + P I  YN++I G     RL E   L  ++    L PN +
Sbjct: 554 KASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIV 613

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA------- 116
           T+  LID +CKEG +D A   + +M E G  AN++  S ++ G ++   +  A       
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673

Query: 117 -------------------------FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                                     D  +E C+  + PN + Y+I I GLCK G +++A
Sbjct: 674 VDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 733

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
              F        +PD  TY  LI GY  AG   EA +L D MLR G++P+
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 36/243 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K      A  ++ Q+   G+ PD+   + ++  +C   ++DEA    +K+  + ++PN
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPN 260

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ +   G ++ A  +   M EKG   NVVTY+ LI GY K   M  A  V  
Sbjct: 261 IVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLR 320

Query: 122 EMCEN-NISPNIVSYSILID-----------------------------------GLCKR 145
            M E   + P+  +Y +LID                                   G CKR
Sbjct: 321 GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + EA       +D +L PD  +Y  L+ GYC+ G  +EA  L D ML+ GI P  L  
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 206 STL 208
           +TL
Sbjct: 441 NTL 443


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L+ AL    ++ + GL PD+ITYNT+I  YC    + +A  L +++    LK +
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T   ++   CK  R +DA  +     ++G   + V+Y  ++  YFK  N + A  +++
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E  + P+I +Y+ LI GLC+   ++EA+   +  ++  L+PD  TY I+I  YCK G
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEG 573

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A + ++ M+ N   PD +  +TL
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTL 600



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 113/219 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
            KE + + AL+L+ Q+ +R L P I TYNT+I G C + RL EA+    +     L P+ 
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            T+ I+I A+CKEG +++A    +KM+E   K +VVT + L++G      +  A  ++E 
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
             E     ++++Y+ LI  +CK G ++ AL+ F       L PD  TY +++    +AGR
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
             EA  +   +  +G +        L   +   +  +EH
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEH 718



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 111/204 (54%), Gaps = 4/204 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +L      RG  PD ++Y T++  Y      + A++L++++   +L P+  T+  LI 
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIK 532

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+  R+ +A    ++ +EKG   +  TY+ +I  Y K  ++++AF  + +M EN+  P
Sbjct: 533 GLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP 592

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+ + L++GLC  G +++AL  F   ++     DV+TY  LI+  CK G    A+  +
Sbjct: 593 DVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFF 652

Query: 191 DSMLRNGIMPDG----LLLSTLAD 210
           D M   G+ PD     ++LS L++
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSE 676



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 1/194 (0%)

Query: 8   LDAALKLFGQLTDRGLE-PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +D A +L  ++   G   PD++TYNT++          +A++L E++    +KP  +T  
Sbjct: 329 VDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHN 388

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++ + CKEG++++A     K+ E+G   +V+TY+ LID Y K+ N+  AF + +EM   
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +  +  + + ++  LCK    E+A    H       +PD V+Y  ++  Y K   P  A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508

Query: 187 MQLYDSMLRNGIMP 200
           ++L+D M+   ++P
Sbjct: 509 LRLWDQMIERKLIP 522



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 37/239 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL     +   GL PD +TYNT++  +C    L EA  L  ++    + P   T+  L+ 
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS- 129
           AF + G +  AT +   M   G + ++ TY+ L  G  ++  +  AF + +EM     + 
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTAL 346

Query: 130 PNIVSYSILIDG-----------------------------------LCKRGLMEEALYA 154
           P++V+Y+ L+D                                    LCK G +EEAL  
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
                +  L PDV+TY  LI  YCKAG   +A  L D M+  G+  D   L+T+  YNL
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL-YNL 464



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 36/237 (15%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           A+L +F  L +  L P+  T+N ++  +CS   L +A+     +    L P+++T+  L+
Sbjct: 191 ASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           +A C++G + +A  + ++M   G      TY+ L+  + +   +K A  V E M      
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310

Query: 130 PNIVSYSILIDGLCKRGLMEEAL--------------------------YAFHCA----- 158
           P++ +Y++L  GLC+ G ++EA                           + + C+     
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR 370

Query: 159 -----LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                 D  + P +VT+ I+++  CK G+  EA+   + +   G+ PD +  +TL D
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 36/174 (20%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD ALKLF    ++G + D+ITYNT+I   C +  +D A+  F+ +    L+P++ T+ +
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG---------------------------PKAN---- 96
           ++ A  + GR ++A  M  K+ + G                           P+A     
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEK 729

Query: 97  -----VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                + TY   ++G      +K A  V +EM +  +  +  +Y  L++GL KR
Sbjct: 730 AQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKR 783



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM--KSAFDVYEEMCENNISPNIVSYSIL 138
           A ++ S    +G + ++   + ++    +S +   +++ DV+  + E  + PN  ++++L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           +   C +G + +AL          L PD VTY  L+  +C+ G   EA  L   M R+GI
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 199 MPDGLLLSTL 208
            P     +TL
Sbjct: 275 APTQPTYNTL 284


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 119/201 (59%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +  ++  +G  P+++TY  +ICG+C +  ++EA++L++++     + + I+ T+
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ + CK  ++D A  +F +M   G + +++TYS LI G  K   ++ A  +YE+MC N 
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN + +  ++ GLC++G + +A   F   + ++L  D++ Y I+I GY K G   EA+
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +LY  +   GI P  +  ++L
Sbjct: 547 KLYKQLGEKGISPTIVTFNSL 567



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 2/198 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A   F  +   GL PD  +YN +I G C    + EA+ L   +    L+P+ +T+ I
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L   F   G ++ A  +  KML KGP  N+VTY+ LI G+ +  N++ A  +Y+EM  + 
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHG 416

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTEA 186
              +I+S ++L+  LCK   ++ A   F C ++ N L PD++TY+ LI G CK G   +A
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLF-CEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 187 MQLYDSMLRNGIMPDGLL 204
           + LY+ M  N I+P+ L+
Sbjct: 476 ILLYEKMCSNRIIPNSLI 493



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A KLF ++   GL PD+ITY+T+I G C    + +A+ L+EK+   ++ PN
Sbjct: 431 LCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN 490

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+    ++   C++G++  A M F  ++      +++ Y+ +IDGY K  N + A  +Y+
Sbjct: 491 SLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYK 550

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E  ISP IV+++ L+ G C    + +A         + L P+ VTY  L+  YC+ G
Sbjct: 551 QLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEG 610

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
                ++L   M    I P  +  + +     +    QE C
Sbjct: 611 NMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESC 651



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 123/210 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL L   + + GLEPD++TYN +  G+  L  ++ A  + +K+      PN +T+T+LI 
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C+ G +++A  ++ +M+  G + ++++ + L+    KS+ +  AF ++ EM  N + P
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRP 454

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++YS LI GLCK+G +++A+  +     N ++P+ + +  ++ G C+ G+ ++A   +
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           D ++ + +  D +L + + D  ++   ++E
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTRE 544



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 108/191 (56%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IK  +   A+KL+ QL ++G+ P I+T+N+++ G+C   +L +A +L + +    L+PN+
Sbjct: 537 IKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNA 596

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+T L++ +C+EG M     + S+M  K      +TY+ +I G  K   ++ +  + E+
Sbjct: 597 VTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLED 656

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    ++P+ VSY+ +I   CK   M +A   +   L ++L P  VTY ILI G+C  G 
Sbjct: 657 MDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGD 716

Query: 183 PTEAMQLYDSM 193
             +A  L  S+
Sbjct: 717 LKDADNLLVSL 727



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L  + +L   +   GL PD ++YNTII  +C    + +A QL++K+    L+P 
Sbjct: 641 LCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPT 700

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+ ILI+ FC  G + DA  +   +  +    N   Y+ +I  +    ++  A   + 
Sbjct: 701 SVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFR 760

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E     +I  YS +I  LCKR L+ EA Y F   L + + PD   + +L+  + + G
Sbjct: 761 QMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCG 820

Query: 182 RPTEAMQLYDSMLRNGIM 199
                 +L   M+++G +
Sbjct: 821 HLNSEFELLAEMIKSGWL 838



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 105/207 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++ + L+L  ++  + + P  ITY  +I G C   +L E+ QL E +  V L P+ +
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  +I AFCK   M  A  ++ KML    +   VTY+ LI+G+    ++K A ++   +
Sbjct: 668 SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSL 727

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               ++ N  +Y+ +I   C +G +++A+  F   ++      +  Y+ +I   CK    
Sbjct: 728 QNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLV 787

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           TEA   +  ML +G+ PD  L   L +
Sbjct: 788 TEAKYFFCMMLSDGVCPDQDLFEVLLN 814



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 4/206 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H +    ++ ++   G      T + ++ G C  +R  +AV  F+     + +P+ ++F 
Sbjct: 226 HSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFN 285

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++  +CK G +D A   F  ML+ G   +  +Y+ LI G   + +M  A D+  +M  +
Sbjct: 286 TIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENH 345

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P++V+Y+IL  G    GL+  A       L     P++VTY +LI G+C+ G   EA
Sbjct: 346 GLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEA 405

Query: 187 MQLYDSMLRNG----IMPDGLLLSTL 208
           ++LY  M+ +G    I+   +LL +L
Sbjct: 406 LKLYKEMISHGFQLSIISSTVLLGSL 431



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 5/192 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++ D      I TYN+++    +L   +    ++ ++       +  T +I++D
Sbjct: 198 ALFVLVKMKDLNFIVSIQTYNSLLY---NLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVD 254

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C++ R  DA + F     K  + +VV+++ ++  Y K   +  A   +  M ++ + P
Sbjct: 255 GLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLP 314

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAMQL 189
           +  SY+ILI GLC  G M EAL      ++NH L PD+VTY IL +G+   G    A  +
Sbjct: 315 DAYSYNILIHGLCIAGSMGEAL-DLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNI 373

Query: 190 YDSMLRNGIMPD 201
              ML  G  P+
Sbjct: 374 IQKMLIKGPNPN 385


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 111/192 (57%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ ++ + P+ ++YNT+I G+    ++  A ++F ++  + L PN IT+ ILI+ +C  G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
             ++A  +   M     + N VT   L++G +KS     A ++ E    N  S N +S++
Sbjct: 330 NFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHT 389

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           ++IDGLC+ GL++EA         + + PD++T+++LI G+CK G   +A ++   + R 
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYRE 449

Query: 197 GIMPDGLLLSTL 208
           G +P+ ++ STL
Sbjct: 450 GFVPNNVIFSTL 461



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 109/208 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +KE  +  A ++F ++ +  L P++ITYN +I GYC     +EA++L + +    ++PN
Sbjct: 290 FVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPN 349

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T   L++   K  + D A  +  +        N ++++ +IDG  ++  +  AF +  
Sbjct: 350 EVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EMC++ + P+I+++S+LI+G CK G + +A            +P+ V ++ LI   CK G
Sbjct: 410 EMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVG 469

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
              E M+ Y +M  NG   D    ++L 
Sbjct: 470 NVYEGMKFYAAMNLNGQNADNFTCNSLV 497



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 108/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           ++K C        F Q+    + P++ ++N +I   C   +L +AV +   +      P 
Sbjct: 150 MVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPT 209

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +++  L+   CK+GR   A ++   M  KG +A+V TY+  ID   ++      + V +
Sbjct: 210 IVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLK 269

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I+PN VSY+ LI+G  K G +  A   F+  ++ +L P+++TY ILI GYC  G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              EA++L D M  N + P+ + + TL +
Sbjct: 330 NFEEALRLLDVMEANDVRPNEVTIGTLLN 358



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 35/238 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +   +   G  P I++YNT++   C   R   A+ L   + C  ++ +  T+ +
Sbjct: 191 LKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNM 250

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            ID+ C+  R     ++  KM  K    N V+Y+ LI+G+ K   +  A  V+ EM E N
Sbjct: 251 FIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELN 310

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT------------------ 169
           +SPN+++Y+ILI+G C  G  EEAL        N + P+ VT                  
Sbjct: 311 LSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVAR 370

Query: 170 -----------------YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                            + ++I G C+ G   EA QL   M ++G+ PD +  S L +
Sbjct: 371 NILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLIN 428



 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 1/199 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A KL  +L    L  D I+YNT+I        L EAV+LFE++    + P+S T+T ++ 
Sbjct: 579 ARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638

Query: 71  AFCKEGRMDDATMMFSKMLEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              +EGR+  A +   ++++K     N + Y+C IDG FK+   K+A  +++EM E  +S
Sbjct: 639 GLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLS 698

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            ++++ + + DG  + G +  A        + +++P++ T+ IL+ GY +        +L
Sbjct: 699 LDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKL 758

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           Y+ M R+G  P+ L   +L
Sbjct: 759 YNLMRRSGFFPNRLTYHSL 777



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A +L  ++   G+ PDIIT++ +I G+C +  L++A ++  K+      PN++ F+ 
Sbjct: 401 LDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKA-------------------------------- 95
           LI   CK G + +    ++ M   G  A                                
Sbjct: 461 LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 96  ---NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA- 151
              N VT+ C+I+GY    +   AF V+++M      P+  +Y  L+  LCK     EA 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 152 --LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             L   HC     L  D ++Y  LI    K+G   EA++L++ M++N I+PD
Sbjct: 581 KLLKKLHCI---PLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A  +  + +      + I++  +I G C    LDEA QL  ++    + P+
Sbjct: 360 LYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPD 419

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            ITF++LI+ FCK G ++ A  + SK+  +G   N V +S LI    K  N+      Y 
Sbjct: 420 IITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYA 479

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N  + +  + + L+  LC+ G + EA    H      L+P+ VT+  +I GY   G
Sbjct: 480 AMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             + A  ++D M+  G  P      +L
Sbjct: 540 DGSGAFSVFDKMISCGHHPSPFTYGSL 566



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 90/189 (47%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
            +K +  +   G   D  T N+++   C   +L EA +    ++ + L PNS+TF  +I+
Sbjct: 474 GMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIIN 533

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +   G    A  +F KM+  G   +  TY  L+    K QN   A  + +++    ++ 
Sbjct: 534 GYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV 593

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + +SY+ LI  + K G + EA+  F   + N++LPD  TY  ++ G  + GR   A    
Sbjct: 594 DTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFL 653

Query: 191 DSMLRNGIM 199
             +++  I+
Sbjct: 654 GRLMQKEIL 662



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 1/179 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNS 62
           K  +L  A++LF ++    + PD  TY  I+ G     RL  A     +L   + L  NS
Sbjct: 607 KSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNS 666

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           I +T  ID   K G+   A  +F +M EKG   +++  + + DGY +   + SA  +  +
Sbjct: 667 IVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
               N+ PN+ +++IL+ G  +   +      ++    +   P+ +TY  LI G C  G
Sbjct: 727 TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 1/193 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           LI+E  L  A    G+L  +  L  + I Y   I G     +   A+ LF+++    L  
Sbjct: 640 LIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSL 699

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           + I    + D + + G++  A+ + SK   K    N+ T++ L+ GY + Q++ S F +Y
Sbjct: 700 DLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLY 759

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M  +   PN ++Y  LI GLC  G++E  +      +      D +T+ +LIR  C+ 
Sbjct: 760 NLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEI 819

Query: 181 GRPTEAMQLYDSM 193
               + + L  +M
Sbjct: 820 NDLDKVIDLTHNM 832



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 71/141 (50%)

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N   F +LI  + ++G +  A   FS ML +G K +V T + ++    K+      +  +
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M  + + PN+ S++ILI  LC +G +++A+        N  +P +V+Y  L+   CK 
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
           GR   A+ L   M   GI  D
Sbjct: 224 GRFKFALVLIHHMECKGIQAD 244



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 6/201 (2%)

Query: 14  LFGQLTDR----GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           LFG L D        P +  ++ +I  Y     +  AV  F  +     KP+  T  +++
Sbjct: 90  LFGVLMDTYPLCSSNPAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIM 147

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            +  K  R       F +ML      NV +++ LI        +K A ++   M  N   
Sbjct: 148 ASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYV 207

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P IVSY+ L+   CK+G  + AL   H      +  DV TY + I   C+  R  +   +
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLV 267

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              M    I P+ +  +TL +
Sbjct: 268 LKKMRNKMITPNEVSYNTLIN 288



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 69/138 (50%)

Query: 8    LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            +  A KL  Q+   G+  D      ++ G     +++EA+ + +++  ++  P + TFT 
Sbjct: 892  IQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTT 951

Query: 68   LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            L+  FCK+    +A  +   M     K ++V Y+ LI     + ++ +A D YEE+ +  
Sbjct: 952  LMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKG 1011

Query: 128  ISPNIVSYSILIDGLCKR 145
            + PN+ +Y +L+  +  +
Sbjct: 1012 LLPNMTTYRVLVSAISTK 1029



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/192 (19%), Positives = 80/192 (41%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +A  L  +  ++ + P++ T+N ++ GY     +    +L+  +      PN +T+  LI
Sbjct: 719 SASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLI 778

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C  G ++    M    + +    + +T++ LI    +  ++    D+   M    +S
Sbjct: 779 LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            +  +   + D L +R + +      H  L    +P    Y  +++  C+ G    A +L
Sbjct: 839 LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 190 YDSMLRNGIMPD 201
            D M+  GI  D
Sbjct: 899 KDQMVALGISLD 910



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 77/182 (42%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+  +K+           D +T+N +I   C +N LD+ + L   +   ++  +  T   
Sbjct: 787 LELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA 846

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           + D   +     +  +   +ML+KG       Y  ++    +  +++ AF + ++M    
Sbjct: 847 VTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALG 906

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           IS +  +   ++ GL   G +EEA++     L    +P   T+  L+  +CK     EA 
Sbjct: 907 ISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAH 966

Query: 188 QL 189
            L
Sbjct: 967 NL 968



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 72/158 (45%)

Query: 17   QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
            ++  +G  P    Y T++   C +  +  A +L +++  + +  +      ++      G
Sbjct: 866  EMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCG 925

Query: 77   RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            ++++A  +  +ML         T++ L+  + K  N K A ++   M    +  +IV+Y+
Sbjct: 926  KIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYN 985

Query: 137  ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            +LI   C  G +  AL  +       LLP++ TY +L+
Sbjct: 986  VLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/199 (20%), Positives = 80/199 (40%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           +  KL+  +   G  P+ +TY+++I G C+   L+  +++ +         + +TF +LI
Sbjct: 754 SCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLI 813

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C+   +D    +   M       +  T   + D   +    ++ F    EM +    
Sbjct: 814 RKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFI 873

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P    Y  ++  +C+ G ++ A       +   +  D      ++RG    G+  EAM +
Sbjct: 874 PTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWI 933

Query: 190 YDSMLRNGIMPDGLLLSTL 208
              MLR   +P     +TL
Sbjct: 934 LQRMLRMKKIPTTSTFTTL 952



 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 2/133 (1%)

Query: 81  ATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
           +  +F  +++  P   +N   +  LI  Y +   +  A + +  M      P++ + +++
Sbjct: 87  SNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMI 146

Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           +  + K          F   L + + P+V ++ ILI   C  G+  +A+ +   M RNG 
Sbjct: 147 MASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGY 206

Query: 199 MPDGLLLSTLADY 211
           +P  +  +TL  +
Sbjct: 207 VPTIVSYNTLLSW 219



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 11/107 (10%)

Query: 26   DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
            DI+ YN +I   C+   +  A+  +E++    L PN  T+ +L+ A   +  +    ++ 
Sbjct: 980  DIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVL 1039

Query: 86   SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNISPN 131
              + ++G          L+ GY   ++ KS  D    + + N++ PN
Sbjct: 1040 KDLNDRG----------LVSGYLDGKSQKSCRDFVVAIKKLNSLKPN 1076


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P+++T+N+++ GYC +  ++EA  L + +  + ++PN
Sbjct: 539 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 598

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D +CK GR+DDA  +F  ML KG K   V YS ++ G F+++   +A  ++ 
Sbjct: 599 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 658

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +Y +++ GLC+    +EA          ++  D++T+ I+I    K G
Sbjct: 659 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 718

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+D++   G++P+
Sbjct: 719 RRQEAKELFDAISTYGLVPN 738



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F  + ++G+ PD +T+ T+I   C + RLD+A+  F  +  + + P+   +  
Sbjct: 439 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 498

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           LI   C  G +  A  + S+M+ K  P   V  +S +I+   K   +    D+ + M + 
Sbjct: 499 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 558

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+++ L++G C  G MEEA           + P+   Y  L+ GYCK GR  +A
Sbjct: 559 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 618

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + ++  ML  G+ P  +L S +
Sbjct: 619 LTVFRDMLHKGVKPTSVLYSII 640



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT-FT 66
           LD AL  F  + D G+ P    Y  +I G C+   L +A +L  ++    + P  +  F+
Sbjct: 474 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 533

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CKEGR+ +   +   M++ G + NVVT++ L++GY    NM+ AF + + M   
Sbjct: 534 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 593

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN   Y  L+DG CK G +++AL  F   L   + P  V Y+I++ G  +A R T A
Sbjct: 594 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653

Query: 187 MQLYDSMLRNG 197
            +++  M+ +G
Sbjct: 654 KKMFHEMIESG 664



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G+ P+   +N +I  Y     +D+A+ +FE +    + P+++TF  +I + C
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   Y CLI G      +  A ++  EM   +I P  V
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            Y S +I+ LCK G + E        +     P+VVT+  L+ GYC  G   EA  L D+
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   GI P+  +  TL D
Sbjct: 590 MASIGIEPNCYIYGTLVD 607



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 38/240 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+ + G  P+ ITYN++I GY      +E+V++F++++   + P 
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC------------------- 102
                  I A  K GR ++A  +F  M+ KGPK ++++YS                    
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHN 409

Query: 103 -------------------LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
                              LI+ Y +   M  A  ++E+M    + P+ V+++ +I  LC
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           + G +++AL+ F+  +D  + P    Y  LI+G C  G   +A +L   M+   I P G+
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529



 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 1/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L + G+L   GL PD  +Y ++I G+     +D+A  LF ++    + P  +    +
Sbjct: 193 DLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSI 251

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK   MD A  +  KM++ G   ++ TYS +IDG  KS+ M  A  V E+M E   
Sbjct: 252 IKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT 311

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN ++Y+ LI G    G+  E++  F       ++P V      I    K GR  EA  
Sbjct: 312 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 371

Query: 189 LYDSMLRNGIMPDGLLLSTLADY 211
           ++DSM+  G  PD +  ST A +
Sbjct: 372 IFDSMVLKGPKPDIISYSTNASW 394



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 46/249 (18%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+  +D A  LF ++ ++G+ P I+  N+II   C +  +D+A  + +K+    + P+
Sbjct: 220 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++++ID  CK   MD A  +  +M+E G + N +TY+ LI GY  S     +  V++
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----PDVVTYA------ 171
           +M    + P + + +  I  L K G   EA     C  D+ +L    PD+++Y+      
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEA----KCIFDSMVLKGPKPDIISYSTNASWV 395

Query: 172 --------------------------------ILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
                                           ILI  Y + G   +AM +++ M   G++
Sbjct: 396 CYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 455

Query: 200 PDGLLLSTL 208
           PD +  +T+
Sbjct: 456 PDTVTFATV 464



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L   +   G+EP+   Y T++ GYC   R+D+A+ +F  +    +KP S+ ++
Sbjct: 579 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 638

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY  ++ G  ++     A  + E++   
Sbjct: 639 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 698

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P++ TY+++I    K     EA
Sbjct: 699 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 758

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ S+ ++G   D  LL+ +
Sbjct: 759 DNLFISVEKSGHASDSRLLNHI 780



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 38/193 (19%)

Query: 46  AVQLFEKL---TCVQLKPNSI-TFTILID------------------------------- 70
           A++LF+++    C +  P +I T+ ILID                               
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 71  ---AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
               F K+G +D A  +F +M+E+G    ++  + +I    K + M  A  + ++M ++ 
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +YS++IDGLCK   M++A       ++    P+ +TY  LI GY  +G   E++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 188 QLYDSMLRNGIMP 200
           +++  M   G++P
Sbjct: 336 RVFKQMSSCGVIP 348



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ LID Y +         +   + +N + P+  SYS LI G  K G +++A   F   
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 236

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++  +LP ++    +I+  CK     +A  +   M+ +GI PD    S + D
Sbjct: 237 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288



 Score = 36.6 bits (83), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A   H  P + TY ILI  Y +  RP   + +   +L+NG+ PD    S +  +      
Sbjct: 167 ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEV 226

Query: 218 SQEHCI 223
            + HC+
Sbjct: 227 DKAHCL 232


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 35/247 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A ++F ++    +EPDI+TYN +  G+C    + E   L +++    L+PNS+T+ I
Sbjct: 568 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 627

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ---------------- 111
            I  FC+ G + +A ++F+ + EKG     V YS ++ GY  S                 
Sbjct: 628 AIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQG 687

Query: 112 -------------------NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
                              N++ A +V + M E+++ P+++SYS LI   C+ G M++A 
Sbjct: 688 NLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAH 747

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
             FH  +   L  DV+ Y IL+ GYCKAGR  EA QL+  M   GI PD +  + L D +
Sbjct: 748 LWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGH 807

Query: 213 LQSSGSQ 219
           L+ +  Q
Sbjct: 808 LKETLQQ 814



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 16/211 (7%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+I+Y+ +I  YC    +D+A   F  +    L  + I +TIL++ +CK GR+ +A  +
Sbjct: 725 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQL 784

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE----------------MCENNI 128
           F +M   G K +V+ Y+ L+DG+ K    +    + +E                M +  I
Sbjct: 785 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQI 844

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++  Y++LIDG CK   + EA   F   L   L PD   Y  LI GYC  G  ++A  
Sbjct: 845 EPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAED 904

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           L   M+  GI PD L  S L   +L+S   Q
Sbjct: 905 LLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 935



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 44/254 (17%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  LD A KL      +G  PD+  Y+ +I  YC +  L  AV  +E +    ++ N
Sbjct: 422 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETN 481

Query: 62  -----------------------------------SITFTILIDAFCKEGRMDDATMMFS 86
                                               + + I +D +CK G M++A  + +
Sbjct: 482 CHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 541

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
           +M   G   + + Y+CLI GY     M++A  V+EEM + NI P+IV+Y+IL  G CK G
Sbjct: 542 EMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 601

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI-------- 198
           L+ E         D  L P+ +TY I I G+C+ G  +EA  L++ +   GI        
Sbjct: 602 LVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 661

Query: 199 -MPDGLLLSTLADY 211
            M  G LLS   D+
Sbjct: 662 SMVCGYLLSGWTDH 675



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 101/198 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+  F +  D GL  D + YN  +  YC    ++EAV+L  ++    L P+ I +T LI 
Sbjct: 501 AIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLIS 560

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C +G M +A  +F +ML+   + ++VTY+ L  G+ KS  +   FD+ + M +  + P
Sbjct: 561 GYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEP 620

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++Y I I G C+ G + EA   F+   +  +    V Y+ ++ GY  +G    A  L+
Sbjct: 621 NSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLF 680

Query: 191 DSMLRNGIMPDGLLLSTL 208
             + R G + D    S L
Sbjct: 681 VRVARQGNLVDHFSCSKL 698



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 41/251 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +D AL+++ ++T+ G++PD   Y++ + G C   + D A  + +++   ++   
Sbjct: 352 LFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVE 411

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + +++D  CKE R+D+A  +      +G   +V  YS LI  Y K  N+ +A D YE
Sbjct: 412 AMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYE 471

Query: 122 EMCENNISPN--IVS---------------------------------YSILIDGLCKRG 146
            M  + I  N  IVS                                 Y+I +D  CK G
Sbjct: 472 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 531

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M EA+   +      L PD + Y  LI GYC  G    A Q+++ ML+  I PD     
Sbjct: 532 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPD----- 586

Query: 207 TLADYNLQSSG 217
            +  YN+ +SG
Sbjct: 587 -IVTYNILASG 596



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 51/253 (20%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF----------EKLTCV 56
           +L  A  LF  + ++G++   + Y++++CGY      D A  LF          +  +C 
Sbjct: 637 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCS 696

Query: 57  QL-------------------------KPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
           +L                          P+ I+++ LI  +C+ G MD A + F  M+++
Sbjct: 697 KLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 756

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G   +V+ Y+ L++GY K+  ++ A  ++ +M    I P++++Y++L+DG  K  L +  
Sbjct: 757 GLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGW 816

Query: 152 -----------LYAFHCAL-----DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
                      L A H  L     D  + PDV  Y +LI G CKA    EA +L+D ML+
Sbjct: 817 EGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQ 876

Query: 196 NGIMPDGLLLSTL 208
            G+ PD    + L
Sbjct: 877 KGLTPDAYAYTAL 889



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 4/211 (1%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           LIK C     + A + LF  +   G+ P + T+N ++         +  +  + ++ C Q
Sbjct: 278 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 337

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+  TF I+  +  +  ++D+A  ++++M E G K +   YS  + G         A+
Sbjct: 338 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 397

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            + +E+    +    ++Y++++DGLCK   ++EA             PDV  Y+ LIR Y
Sbjct: 398 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 457

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           CK G    A+  Y++M+ +GI  +  ++S L
Sbjct: 458 CKMGNLINAVDHYEAMVSHGIETNCHIVSYL 488



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYC--SLNRLDEAV-------------- 47
           K   L  A +LF Q+T+ G++PD+I Y  ++ G+   +L +  E +              
Sbjct: 774 KAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHN 833

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +L   +  +Q++P+   +T+LID  CK   + +A  +F +ML+KG   +   Y+ LI+GY
Sbjct: 834 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 893

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
                +  A D+ +EM +  I P+ +++S+L
Sbjct: 894 CSQGEISKAEDLLQEMIDKGIEPDELTFSVL 924



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 57/102 (55%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL   + D  +EPD+  Y  +I G C    L EA +LF+++    L P++  +T LI+ +
Sbjct: 834 KLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGY 893

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
           C +G +  A  +  +M++KG + + +T+S L     +S+ ++
Sbjct: 894 CSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 935



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 53/101 (52%)

Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
           CLI       ++++   ++  +C   + P++ ++++L+  + + G  E  L A++     
Sbjct: 277 CLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCF 336

Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
            L PDV T+AI+ R   +A +  EA+Q++  M   G+ PD 
Sbjct: 337 QLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDA 377


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P+++T+N+++ GYC +  ++EA  L + +  + ++PN
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D +CK GR+DDA  +F  ML KG K   V YS ++ G F+++   +A  ++ 
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 495

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +Y +++ GLC+    +EA          ++  D++T+ I+I    K G
Sbjct: 496 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 555

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+D++   G++P+
Sbjct: 556 RRQEAKELFDAISTYGLVPN 575



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F  + ++G+ PD +T+ T+I   C + RLD+A+  F  +  + + P+   +  
Sbjct: 276 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 335

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           LI   C  G +  A  + S+M+ K  P   V  +S +I+   K   +    D+ + M + 
Sbjct: 336 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 395

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+++ L++G C  G MEEA           + P+   Y  L+ GYCK GR  +A
Sbjct: 396 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 455

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + ++  ML  G+ P  +L S +
Sbjct: 456 LTVFRDMLHKGVKPTSVLYSII 477



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 37/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  ++ D G+ PD+ TY+ II G C    +D+A ++ E++     +PN
Sbjct: 93  LCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPN 152

Query: 62  SITFTILIDAFC-----------------------------------KEGRMDDATMMFS 86
           SIT+  LI  +                                    K GR ++A  +F 
Sbjct: 153 SITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFD 212

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQN--MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            M+ KGPK ++++YS ++ GY  + +  +    +++  M    I+PN   ++ILI+   +
Sbjct: 213 SMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYAR 272

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            G+M++A+  F    +  ++PD VT+A +I   C+ GR  +A+  ++ M+  G+ P
Sbjct: 273 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 328



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G+ P+   +N +I  Y     +D+A+ +FE +    + P+++TF  +I + C
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   Y CLI G      +  A ++  EM   +I P  V
Sbjct: 307 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            Y S +I+ LCK G + E        +     P+VVT+  L+ GYC  G   EA  L D+
Sbjct: 367 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 426

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   GI P+  +  TL D
Sbjct: 427 MASIGIEPNCYIYGTLVD 444



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 37/239 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+ + G  P+ ITYN++I GY      +E+V++F++++   + P 
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN--------- 112
                  I A  K GR ++A  +F  M+ KGPK ++++YS ++ GY  + +         
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247

Query: 113 ----------------------------MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                                       M  A  ++E+M    + P+ V+++ +I  LC+
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G +++AL+ F+  +D  + P    Y  LI+G C  G   +A +L   M+   I P G+
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 111/215 (51%), Gaps = 10/215 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+  +D A  LF ++ ++G+ P I+  N+II   C +  +D+A  + +K+    + P+
Sbjct: 58  FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 117

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++++ID  CK   MD A  +  +M+E G + N +TY+ LI GY  S     +  V++
Sbjct: 118 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 177

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----PDVVTYAILIRGY 177
           +M    + P + + +  I  L K G   EA     C  D+ +L    PD+++Y+ ++ GY
Sbjct: 178 QMSSCGVIPTVDNCNSFIHALFKHGRTNEA----KCIFDSMVLKGPKPDIISYSTMLHGY 233

Query: 178 CKAGRP--TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A      +   +++ ML  GI P+  + + L +
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 268



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L + G+L   GL PD  +Y ++I G+     +D+A  LF ++    + P  +    +
Sbjct: 31  DLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSI 89

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK   MD A  +  KM++ G   ++ TYS +IDG  KS+ M  A  V E+M E   
Sbjct: 90  IKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT 149

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN ++Y+ LI G    G+  E++  F       ++P V      I    K GR  EA  
Sbjct: 150 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 209

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM+  G  PD +  ST+
Sbjct: 210 IFDSMVLKGPKPDIISYSTM 229



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L   +   G+EP+   Y T++ GYC   R+D+A+ +F  +    +KP S+ ++
Sbjct: 416 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 475

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY  ++ G  ++     A  + E++   
Sbjct: 476 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 535

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P++ TY+++I    K     EA
Sbjct: 536 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 595

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ S+ ++G   D  LL+ +
Sbjct: 596 DNLFISVEKSGHASDSRLLNHI 617



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 35/185 (18%)

Query: 51  EKLTCVQLKPNSI-TFTILID----------------------------------AFCKE 75
           ++  C +  P +I T+ ILID                                   F K+
Sbjct: 2   DRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD 61

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           G +D A  +F +M+E+G    ++  + +I    K + M  A  + ++M ++ I+P++ +Y
Sbjct: 62  GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 121

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           S++IDGLCK   M++A       ++    P+ +TY  LI GY  +G   E+++++  M  
Sbjct: 122 SLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSS 181

Query: 196 NGIMP 200
            G++P
Sbjct: 182 CGVIP 186



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ LID Y +         +   + +N + P+  SYS LI G  K G +++A   F   
Sbjct: 16  TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 74

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++  +LP ++    +I+  CK     +A  +   M+ +GI PD    S + D
Sbjct: 75  MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126



 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A   H  P + TY ILI  Y +  RP   + +   +L+NG+ PD    S +  +      
Sbjct: 5   ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEV 64

Query: 218 SQEHCI 223
            + HC+
Sbjct: 65  DKAHCL 70


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 110/198 (55%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD AL LF ++  RG +P ++TYN ++   CS  R+  A +LF K+T     P+S 
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T++ L++   K GR+++A  +F +M+++G   ++V Y+ L+    K+ NM   + + +EM
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+  S++ ++D L K    + A   F   +++   PD+++Y ILI  Y + G  
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361

Query: 184 TEAMQLYDSMLRNGIMPD 201
            +A Q+ + M+  G +P+
Sbjct: 362 AQARQMLEEMVEAGFIPE 379



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 111/207 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +   LD+A+++F ++  +G EPD  TY  ++       R+ EA   F+ +    L PN  
Sbjct: 112 RSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIP 171

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L+DAF K G++D A  +F++M  +G + +VVTY+ L+D    +  + +A  ++ +M
Sbjct: 172 TYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM 231

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +  SP+  +YS L++GL K G +EEA   F   +D  +  D+V Y  L+    KAG  
Sbjct: 232 TGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNM 291

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               +L   M R G  PD    +T+ D
Sbjct: 292 DRVWKLMKEMSRKGFHPDAFSFNTIMD 318



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 4/213 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L+     + A  ++ +L  +G + D   YN +I  +    +LD A+++F ++     +P
Sbjct: 74  ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           +  T+  L++A  K GR+ +A   F  MLE+G   N+ TY+ L+D + K   +  A  ++
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            EM      P++V+Y+IL+D LC  G +  A   FH    +   PD  TY+ L+ G  K+
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253

Query: 181 GRPTEAMQLYDSMLRNGIMPD----GLLLSTLA 209
           GR  EA +++  M+  G+  D      LL+TLA
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLA 286



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 107/209 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A   F  + +RGL P+I TYN ++  +  + +LD A+ LF ++     +P+
Sbjct: 145 LGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ IL+DA C  GR+  A  +F KM   G   +  TYS L++G  KS  ++ A  V+ 
Sbjct: 205 VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFR 264

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM +  ++ ++V+Y+ L+  L K G M+               PD  ++  ++    KA 
Sbjct: 265 EMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKAN 324

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +P  A +++  M+ +G  PD +  + L D
Sbjct: 325 KPDAAREVFARMVESGCKPDLISYNILID 353



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 102/202 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A K+F ++ DRG+  D++ YN+++        +D   +L ++++     P+
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + +F  ++DA  K  + D A  +F++M+E G K ++++Y+ LID Y +  +   A  + E
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P   +Y+ LI  L   G ++EA             PDVVTY  L+    K G
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429

Query: 182 RPTEAMQLYDSMLRNGIMPDGL 203
               A +L+  M   G+ PD L
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTL 451



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 97/192 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K  ++D   KL  +++ +G  PD  ++NTI+      N+ D A ++F ++     KP+
Sbjct: 285 LAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPD 344

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            I++ ILID++ + G    A  M  +M+E G      TY+ LI        +  AF V E
Sbjct: 345 LISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLE 404

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM      P++V+Y+ L+D L KRG  + A   F    D  + PD ++YA+ I G     
Sbjct: 405 EMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDD 464

Query: 182 RPTEAMQLYDSM 193
           R  EA+ L+  M
Sbjct: 465 RLDEALVLFKDM 476



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 1/212 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF Q       P +  +  +I    +    + A  +++KL     + +   + +LI 
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F + G++D A  MF +M  KG + +  TY  L++   K+  ++ A   ++ M E  ++P
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           NI +Y++L+D   K G ++ AL  F         P VVTY IL+   C AGR   A +L+
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             M  +G  PD    STL +  L  SG  E  
Sbjct: 229 HKMTGDGCSPDSYTYSTLVN-GLGKSGRVEEA 259



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 2/190 (1%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R L P+ +    +I  Y   N+  +A  LF +       P    FT LID     G  + 
Sbjct: 26  RPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFER 83

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
           A +++ K+++KG + +   Y+ LI  + +S  + SA +++ EM      P+  +Y  L++
Sbjct: 84  AELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVN 143

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            L K G ++EA   F   L+  L P++ TY +L+  + K G+   A+ L+  M R G  P
Sbjct: 144 ALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQP 203

Query: 201 DGLLLSTLAD 210
             +  + L D
Sbjct: 204 SVVTYNILLD 213



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++  ++ + G  P+  TYN++I    +  ++DEA  + E++     +P+ +T+  L+D
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
              K G    A  +F +M +KG + + ++Y+  IDG      +  A  ++++M       
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV 483

Query: 131 NIVSYSILIDGLCKRGLME 149
           +   Y ILI    + G  E
Sbjct: 484 DKAMYRILIRAAHRAGDTE 502



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           ML K      A +LF Q+ D+G+EPD ++Y   I G    +RLDEA+ LF+ +  V    
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV 483

Query: 61  NSITFTILIDAFCKEG 76
           +   + ILI A  + G
Sbjct: 484 DKAMYRILIRAAHRAG 499



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 76  GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
           G +D    +  +M+ +G      T   LI  Y +      AFD++ +      SP + ++
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
           + LID L   G  E A   +   +      D   Y +LIR + ++G+   AM+++  M  
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 196 NGIMPD----GLLLSTLA 209
            G  PD    G L++ L 
Sbjct: 129 KGSEPDEYTYGFLVNALG 146


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P+++T+N+++ GYC +  ++EA  L + +  + ++PN
Sbjct: 538 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 597

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D +CK GR+DDA  +F  ML KG K   V YS ++ G F+++   +A  ++ 
Sbjct: 598 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 657

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +Y +++ GLC+    +EA          ++  D++T+ I+I    K G
Sbjct: 658 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 717

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+D++   G++P+
Sbjct: 718 RRQEAKELFDAISTYGLVPN 737



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F  + ++G+ PD +T+ T+I   C + RLD+A+  F  +  + + P+   +  
Sbjct: 438 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 497

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           LI   C  G +  A  + S+M+ K  P   V  +S +I+   K   +    D+ + M + 
Sbjct: 498 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 557

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+++ L++G C  G MEEA           + P+   Y  L+ GYCK GR  +A
Sbjct: 558 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 617

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + ++  ML  G+ P  +L S +
Sbjct: 618 LTVFRDMLHKGVKPTSVLYSII 639



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT-FT 66
           LD AL  F  + D G+ P    Y  +I G C+   L +A +L  ++    + P  +  F+
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CKEGR+ +   +   M++ G + NVVT++ L++GY    NM+ AF + + M   
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN   Y  L+DG CK G +++AL  F   L   + P  V Y+I++ G  +A R T A
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 187 MQLYDSMLRNG 197
            +++  M+ +G
Sbjct: 653 KKMFHEMIESG 663



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 37/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  ++ D G+ PD+ TY+ II G C    +D+A ++ E++     +PN
Sbjct: 255 LCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPN 314

Query: 62  SITFTILIDAFC-----------------------------------KEGRMDDATMMFS 86
           SIT+  LI  +                                    K GR ++A  +F 
Sbjct: 315 SITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFD 374

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQN--MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            M+ KGPK ++++YS ++ GY  + +  +    +++  M    I+PN   ++ILI+   +
Sbjct: 375 SMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYAR 434

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            G+M++A+  F    +  ++PD VT+A +I   C+ GR  +A+  ++ M+  G+ P
Sbjct: 435 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 490



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G+ P+   +N +I  Y     +D+A+ +FE +    + P+++TF  +I + C
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 468

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   Y CLI G      +  A ++  EM   +I P  V
Sbjct: 469 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            Y S +I+ LCK G + E        +     P+VVT+  L+ GYC  G   EA  L D+
Sbjct: 529 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 588

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   GI P+  +  TL D
Sbjct: 589 MASIGIEPNCYIYGTLVD 606



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 37/239 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+ + G  P+ ITYN++I GY      +E+V++F++++   + P 
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN--------- 112
                  I A  K GR ++A  +F  M+ KGPK ++++YS ++ GY  + +         
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 409

Query: 113 ----------------------------MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                                       M  A  ++E+M    + P+ V+++ +I  LC+
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G +++AL+ F+  +D  + P    Y  LI+G C  G   +A +L   M+   I P G+
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+  +D A  LF ++ ++G+ P I+  N+II   C +  +D+A  + +K+    + P+
Sbjct: 220 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 279

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++++ID  CK   MD A  +  +M+E G + N +TY+ LI GY  S     +  V++
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL----PDVVTYAILIRGY 177
           +M    + P + + +  I  L K G   EA     C  D+ +L    PD+++Y+ ++ GY
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEA----KCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 178 CKAGRP--TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A      +   +++ ML  GI P+  + + L
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 428



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L + G+L   GL PD  +Y ++I G+     +D+A  LF ++    + P  +    +
Sbjct: 193 DLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSI 251

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK   MD A  +  KM++ G   ++ TYS +IDG  KS+ M  A  V E+M E   
Sbjct: 252 IKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT 311

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN ++Y+ LI G    G+  E++  F       ++P V      I    K GR  EA  
Sbjct: 312 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 371

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM+  G  PD +  ST+
Sbjct: 372 IFDSMVLKGPKPDIISYSTM 391



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L   +   G+EP+   Y T++ GYC   R+D+A+ +F  +    +KP S+ ++
Sbjct: 578 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 637

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY  ++ G  ++     A  + E++   
Sbjct: 638 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 697

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P++ TY+++I    K     EA
Sbjct: 698 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 757

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ S+ ++G   D  LL+ +
Sbjct: 758 DNLFISVEKSGHASDSRLLNHI 779



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 38/193 (19%)

Query: 46  AVQLFEKL---TCVQLKPNSI-TFTILID------------------------------- 70
           A++LF+++    C +  P +I T+ ILID                               
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 71  ---AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
               F K+G +D A  +F +M+E+G    ++  + +I    K + M  A  + ++M ++ 
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +YS++IDGLCK   M++A       ++    P+ +TY  LI GY  +G   E++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 188 QLYDSMLRNGIMP 200
           +++  M   G++P
Sbjct: 336 RVFKQMSSCGVIP 348



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ LID Y +         +   + +N + P+  SYS LI G  K G +++A   F   
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 236

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++  +LP ++    +I+  CK     +A  +   M+ +GI PD    S + D
Sbjct: 237 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288



 Score = 36.6 bits (83), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A   H  P + TY ILI  Y +  RP   + +   +L+NG+ PD    S +  +      
Sbjct: 167 ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEV 226

Query: 218 SQEHCI 223
            + HC+
Sbjct: 227 DKAHCL 232


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 103/193 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KL   +  +G  P+ +TYNT+I G C   +LD+A+ L EK+   +  PN
Sbjct: 254 LSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPN 313

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I+   K+ R +D   +   M E+G KAN   YS LI G FK    ++A  +++
Sbjct: 314 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK 373

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    PN+V Y   IDGLC+    +EA       L    LP+  TY+ L++G+ K G
Sbjct: 374 EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 433

Query: 182 RPTEAMQLYDSML 194
              +A+ ++  M+
Sbjct: 434 DSQKAILVWKEMM 446



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 4/205 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A++L+ ++ ++G +P+++ Y   I G C   + DEA  + +++      PN
Sbjct: 359 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 418

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++ L+  F K+G    A +++ +M+ +  + NVV  S L++G  +S  ++ A  V+ 
Sbjct: 419 AFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT 478

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL---YAFHCALDNHLLPDVVTYAILIRGYC 178
            M    + P++V+YS +I GLC  G +++ L   Y   C  +    PDVVTY IL    C
Sbjct: 479 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ-EPKSRPDVVTYNILFNALC 537

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGL 203
           +    T A+ L +SML  G  PD L
Sbjct: 538 RQDNLTRAIDLLNSMLDEGCDPDSL 562



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 107/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   +  + +   + +RG + +   Y+++I G     + + AV+L++++     KPN
Sbjct: 324 LVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPN 383

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +   ID  C++ + D+A  +  +ML KG   N  TYS L+ G+FK  + + A  V++
Sbjct: 384 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 443

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++  N+V  S+L++GLC+ G + EAL  +   L   L PDVV Y+ +I+G C  G
Sbjct: 444 EMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVG 503

Query: 182 RPTEAMQLYDSM 193
              + ++L+  M
Sbjct: 504 SVDKGLKLFYEM 515



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 104/201 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL L  ++      P+ +TY TII G     R ++ V +   +     K N   ++ 
Sbjct: 295 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 354

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    KEG+ ++A  ++ +M EKG K NVV Y   IDG  + +    A D+ +EM    
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +YS L+ G  K+G  ++A+  +   +   +  +VV  ++L+ G C++GR  EA+
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++  ML  G+ PD +  S++
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSM 495



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 4/226 (1%)

Query: 1   MLIKECHLDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           ++I+E     A K +  +     +G +P+++TYN II   C L ++D AV  F ++    
Sbjct: 145 VIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 204

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             P+  T++ L++  CKE R+D+A  +  +M  +G   N VT++ LID   K+ ++  A 
Sbjct: 205 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 264

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            + + M      PN V+Y+ LI GLC +G +++AL      + +  +P+ VTY  +I G 
Sbjct: 265 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 324

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            K  R  + + +  SM   G   +  + S+L    L   G  E+ +
Sbjct: 325 VKQRRAEDGVHILMSMEERGQKANEYIYSSLIS-GLFKEGKSENAV 369



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F ++  +   PD+ TY+T++ G C   R+DEAV L +++      PN
Sbjct: 184 LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 243

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +LIDA  K G +  A  +   M  KG   N VTY+ LI G      +  A  + E
Sbjct: 244 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE 303

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +   PN V+Y  +I+GL K+   E+ ++      +     +   Y+ LI G  K G
Sbjct: 304 KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 363

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A++L+  M   G  P+ ++     D
Sbjct: 364 KSENAVRLWKEMAEKGCKPNVVVYGAFID 392



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 23/169 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK--PNSIT 64
            L  AL ++  +   GL+PD++ Y+++I G C +  +D+ ++LF ++ C + K  P+ +T
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG---------------------PKANVVTYSCL 103
           + IL +A C++  +  A  + + ML++G                     P+   +    L
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 588

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           +    K +   SA  + EEM    + P   ++S +I   CK   + E +
Sbjct: 589 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 23/200 (11%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ ++ ++  + +  +++  + ++ G C   RL EA+ ++  +    LKP+ + ++ +I 
Sbjct: 438 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 497

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
             C  G +D    +F +M  + PK+  +VVTY+ L +   +  N+  A D+   M +   
Sbjct: 498 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGC 557

Query: 129 SPNIVSYSILI-----------DG----------LCKRGLMEEALYAFHCALDNHLLPDV 167
            P+ ++ +I +           DG          L KR     AL      L   L P+ 
Sbjct: 558 DPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEP 617

Query: 168 VTYAILIRGYCKAGRPTEAM 187
            T++ +I+  CK  R  E +
Sbjct: 618 STWSRVIQRTCKPKRIRETI 637


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 106/188 (56%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
           +P+++TY  ++ G C  +++ +A  L E +     +PN+I +  LID FCK  ++D+A  
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +F KM+E G   NV TYS LID  FK + +     V  +M EN+ +PNIV Y+ +IDGL 
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K    +EA        +    P+VVTY  +I G+ KAG+  + ++L+  M   G  P+ +
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 204 LLSTLADY 211
             + L ++
Sbjct: 822 TYTVLINH 829



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A K+  ++   G  PD  TY+ +I   C+ +R++ A  LF+++    + P+  T+TI
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID F K G +  A     +M+  G +  VVTY+ LI  Y K++ +  A +++E M    
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 128 ISPNIVSYSILIDGLCKRGLMEEA--LYA------------FHCALDNHLL--PDVVTYA 171
             PN+++Y+ LIDG CK G +E+A  +YA             +  + N++   P+VVTY 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            L+ G CKA +  +A  L ++M  +G  P+ ++   L D
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 21/225 (9%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +IK+ H         ++   G EP ++TY T+I  Y    ++  A +LFE +      PN
Sbjct: 539 IIKQAH-----NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPN 593

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKML----------------EKGPKANVVTYSCLID 105
            IT+T LID +CK G ++ A  ++++M                     K NVVTY  L+D
Sbjct: 594 VITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVD 653

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
           G  K+  +K A D+ E M  +   PN + Y  LIDG CK   ++EA   FH  +++   P
Sbjct: 654 GLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNP 713

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +V TY+ LI    K  R    +++   ML N   P+ ++ + + D
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMID 758



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 16/220 (7%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  LF ++   G+ PD+ TY  +I  +     + +A    +++     +P  +T+T
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM--- 123
            LI A+ K  ++  A  +F  M+ KG   NV+TY+ LIDGY KS N++ A  +Y  M   
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 124 -----------CENNIS--PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
                       +NN++  PN+V+Y  L+DGLCK   +++A         +   P+ + Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             LI G+CKA +  EA +++  M+ +G  P+    S+L D
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 89/172 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G EP+ I Y+ +I G+C   +LDEA ++F K+      PN  T++ LID   K+ R+D  
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 734

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             + SKMLE     N+V Y+ +IDG  K      A+ +   M E    PN+V+Y+ +IDG
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
             K G +++ L  F         P+ VTY +LI   C  G   EA  L + M
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 5/218 (2%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A ++F ++ + G  P++ TY+++I       RLD  +++  K+      PN +
Sbjct: 692 KAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            +T +ID   K  + D+A  +   M EKG K NVVTY+ +IDG+ K+  +    +++ EM
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD-VVTYAILIRGYCKAGR 182
                +PN V+Y++LI+  C  G ++EA YA    +     P  V +Y  +I GY +   
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEA-YALLEEMKQTYWPKHVSSYCKVIEGYKR--E 868

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              ++ L + + +NG  P  LL   L D N   +G  E
Sbjct: 869 FILSLGLLEEVEKNGSAPIILLYKVLID-NFVKAGRLE 905



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 4/202 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A KL   + ++G +P+++TY  +I G+    ++D+ ++LF ++      PN
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LI+  C  G +D+A  +  +M +     +V +Y  +I+GY   +    +  + E
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLE 877

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL--LPDVVTYAILIRGYCK 179
           E+ +N  +P I+ Y +LID   K G +E AL      +   +        Y  LI  +  
Sbjct: 878 EVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSY 937

Query: 180 AGRPTEAMQLYDSMLRNGIMPD 201
           A +   A +L+  M+R+G++PD
Sbjct: 938 ASKIGHAFELFYDMIRDGVIPD 959



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 12/198 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD  LK+  ++ +    P+I+ Y  +I G   + + DEA +L   +     KPN
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T +ID F K G++D    +F +M  KG   N VTY+ LI+    + ++  A+ + E
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLE 844

Query: 122 EMCENNISPNIVSYSILIDGLCKR-----GLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           EM +     ++ SY  +I+G  +      GL+EE          N   P ++ Y +LI  
Sbjct: 845 EMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEE-------VEKNGSAPIILLYKVLIDN 897

Query: 177 YCKAGRPTEAMQLYDSML 194
           + KAGR   A++L+  ++
Sbjct: 898 FVKAGRLEVALELHKEVI 915



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 26  DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
           +++++   +CG+    + ++A ++  ++      P++ T++ +I   C   R+++A  +F
Sbjct: 456 NVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +M   G   +V TY+ LID + K+  +K A +  +EM  +   P +V+Y+ LI    K 
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +  A   F   +     P+V+TY  LI GYCK+G   +A Q+Y  M  +  +PD
Sbjct: 573 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 49/255 (19%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           ++   +   G  P    +N+++  YC  +    A +L +K+   + KP  + + ILI + 
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 73  CKEGRMDD------ATMMFSKMLEKGP---KANVVTYSCLIDGYFK-------------- 109
           C  G +        A   +++ML  G    K NVV+++  + G+ K              
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 110 ------------------SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
                             +  +++AF +++EM    + P++ +Y+ILID   K G++++A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 152 LYAFHCALDNHLL----PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
               H  LD  +     P VVTY  LI  Y KA + + A +L++ M+  G  P+ +  + 
Sbjct: 544 ----HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 208 LADYNLQSSGSQEHC 222
           L D   +S   ++ C
Sbjct: 600 LIDGYCKSGNIEKAC 614



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P+ I YN +I G C  +  +EA+    ++      PN  T+ IL+     + ++     +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S M+ +G   +   ++ L+  Y KS +   A+ + ++M +    P  V Y+ILI  +C 
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425

Query: 145 RGLM-----------------------------------------EEALYAFHCALDNHL 163
            G +                                         E+A    H  + N  
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485

Query: 164 LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +PD  TY+ +I   C A R   A  L+  M   G++PD    + L D
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 7/197 (3%)

Query: 1   MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
           +LI++C      + AL+  G+L D G +P  +TYN ++  +   ++LD A  +  +++ +
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
            L  +  T      A CK G+  +A  +  K   +    N + Y+ +I G  ++   + A
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEA 327

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
            D    M   +  PN+ +Y IL+ G   +  +          +     P    +  L+  
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 177 YCKAGRPTEAMQLYDSM 193
           YCK+   + A +L   M
Sbjct: 388 YCKSDDFSYAYKLLKKM 404


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 115/201 (57%), Gaps = 12/201 (5%)

Query: 6   CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
             LD AL+L G++   G+ P++I Y+ ++ GYC   R  +  ++FE+++ + ++P+ I F
Sbjct: 164 AELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMF 223

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           T  ID  CK+GR+  A  +   M+++G + NVVTY+ LI+   K  +++ A  +  EM +
Sbjct: 224 TGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDD 283

Query: 126 NNISPNIVSYSILIDGLC-------KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
             ++P++V+Y+ LI GL          GL+EE +       D  + PDVVT+  +I G C
Sbjct: 284 KGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQG-----DTLVEPDVVTFNSVIHGLC 338

Query: 179 KAGRPTEAMQLYDSMLRNGIM 199
           K GR  +A+ + + M   G M
Sbjct: 339 KIGRMRQAISVREMMAERGCM 359



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 97/185 (52%)

Query: 24  EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
            P+ ++Y  ++ G C+  R DEAV L   +    ++ + +T+  LI   C    +D A  
Sbjct: 112 RPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALE 171

Query: 84  MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +  +M   G   NV+ YSCL+ GY +S   +    V+EEM    + P+++ ++  ID LC
Sbjct: 172 LLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLC 231

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K+G + +A+      +   L P+VVTY +LI   CK G   EA+ L + M   G+ PD +
Sbjct: 232 KKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVV 291

Query: 204 LLSTL 208
             +TL
Sbjct: 292 TYNTL 296



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 2/195 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A+ L   +   G+  D++TY T+I G C    LD A++L  ++    + PN I ++ L
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +  +C+ GR  D + +F +M   G + +V+ ++  ID   K   +  A  V + M +  +
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGL 251

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN+V+Y++LI+ LCK G + EAL   +   D  + PDVVTY  LI G         AM 
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMG 311

Query: 189 LYDSMLRNGIM--PD 201
           L + M++   +  PD
Sbjct: 312 LLEEMIQGDTLVEPD 326



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A+ +   + +RG   +++TYN +I G+  +++++ A+ L  +L    L+P+
Sbjct: 337 LCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPD 396

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S T++ILI+ F K   +D A M    M ++G +A +  Y  L+    +   M+ A  ++ 
Sbjct: 397 SFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFN 456

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM + N   + V+YS ++ G CK G ++ A       LD  L PD VTY+ILI  + K G
Sbjct: 457 EM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLG 515

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              EA ++   M  +G +PD  +  +L
Sbjct: 516 DLEEAERVLKQMAASGFVPDVAVFDSL 542



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 3/204 (1%)

Query: 7   HLDAALKLFGQLT--DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
            +D A+ L  ++   D  +EPD++T+N++I G C + R+ +A+ + E +       N +T
Sbjct: 305 EMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVT 364

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +  LI  F +  +++ A  + S+++  G + +  TYS LI+G+ K   +  A      M 
Sbjct: 365 YNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMT 424

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
           +  I   +  Y  L+  LC+ G+ME+A+  F+  +D +   D V Y+ ++ G CK+G   
Sbjct: 425 QRGIRAELFHYIPLLAALCQLGMMEQAMVLFN-EMDMNCGLDAVAYSTMMYGACKSGDIK 483

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
            A QL   ML  G+ PD +  S L
Sbjct: 484 AAKQLLQDMLDEGLAPDAVTYSIL 507



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 26  DIITYNTIICGYCSLN-RLDEAVQLFEKLTC---VQLKPNSITFTILIDAFCKEGRMDDA 81
           D ++YN ++   C     L +A+ L   ++       +PN++++T+++   C   R D+A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             +   M   G +A+VVTY  LI G   +  +  A ++  EMC + + PN++ YS L+ G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            C+ G  ++    F       + PDV+ +   I   CK GR  +A+++ D M++ G+ P+
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+ L  +L   GLEPD  TY+ +I G+  L  +D A      +T   ++     + 
Sbjct: 377 KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYI 436

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+ A C+ G M+ A ++F++M +     + V YS ++ G  KS ++K+A  + ++M + 
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDE 495

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P+ V+YSILI+   K G +EEA         +  +PDV  +  LI+GY   G+  + 
Sbjct: 496 GLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKI 555

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + L   M    +  D   + TL
Sbjct: 556 LDLIHEMRAKNVAIDPKFICTL 577



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 91/178 (51%), Gaps = 7/178 (3%)

Query: 40  LNRLDEAVQLFEKLTCVQLKPN---SITFTILIDAFCKEG-RMDDATMMFSKM-LEKGPK 94
           LNR   A  + E  + +   P+   ++++ I++ A C+ G  +  A  + + M  E  P 
Sbjct: 51  LNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPA 110

Query: 95  A--NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           A  N V+Y+ ++ G   S+    A  +   M  + +  ++V+Y  LI GLC    ++ AL
Sbjct: 111 ARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGAL 170

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
                   + + P+V+ Y+ L+RGYC++GR  +  ++++ M R G+ PD ++ +   D
Sbjct: 171 ELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFID 228



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   + AA +L   + D GL PD +TY+ +I  +  L  L+EA ++ +++      P+  
Sbjct: 478 KSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVA 537

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEK 91
            F  LI  +  EG+++    +  +M  K
Sbjct: 538 VFDSLIKGYSAEGQINKILDLIHEMRAK 565


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 36/251 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   + AA+++F  +  RGL P+ + Y+ +I G C   ++D A+++  ++      P+
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA----- 116
           +IT+ +LID  CK G ++ A   F +MLE G K +V TY+ LI G+ K+ N  +A     
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255

Query: 117 ---------FDVY----------------------EEMCENNISPNIVSYSILIDGLCKR 145
                     D++                      E++  N  +P I +Y+ L++GLCK 
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +EEA+      +DN   PDVVTY  LI G  K  R  EA +L+  M   G+  D +  
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 206 STLADYNLQSS 216
           + L    LQ+ 
Sbjct: 376 TALIRELLQTG 386



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 102/192 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A KLF ++  RGL  D + Y  +I       ++ +A  +++ +T     P+
Sbjct: 347 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + +ID   K GR+  A  +F  M  +G   N V YS LI G  K++ M  A ++  
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +   +P+ ++Y+ILIDGLCK G +E A   F   L+    PDV TY ILI G+CKAG
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526

Query: 182 RPTEAMQLYDSM 193
               A  ++D M
Sbjct: 527 NTDAACGVFDDM 538



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ L  ++ D G  PD++TY ++I G     R  EA +LF+++    L  +
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +T LI    + G++  A+ ++  M   G   +VVT S +IDG  K+  + +A  +++
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN V YS LI GLCK   M+ AL            PD +TY ILI G CK+G
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
               A   +D ML  G  PD      +  YN+  SG
Sbjct: 492 DVEAARAFFDEMLEAGCKPD------VYTYNILISG 521



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 6/216 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A+ L  ++ D G  PD++TY ++I G     R  EA +LF+++    L  +
Sbjct: 31  LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 90

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ +T LI    + G++  A+ ++  M   G   +VVT S +IDG  K+  + +A  +++
Sbjct: 91  TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 150

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    ++PN V YS LI GLCK   M+ AL            PD +TY +LI G CK+G
Sbjct: 151 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSG 210

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
               A   +D ML  G  PD      +  YN+  SG
Sbjct: 211 DVEAARAFFDEMLEAGCKPD------VYTYNILISG 240



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 1/219 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A+ L  ++T  G  P I TYN ++ G C + RL+EA+ L  K+      P+
Sbjct: 277 LAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 336

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T LID   KE R  +A  +F +M  +G   + V Y+ LI    ++  +  A  VY+
Sbjct: 337 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK 396

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  +   P++V+ S +IDGL K G +  A+  F       L P+ V Y+ LI G CKA 
Sbjct: 397 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 456

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   A+++   M +    PD +  + L D  L  SG  E
Sbjct: 457 KMDCALEMLAQMKKAFCTPDTITYNILID-GLCKSGDVE 494



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 1/214 (0%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A+ L  ++T  G  P I TYN ++ G C + RL+EA+ L  K+      P+ +T+T
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID   KE R  +A  +F +M  +G   + V Y+ LI    ++  +  A  VY+ M  +
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++V+ S +IDGL K G +  A+  F       L P+ V Y+ LI G CKA +   A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +++   M +    PD +  + L D  L  SG  E
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLID-GLCKSGDVE 213



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 36/245 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A  ++  +T  G  PD++T +T+I G     R+  AV++F+ +    L PN
Sbjct: 101 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 160

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LI   CK  +MD A  M ++M +     + +TY+ LIDG  KS ++++A   ++
Sbjct: 161 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFD 220

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-------CALDNHL----------- 163
           EM E    P++ +Y+ILI G CK G  + A ++         C +D H            
Sbjct: 221 EMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKN 280

Query: 164 ------------------LPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                              P + TY  L+ G CK GR  EA+ L   ++ NG  PD +  
Sbjct: 281 KKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 340

Query: 206 STLAD 210
           ++L D
Sbjct: 341 TSLID 345



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 36/243 (14%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN-------------------- 41
           L K   ++AA   F ++ + G +PD+ TYN +I G+C                       
Sbjct: 206 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTI 265

Query: 42  ----------------RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
                           +++EAV L EK+T     P   T+  L++  CK GR+++A  + 
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 325

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            K+++ G   +VVTY+ LIDG  K +    A+ +++EM    ++ + V Y+ LI  L + 
Sbjct: 326 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQT 385

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G + +A   +     +  +PDVVT + +I G  KAGR   A++++ SM   G+ P+ ++ 
Sbjct: 386 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 445

Query: 206 STL 208
           S L
Sbjct: 446 SAL 448



 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 1/211 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE     A KLF ++  RGL  D + Y  +I       ++ +A  +++ +T     P+
Sbjct: 66  LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 125

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + +ID   K GR+  A  +F  M  +G   N V YS LI G  K++ M  A ++  
Sbjct: 126 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 185

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +   +P+ ++Y++LIDGLCK G +E A   F   L+    PDV TY ILI G+CKAG
Sbjct: 186 QMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 245

Query: 182 RPTEAMQ-LYDSMLRNGIMPDGLLLSTLADY 211
               A   L      NG   D    + + D+
Sbjct: 246 NTDAASHSLAQETTINGCTIDIHTYTAIVDW 276



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 103/196 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   +  A  ++  +T  G  PD++T +T+I G     R+  AV++F+ +    L PN
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + ++ LI   CK  +MD A  M ++M +     + +TY+ LIDG  KS ++++A   ++
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 501

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    P++ +Y+ILI G CK G  + A   F     +    +VVTY  LI G CK  
Sbjct: 502 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRR 561

Query: 182 RPTEAMQLYDSMLRNG 197
           + T+A   +  M   G
Sbjct: 562 QLTKASLYFQHMKERG 577


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 111/204 (54%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ A  +   +  + + P+++TY+T+I GY  L   +EA+ L+  +    ++P+ +++ 
Sbjct: 355 QMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYN 414

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID + K GR DDA      M   G KA+VVTY+ LID Y K    K A  ++++M   
Sbjct: 415 TLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAE 474

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + PN+++YS LID   K G+ ++A   F       L PDVV Y+ LI   CK G   +A
Sbjct: 475 GLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDA 534

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M + GI P+ +  ++L D
Sbjct: 535 VVLLQEMTQAGIQPNIVTYNSLID 558



 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 2/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL-DEAVQLFEKLTCVQLKPNSITFT 66
           L  AL +F ++   G+EPD IT+N++I   CS   L +++ ++F ++    ++ +  T+ 
Sbjct: 286 LKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYN 344

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LIDA CK G+M+ A  + S M  K    NVVTYS +IDGY K    + A  +Y +M E+
Sbjct: 345 TLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES 404

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+ VSY+ LID   K G  ++AL A        L  DVVTY  LI  Y K G+  +A
Sbjct: 405 GVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 464

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             L+D M   G++P+ L  S L D
Sbjct: 465 AGLFDKMKAEGLVPNVLTYSALID 488



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 75/203 (36%), Positives = 117/203 (57%), Gaps = 5/203 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           ALK+F  +   G +P++ITYNTII  CG   ++ L +A+ +FE++    ++P+ ITF  L
Sbjct: 253 ALKVFQAMKKAGCKPNLITYNTIIDACGKGGVD-LKKALDIFEEMQKEGVEPDRITFNSL 311

Query: 69  IDAFCKEGRM-DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           I A C  G + +D+  +F++M  +G + ++ TY+ LID   K   M+ A  +   M   N
Sbjct: 312 I-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKN 370

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISPN+V+YS +IDG  K G  EEA+  +H   ++ + PD V+Y  LI  Y K GR  +A+
Sbjct: 371 ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
                M R G+  D +  + L D
Sbjct: 431 TACKDMERVGLKADVVTYNALID 453



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/175 (36%), Positives = 100/175 (57%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            + A+ L+  + + G+ PD ++YNT+I  Y  L R D+A+   + +  V LK + +T+  
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA+ K+G+  DA  +F KM  +G   NV+TYS LID Y K+   + A  ++ E     
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           + P++V YS LID  CK GL+E+A+          + P++VTY  LI  Y + G+
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 3/205 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL +F +    G   ++  Y+ ++  Y    R  EA+++F+ +     KPN IT+  
Sbjct: 215 VEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 274

Query: 68  LIDAFCKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +IDA C +G +D   A  +F +M ++G + + +T++ LI    +    + +  V+ EM  
Sbjct: 275 IIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQR 333

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I  +I +Y+ LID +CK G ME A          ++ P+VVTY+ +I GY K G   E
Sbjct: 334 RGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEE 393

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
           A+ LY  M  +G+ PD +  +TL D
Sbjct: 394 AIGLYHDMKESGVRPDRVSYNTLID 418



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 78/142 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
            D AL     +   GL+ D++TYN +I  Y    +  +A  LF+K+    L PN +T++ 
Sbjct: 426 FDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSA 485

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LIDA+ K G   DAT +F +    G K +VV YS LID   K   ++ A  + +EM +  
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545

Query: 128 ISPNIVSYSILIDGLCKRGLME 149
           I PNIV+Y+ LID   + G ++
Sbjct: 546 IQPNIVTYNSLIDAYGRNGQVD 567



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 27/231 (11%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H DA   +F +    GL+PD++ Y+++I   C    +++AV L +++T   ++PN +T+ 
Sbjct: 496 HQDAT-SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYN 554

Query: 67  ILIDAFCKEGRMDD-----ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK------S 115
            LIDA+ + G++D+       M  +   + G ++  +    L       QN        +
Sbjct: 555 SLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLT----SQQNANDHTGVLA 610

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI--- 172
           A  V+ EM +  + PN+V++S +++   +   ++EA       L+     D   Y I   
Sbjct: 611 AVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEA----SVLLEQMRFFDSWVYGIAHG 666

Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD---YNLQSSGSQE 220
           L+ G  +     EA +L+D + R          + L D   +  Q  G+QE
Sbjct: 667 LLMGL-REHVWVEAQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQE 716



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +I+I    + G+++ A  +F++  + G   NV  YS ++  Y +S   + A  V++ M +
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262

Query: 126 NNISPNIVSYSILIDGLCKRGL-MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
               PN+++Y+ +ID   K G+ +++AL  F       + PD +T+  LI    +     
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++ +++  M R GI  D    +TL D
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLID 348


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 103/193 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A KL   +  +G  P+ +TYNT+I G C   +LD+A+ L EK+   +  PN
Sbjct: 278 LSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPN 337

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  +I+   K+ R +D   +   M E+G KAN   YS LI G FK    ++A  +++
Sbjct: 338 QVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWK 397

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E    PN+V Y   IDGLC+    +EA       L    LP+  TY+ L++G+ K G
Sbjct: 398 EMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG 457

Query: 182 RPTEAMQLYDSML 194
              +A+ ++  M+
Sbjct: 458 DSQKAILVWKEMM 470



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 4/205 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE   + A++L+ ++ ++G +P+++ Y   I G C   + DEA  + +++      PN
Sbjct: 383 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 442

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + T++ L+  F K+G    A +++ +M+ +  + NVV  S L++G  +S  ++ A  V+ 
Sbjct: 443 AFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT 502

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL---YAFHCALDNHLLPDVVTYAILIRGYC 178
            M    + P++V+YS +I GLC  G +++ L   Y   C  +    PDVVTY IL    C
Sbjct: 503 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ-EPKSRPDVVTYNILFNALC 561

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGL 203
           +    T A+ L +SML  G  PD L
Sbjct: 562 RQDNLTRAIDLLNSMLDEGCDPDSL 586



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 107/192 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K+   +  + +   + +RG + +   Y+++I G     + + AV+L++++     KPN
Sbjct: 348 LVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPN 407

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +   ID  C++ + D+A  +  +ML KG   N  TYS L+ G+FK  + + A  V++
Sbjct: 408 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 467

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM   ++  N+V  S+L++GLC+ G + EAL  +   L   L PDVV Y+ +I+G C  G
Sbjct: 468 EMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVG 527

Query: 182 RPTEAMQLYDSM 193
              + ++L+  M
Sbjct: 528 SVDKGLKLFYEM 539



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 104/201 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD AL L  ++      P+ +TY TII G     R ++ V +   +     K N   ++ 
Sbjct: 319 LDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS 378

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    KEG+ ++A  ++ +M EKG K NVV Y   IDG  + +    A D+ +EM    
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN  +YS L+ G  K+G  ++A+  +   +   +  +VV  ++L+ G C++GR  EA+
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            ++  ML  G+ PD +  S++
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSM 519



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 4/226 (1%)

Query: 1   MLIKECHLDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ 57
           ++I+E     A K +  +     +G +P+++TYN II   C L ++D AV  F ++    
Sbjct: 169 VIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 228

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
             P+  T++ L++  CKE R+D+A  +  +M  +G   N VT++ LID   K+ ++  A 
Sbjct: 229 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 288

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
            + + M      PN V+Y+ LI GLC +G +++AL      + +  +P+ VTY  +I G 
Sbjct: 289 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 348

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
            K  R  + + +  SM   G   +  + S+L    L   G  E+ +
Sbjct: 349 VKQRRAEDGVHILMSMEERGQKANEYIYSSLIS-GLFKEGKSENAV 393



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+  F ++  +   PD+ TY+T++ G C   R+DEAV L +++      PN
Sbjct: 208 LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 267

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF +LIDA  K G +  A  +   M  KG   N VTY+ LI G      +  A  + E
Sbjct: 268 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE 327

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +   PN V+Y  +I+GL K+   E+ ++      +     +   Y+ LI G  K G
Sbjct: 328 KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 387

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +   A++L+  M   G  P+ ++     D
Sbjct: 388 KSENAVRLWKEMAEKGCKPNVVVYGAFID 416



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 23/169 (13%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK--PNSIT 64
            L  AL ++  +   GL+PD++ Y+++I G C +  +D+ ++LF ++ C + K  P+ +T
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKG---------------------PKANVVTYSCL 103
           + IL +A C++  +  A  + + ML++G                     P+   +    L
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 612

Query: 104 IDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
           +    K +   SA  + EEM    + P   ++S +I   CK   + E +
Sbjct: 613 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 23/200 (11%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ ++ ++  + +  +++  + ++ G C   RL EA+ ++  +    LKP+ + ++ +I 
Sbjct: 462 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 521

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
             C  G +D    +F +M  + PK+  +VVTY+ L +   +  N+  A D+   M +   
Sbjct: 522 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGC 581

Query: 129 SPNIVSYSILI-----------DG----------LCKRGLMEEALYAFHCALDNHLLPDV 167
            P+ ++ +I +           DG          L KR     AL      L   L P+ 
Sbjct: 582 DPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEP 641

Query: 168 VTYAILIRGYCKAGRPTEAM 187
            T++ +I+  CK  R  E +
Sbjct: 642 STWSRVIQRTCKPKRIRETI 661


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 109/202 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A  +  Q+ D G  PD  T+NT+I   C+ N+L+EA+ L  +LT   L PN  TF 
Sbjct: 351 ELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFN 410

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI+A CK G    A  +F +M   G   + VTY+ LID    S  +  A D+ +EM  +
Sbjct: 411 ILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS 470

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               + V+Y+ +IDGLCKR  +EEA   F       +  + +T+  LI G C A R  +A
Sbjct: 471 GCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDA 530

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
            +L D M+  G+ P+ +  +++
Sbjct: 531 AELVDQMISEGLQPNNVTYNSI 552



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  ++AAL+L  ++++ G  P  +T N +I GYC L R+ +A+   ++      +P+
Sbjct: 241 FVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPD 300

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF+  ++  C+ G +D A  +   ML++G + +V TYS +I+    +  ++ A  +  
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVN 360

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M ++   P+  +++ LI  LC    +EEAL          L P+V T+ ILI   CK G
Sbjct: 361 QMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVG 420

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
            P  A++L++ M  +G  PD +  + L D NL SSG
Sbjct: 421 DPHLAVRLFEEMKSSGCTPDEVTYNILID-NLCSSG 455



 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L+ AL L  +LT +GL P++ T+N +I   C +     AV+LFE++      P+
Sbjct: 381 LCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD 440

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ ILID  C  G++  A  +  +M   G   + VTY+ +IDG  K + ++ A +V++
Sbjct: 441 EVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFD 500

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    I  N ++++ LIDGLC    +++A       +   L P+ VTY  ++  YCK G
Sbjct: 501 QMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQG 560

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A  +  +M  NG   D +  +TL
Sbjct: 561 NISKAADILQTMTANGFEVDVVTYATL 587



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 36/231 (15%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  AL L  ++   G     +TYNTII G C   R++EA ++F+++    +  N+ITF 
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID  C   R+DDA  +  +M+ +G + N VTY+ ++  Y K  N+  A D+ + M  N
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575

Query: 127 NISPNIVSYSILIDGLCK-----------RGLM------------------------EEA 151
               ++V+Y+ LI+GLCK           RG+                          +A
Sbjct: 576 GFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDA 635

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
           L  F    +    PD  TY I+ RG C+ G P  EA      M  NG +P+
Sbjct: 636 LSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPE 686



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 2/198 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + + HL  A++LF ++   G  PD +TYN +I   CS  +L +A+ L +++       ++
Sbjct: 419 VGDPHL--AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T+  +ID  CK  R+++A  +F +M   G   N +T++ LIDG   ++ +  A ++ ++
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN V+Y+ ++   CK+G + +A         N    DVVTYA LI G CKA R
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A++L   M   G+ P
Sbjct: 597 TQAALKLLRGMRMKGMKP 614



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 105/194 (54%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           + +++ +G+EPD++T+NT+I   C   +   AV + E+++   + P+  TFT L++ F +
Sbjct: 184 YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVE 243

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           EG ++ A  + ++M E G     VT + LI+GY K   +  A    ++   +   P+ V+
Sbjct: 244 EGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVT 303

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           +S  ++GLC+ G ++ AL      L     PDV TY+ +I   C  G   EA  + + M+
Sbjct: 304 FSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMV 363

Query: 195 RNGIMPDGLLLSTL 208
            +G +PD    +TL
Sbjct: 364 DSGCLPDTTTFNTL 377



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 101/200 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL    Q    G EPD +T++T + G C    +D A+++   +     +P+  T++ +I+
Sbjct: 285 ALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVIN 344

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  G +++A  + ++M++ G   +  T++ LI        ++ A D+  E+    +SP
Sbjct: 345 CLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSP 404

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +++ILI+ LCK G    A+  F     +   PD VTY ILI   C +G+  +A+ L 
Sbjct: 405 NVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLL 464

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M  +G     +  +T+ D
Sbjct: 465 KEMEVSGCPQSTVTYNTIID 484



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 97/192 (50%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           QL   G++ +   YN ++      +++      + +++   ++P+ +TF  +IDA C+  
Sbjct: 151 QLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRAR 210

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           +   A +M  +M       +  T++ L++G+ +  ++++A  +   M E   SP  V+ +
Sbjct: 211 QARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVN 270

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
           +LI+G CK G + +AL      + +   PD VT++  + G C+ G    A+++   ML+ 
Sbjct: 271 VLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQE 330

Query: 197 GIMPDGLLLSTL 208
           G  PD    ST+
Sbjct: 331 GCEPDVYTYSTV 342



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 3/192 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ ++  A  +   +T  G E D++TY T+I G C   R   A++L   +    +KP   
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN-MKSAFDVYEE 122
            +  +I +  +     DA  +F +M E G   +  TY  +  G  +    +K AFD   E
Sbjct: 618 AYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVE 677

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M +N   P   S+ +L +GL   G+ +  + A    ++     +    A  IRGY +  +
Sbjct: 678 MADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFRESDISA--IRGYLRIRK 735

Query: 183 PTEAMQLYDSML 194
             +A+  +  +L
Sbjct: 736 YYDAIATFGRLL 747



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 1/152 (0%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           L P+   +  +I      G  D   ++  +M  +G +  +      I  Y + Q    AF
Sbjct: 86  LTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAF 145

Query: 118 D-VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           D V  ++    +  N   Y+ L+  L +   ++    A+       + PDVVT+  +I  
Sbjct: 146 DLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDA 205

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
            C+A +   A+ + + M    + PD    +TL
Sbjct: 206 LCRARQARTAVLMLEEMSSCDVAPDETTFTTL 237


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 1/203 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCS-LNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++ A ++   +    + P +I Y TI+ GY        +A +L+ K+  +  KP+++T T
Sbjct: 486 VEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLT 545

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+D F K G+M  A  +F +M E+G   +   ++ +IDGY +  N+K A+ +Y++M  N
Sbjct: 546 VLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRN 605

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N++PN+ +Y+ L+DG CK   ++ A         N + PDV TY  LI GY +      A
Sbjct: 606 NVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRA 665

Query: 187 MQLYDSMLRNGIMPDGLLLSTLA 209
            +++D M + G +PD +   TL 
Sbjct: 666 YEVFDEMKKKGTLPDHIAYLTLG 688



 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 112/203 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D ALKL  ++ D G+ PDI +Y+ ++  +C+   ++  + L +++     KP  +  T +
Sbjct: 277 DEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSV 336

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +     +G ++D    F ++  KG K ++++YS LI G+ K  N+KSA ++  EM +N +
Sbjct: 337 LMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGL 396

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ + Y  LI   C++G ++EAL  F+  L + L PD++T   ++  YC  G+  EA+ 
Sbjct: 397 VPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALI 456

Query: 189 LYDSMLRNGIMPDGLLLSTLADY 211
             + M    I+P+    S + ++
Sbjct: 457 YINQMKDQNILPNSYTYSVIINW 479



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  ALK F  +   GL+PDIIT N I+  YCS  + +EA+    ++    + PNS T+++
Sbjct: 416 LKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSV 475

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKS-QNMKSAFDVYEEMCEN 126
           +I+  CK   ++ A  +   M +     +V+ Y+ ++DGY K  +N   A+ +Y +M + 
Sbjct: 476 IINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKL 535

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P+ V+ ++L+D   KRG M +AL  F    +  L  D   +  +I GYC+ G    A
Sbjct: 536 GCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRA 595

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
             +Y  M RN + P+    + L D
Sbjct: 596 WSMYKKMKRNNVTPNVKTYTCLVD 619



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 1/200 (0%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L  F +L+ +G + D+I+Y+T+I G+   + +  A  L  ++    L P+ I +  LI  
Sbjct: 350 LNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIRE 409

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +C++G + +A   F  ML+ G + +++T + ++D Y      + A     +M + NI PN
Sbjct: 410 YCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPN 469

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR-PTEAMQLY 190
             +YS++I+ LCK   +E+A         +++ P V+ Y  ++ GY K  + P +A +LY
Sbjct: 470 SYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLY 529

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             M + G  PD + L+ L D
Sbjct: 530 RKMPKLGCKPDNVTLTVLVD 549



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 103/201 (51%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +  ++ ++G  P ++TY   I G C +  +++A    + L       N   +  
Sbjct: 206 MEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNA 265

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI  FC++GR D+A  +  +M ++G   ++ +YS L++ +    +++S  ++ +EM   N
Sbjct: 266 LIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCN 325

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P +V  + ++ GL  +GL+ + L  FH         D+++Y+ LI G+ K      A 
Sbjct: 326 KKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSAN 385

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
            L   M +NG++PD ++  +L
Sbjct: 386 NLVHEMRKNGLVPDYIIYISL 406



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 75/138 (54%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           M  K   +  AL LF ++ + GL  D   +  II GYC +  +  A  +++K+    + P
Sbjct: 550 MFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTP 609

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+T L+D FCK  R+D ATM+   M       +V TY+ LI GY + +N+  A++V+
Sbjct: 610 NVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVF 669

Query: 121 EEMCENNISPNIVSYSIL 138
           +EM +    P+ ++Y  L
Sbjct: 670 DEMKKKGTLPDHIAYLTL 687



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 5/191 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  +F Q    G+E +I + N ++      ++L+    LF+ L      PN  T+TI
Sbjct: 131 LADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTI 190

Query: 68  LIDAFCKEGR-----MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +I+ +CKE       M+ A+++  +M EKG    VVTY   I G  +  +++ A++  ++
Sbjct: 191 MINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQD 250

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           +  +N   NI  Y+ LI G C++G  +EAL       D  + PD+ +Y+IL+  +C  G 
Sbjct: 251 LRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGD 310

Query: 183 PTEAMQLYDSM 193
               M L   M
Sbjct: 311 IESGMNLIQEM 321



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 33  IICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
           +I  + S   L +A  +F +   + ++ N  +   L+    +  +++    +F  +   G
Sbjct: 121 LIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSG 180

Query: 93  PKANVVTYSCLIDGYFKSQ-----NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           P  NV TY+ +I+ Y K +     +M+ A  + EEM E   +P +V+Y + I GLC+ G 
Sbjct: 181 PSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGS 240

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           +E+A         ++   ++  Y  LI+G+C+ GRP EA++L + M   GI PD    S 
Sbjct: 241 IEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSI 300

Query: 208 LAD 210
           L +
Sbjct: 301 LVN 303


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 112/200 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P+++T+N+++ GYC +  ++EA  L + +  + ++PN
Sbjct: 518 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 577

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              +  L+D +CK GR+DDA  +F  ML KG K   V YS ++ G F+++   +A  ++ 
Sbjct: 578 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 637

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+  + +I +Y +++ GLC+    +EA          ++  D++T+ I+I    K G
Sbjct: 638 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 697

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA +L+D++   G++P+
Sbjct: 698 RRQEAKELFDAISTYGLVPN 717



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT-FT 66
           LD AL  F  + D G+ P    Y  +I G C+   L +A +L  ++    + P  +  F+
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I+  CKEGR+ +   +   M++ G + NVVT++ L++GY    NM+ AF + + M   
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            I PN   Y  L+DG CK G +++AL  F   L   + P  V Y+I++ G  +A R T A
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632

Query: 187 MQLYDSMLRNG 197
            +++  M+ +G
Sbjct: 633 KKMFHEMIESG 643



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+ +F  + ++G+ PD +T+ T+I   C + RLD+A+  F  +  + + P+   +  
Sbjct: 418 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 477

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKG-PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           LI   C  G +  A  + S+M+ K  P   V  +S +I+   K   +    D+ + M + 
Sbjct: 478 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 537

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              PN+V+++ L++G C  G MEEA           + P+   Y  L+ GYCK GR  +A
Sbjct: 538 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 597

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
           + ++  ML  G+ P  +L S +
Sbjct: 598 LTVFRDMLHKGVKPTSVLYSII 619



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 37/236 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +  ++ D G+ PD+ TY+ II G C    +D+A ++ E++     +PN
Sbjct: 235 LCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPN 294

Query: 62  SITFTILIDAFC-----------------------------------KEGRMDDATMMFS 86
           SIT+  LI  +                                    K GR ++A  +F 
Sbjct: 295 SITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFD 354

Query: 87  KMLEKGPKANVVTYSCLIDGYFKSQN--MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            M+ KGPK ++++YS ++ GY  + +  +    +++  M    I+PN   ++ILI+   +
Sbjct: 355 SMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYAR 414

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            G+M++A+  F    +  ++PD VT+A +I   C+ GR  +A+  ++ M+  G+ P
Sbjct: 415 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 470



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F  +  +G+ P+   +N +I  Y     +D+A+ +FE +    + P+++TF  +I + C
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 448

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   Y CLI G      +  A ++  EM   +I P  V
Sbjct: 449 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            Y S +I+ LCK G + E        +     P+VVT+  L+ GYC  G   EA  L D+
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   GI P+  +  TL D
Sbjct: 569 MASIGIEPNCYIYGTLVD 586



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 37/239 (15%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+ + G  P+ ITYN++I GY      +E+V++F++++   + P 
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 329

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN--------- 112
                  I A  K GR ++A  +F  M+ KGPK ++++YS ++ GY  + +         
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 389

Query: 113 ----------------------------MKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
                                       M  A  ++E+M    + P+ V+++ +I  LC+
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
            G +++AL+ F+  +D  + P    Y  LI+G C  G   +A +L   M+   I P G+
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508



 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 2/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            +K+  +D A  LF ++ ++G+ P I+  N+II   C +  +D+A  + +K+    + P+
Sbjct: 200 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 259

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T++++ID  CK   MD A  +  +M+E G + N +TY+ LI GY  S     +  V++
Sbjct: 260 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 319

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P + + +  I  L K G   EA   F   +     PD+++Y+ ++ GY  A 
Sbjct: 320 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 379

Query: 182 RP--TEAMQLYDSMLRNGIMPDGLLLSTL 208
                +   +++ ML  GI P+  + + L
Sbjct: 380 DSCLADVHNIFNLMLTKGIAPNKHVFNIL 408



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L + G+L   GL PD  +Y ++I G+     +D+A  LF ++    + P  +    +
Sbjct: 173 DLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSI 231

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   CK   MD A  +  KM++ G   ++ TYS +IDG  KS+ M  A  V E+M E   
Sbjct: 232 IKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT 291

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            PN ++Y+ LI G    G+  E++  F       ++P V      I    K GR  EA  
Sbjct: 292 RPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKC 351

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           ++DSM+  G  PD +  ST+
Sbjct: 352 IFDSMVLKGPKPDIISYSTM 371



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 105/202 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A  L   +   G+EP+   Y T++ GYC   R+D+A+ +F  +    +KP S+ ++
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 617

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY  ++ G  ++     A  + E++   
Sbjct: 618 IILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAM 677

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P++ TY+++I    K     EA
Sbjct: 678 NVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 737

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ S+ ++G   D  LL+ +
Sbjct: 738 DNLFISVEKSGHASDSRLLNHI 759



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 5/198 (2%)

Query: 2   LIKEC----HLDAALKLFGQLTDRGLEPDIITY-NTIICGYCSLNRLDEAVQLFEKLTCV 56
           LI+ C     L  A +L  ++ ++ + P  + Y ++II   C   R+ E   + + +   
Sbjct: 478 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 537

Query: 57  QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
             +PN +TF  L++ +C  G M++A  +   M   G + N   Y  L+DGY K+  +  A
Sbjct: 538 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 597

Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
             V+ +M    + P  V YSI++ GL +      A   FH  +++     + TY +++ G
Sbjct: 598 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 657

Query: 177 YCKAGRPTEAMQLYDSML 194
            C+     EA  L + + 
Sbjct: 658 LCRNNCTDEANMLLEKLF 675



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 38/193 (19%)

Query: 46  AVQLFEKL---TCVQLKPNSI-TFTILID------------------------------- 70
           A++LF+++    C +  P +I T+ ILID                               
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 71  ---AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
               F K+G +D A  +F +M+E+G    ++  + +I    K + M  A  + ++M ++ 
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I+P++ +YS++IDGLCK   M++A       ++    P+ +TY  LI GY  +G   E++
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 188 QLYDSMLRNGIMP 200
           +++  M   G++P
Sbjct: 316 RVFKQMSSCGVIP 328



 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           TY+ LID Y +         +   + +N + P+  SYS LI G  K G +++A   F   
Sbjct: 158 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 216

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++  +LP ++    +I+  CK     +A  +   M+ +GI PD    S + D
Sbjct: 217 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A ++  ++  + + P+++TY+T+I GY    RLD+A  LF ++  + +  + +
Sbjct: 230 KGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRV 289

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L+  + K GR ++A  +  +M   G + +VVTY+ L+ GY K         V+EEM
Sbjct: 290 SYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEM 349

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              ++SPN+++YS LID   K GL  EA+  F       L  DVV Y+ LI   CK G  
Sbjct: 350 KARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLV 409

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
             A+ L D M + GI P+ +  +++ D
Sbjct: 410 ESAVSLLDEMTKEGIRPNVVTYNSIID 436



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 5/196 (2%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           + A+K+F  + D GL+P+++TYN +I  CG   +      +++F+++    ++P+ ITF 
Sbjct: 129 NEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVE-FKRVLEIFDEMLRNGMQPDRITFN 187

Query: 67  ILIDAFCKEGRMDDATMMFS-KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            L+ A C +G + +A    S +M+ +G   ++ TY+ L+D   K   +  AF++  EM  
Sbjct: 188 SLL-AVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPA 246

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
            NI PN+V+YS +IDG  K G +++A   F+      +  D V+Y  L+  Y K GR  E
Sbjct: 247 KNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEE 306

Query: 186 AMQLYDSMLRNGIMPD 201
           AM +   M  +GI  D
Sbjct: 307 AMDVCREMENSGIRKD 322



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 3/188 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A  LF ++   G+  D ++YNT++  Y  L R +EA+ +  ++    ++ + +
Sbjct: 265 KAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVV 324

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+  + K+ + D    +F +M  +    N++TYS LID Y K    + A DV+ E 
Sbjct: 325 TYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF 384

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  +  ++V YS LID LCK GL+E A+          + P+VVTY  +I  +   GRP
Sbjct: 385 KKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF---GRP 441

Query: 184 TEAMQLYD 191
                + D
Sbjct: 442 ATTESVVD 449



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 3/203 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +F      G    +  ++ II  Y      +EA+++F  +    LKPN +T+  
Sbjct: 93  VEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNA 152

Query: 68  LIDAFCKEGRMDDATMM--FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           +IDA C +G ++   ++  F +ML  G + + +T++ L+    K    ++A  +  EM  
Sbjct: 153 VIDA-CGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVN 211

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I  +I +Y+ L+D +CK G ++ A          ++LP+VVTY+ +I GY KAGR  +
Sbjct: 212 RGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDD 271

Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
           A  L++ M   GI  D +  +TL
Sbjct: 272 ARNLFNEMKFLGISLDRVSYNTL 294



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 1/146 (0%)

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
           + +I    + G+++ A  +F   L +G    V  +S +I  Y +S     A  ++  M +
Sbjct: 81  SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140

Query: 126 NNISPNIVSYSILIDGLCKRGL-MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
             + PN+V+Y+ +ID   K G+  +  L  F   L N + PD +T+  L+    K G   
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200

Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
            A  L   M+  GI  D    +TL D
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLD 226



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 27/168 (16%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F +    GL+ D++ Y+ +I   C    ++ AV L +++T   ++PN +T+  +ID
Sbjct: 377 AMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIID 436

Query: 71  AFCK----EGRMDDATM--------MFSKMLEKGPKANVV------------TYSCLIDG 106
           AF +    E  +DDA          + S  +EK  K+ V               +    G
Sbjct: 437 AFGRPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAG 496

Query: 107 YFKS---QNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
             K+   Q M     V+ +M E  I PN+V++S +++   +    EEA
Sbjct: 497 QAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEA 544


>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIIC--GYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +E +L+ A+K++  +     +PD+ TYN +I   G C ++R  EA +LF+ L      P+
Sbjct: 306 RESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSR--EAGRLFKDLESKGFLPD 363

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+ AF +EG +D    +   M++ G   + +TY+ +I  Y K      AF +Y 
Sbjct: 364 AVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYS 423

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +  SP+ V+Y++LID L K  +++EA       L+  + P + T++ LI GY KAG
Sbjct: 424 DMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAG 483

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA + +D MLR+GI PD L  S + D
Sbjct: 484 KRVEAEETFDCMLRSGIKPDHLAYSVMLD 512



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  L  +G  PD +TYN+++  +     +D+  ++ E +  +    + +T+  +I 
Sbjct: 348 AGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIH 407

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G+ D A  ++S M   G   + VTY+ LID   K+  +K A +V  EM    + P
Sbjct: 408 MYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKP 467

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + ++S LI G  K G   EA   F C L + + PD + Y++++    +     +AM+LY
Sbjct: 468 TLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLY 527

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+ +   PD  L   +
Sbjct: 528 QEMVLHSFKPDHALYEVM 545



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 95/190 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++D   ++   +   G   D +TYNTII  Y    + D A QL+  +      P+++
Sbjct: 376 REGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAV 435

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+LID+  K   + +A  + S+ML    K  + T+S LI GY K+     A + ++ M
Sbjct: 436 TYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCM 495

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I P+ ++YS+++D L +     +A+  +   + +   PD   Y +++R   K  R 
Sbjct: 496 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 555

Query: 184 TEAMQLYDSM 193
            +  ++   M
Sbjct: 556 EDVHKVVKDM 565



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 8/193 (4%)

Query: 13   KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
            +++  + + GL+PD  TYNT+I  YC   R +E + L  ++  V L+P   T+  LI AF
Sbjct: 943  QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF 1002

Query: 73   CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
             K   ++ A  +F  +L K  K +   Y  ++  +  S N   A  +   M E  + P I
Sbjct: 1003 GKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTI 1062

Query: 133  VSYSILIDGLCKRGLMEEALYAFHCALDN---HLLP-DVVTYAILIRGYCKAGRPTEAMQ 188
             +  +L+      G  EEA       LDN     LP   + Y+ +I  Y K G    A+Q
Sbjct: 1063 ATMHLLMVSYSGSGQPEEA----EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 1118

Query: 189  LYDSMLRNGIMPD 201
                M ++G+ PD
Sbjct: 1119 KLMEMKKDGLEPD 1131



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM--DDATMM 84
           +  YN ++  Y    R  +  +L + +     +P+ ++F  LI+A  K G M  + A  +
Sbjct: 222 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 281

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            +++   G + +++TY+ LI    +  N++ A  VY +M  +   P++ +Y+ +I    +
Sbjct: 282 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGR 341

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G+  EA   F        LPD VTY  L+  + + G   +  ++ + M++ G   D + 
Sbjct: 342 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMT 401

Query: 205 LSTL 208
            +T+
Sbjct: 402 YNTI 405



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 91/193 (47%)

Query: 23   LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
             +PD+  +N+++  Y  +    +  Q+++ +    LKP+  T+  LI  +C++ R ++  
Sbjct: 918  FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 977

Query: 83   MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
             +  +M   G +  + TY  LI  + K Q ++ A +++E +       +   Y I++   
Sbjct: 978  SLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMF 1037

Query: 143  CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
               G   +A        +  + P + T  +L+  Y  +G+P EA ++ D++   G+    
Sbjct: 1038 RNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLST 1097

Query: 203  LLLSTLADYNLQS 215
            L  S++ D  L++
Sbjct: 1098 LPYSSVIDAYLKN 1110



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 80/190 (42%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            +  L L  ++   GLEP + TY ++I  +  L  +++A +LFE L   + K +   + I+
Sbjct: 974  EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1033

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +  F   G    A  +   M E G +  + T   L+  Y  S   + A  V + +    +
Sbjct: 1034 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1093

Query: 129  SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
              + + YS +ID   K G    A+        + L PD   +   +R    +   +EA+ 
Sbjct: 1094 PLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIV 1153

Query: 189  LYDSMLRNGI 198
            L  ++   G 
Sbjct: 1154 LLKALRDTGF 1163



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 81/192 (42%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           + A  +F  +   G  P + + N ++       RLDE   + ++L  +  K +  + T++
Sbjct: 799 ERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLM 858

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +DAF   G + +   ++  M   G    +  Y  +I    K + ++    +  EM     
Sbjct: 859 LDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARF 918

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++  ++ ++      G  ++    +    +  L PD  TY  LI  YC+  RP E + 
Sbjct: 919 KPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLS 978

Query: 189 LYDSMLRNGIMP 200
           L   M R G+ P
Sbjct: 979 LMHEMRRVGLEP 990



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 15/193 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +IKE     A ++  ++ +  ++P + T++ +ICGY    +  EA + F+ +    +KP+
Sbjct: 449 MIKE-----AAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPD 503

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY- 120
            + +++++D   +      A  ++ +M+    K +   Y  ++    K    +    V  
Sbjct: 504 HLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVK 563

Query: 121 --EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
             EE+C  N   + V  SIL+ G C     + A      A+      D      ++  Y 
Sbjct: 564 DMEELCGMN---SQVICSILVKGEC----FDHAANMLRLAISQGCELDRENLLSILGSYG 616

Query: 179 KAGRPTEAMQLYD 191
            +GR  EA +L D
Sbjct: 617 SSGRHLEARELLD 629



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 37/237 (15%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL-DEAVQLFEKLTCVQLK 59
           ML K   L  AL+ +G+  D GL     T    +   C  N L  EA Q+F  +    ++
Sbjct: 649 MLCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVE 708

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKG----------------------PKANV 97
           P+   +  ++  +CK G  + A  +  +  EKG                       KA  
Sbjct: 709 PSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAES 768

Query: 98  V--------------TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +               ++ LI  Y  S   + A  ++  M  +  SP + S + L+  L 
Sbjct: 769 LVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALI 828

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             G ++E         D        +  +++  +  AG   E  ++Y  M   G  P
Sbjct: 829 VDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFP 885


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 1/211 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+KL  ++  +G +PD++TYN +I G C   RLDEA++    +     +PN IT  I++ 
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILR 322

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           + C  GR  DA  + + ML KG   +VVT++ LI+   + + +  A DV E+M ++   P
Sbjct: 323 SMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N +SY+ L+ G C+   M+ A+      +     PD+VTY  L+   CK G+   A+++ 
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           + +   G  P  +  +T+ D  L   G  E+
Sbjct: 443 NQLSSKGCSPVLITYNTVID-GLTKVGKTEY 472



 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 4/207 (1%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A+ +  ++   G  P+ ++YN ++ G+C   ++D A++  E +      P+ +T+  
Sbjct: 365 LGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 424

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ A CK+G+ D A  + +++  KG    ++TY+ +IDG  K    + A ++ EEM    
Sbjct: 425 LLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKG 484

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+I++YS L+ GL   G ++EA+  FH      + P  VTY  ++ G CKA + + A+
Sbjct: 485 LKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 544

Query: 188 QLYDSMLRNGIMPDG----LLLSTLAD 210
                M+  G  P      +L+  +AD
Sbjct: 545 DFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 104/205 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  LD A+K    +   G +P++IT+N I+   CS  R  +A +L   +      P+ +
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF ILI+  C++  +  A  +  KM + G   N ++Y+ L+ G+ + + M  A +  E M
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P+IV+Y+ L+  LCK G  + A+   +        P ++TY  +I G  K G+ 
Sbjct: 411 VSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A +L + M R G+ PD +  STL
Sbjct: 471 EYAAELLEEMRRKGLKPDIITYSTL 495



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 3/200 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   +D AL++  +++   + PD++TYNTI+   C   +L EA+++ ++    +  P+ I
Sbjct: 189 KSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI 245

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+TILI+A C +  +  A  +  +M +KG K +VVTY+ LI+G  K   +  A      M
Sbjct: 246 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 305

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN+++++I++  +C  G   +A       L     P VVT+ ILI   C+    
Sbjct: 306 PLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLL 365

Query: 184 TEAMQLYDSMLRNGIMPDGL 203
             A+ + + M ++G MP+ L
Sbjct: 366 GRAIDVLEKMPKHGCMPNSL 385



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 3/200 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++   L+  LK   ++  +G  PD+I   ++I G+C   +  +A ++ E L      P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ +LI  +CK G +D A  +  +M       +VVTY+ ++     S  +K A +V +
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
              +    P++++Y+ILI+  C    + +A+            PDVVTY +LI G CK G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA++  ++M   G  P+
Sbjct: 294 RLDEAIKFLNNMPLYGCQPN 313



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 88/173 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +D A++    +  RG  PDI+TYNT++   C   + D AV++  +L+     P  I
Sbjct: 396 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLI 455

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID   K G+ + A  +  +M  KG K +++TYS L+ G      +  A  ++ +M
Sbjct: 456 TYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
              +I P+ V+Y+ ++ GLCK      A+      ++    P   TY ILI G
Sbjct: 516 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 79/141 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+   DAA+++  QL+ +G  P +ITYNT+I G   + + + A +L E++    LKP+
Sbjct: 429 LCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ L+     EG++D+A  +F  M     K + VTY+ ++ G  K+Q    A D   
Sbjct: 489 IITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLA 548

Query: 122 EMCENNISPNIVSYSILIDGL 142
            M E    P   +Y+ILI+G+
Sbjct: 549 YMVEKGCKPTKATYTILIEGI 569



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 3/151 (1%)

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I +    + G +++      +M+ +G   +V+  + LI G+ +S   + A  + E +  +
Sbjct: 112 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENS 171

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++++Y++LI G CK G +++AL          + PDVVTY  ++R  C +G+  EA
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRSLCDSGKLKEA 228

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           M++ D  ++    PD +  + L +     SG
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSG 259


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 1/208 (0%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           +++GQL   GL  ++ +YN II  +C    +D A + F  +    + PN +TF  LI+  
Sbjct: 415 RVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGH 474

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           CK+G +D A  +   +LE G K ++ T+S ++DG  + +  + A + + EM E  I+PN 
Sbjct: 475 CKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNA 534

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
           V Y+ILI  LC  G +  ++          + PD  +Y  LI+ +C+  +  +A +L+DS
Sbjct: 535 VIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDS 594

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           M R+G+ PD    S   +  L  SG  E
Sbjct: 595 MSRSGLNPDNYTYSAFIEA-LSESGRLE 621



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 104/195 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A + F  +  RG+ P+++T+NT+I G+C    +D+A +L E L    LKP+  TF+ 
Sbjct: 445 MDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSS 504

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           ++D  C+  R ++A   F++M+E G   N V Y+ LI       ++  +  +   M +  
Sbjct: 505 IVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEG 564

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           ISP+  SY+ LI   C+   +E+A   F     + L PD  TY+  I    ++GR  EA 
Sbjct: 565 ISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAK 624

Query: 188 QLYDSMLRNGIMPDG 202
           +++ SM  NG  PD 
Sbjct: 625 KMFYSMEANGCSPDS 639



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   L     +F  L  +G++  I  Y  +I         +E  +++ +L    L  N
Sbjct: 369 LVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISN 428

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ ++I+ FC+   MD+A+  F  M  +G   N+VT++ LI+G+ K   +  A  + E
Sbjct: 429 VFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLE 488

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + EN + P+I ++S ++DGLC+    EEAL  F   ++  + P+ V Y ILIR  C  G
Sbjct: 489 SLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIG 548

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               +++L   M + GI PD
Sbjct: 549 DVARSVKLLRRMQKEGISPD 568



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 102/195 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +D A KL   L + GL+PDI T+++I+ G C + R +EA++ F ++    + PN++
Sbjct: 476 KDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAV 535

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            + ILI + C  G +  +  +  +M ++G   +  +Y+ LI  + +   ++ A  +++ M
Sbjct: 536 IYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM 595

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + ++P+  +YS  I+ L + G +EEA   F+    N   PD     ++I+   +    
Sbjct: 596 SRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYV 655

Query: 184 TEAMQLYDSMLRNGI 198
            EA  + +   + GI
Sbjct: 656 EEAQNIIERCRQKGI 670



 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 97/187 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G  P    +N ++        L E   +FE L    +K     +  LI+   K    ++ 
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
             ++ +++  G  +NV +Y+ +I+ + +++ M +A + + +M    + PN+V+++ LI+G
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +++A       L+N L PD+ T++ ++ G C+  R  EA++ +  M+  GI P+
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533

Query: 202 GLLLSTL 208
            ++ + L
Sbjct: 534 AVIYNIL 540



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITY----NTIICGYCSLNR---LDEAVQLFEKLTCVQLKPNSI 63
           AL+L  +  DR  E + + +    +T++  YC  N     +  V L   L      P + 
Sbjct: 303 ALELLSEFLDREQEQERVHFMLACDTVL--YCLANNSMAKEMVVFLRRVLGRGGYFPGNS 360

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            F +++    K   + +   +F  + ++G KA +  Y  LI+  +K++  +    VY ++
Sbjct: 361 VFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQL 420

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + +  N+ SY+++I+  C+  LM+ A  AF       ++P++VT+  LI G+CK G  
Sbjct: 421 ISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAI 480

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +A +L +S+L NG+ PD    S++ D
Sbjct: 481 DKARKLLESLLENGLKPDIFTFSSIVD 507



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%)

Query: 46  AVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
           +V L  +L  +  +        L+ ++ + G  + +  +F ++   G       Y+ LID
Sbjct: 128 SVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALID 187

Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLP 165
              KS ++  A+  +++M  +N   +  +Y+ LI G+CK G+++EAL       D    P
Sbjct: 188 ALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFP 247

Query: 166 DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           +V TY +LI G+C A R  EA  ++++M  +G+ P+
Sbjct: 248 NVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPN 283



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           +F Q++  GL P    YN +I      N +D A   F+++       +  T+  LI   C
Sbjct: 166 VFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVC 225

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           K G +D+A  +  +M +KG   NV TY+ LI+G+  +  +  AF V+E M ++ + PN  
Sbjct: 226 KVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEA 285

Query: 134 SYSILIDGLCK 144
           +   L+ G+ +
Sbjct: 286 TVRALVHGVFR 296



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%)

Query: 32  TIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
            ++  +  L   + +  +F +++ + L P +  +  LIDA  K   +D A + F +M   
Sbjct: 149 ALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAAD 208

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
              A+  TY+ LI G  K   +  A  +  +M +    PN+ +Y++LI+G C    ++EA
Sbjct: 209 NCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEA 268

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
              F    D+ + P+  T   L+ G  +   P++A++L    L
Sbjct: 269 FGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFL 311



 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 61/122 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +D A   F Q+       D  TYNT+I G C +  +DEA++L  ++      PN
Sbjct: 189 LVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPN 248

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+T+LI+ FC   R+D+A  +F  M + G   N  T   L+ G F+  +   A ++  
Sbjct: 249 VFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLS 308

Query: 122 EM 123
           E 
Sbjct: 309 EF 310



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 68/123 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           ++KL  ++   G+ PD  +YN +I  +C +N++++A +LF+ ++   L P++ T++  I+
Sbjct: 553 SVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIE 612

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + GR+++A  MF  M   G   +    + +I    + + ++ A ++ E   +  IS 
Sbjct: 613 ALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISL 672

Query: 131 NIV 133
           N +
Sbjct: 673 NSI 675



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 44/91 (48%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A KLF  ++  GL PD  TY+  I       RL+EA ++F  +      P+S    +
Sbjct: 585 VEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNL 644

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVV 98
           +I    ++  +++A  +  +  +KG   N +
Sbjct: 645 IIKILVQQEYVEEAQNIIERCRQKGISLNSI 675


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 105/191 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  L G++ ++G+ P+++TYN +I G C   R D+  +L EK+   +  P+  T+T ++ 
Sbjct: 215 AEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVH 274

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             CK G++     +  + + KG    V+TY+ LI+GY K  +MK+A DV + M  N ++P
Sbjct: 275 GLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNP 334

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + +++ +I G C  G + +A+          L P+ VT+  LI G C  G    A++L 
Sbjct: 335 GVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLL 394

Query: 191 DSMLRNGIMPD 201
           D M   G++PD
Sbjct: 395 DLMEEYGVLPD 405



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 107/191 (56%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+    Q+   GL P+ +T+N++I G CS+     A++L + +    + P+  T+ I ID
Sbjct: 355 AMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C EG++++A  +FS +  KG KA+ V Y+ L+ GY +  ++ SAF + E+M   N  P
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++ +Y+ LIDGLCK   ++ A+          + P   T+ ILI+      +  +A ++Y
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534

Query: 191 DSMLRNGIMPD 201
           + M+ +G  PD
Sbjct: 535 EQMISSGCKPD 545



 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 1/194 (0%)

Query: 8   LDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           L AA  LF Q+  R G   D  +Y  +I G C+  R+D+A ++F K++    +P   T+T
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +L+D  CK  R+ +A  +  +M+ KG   NVVTY+ LI G  +         + E+M   
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             SP+  +Y+ ++ GLCK G +       H A+   +  +V+TY  LI GYCK G    A
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA 320

Query: 187 MQLYDSMLRNGIMP 200
           + +   M RN + P
Sbjct: 321 LDVLQLMKRNRVNP 334



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +    K+  +   +G+  +++TYN +I GYC    +  A+ + + +   ++ P 
Sbjct: 276 LCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPG 335

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF  +I  FC  G++  A    ++M   G   N VT++ LI G       K A  + +
Sbjct: 336 VQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLD 395

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M E  + P+  +Y+I ID LC  G +EEA   F C     +    V Y  L+ GYC+ G
Sbjct: 396 LMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVG 455

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
               A  L + M     MPD    +TL D
Sbjct: 456 DIDSAFGLMEKMASENCMPDVHTYNTLID 484



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 8/215 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L+ A  LF  L  +G++   + Y +++ GYC +  +D A  L EK+      P+
Sbjct: 416 LCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPD 475

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  LID  CK  R+D A  +  KM ++G +    T++ LI      +    A  +YE
Sbjct: 476 VHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYE 535

Query: 122 EMCENNISPNIVSYSILI-----DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           +M  +   P+  +Y++ I     +G  K   ++ A+   H   +  + PDV TY  +I+ 
Sbjct: 536 QMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMH---EAGVFPDVETYNAIIKA 592

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           Y  AG   +A   +  ML   I PD    S L +Y
Sbjct: 593 YVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNY 627



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 1/191 (0%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L  FG +   G  P+  TYNT+I  +C L  L +A     ++    L P++ T+  L+  
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 72  FCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            C+ G +  A  +F +M  + G   +  +Y+ LI G   +  +  A  V+ +M      P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + +Y++L+DGLCK   + EA       ++  ++P+VVTY  LI G C+ GR  +  +L 
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 191 DSMLRNGIMPD 201
           + M      PD
Sbjct: 255 EKMEIQRHSPD 265



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 51/245 (20%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D+A  L  ++      PD+ TYNT+I G C + RLD A+ L +K+    ++P + TF I
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKAN------------------------------- 96
           LI     + +  DA  M+ +M+  G K +                               
Sbjct: 517 LIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE 576

Query: 97  ------VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR----G 146
                 V TY+ +I  Y  +   + AF  + +M    I P+  +YSIL++ +C +     
Sbjct: 577 AGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDA 636

Query: 147 LMEEALYA----------FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
              E ++           F    ++   P + TY  L+RG C   R  E   L   M  N
Sbjct: 637 FDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGN 696

Query: 197 GIMPD 201
            I+ D
Sbjct: 697 SILLD 701



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 55/264 (20%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   LD A+ L  ++  +G+EP   T+N +I       +  +A +++E++     KP+
Sbjct: 486 LCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPD 545

Query: 62  SITFTILI--DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF-- 117
             T+T+ I  D F    + ++  M   +M E G   +V TY+ +I  Y  +   + AF  
Sbjct: 546 KQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFA 605

Query: 118 -----------------------------------------------DVYEEMCENNISP 130
                                                          +++E+MCE++ +P
Sbjct: 606 HVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAP 665

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            I +Y  L+ GLC +  +EE  +       N +L D      L+  YC      EA + +
Sbjct: 666 GISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQF 725

Query: 191 DSMLRNGIMPD----GLLLSTLAD 210
            SM      P      LLLS L D
Sbjct: 726 RSMAHQSFQPGLKSCCLLLSGLCD 749


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 103/199 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A  +  ++   G  PD+ITYN  +   C     +EA  L E +    L P+ +T+T +I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + F K G +  A  +F++ML KG   +VVTY+ LI  +   Q +  AF  + +M E ++ 
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N+++Y+ +I+GLC    M+EA   F    +  +LP+  +Y ILI   C  G   EA++L
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           Y  ML   I PD    S  
Sbjct: 658 YREMLDRKIQPDSFTHSVF 676



 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 110/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A  LF +L  R L P +ITYNT+I G C    LD A++L +++T   L P+  T+TI
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++   K G +  A   F++ML KG K +   Y+  I G  K  +   AF + EEM    
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y++ +  LC++G  EEA       + + L+PD VTY  +I G+ K G   +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++++ ML  G+ P  +  + L
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVL 571



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 111/195 (56%), Gaps = 1/195 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++ + + A  L   +   GL PD +TY +II G+     L +A ++F ++    + P+
Sbjct: 505 LCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPS 564

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LI A   +  +D A M FSKMLEK   ANV+TY+ +I+G   ++ M  A+  ++
Sbjct: 565 VVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFD 624

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I PN  SY+ILI+  C  G  EEAL  +   LD  + PD  T+++ ++   +  
Sbjct: 625 EMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDY 684

Query: 182 RPTEAMQLYDSMLRN 196
           +   A+Q  +S+++N
Sbjct: 685 Q-VHAVQCVESLIQN 698



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 112/208 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L  E  L  A  ++G +   G++P ++TYNT++  YC   R+D+A++L  ++      P
Sbjct: 189 VLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYP 248

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+ +L++   K+G ++ A  +  +ML  G   +  TY+ LI+G+ +      AFD+ 
Sbjct: 249 NDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLV 308

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM      P + +Y+ L+ GLCK   +      F   L +   PD+V++  L+ GYC+ 
Sbjct: 309 EEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRT 368

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G  +EA  L+D +    ++P  +  +TL
Sbjct: 369 GCISEAFLLFDELKCRDLVPTVITYNTL 396



 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 108/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A   F ++  +GL+PD   YNT I G   +     A  + E++      P+ IT+ 
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYN 499

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + + A C++G  ++A  +   M+  G   + VTY+ +I+G+ K+ +++ A +V+ EM   
Sbjct: 500 VFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSK 559

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P++V+Y++LI     + +++ A   F   L+  +  +V+TY  +I G C   R  EA
Sbjct: 560 GVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEA 619

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            + +D M   GI+P+    + L +
Sbjct: 620 YKYFDEMEEKGILPNKFSYTILIN 643



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  L  ++ + GL     TYN +I G+C      EA  L E++   +  P 
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPT 319

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+   CK  ++    + FS ML+     ++V+++ L+ GY ++  +  AF +++
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+   ++ P +++Y+ LI GLC  G ++ AL       D  L PD+ TY IL+ G  K G
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLST 207
             + A   ++ ML  G+ PD    +T
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYNT 465



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 105/197 (53%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L +F ++   GL PD+   N I+      N L +A  ++  +    +KP  +T+  ++D+
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +CKEGR+D A  + S+M E+G   N VTY+ L++G  K   ++ A  + EEM  + ++ +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +Y+ LI+G C++GL  EA       ++    P + TY  L+ G CK  + T     + 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 192 SMLRNGIMPDGLLLSTL 208
            ML++   PD +  ++L
Sbjct: 345 DMLKSKFTPDIVSFNSL 361



 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+++M  N + P++ + + ++  L    L+ +A   +       + P VVTY  ++  YC
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           K GR  +A++L   M   G  P+ +  + L +  L   G  E 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVN-GLSKKGELEQ 268


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A+ L+ ++ + GL P+++TY T+I G CS   L+ A +L   +    L PN  
Sbjct: 261 KSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEW 320

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T  +LIDA CK GR+++A      +++KG K N V Y+ +ID   KS     A ++ +++
Sbjct: 321 TCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI 380

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEAL---------------YAFHCALDNHLL---- 164
                 P+   YS LIDGLC+   + EA+                 F   +D HL     
Sbjct: 381 ITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRS 440

Query: 165 ----------------PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                           PDVVTY + IR YC+ GR  +A  +   M+ +G+ P+    +TL
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500



 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ L      +G  P++  YN +I GYCS   L+ A+ +F+ +      PN  T+T LI 
Sbjct: 198 AVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLIC 257

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G+++ A +++S+M+E G   NVVTY+ LI G     +++ AF +   M    ++P
Sbjct: 258 GFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAP 317

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N  +  +LID LCK G +EEA       +   +  + V Y  +I   CK+G+   A  L 
Sbjct: 318 NEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLM 377

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
             ++  G +PD  + S+L D
Sbjct: 378 QKIITEGFVPDAHMYSSLID 397



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 99/200 (49%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +F  +   G  PD   Y+ ++ G C   R  EAV L          PN   +  LID
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            +C  G ++ A  +F  M  KG   NV TY+ LI G+ KS  ++ A  +Y  M E  ++P
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+V+Y+ LI G C  G +E A    H      L P+  T  +LI   CK GR  EA Q  
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
            S+++ GI  + ++ +++ D
Sbjct: 343 GSLVQKGIKVNQVIYTSMID 362



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 98/191 (51%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  +  RG      TY  ++ G C    + EA+ +F  +      P+S  ++I++ 
Sbjct: 128 ACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVH 187

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
             C  GR  +A  + +  + KG   NV  Y+ LIDGY  + +++ A D+++ M      P
Sbjct: 188 GLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLP 247

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+ +Y+ LI G CK G +E A+  +   ++  L P+VVTY  LI+G C  G    A +L 
Sbjct: 248 NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307

Query: 191 DSMLRNGIMPD 201
            SM   G+ P+
Sbjct: 308 HSMEACGLAPN 318



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A +  G L  +G++ + + Y ++I   C   + D A  L +K+      P+
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           +  ++ LID  C+E ++ +A  + + M+E G +AN V ++ LID + +     S   + +
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P++V+Y++ I   C+ G ME+A       +D+ + P++ TY  LI+GY   G
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
             ++A     +M+ NG  P+
Sbjct: 509 LVSQAFSSLKNMIDNGCKPN 528



 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 89/173 (51%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    D A  L  ++   G  PD   Y+++I G C  N+L EA+ L   +    ++ N
Sbjct: 364 LCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQAN 423

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ FTILID   +E R D   M+  +M   G K +VVTY+  I  Y +   M+ A  +  
Sbjct: 424 AVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMI 483

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
           +M ++ + PN+ +Y+ LI G    GL+ +A  +    +DN   P+  +Y +L+
Sbjct: 484 QMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 6/197 (3%)

Query: 11  ALKLFGQLTD------RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           AL   G L+D      R    ++ TY T+I  YC    L  A +    L    L P+S  
Sbjct: 52  ALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHA 111

Query: 65  FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
           +T  +  +C+ G    A  +F  M ++G      TY+ L+ G   +  ++ A  V+  M 
Sbjct: 112 YTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMW 171

Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
            +  +P+   YSI++ GLC  G   EA+     A+    +P+V  Y  LI GYC  G   
Sbjct: 172 PDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLE 231

Query: 185 EAMQLYDSMLRNGIMPD 201
            A+ ++  M   G +P+
Sbjct: 232 LAIDIFKGMQSKGCLPN 248



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 79/144 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E  L  A+ L   + + G++ + + +  +I  +    R D    + +++    +KP+
Sbjct: 399 LCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+ I ++C++GRM+DA  M  +M++ G + N+ TY+ LI GY     +  AF   +
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLK 518

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
            M +N   PN  SY++L+  L K+
Sbjct: 519 NMIDNGCKPNDESYTVLLGLLLKK 542



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 4/186 (2%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I   NT++        L +   L  ++    L     T+T LI+A+C  G +  A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            S +L  G   +   Y+  + GY ++     A  ++  M +   +    +Y+ L+ GLC 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G++ EA+  F     +   PD   Y+I++ G C AGR  EA+ L    +  G +P+  +
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 205 LSTLAD 210
            + L D
Sbjct: 217 YNALID 222



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 51/268 (19%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  ++ A  +  Q+ D G+ P++ TYNT+I GY +L  + +A    + +     KPN  
Sbjct: 471 QDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530

Query: 64  TFTILIDAFCKEG----------------------------------------------- 76
           ++T+L+    K+                                                
Sbjct: 531 SYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCL 590

Query: 77  ----RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
               R+++A      M       +   Y+C+I+  ++ + +K A    + M + N  P +
Sbjct: 591 SKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRL 650

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            SY  +I  LC+ G    A   F   L      D + + ILI G  + G   +  +L   
Sbjct: 651 ESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSF 710

Query: 193 MLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           M      P   + S L      +S +QE
Sbjct: 711 MEEQNCRPGSAIYSRLTGEITVTSEAQE 738


>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIIC--GYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +E +L+ A+K++  +     +PD+ TYN +I   G C ++R  EA +LF+ L      P+
Sbjct: 281 RESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSR--EAGRLFKDLESKGFLPD 338

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+ AF +EG +D    +   M++ G   + +TY+ +I  Y K      AF +Y 
Sbjct: 339 AVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYS 398

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +  SP+ V+Y++LID L K  +++EA       L+  + P + T++ LI GY KAG
Sbjct: 399 DMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAG 458

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA + +D MLR+GI PD L  S + D
Sbjct: 459 KRVEAEETFDCMLRSGIKPDHLAYSVMLD 487



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  L  +G  PD +TYN+++  +     +D+  ++ E +  +    + +T+  +I 
Sbjct: 323 AGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIH 382

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G+ D A  ++S M   G   + VTY+ LID   K+  +K A +V  EM    + P
Sbjct: 383 MYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKP 442

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + ++S LI G  K G   EA   F C L + + PD + Y++++    +     +AM+LY
Sbjct: 443 TLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLY 502

Query: 191 DSMLRNGIMPDGLL 204
             M+ +   PD  L
Sbjct: 503 QEMVLHSFKPDHAL 516



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 95/190 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++D   ++   +   G   D +TYNTII  Y    + D A QL+  +      P+++
Sbjct: 351 REGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAV 410

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+LID+  K   + +A  + S+ML    K  + T+S LI GY K+     A + ++ M
Sbjct: 411 TYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCM 470

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I P+ ++YS+++D L +     +A+  +   + +   PD   Y +++R   K  R 
Sbjct: 471 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 530

Query: 184 TEAMQLYDSM 193
            +  ++   M
Sbjct: 531 EDVHKVVKDM 540



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM--DDATMM 84
           +  YN ++  Y    R  +  +L + +     +P+ ++F  LI+A  K G M  + A  +
Sbjct: 197 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 256

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            +++   G + +++TY+ LI    +  N++ A  VY +M  +   P++ +Y+ +I    +
Sbjct: 257 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGR 316

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G+  EA   F        LPD VTY  L+  + + G   +  ++ + M++ G   D + 
Sbjct: 317 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMT 376

Query: 205 LSTL 208
            +T+
Sbjct: 377 YNTI 380



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 18/134 (13%)

Query: 1   MLIKECHLD------------------AALKLFGQLTDRGLEPDIITYNTIICGYCSLNR 42
           +L KEC LD                   A KL G + + G+EP I T + ++  Y    +
Sbjct: 600 LLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQ 659

Query: 43  LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
            +EA ++ + L    L  +++ ++ +IDA+ K G  + A     +M + G + +   ++C
Sbjct: 660 PEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 719

Query: 103 LIDGYFKSQNMKSA 116
            +     SQ+   A
Sbjct: 720 FVRAASLSQHTSEA 733



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 11/145 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +IKE     A ++  ++ +  ++P + T++ +ICGY    +  EA + F+ +    +KP+
Sbjct: 424 MIKE-----AAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPD 478

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY- 120
            + +++++D   +      A  ++ +M+    K +   Y  ++    K    +    V  
Sbjct: 479 HLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVK 538

Query: 121 --EEMCENNISPNIVSYSILIDGLC 143
             EE+C  N   + V  SIL+ G C
Sbjct: 539 DMEELCGMN---SQVICSILVKGEC 560



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)

Query: 48  QLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGY 107
           +LFE L   + K +   + I++  F   G    A  +   M E G +  + T   L+  Y
Sbjct: 595 ELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSY 654

Query: 108 FKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDV 167
             S   + A  V + +    +  + + YS +ID   K G    A+        + L PD 
Sbjct: 655 SGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDH 714

Query: 168 VTYAILIRGYCKAGRPTEAMQLYDSMLRNGI-MPDGLL 204
             +   +R    +   +EA+ L  ++   G  +P  LL
Sbjct: 715 RIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLL 752


>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
 gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
          Length = 382

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 120/249 (48%), Gaps = 42/249 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---- 57
           L KE  LD AL +  ++ D G EP+++TYN++I G C  N  D A +LFE +  V+    
Sbjct: 58  LWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPL 117

Query: 58  --------------------------------LKPNSITFTILIDAFCKEGRMDDATMMF 85
                                             P+ IT TIL+D  CKE ++  A  + 
Sbjct: 118 VTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVL 177

Query: 86  SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
            +ML+ G   N+VT   L+ G  +++ +  A  +  +M     +PN+V+Y  LIDGLCK 
Sbjct: 178 CEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 237

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +++A   +     +    DVVTY+ LI G CK GR  EA  L   M+R G  P     
Sbjct: 238 GRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGT-PS---- 292

Query: 206 STLADYNLQ 214
           STL  YNLQ
Sbjct: 293 STLT-YNLQ 300



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 7/203 (3%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L+ F  +   G+  D + Y  ++ G     RLD+A+ +  ++     +PN +T+  LID 
Sbjct: 33  LRCFRTMQGAGIVADTVIYTVLLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 92

Query: 72  FCKEGRMDDATMMFSKM--LEKGPKANVVTYSCLIDGYFKSQNMKSAFDV--YEEMCENN 127
            CK    D A  +F  M  +E  P   +VTY+ L+DG F +  ++SA  V   E M    
Sbjct: 93  LCKNNEPDRAQELFEHMKSVECSP---LVTYNTLLDGLFWTGKLESAMAVELLESMKARG 149

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            SP++++ +IL+DGLCK   +  A       LD   +P++VT   L+ G C+A R ++A+
Sbjct: 150 CSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDAL 209

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            L   M   G  P+ +   TL D
Sbjct: 210 ALMRDMTCRGCTPNVVTYGTLID 232



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 15/195 (7%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F ++    + P++   + +I G C   R  + ++ F  +    +  +++ +T+L+    K
Sbjct: 1   FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
           E R+D A  +  +M + G + NVVTY+ LIDG  K+     A +++E M     SP +V+
Sbjct: 61  EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVT 119

Query: 135 YSILIDGLCKRGLME--------EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           Y+ L+DGL   G +E        E++ A  C+      PDV+T  IL+ G CK  +   A
Sbjct: 120 YNTLLDGLFWTGKLESAMAVELLESMKARGCS------PDVITSTILVDGLCKESKVAAA 173

Query: 187 MQLYDSMLRNGIMPD 201
            ++   ML  G +P+
Sbjct: 174 WEVLCEMLDAGCVPN 188



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 2/194 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  + AA ++  ++ D G  P+++T  +++ G C   R+ +A+ L   +TC    PN
Sbjct: 164 LCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPN 223

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  CK GR+ DA  ++  M   G  A+VVTYS LIDG  K   +  A  +  
Sbjct: 224 VVTYGTLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLA 283

Query: 122 EMCENNISPNIVSYSI--LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            M       + ++Y++      + K   +E+ +     A +     D      L+  Y K
Sbjct: 284 RMVRMGTPSSTLTYNLQHFEGKMVKVDSLEKGMAIHIQAAEKGYKRDDFLSNTLVDMYAK 343

Query: 180 AGRPTEAMQLYDSM 193
            G   EA +++ SM
Sbjct: 344 CGSMVEAERVFRSM 357



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 3/163 (1%)

Query: 50  FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
           F+++    + PN    +ILID  CK  R  D    F  M   G  A+ V Y+ L+ G +K
Sbjct: 1   FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60

Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
            + +  A  +  EM ++   PN+V+Y+ LIDGLCK    + A   F         P +VT
Sbjct: 61  EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVT 119

Query: 170 YAILIRGYCKAGRPTEAM--QLYDSMLRNGIMPDGLLLSTLAD 210
           Y  L+ G    G+   AM  +L +SM   G  PD +  + L D
Sbjct: 120 YNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVD 162


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 108/200 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  LD A +L  ++  +G +PDI TYNT+I   C+ + ++EA  +F  L    +  N
Sbjct: 428 LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVAN 487

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+  LI A  + GR  +   + S+ML  G + +V++Y+ LI    K  N+  +  + E
Sbjct: 488 GITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLE 547

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I PN  SY++LI+ LCK G + +AL      L+  L PD+VTY  LI G CK G
Sbjct: 548 EMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 607

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               A+ L + +    + PD
Sbjct: 608 WTHAALNLLEKLPNENVHPD 627



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 101/195 (51%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + E  L  A +L+  +  +G  PD+ TY+ ++ G C L R   AV++ +++      PN 
Sbjct: 324 LTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNI 383

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +T++ L+ +FC+ G  DDA  M  +ML KG   N   Y+ +I    K   +  A  + +E
Sbjct: 384 VTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQE 443

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      P+I +Y+ +I  LC   LMEEA + F   ++  ++ + +TY  LI    + GR
Sbjct: 444 MKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGR 503

Query: 183 PTEAMQLYDSMLRNG 197
             E ++L   ML +G
Sbjct: 504 WQEGLRLASEMLLHG 518



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 102/178 (57%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L++       L+L  ++   G + D+I+YN +I   C    +D ++ L E++    +KPN
Sbjct: 498 LLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPN 557

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + ++ +LI+  CK G++ DA  +  +ML +G   ++VTY+ LI+G  K     +A ++ E
Sbjct: 558 NFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLE 617

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
           ++   N+ P+IV+Y+ILI   CK  L+++A      A+   ++P+  T+ ++++ + +
Sbjct: 618 KLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  +  Q+  +G   +   YN II   C   +LD+A +L +++     KP+  T+  +
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I   C    M++A  +F  ++E+G  AN +TY+ LI    ++   +    +  EM  +  
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             +++SY+ LI  LCK G ++ ++      +   + P+  +Y +LI   CKAG+  +A++
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALE 579

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L   ML  G+ PD +  +TL
Sbjct: 580 LSKEMLNQGLTPDIVTYNTL 599



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+ +  +  A  L  ++   G   D+ T+N ++ G C L R+ EA +L +++      P+
Sbjct: 222 LVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPS 281

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  L+   C+  + D+A  M  ++    P+ NVV  + +I G      +  A ++YE
Sbjct: 282 VVTYGFLLQGLCRTRQADEACAMLGRL----PEVNVVMLNTVIRGCLTEGKLARATELYE 337

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      P++ +YSIL+ GLCK G    A+       +    P++VTY+ L+  +C+ G
Sbjct: 338 MMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397

Query: 182 RPTEAMQLYDSMLRNG 197
              +A  + D ML  G
Sbjct: 398 MWDDARAMLDQMLAKG 413



 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K     +A+++  ++ ++G  P+I+TY+T++  +C     D+A  + +++       N
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMN 417

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S  +  +I A CK+G++D AT +  +M  +G K ++ TY+ +I     +  M+ A  ++ 
Sbjct: 418 SQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFR 477

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + E  +  N ++Y+ LI  L + G  +E L      L +    DV++Y  LI+  CK G
Sbjct: 478 NLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEG 537

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
               +M L + M+  GI P+
Sbjct: 538 NVDRSMALLEEMVTKGIKPN 557



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 4/212 (1%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D A  + G+L     E +++  NT+I G  +  +L  A +L+E +      P+  T++IL
Sbjct: 299 DEACAMLGRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSIL 354

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           +   CK GR   A  M  +M EKG   N+VTYS L+  + ++     A  + ++M     
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           S N   Y+ +I  LCK G +++A             PD+ TY  +I   C      EA  
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEH 474

Query: 189 LYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           ++ +++  G++ +G+  +TL    L++   QE
Sbjct: 475 IFRNLIEEGVVANGITYNTLIHALLRNGRWQE 506



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 1/177 (0%)

Query: 11  ALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
           AL L  Q+  R  + P   +YN ++      +   +A+ L+ ++   ++ P + TF +  
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
            A C+ GR  DA  +   M   G   + V Y  +I        +  A  + +EM     +
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++ +++ L+ GLC  G + EA       +    +P VVTY  L++G C+  +  EA
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEA 301



 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 76/144 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE ++D ++ L  ++  +G++P+  +YN +I   C   ++ +A++L +++    L P+
Sbjct: 533 LCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 592

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK G    A  +  K+  +    ++VTY+ LI  + K + +  A  + +
Sbjct: 593 IVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLD 652

Query: 122 EMCENNISPNIVSYSILIDGLCKR 145
           +     I PN  ++ +++    ++
Sbjct: 653 KAISGGIVPNERTWGMMVQNFVRQ 676



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%)

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           +SP+  SY++++  L +     +AL  +   L + + P   T+ +  R  C+ GR  +A+
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            L   M R+G +PD +L  T+    +   G  E
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAE 230



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 41/103 (39%)

Query: 99  TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
           +Y+ ++    ++     A  +Y  M  + + P   ++ +    LC+ G   +AL      
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203

Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             +  +PD V Y  +I      G   EA  L D ML  G   D
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAAD 246


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 103/199 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A  +  ++   G  PD+ITYN  +   C     +EA  L E +    L P+ +T+T +I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + F K G +  A  +F++ML KG   +VVTY+ LI  +   Q +  AF  + +M E ++ 
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            N+++Y+ +I+GLC    M+EA   F    +  +LP+  +Y ILI   C  G   EA++L
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 190 YDSMLRNGIMPDGLLLSTL 208
           Y  ML   I PD    S  
Sbjct: 658 YREMLDRKIQPDSFTHSVF 676



 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 110/201 (54%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A  LF +L  R L P +ITYNT+I G C    LD A++L +++T   L P+  T+TI
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++   K G +  A   F++ML KG K +   Y+  I G  K  +   AF + EEM    
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++++Y++ +  LC++G  EEA       + + L+PD VTY  +I G+ K G   +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           ++++ ML  G+ P  +  + L
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVL 571



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 111/195 (56%), Gaps = 1/195 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++ + + A  L   +   GL PD +TY +II G+     L +A ++F ++    + P+
Sbjct: 505 LCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPS 564

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LI A   +  +D A M FSKMLEK   ANV+TY+ +I+G   ++ M  A+  ++
Sbjct: 565 VVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFD 624

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I PN  SY+ILI+  C  G  EEAL  +   LD  + PD  T+++ ++   +  
Sbjct: 625 EMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDY 684

Query: 182 RPTEAMQLYDSMLRN 196
           +   A+Q  +S+++N
Sbjct: 685 Q-VHAVQCVESLIQN 698



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 112/208 (53%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L  E  L  A  ++G +   G++P ++TYNT++  YC   R+D+A++L  ++      P
Sbjct: 189 VLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYP 248

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N +T+ +L++   K+G ++ A  +  +ML  G   +  TY+ LI+G+ +      AFD+ 
Sbjct: 249 NDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLV 308

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EEM      P + +Y+ L+ GLCK   +      F   L +   PD+V++  L+ GYC+ 
Sbjct: 309 EEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRT 368

Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           G  +EA  L+D +    ++P  +  +TL
Sbjct: 369 GCISEAFLLFDELKCRDLVPTVITYNTL 396



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 108/204 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A   F ++  +GL+PD   YNT I G   +     A  + E++      P+ IT+ 
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYN 499

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           + + A C++G  ++A  +   M+  G   + VTY+ +I+G+ K+ +++ A +V+ EM   
Sbjct: 500 VFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSK 559

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++P++V+Y++LI     + +++ A   F   L+  +  +V+TY  +I G C   R  EA
Sbjct: 560 GVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEA 619

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            + +D M   GI+P+    + L +
Sbjct: 620 YKYFDEMEEKGILPNKFSYTILIN 643



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  L+ A  L  ++ + GL     TYN +I G+C      EA  L E++   +  P 
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPT 319

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+   CK  ++    + FS ML+     ++V+++ L+ GY ++  +  AF +++
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+   ++ P +++Y+ LI GLC  G ++ AL       D  L PD+ TY IL+ G  K G
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLST 207
             + A   ++ ML  G+ PD    +T
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYNT 465



 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 105/197 (53%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L +F ++   GL PD+   N I+      N L +A  ++  +    +KP  +T+  ++D+
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           +CKEGR+D A  + S+M E+G   N VTY+ L++G  K   ++ A  + EEM  + ++ +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
             +Y+ LI+G C++GL  EA       ++    P + TY  L+ G CK  + T     + 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 192 SMLRNGIMPDGLLLSTL 208
            ML++   PD +  ++L
Sbjct: 345 DMLKSKFTPDIVSFNSL 361



 Score = 43.5 bits (101), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           V+++M  N + P++ + + ++  L    L+ +A   +       + P VVTY  ++  YC
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           K GR  +A++L   M   G  P+ +  + L +  L   G  E 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVN-GLSKKGELEQ 268


>gi|222619024|gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japonica Group]
          Length = 428

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 101/199 (50%), Gaps = 4/199 (2%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+++F  +     +PD  +YNT+I G C   RL EA  LF ++      P  +T+T 
Sbjct: 28  IDDAVRVFRNIP----KPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTT 83

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI    +E   DDA  +F +M  +G   NVVTYS LIDG  K     SA ++ + M +  
Sbjct: 84  LIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKER 143

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             PN ++YS +IDGLCK G + +A+            PD   +  LI G C AGR  EA 
Sbjct: 144 KLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEAS 203

Query: 188 QLYDSMLRNGIMPDGLLLS 206
              D M   GI P+ L  S
Sbjct: 204 NYLDEMNFAGIRPNRLTWS 222



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 6/189 (3%)

Query: 22  GLEPDIITYNTIICGYCS--LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           G  P   TYN ++  +CS     +D+AV++F  +     KP++ ++  +ID  C+ GR+ 
Sbjct: 5   GFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIP----KPDACSYNTVIDGLCRRGRLP 60

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +A  +F++M+  G    VVTY+ LI    +      A  +++EM    I PN+V+YS LI
Sbjct: 61  EARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLI 120

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           DGLCK G    A+      +    LP+ +TY+ +I G CK G   +AM++ D M   G  
Sbjct: 121 DGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRK 180

Query: 200 PDGLLLSTL 208
           PD  L   L
Sbjct: 181 PDAGLFGKL 189



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 6/153 (3%)

Query: 60  PNSITFTILIDAFCKEGR--MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
           P + T+ +L+ A C +    +DDA  +F  +    PK +  +Y+ +IDG  +   +  A 
Sbjct: 8   PTTATYNVLVKAHCSDAAVPIDDAVRVFRNI----PKPDACSYNTVIDGLCRRGRLPEAR 63

Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
           D++ EM  N  +P +V+Y+ LI  L +    ++AL  F       ++P+VVTY+ LI G 
Sbjct: 64  DLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGL 123

Query: 178 CKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           CK GR   A++L D M++   +P+ +  S++ D
Sbjct: 124 CKGGRAASAVELLDRMVKERKLPNTITYSSVID 156



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
            L +E   D ALKLF ++  RG+ P+++TY+++I G C   R   AV+L +++   +  P
Sbjct: 87  WLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLP 146

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N+IT++ +ID  CKEG +  A  +  +M  +G K +   +  LI G   +     A +  
Sbjct: 147 NTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYL 206

Query: 121 EEMCENNISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
           +EM    I PN +++S+       ++  LC +G +  A   +       +     T+ +L
Sbjct: 207 DEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLL 266

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMP-----DGLLLSTLADYNLQSSGS-QEH 221
           +    K     +A  +   ML    +P     D ++ +  +   L++ GS QE+
Sbjct: 267 VECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKKKLRAVGSVQEY 320



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 7/204 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   L  A  LF ++   G  P ++TY T+I         D+A++LF+++    + PN
Sbjct: 53  LCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPN 112

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T++ LID  CK GR   A  +  +M+++    N +TYS +IDG  K   +  A ++ +
Sbjct: 113 VVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILD 172

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI-------LI 174
            M      P+   +  LI GLC  G   EA           + P+ +T+++       ++
Sbjct: 173 RMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVV 232

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGI 198
              C  G    A Q+Y SM   GI
Sbjct: 233 TALCSKGEVVRAFQVYQSMRTRGI 256


>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
 gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 693

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++ + GL PD + Y T+I GYC+L R D+A Q F  L      P+  T TILI 
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + G + DA  +F  M  +G K +VVTY+ L+ GY K+  +   F++ +EM    ISP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511

Query: 131 NIVSYSILID-----------------------------------GLCKRGLMEEALYAF 155
           ++ +Y+ILI                                    G  KRG  +EA   +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               D  + PDVVT + L+ GYCKA R  +A+ L++ +L  G+ PD +L +TL
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624



 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 110/191 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +   GL+ D++TYN ++ GY   ++L++  +L +++    + P+  T+ ILI 
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           +    G +D+A  + S+++ +G   + + ++ +I G+ K  + + AF ++  M +  + P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+ S L+ G CK   ME+A+  F+  LD  L PDVV Y  LI GYC  G   +A +L 
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641

Query: 191 DSMLRNGIMPD 201
             M++ G++P+
Sbjct: 642 GLMVQRGMLPN 652



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+   +L  ++   G+ PD+ TYN +I        +DEA ++  +L      P+++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            FT +I  F K G   +A +++  M +   K +VVT S L+ GY K+Q M+ A  ++ ++
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++V Y+ LI G C  G +E+A       +   +LP+  T+  L+ G    G+ 
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL--EGKR 667

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
               + + SML   I+        +A ++L S G
Sbjct: 668 FVNSETHASMLLEEII--------VAKWHLTSGG 693



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 9/212 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +  +L   G+  D ++ +++I G+C + + +EA++L       +L+PN
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++  +   C  G M  A+ +F ++ E G   + V Y+ +IDGY        AF  + 
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++   P++ + +ILI    + G + +A   F       L  DVVTY  L+ GY K  
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           +  +  +L D M   GI PD      +A YN+
Sbjct: 493 QLNKVFELIDEMRSAGISPD------VATYNI 518



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E  ++ ALKL  ++   G+ P      +++     ++ L+ A +  E +       N+
Sbjct: 212 IRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNA 271

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
              ++ I  +C +G  D    +   M   G + ++V ++  ID   K+  +K A  V  +
Sbjct: 272 AVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK 331

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFH------------------CALDN--- 161
           +    IS + VS S +IDG CK G  EEA+   H                  C+  +   
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391

Query: 162 -----------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                       LLPD V Y  +I GYC  GR  +A Q + ++L++G  P  L  ST+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTI 448


>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
 gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 35/233 (15%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F ++ + GL PD + Y T+I GYC+L R D+A Q F  L      P+  T TILI 
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A  + G + DA  +F  M  +G K +VVTY+ L+ GY K+  +   F++ +EM    ISP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511

Query: 131 NIVSYSILID-----------------------------------GLCKRGLMEEALYAF 155
           ++ +Y+ILI                                    G  KRG  +EA   +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571

Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               D  + PDVVT + L+ GYCKA R  +A+ L++ +L  G+ PD +L +TL
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 110/191 (57%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  +F  +   GL+ D++TYN ++ GY   ++L++  +L +++    + P+  T+ ILI 
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           +    G +D+A  + S+++ +G   + + ++ +I G+ K  + + AF ++  M +  + P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+ S L+ G CK   ME+A+  F+  LD  L PDVV Y  LI GYC  G   +A +L 
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641

Query: 191 DSMLRNGIMPD 201
             M++ G++P+
Sbjct: 642 GLMVQRGMLPN 652



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   L+   +L  ++   G+ PD+ TYN +I        +DEA ++  +L      P+++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
            FT +I  F K G   +A +++  M +   K +VVT S L+ GY K+Q M+ A  ++ ++
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + P++V Y+ LI G C  G +E+A       +   +LP+  T+  L+ G    G+ 
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL--EGKR 667

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
               + + SML   I+        +A ++L S G
Sbjct: 668 FVNSETHASMLLEEII--------VAKWHLTSGG 693



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 9/212 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L  A  +  +L   G+  D ++ +++I G+C + + +EA++L       +L+PN
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPN 372

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              ++  +   C  G M  A+ +F ++ E G   + V Y+ +IDGY        AF  + 
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            + ++   P++ + +ILI    + G + +A   F       L  DVVTY  L+ GY K  
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 213
           +  +  +L D M   GI PD      +A YN+
Sbjct: 493 QLNKVFELIDEMRSAGISPD------VATYNI 518



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           I+E  ++ ALKL  ++   G+ P      +++     ++ L+ A +  E +       N+
Sbjct: 212 IRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNA 271

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
              ++ I  +C +G  D    +   M   G + ++V ++  ID   K+  +K A  V  +
Sbjct: 272 AVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK 331

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFH------------------CALDN--- 161
           +    IS + VS S +IDG CK G  EEA+   H                  C+  +   
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391

Query: 162 -----------HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
                       LLPD V Y  +I GYC  GR  +A Q + ++L++G  P  L  ST+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTI 448


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 116/206 (56%), Gaps = 2/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   ++ A++L   +  RG +PD+ T+NT +  YC+L ++++ + L +++    LKP+ +
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIV 568

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +ID +CK   +  A     ++++ G + N V Y+ LI GY ++ ++  A  V + M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNHLLPDVVTYAILIRGYCKAGR 182
             N I P  ++Y+ L+  +C  GL+EEA   F  C L N  L  V+ Y I+I+G+CK G+
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIEL-GVIGYTIIIQGFCKIGK 687

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA+  +  M    I P+ +  +TL
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTL 713



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 107/197 (54%)

Query: 12  LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
           L L  Q+   GL+PDI+TY TII GYC    + +A +   +L    L+PN++ +  LI  
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611

Query: 72  FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
           + + G + DA  +   M   G +   +TY+ L+     +  ++ A +++ +    NI   
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELG 671

Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
           ++ Y+I+I G CK G ++EA+  F       + P+ +TY  L+  YCK G   EA +L+D
Sbjct: 672 VIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFD 731

Query: 192 SMLRNGIMPDGLLLSTL 208
            M+ +GI+PD +  +TL
Sbjct: 732 EMVSSGIVPDTVSYNTL 748



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 1/212 (0%)

Query: 7   HLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
            LD A K+FG++ D   + PD+ TY  +I   C    +D A  +  +L    ++P  +T+
Sbjct: 195 QLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTY 254

Query: 66  TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
            +L+DA C+ GR+++A  +  +M+E   + ++VT+  LI+G  + Q       V +EM  
Sbjct: 255 NVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEG 314

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             I+PN V Y+ LI   C+ G   EAL  F   +   +   VVTY ++ +  CK G    
Sbjct: 315 FGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 374

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           A Q+ D ML  G+     L +++  ++L+ +G
Sbjct: 375 AEQILDEMLLAGMTVHCSLFNSVVAWHLRGTG 406



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 36/243 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTI---ICG---------------------YCS 39
           +E H   AL+LF ++  +G++  ++TYN I   +C                      +CS
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392

Query: 40  L------------NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           L             RLD  ++L  ++    LKPN    T  I   CK G+ ++A  ++  
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           +L KG   N+ T + LI G  +  NMK A  V + M ++ +  + ++Y+I+I   CK   
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK 512

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
           MEEA+      +     PD+ T+   +R YC  G+  + + L D M   G+ PD +   T
Sbjct: 513 MEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGT 572

Query: 208 LAD 210
           + D
Sbjct: 573 IID 575



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 12/220 (5%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF-EKLTCVQLKPNSITFT 66
           L  A   F +L+ RG  P I T N ++       +LD A ++F E      + P+  T+T
Sbjct: 161 LSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYT 220

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ++I A C+ G +D A +M +++   G +  VVTY+ L+D   +S  ++ AF +   M E 
Sbjct: 221 VMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEG 280

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+IV++ ILI+GL +     E            + P+ V Y  LI  +C+ G  +EA
Sbjct: 281 RLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340

Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSS-----GSQEH 221
           ++L+D M+  GI        T+  YNL +      G  EH
Sbjct: 341 LRLFDEMVSKGIK------QTVVTYNLIAKALCKEGEMEH 374



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 108/207 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + A +++  +  +GL  +I T N +I G C  N + EA ++ + +    ++ +
Sbjct: 437 LCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFD 496

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+ I+I   CK  +M++A  +   M+++G K ++ T++  +  Y     ++    + +
Sbjct: 497 RITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLD 556

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M    + P+IV+Y  +IDG CK   + +A       + N L P+ V Y  LI GY + G
Sbjct: 557 QMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNG 616

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
             ++A+ + D+M  NGI P  +  ++L
Sbjct: 617 SISDAIGVLDTMKHNGIQPTPITYNSL 643



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 78/134 (58%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +   +   G++P  ITYN+++   C    ++EA ++F +     ++   I +TI+I 
Sbjct: 621 AIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQ 680

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G++D+A M F +M  +  + N +TY+ L+  Y K  N + AF +++EM  + I P
Sbjct: 681 GFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVP 740

Query: 131 NIVSYSILIDGLCK 144
           + VSY+ LI G C+
Sbjct: 741 DTVSYNTLISGCCE 754



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +DAA  +  +L   G++P ++TYN ++   C   R++EA QL  ++   +L+P+
Sbjct: 226 LCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPS 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF ILI+   +  R  +   +  +M   G   N V Y+ LI  + +  +   A  +++
Sbjct: 286 IVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFD 345

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA-------LYA---FHCALDNHLLPDVVTYA 171
           EM    I   +V+Y+++   LCK G ME A       L A    HC+L N ++      A
Sbjct: 346 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV------A 399

Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
             +RG    GR    ++L   M+   + P+  +++ 
Sbjct: 400 WHLRG---TGRLDVVLRLIREMVARFLKPNDAVMTA 432



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ H   A K   +L   GL P+ + YN +I GY     + +A+ + + +    ++P  I
Sbjct: 581 KDVH--KANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  L+   C  G +++A  +F++ + K  +  V+ Y+ +I G+ K   +  A   ++EM
Sbjct: 639 TYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
              +I PN ++Y+ L+   CK G  EEA   F   + + ++PD V+Y  LI G C+
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCE 754



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 4/215 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +DA L+   ++   G+ P+ + YN +I  +C      EA++LF+++    +K   +T+ 
Sbjct: 304 EVDAVLQ---EMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYN 360

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK-SQNMKSAFDVYEEMCE 125
           ++  A CKEG M+ A  +  +ML  G   +   ++ ++  + + +  +     +  EM  
Sbjct: 361 LIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVA 420

Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
             + PN    +  I  LCKRG  EEA   +   L   L  ++ T   LI G C+     E
Sbjct: 421 RFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKE 480

Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           A ++  +M+ +G+  D +  + +  +  ++S  +E
Sbjct: 481 ATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEE 515



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTY 170
           ++  A D + E+     SP+I + +IL++ L   G ++ A   F    D N + PDV TY
Sbjct: 160 SLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTY 219

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            ++I+  C+AG    A  +   + R+GI P  +  + L D   +S   +E
Sbjct: 220 TVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEE 269


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 114/230 (49%), Gaps = 8/230 (3%)

Query: 2   LIKECHLDAALKLFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           ++ E  L    K FG   ++  RG  PD+ITYN  I G   L  L EA +L +K+    L
Sbjct: 454 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 513

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            P+ +T+T +I A    G +  A  +F +ML KG   +VVTY+ LI  Y     +K A  
Sbjct: 514 VPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 573

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            + EM E  + PN+++Y+ LI+GLCK   M++A   F       + P+  TY ILI   C
Sbjct: 574 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC 633

Query: 179 KAGRPTEAMQLYDSMLRNGIMPD-----GLLLSTLADYNLQSSGSQEHCI 223
             G   EA++LY  ML   I PD      LL     DY L      E+ I
Sbjct: 634 NLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVI 683



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 106/202 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A  LF +L  R L P ++TYNT+I G C L  LD A++L +++      P+  TFT
Sbjct: 357 NIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFT 416

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
             +  FCK G +  A  +F +ML +G + +   Y   I G  K  +   AF + EEM   
Sbjct: 417 TFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
              P++++Y++ IDGL K G ++EA       L N L+PD VTY  +I  +  AG   +A
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 536

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+  ML  GI P  +  + L
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVL 558



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 112/214 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A KL   + ++ L PD+++YNT+I GY  L  + EA  LF +L    L P+
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  C+ G +D A  +  +M++ GP  +V T++  + G+ K  N+  A ++++
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+  +Y   I G  K G   +A       L     PD++TY + I G  K G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
              EA +L   ML NG++PD +  +++   +L +
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++ ++D A +++  + + G+ P ++TYNT++  +C    + EA+QL  ++  +   PN +
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L++     G M+ A  +   ML  G + +V TY  LI GY +   ++ A  + EEM
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P +V+Y+ ++ GLCK G + +A       ++ +L+PD+V+Y  LI GY + G  
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L+  +    + P  +  +TL D
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLID 385



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 109/217 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A +LF ++ +RGL+PD   Y T I G   L    +A  + E++      P+ I
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 483

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ + ID   K G + +A+ +  KML  G   + VTY+ +I  +  + +++ A  ++ EM
Sbjct: 484 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEM 543

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y++LI     RG ++ A+  F    +  + P+V+TY  LI G CK  + 
Sbjct: 544 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 603

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A   +  M   GI P+    + L + N      QE
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQE 640



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 110/206 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  AL+L  Q+   G  P+ +TYN ++ G      +++A +L + +  + L+ +  
Sbjct: 214 KKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVY 273

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +C++G++++A+ +  +ML +G    VVTY+ ++ G  K   +  A  + + M
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
              N+ P++VSY+ LI G  + G + EA   F       L P VVTY  LI G C+ G  
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDL 393

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
             AM+L D M+++G  PD    +T  
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFV 419



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 109/207 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  ++ A +L  ++  RG  P ++TYNTI+ G C   R+ +A +L + +    L P+ +
Sbjct: 284 EKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 343

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  LI  + + G + +A ++F+++  +    +VVTY+ LIDG  +  ++  A  + +EM
Sbjct: 344 SYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEM 403

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++   P++ +++  + G CK G +  A   F   L+  L PD   Y   I G  K G P
Sbjct: 404 IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 463

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A  + + ML  G  PD +  +   D
Sbjct: 464 SKAFGMQEEMLARGFPPDLITYNVFID 490



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 36/189 (19%)

Query: 56  VQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG--PKAN----------------- 96
           V +    +   +L+  + K+  ++   ++F KM+ KG  P                    
Sbjct: 125 VSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNID 184

Query: 97  -----------------VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
                            VVTY+ ++D + K   ++ A  +  +M     SPN V+Y++L+
Sbjct: 185 VAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLV 244

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
           +GL   G ME+A       L   L   V TY  LIRGYC+ G+  EA +L + ML  G +
Sbjct: 245 NGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAV 304

Query: 200 PDGLLLSTL 208
           P  +  +T+
Sbjct: 305 PTVVTYNTI 313



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 52/184 (28%)

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV-----------SYSIL 138
           + G K + ++YS ++D   ++  M+SA+ V E++    +   ++           S  ++
Sbjct: 74  QTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLI 133

Query: 139 IDGL----CKRGLMEEALYAFHCALDNHLLPD---------------------------- 166
           +D L     K+ L+E+ L  F+  +   LLPD                            
Sbjct: 134 LDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVM 193

Query: 167 --------VVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
                   VVTY  ++  +CK G   EA+QL   M   G  P+ +  + L +  L  SG 
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVN-GLSHSGE 252

Query: 219 QEHC 222
            E  
Sbjct: 253 MEQA 256


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 119/219 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +  A +   ++ ++G  PD  TYNTII GYC  + L EA +L +        P+
Sbjct: 194 LCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPD 253

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  C EG ++ A  +F++   K  K ++V Y+ L+ G  +   +  A  V  
Sbjct: 254 RVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMN 313

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+   P+I +Y+I+I+GLCK G + +A    + A+    LPDV T+  +I GYCK  
Sbjct: 314 EMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRL 373

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
           +   A+QL + M   GI PD +  +++ +   ++  ++E
Sbjct: 374 KLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412



 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 115/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  ++ AL+LF +   + L+PD++ YN+++ G C    +  A+Q+  ++      P+
Sbjct: 264 LCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPD 323

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+ I+I+  CK G + DA ++ +  + KG   +V T++ +IDGY K   + SA  + E
Sbjct: 324 IWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVE 383

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    I+P+ ++Y+ +++GLCK G  +E    F   +     P+ +TY ILI  +CK  
Sbjct: 384 RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 443

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  +   M ++G++PD +  +TL
Sbjct: 444 QLEEASGVIVRMSQDGLVPDTISFNTL 470



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 106/191 (55%)

Query: 20  DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMD 79
           D  + PD++TYNT++ G C  +++ EA Q   ++      P+  T+  +ID +CK   + 
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 80  DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILI 139
           +AT +    + KG   + VTY  LI+G     +++ A +++ E    ++ P++V Y+ L+
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 140 DGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIM 199
            GLC++GL+  AL   +  +++   PD+ TY I+I G CK G  ++A  + +  +  G +
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 200 PDGLLLSTLAD 210
           PD    +T+ D
Sbjct: 357 PDVFTFNTMID 367



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 102/187 (54%)

Query: 15  FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
           F ++  +G  P+ ITYN +I  +C +N+L+EA  +  +++   L P++I+F  LI  FC+
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCR 476

Query: 75  EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
            G +D A ++F K+ EKG  A   T++ LI  Y    NM+ A  ++ EM      P++ +
Sbjct: 477 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 536

Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
           Y +L+DG CK   ++ A       +    +P + T+  ++       R +EA+ +   M+
Sbjct: 537 YRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMV 596

Query: 195 RNGIMPD 201
           R G++P+
Sbjct: 597 RMGVVPE 603



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           +G  PD+ T+NT+I GYC   +LD A+QL E++    + P++IT+  +++  CK G+  +
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
               F +M+ KG + N +TY+ LI+ + K   ++ A  V   M ++ + P+ +S++ LI 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G C+ G ++ A   F    +        T+ ILI  Y        A +++  M+  G  P
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 201 DGLLLSTLAD 210
           D      L D
Sbjct: 533 DLYTYRVLVD 542



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL+L   L +RG +   + Y T++ G  +     +A  LF+++    + P+  TF  ++ 
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C++G + ++  + +K+L++G   N  T +  I G  +   ++ A  + E M +  I+P
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAP 182

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++V+Y+ L+ GLCK   ++EA       ++   +PD  TY  +I GYCK     EA +L 
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 191 DSMLRNGIMPD 201
              +  G +PD
Sbjct: 243 KDAIFKGFVPD 253



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 1/209 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+   + D A K++ ++   G+ PD  T+   I  +C   R   A++L   L        
Sbjct: 20  LVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVK 79

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  ++      G   DA  +F +ML +    +V T++ ++    +  ++  +  +  
Sbjct: 80  PLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLA 139

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ +  +S N  + +I I GLC+ G +EEA+ A   ++D ++ PDVVTY  L+RG CK  
Sbjct: 140 KVLKRGMSVNKFTCNIWIRGLCEGGRLEEAV-ALVESMDAYIAPDVVTYNTLMRGLCKDS 198

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA Q    M+  G +PD    +T+ D
Sbjct: 199 KVQEAAQYLRRMMNQGCIPDDFTYNTIID 227



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 85/162 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L+ A  +  +++  GL PD I++NT+I G+C    LD A  LF+KL        + TF 
Sbjct: 444 QLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 503

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           ILI A+  +  M  A  +F +M+ KG K ++ TY  L+DG  K+ N+  A+    EM   
Sbjct: 504 ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSK 563

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
              P++ ++  +++ L     + EA+   H  +   ++P+VV
Sbjct: 564 GFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 12/158 (7%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           LD A  LF +L ++G      T+N +I  Y S   +  A ++F ++     KP+  T+ +
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK   +D A +  ++M+ KG   ++ T+  +++    +  +  A  +   M    
Sbjct: 540 LVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599

Query: 128 ISPNIV------------SYSILIDGLCKRGLMEEALY 153
           + P +V            +  IL++ L K+G +    Y
Sbjct: 600 VVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYPTY 637



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 5/145 (3%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A K+FG++  +G +PD+ TY  ++ G C    +D A     ++      P+  TF 
Sbjct: 514 NMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFG 573

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            ++++     R+ +A  +   M+  G    VV      D   K +       V E M + 
Sbjct: 574 RVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTD---KKEIAAPKILVEELMKKG 630

Query: 127 NISPNIVSYSILIDGLCKRGLMEEA 151
           +IS    +Y +L +G+    L  +A
Sbjct: 631 HIS--YPTYEVLHEGVRDNKLTRKA 653


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 110/204 (53%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++  ++ D G+  ++  YNT+I G C L R++E  ++ +++  V ++P+  ++ 
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LID +C+EG M  A  M   M+  G  A  +TY+ L+ G+     +  A  ++  M + 
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            ++PN +S S L+DGL K G  E+AL  +   L   L  +V+T+  +I G CK GR  EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L D M      PD L   TL D
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFD 542



 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 2/214 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT-CVQLKPNSITFTILI 69
           A ++   L  +GL P+++TY  ++ GYC   R++EA ++ +++     +  + + + ++I
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMI 331

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
           + +C+ GRMDDAT + ++M + G   N+  Y+ +I+G  K   M+    V +EM +  + 
Sbjct: 332 NGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMR 391

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P+  SY+ LIDG C+ G M +A       + N L    +TY  L++G+C      +A++L
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRL 451

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
           +  ML+ G+ P+ +  STL D  L  +G  E  +
Sbjct: 452 WFLMLKRGVAPNEISCSTLLD-GLFKAGKTEQAL 484



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL L+ +   RGL  ++IT+NT+I G C + R+ EA +L +++  ++  P+
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S+T+  L D +CK G++  AT + +KM   G   +V  ++  I G+F ++      D++ 
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    +SPN+V+Y  LI G CK G + EA   +   ++N + P+V   + L+  + K G
Sbjct: 594 EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEG 653

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  EA  +   ++   ++P G  +ST+
Sbjct: 654 KVDEANLVLQKLVNIDMIP-GCSISTI 679



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++   K+  ++ D G+ PD  +YNT+I GYC    + +A ++   +    L   
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+  FC    +DDA  ++  ML++G   N ++ S L+DG FK+   + A ++++
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E     ++ N+++++ +I+GLCK G M EA        +    PD +TY  L  GYCK G
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           +   A  L + M   G  P
Sbjct: 549 QLGTATHLMNKMEHLGFAP 567



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 16/189 (8%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           + +N II G C   R+ +A  LFE L   +  P++ T++ LI      G +D+A  +   
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG- 146
           ML  G   N++TY+ LI G  KS  +  A +++ ++    ISPN ++Y+ LID  CK G 
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 147 ---------------LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
                           MEEA+      ++N++ P+ +TY  LI GY K+G   E  +LYD
Sbjct: 821 TTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880

Query: 192 SMLRNGIMP 200
            M   G++P
Sbjct: 881 EMHIRGLLP 889



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 1/201 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  ++GQ+   G+ PD  T   +   YC   R+ +AV+  E++  + L+ N + +  ++D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-NNIS 129
            +C  G  +DA  +   +  KG   NVVTY+ L+ GY K   M+ A  V +EM E  +I 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
            + V+Y ++I+G C+RG M++A    +   D  +  ++  Y  +I G CK GR  E  ++
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 190 YDSMLRNGIMPDGLLLSTLAD 210
              M   G+ PD    +TL D
Sbjct: 382 LQEMEDVGMRPDKYSYNTLID 402



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 35/240 (14%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  +  A ++   +   GL    +TYNT++ G+CSL+ +D+A++L+  +    + PN I
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           + + L+D   K G+ + A  ++ + L +G   NV+T++ +I+G  K   M  A ++ + M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALY----------------------------AF 155
            E    P+ ++Y  L DG CK G +  A +                             +
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 156 HCALDNH-------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           H   D H       L P++VTY  LI G+CK G   EA  LY  M+ NG+ P+  + S L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645



 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 26/228 (11%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN-- 61
           KE +L  A  L+ ++ + G+ P++   + ++  +    ++DEA  + +KL  + + P   
Sbjct: 616 KEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCS 675

Query: 62  ------------------------SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANV 97
                                   ++ + ++I   CK GR+ DA  +F  +  K    + 
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735

Query: 98  VTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHC 157
            TYS LI G   S ++  AF + + M    ++PNI++Y+ LI GLCK G +  A+  F+ 
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795

Query: 158 ALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
                + P+ +TY  LI  YCK G+ TEA +L   M+  G M + + L
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKL 843



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 27/243 (11%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            L  A  L  ++   G  P +  +N+ I G+    +  +   +  +++   L PN +T+ 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI  +CKEG + +A  ++ +M+  G   NV   S L+  ++K   +  A  V +++   
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 127 NISPNI--------------------------VSYSILIDGLCKRGLMEEALYAFHCALD 160
           ++ P                            V ++++I GLCK G + +A   F    +
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN 728

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
              LPD  TY+ LI G   +G   EA  L D ML  G+ P+ +  ++L  Y L  SG   
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI-YGLCKSGKLS 787

Query: 221 HCI 223
             +
Sbjct: 788 RAV 790



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 2/189 (1%)

Query: 11  ALKLFGQLTD--RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           A  LF  L +  R      ++++ ++  +    +L  A+ +F+ +  V  +P+  +   L
Sbjct: 130 AEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRL 189

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           ++   + G    A M++ +M   G   +  T + +   Y +   +  A +  EEM    +
Sbjct: 190 LNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGL 249

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             N+V+Y  ++D  C  G  E+A           L P+VVTY +L++GYCK GR  EA +
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 189 LYDSMLRNG 197
           +   M   G
Sbjct: 310 VVKEMKETG 318



 Score = 40.4 bits (93), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 38/61 (62%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +++E +++ A+KL  Q+ +  ++P+ ITY T+I GY     ++E  +L++++    L P 
Sbjct: 831 MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890

Query: 62  S 62
           +
Sbjct: 891 N 891


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 6/201 (2%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------TCVQLKPNSITFTI 67
           L  ++ D  ++P +IT+  +I   C   R+D+A+++FEK+      T V + P++I +  
Sbjct: 174 LMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNT 233

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK GR ++A  +  KM          T++CLI+GY +S  ++ A  ++ EM    
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           I PN+++ + L+DG+CK   +  A+  F       L  + VTY + I  +C      +AM
Sbjct: 294 IEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAM 353

Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
           +  D M ++G  PD ++  TL
Sbjct: 354 EFLDEMSKDGCFPDAVVYYTL 374



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 102/210 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + AL L G++      P   T+N +I GYC    ++ A +LF ++   Q++PN
Sbjct: 238 LCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPN 297

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT   L+D  CK  R+  A   F  M +KG K N VTY+  I+ +    NM  A +  +
Sbjct: 298 VITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLD 357

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM ++   P+ V Y  LI GL + G +++A        +     D V Y +LI  +CK  
Sbjct: 358 EMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKN 417

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           +   A +  + M   G+ PD +  +TL  Y
Sbjct: 418 KLDRAQEWLNEMELAGVKPDSVTYNTLISY 447



 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 3/198 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +++ A++   +++  G  PD + Y T+ICG     RLD+A  +  KL       + + + 
Sbjct: 348 NMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYN 407

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI  FCK+ ++D A    ++M   G K + VTY+ LI  + K  N K A    ++M E 
Sbjct: 408 VLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEE 467

Query: 127 -NISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRP 183
             +SP + +Y  LI   C    ++EA+  F     + + + P+ V Y ILI   CK  + 
Sbjct: 468 EGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQV 527

Query: 184 TEAMQLYDSMLRNGIMPD 201
             A+ L D M   G+MP+
Sbjct: 528 NFALSLLDDMKFRGVMPN 545



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 7/215 (3%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   LD A  +  +L + G   D + YN +I  +C  N+LD A +   ++    +KP+
Sbjct: 378 LAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPD 437

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           S+T+  LI  F K G    A     KM E+ G    V TY  LI  Y  + N+  A  ++
Sbjct: 438 SVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIF 497

Query: 121 EEMCENNIS----PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
           +EM  NN++    PN V Y+ILID LCK+  +  AL          ++P+  TY  + + 
Sbjct: 498 KEM--NNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKA 555

Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
                   +A +L D M+     PD + +  L ++
Sbjct: 556 LRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEW 590



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 29/180 (16%)

Query: 31  NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
           N ++ G        +   L  K+  + ++P  ITF ILI+  CK  R+DDA  +F KM  
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKM-- 213

Query: 91  KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
           KG K     +                           ++P+ + Y+ LIDGLCK G  EE
Sbjct: 214 KGEKEETKVF---------------------------VAPDTIMYNTLIDGLCKVGRQEE 246

Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           AL        +   P   T+  LI GYC++G    A +L++ M    I P+ + L+TL D
Sbjct: 247 ALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVD 306



 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 3/139 (2%)

Query: 11  ALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK--PNSITFTI 67
           A K   ++T+  GL P + TY  +I  YC  N +DEA+++F+++  V  K  PN++ + I
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID+ CK+ +++ A  +   M  +G   N  TY+ +         +  AF + + M E  
Sbjct: 517 LIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQA 576

Query: 128 ISPNIVSYSILIDGLCKRG 146
            +P+ ++  IL + L   G
Sbjct: 577 CNPDYITMEILTEWLSAVG 595



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNS 62
           K+  LD A +   ++   G++PD +TYNT+I  +  +     A +  +K+T  + L P  
Sbjct: 415 KKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTV 474

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVY 120
            T+  LI A+C    +D+A  +F +M     K   N V Y+ LID   K   +  A  + 
Sbjct: 475 FTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLL 534

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           ++M    + PN  +Y+ +   L  +  +++A       ++    PD +T  IL       
Sbjct: 535 DDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAV 594

Query: 181 GRPTE 185
           G  T+
Sbjct: 595 GEITK 599


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + + HL  AL+LF ++ + G  PD +TYNT+I   CSL +L +A+ L + +       ++
Sbjct: 404 VGDPHL--ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+  +ID  CK+ R+++A  +F +M  +G   N +T++ LIDG  K + +  AF++  +
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN ++Y+ ++   CK+G +++A         N    DVVTY  LI G CKAGR
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A+++   M   G+ P
Sbjct: 582 TQVALKVLRGMRIKGMRP 599



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +  Q+ DRG  PDI T+NT+I   C+ NRL+EA+ L  ++T   + P+
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+A CK G    A  +F +M   G   + VTY+ LID       +  A D+ +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M       + ++Y+ +IDGLCK+  +EEA   F       +  + +T+  LI G CK  
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A +L + M+  G+ P+ +  +++
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSI 537



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 36/230 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   +   G     ITYNTII G C   R++EA ++F+++    +  N+ITF  
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK+ ++DDA  + ++M+ +G + N +TY+ ++  Y K  ++K A D+ E M  N 
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 128 ISPNIVSYSILIDGLCK-----------RGL------------------------MEEAL 152
              ++V+Y  LI+GLCK           RG+                        + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
             F    +    PD +TY I+ RG C+ G P  EA      M+  G +P+
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 108/195 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++  RG++PD++T+NT++   C  +++  AV + E+++   + P+  TFT L+  F 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +EG ++ A  + ++MLE G  A  VT + LI+GY K   ++ A    ++   +   P+ +
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+  ++GLC+   +  AL      +     PDV TY I++   CK G+  EA  + + M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 194 LRNGIMPDGLLLSTL 208
           +  G +PD    +TL
Sbjct: 348 VDRGCLPDITTFNTL 362



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  ++AAL++  ++ + G     +T N +I GYC L R+++A+   ++      +P+
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+   ++  C+   +  A  +   M+++G   +V TY+ +++   K+  ++ A  +  
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+I +++ LI  LC    +EEAL          + PDV T+ ILI   CK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            P  A++L++ M  +G  PD +  +TL D NL S G 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLID-NLCSLGK 441



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL    Q    G EPD ITYNT + G C  + +  A+++ + +      P+  T+ 
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+++  CK G++++A  + ++M+++G   ++ T++ LI        ++ A D+  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++ +++ILI+ LCK G    AL  F    ++   PD VTY  LI   C  G+  +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M   G     +  +T+ D
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIID 469



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC    + +A  + E +T    + +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK GR   A  +   M  KG +     Y+ ++   F+  N++ A  ++ 
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E    P+ ++Y I+  GLC+  G ++EA       +D   +P+  ++ +L  G    
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685

Query: 181 G 181
           G
Sbjct: 686 G 686



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 93/180 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G++ D + YN ++      +++     ++ ++    +KP+ +TF  L+ A C+  ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            +M  +M  +G   +  T++ L+ G+ +  ++++A  V   M E   S   V+ ++LI+G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +E+AL      + +   PD +TY   + G C+      A+++ D M++ G  PD
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + + HL  AL+LF ++ + G  PD +TYNT+I   CSL +L +A+ L + +       ++
Sbjct: 312 VGDPHL--ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 369

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+  +ID  CK+ R+++A  +F +M  +G   N +T++ LIDG  K + +  AF++  +
Sbjct: 370 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 429

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN ++Y+ ++   CK+G +++A         N    DVVTY  LI G CKAGR
Sbjct: 430 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 489

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A+++   M   G+ P
Sbjct: 490 TQVALKVLRGMRIKGMRP 507



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +  Q+ DRG  PDI T+NT+I   C+ NRL+EA+ L  ++T   + P+
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 298

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+A CK G    A  +F +M   G   + VTY+ LID       +  A D+ +
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M       + ++Y+ +IDGLCK+  +EEA   F       +  + +T+  LI G CK  
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A +L + M+  G+ P+ +  +++
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSI 445



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 36/230 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   +   G     ITYNTII G C   R++EA ++F+++    +  N+ITF  
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 409

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK+ ++DDA  + ++M+ +G + N +TY+ ++  Y K  ++K A D+ E M  N 
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469

Query: 128 ISPNIVSYSILIDGLCK-----------RGL------------------------MEEAL 152
              ++V+Y  LI+GLCK           RG+                        + +AL
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
             F    +    PD +TY I+ RG C+ G P  EA      M+  G +P+
Sbjct: 530 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 108/195 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++  RG++PD++T+NT++   C  +++  AV + E+++   + P+  TFT L+  F 
Sbjct: 76  VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 135

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +EG ++ A  + ++MLE G  A  VT + LI+GY K   ++ A    ++   +   P+ +
Sbjct: 136 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+  ++GLC+   +  AL      +     PDV TY I++   CK G+  EA  + + M
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255

Query: 194 LRNGIMPDGLLLSTL 208
           +  G +PD    +TL
Sbjct: 256 VDRGCLPDITTFNTL 270



 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  ++AAL++  ++ + G     +T N +I GYC L R+++A+   ++      +P+
Sbjct: 134 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 193

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+   ++  C+   +  A  +   M+++G   +V TY+ +++   K+  ++ A  +  
Sbjct: 194 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 253

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+I +++ LI  LC    +EEAL          + PDV T+ ILI   CK G
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            P  A++L++ M  +G  PD +  +TL D NL S G 
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLID-NLCSLGK 349



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 106/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A+ +  +++ RG+ PD  T+ T++ G+     ++ A+++  ++  +     
Sbjct: 99  LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 158

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  +LI+ +CK GR++DA     + +  G + + +TY+  ++G  ++ ++  A  V +
Sbjct: 159 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 218

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P++ +Y+I+++ LCK G +EEA    +  +D   LPD+ T+  LI   C   
Sbjct: 219 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 278

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA+ L   +   G+ PD
Sbjct: 279 RLEEALDLARQVTVKGVSPD 298



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL    Q    G EPD ITYNT + G C  + +  A+++ + +      P+  T+ 
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+++  CK G++++A  + ++M+++G   ++ T++ LI        ++ A D+  ++   
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++ +++ILI+ LCK G    AL  F    ++   PD VTY  LI   C  G+  +A
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M   G     +  +T+ D
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIID 377



 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC    + +A  + E +T    + +
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 473

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK GR   A  +   M  KG +     Y+ ++   F+  N++ A  ++ 
Sbjct: 474 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 533

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E    P+ ++Y I+  GLC+  G ++EA       +D   +P+  ++ +L  G    
Sbjct: 534 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 593

Query: 181 G 181
           G
Sbjct: 594 G 594



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 93/180 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G++ D + YN ++      +++     ++ ++    +KP+ +TF  L+ A C+  ++  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            +M  +M  +G   +  T++ L+ G+ +  ++++A  V   M E   S   V+ ++LI+G
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +E+AL      + +   PD +TY   + G C+      A+++ D M++ G  PD
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 107/198 (54%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A  LF +L  RGL P ++TYNT+I G C +  LD A++L +++      P+  TFTIL+ 
Sbjct: 349 AFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVR 408

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G +  A  +F +ML +G + +   Y   I G  K  +   AF + EEM      P
Sbjct: 409 GFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPP 468

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           ++++Y++ IDGL K G ++EA       L N L+PD VTY  +I  +  AG   +A  ++
Sbjct: 469 DLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVF 528

Query: 191 DSMLRNGIMPDGLLLSTL 208
             ML  GI P  +  + L
Sbjct: 529 LEMLSKGIFPSVVTYTVL 546



 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 109/213 (51%), Gaps = 3/213 (1%)

Query: 2   LIKECHLDAALKLFG---QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           ++ E  L    K FG   ++  RG  PD+ITYN  I G   L  L EA +L +K+    L
Sbjct: 442 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 501

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            P+ +T+T +I A    G +  A  +F +ML KG   +VVTY+ LI  Y     +K A  
Sbjct: 502 VPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 561

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
            + EM E  + PN+++Y+ LI+GLCK   M++A   F       + P+  TY ILI   C
Sbjct: 562 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENC 621

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
             G   EA++LY  ML   I PD    S L  +
Sbjct: 622 NLGHWQEALRLYKDMLDREIQPDSCTHSALLKH 654



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 113/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  +D A +++  + + G+ P ++TYNT++  +C   ++ EA+QL  ++  +   PN +
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ +L++     G ++ A  +  +ML  G + +  TY  LI GY +   +  A  + EEM
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 P +V+Y+ ++ GLCK G + +A       ++ +L+PD+V+Y  LI GY + G  
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            EA  L+  +   G++P  +  +TL D
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLID 373



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 113/215 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A KL   + ++ L PD+++YNT+I GY  L  + EA  LF +L    L P+
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LID  C+ G +D A  +  +M++ GP  +V T++ L+ G+ K  N+  A ++++
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    + P+  +Y   I G  K G   +A       L     PD++TY + I G  K G
Sbjct: 425 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
              EA +L   ML NG++PD +  +++   +L + 
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 519



 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 112/207 (54%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           ++  LD A +L  ++  RG  P ++TYNTI+ G C   R+ +A +L + +    L P+ +
Sbjct: 272 EKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 331

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  LI  + + G + +A ++F+++  +G   +VVTY+ LIDG  +  ++  A  + +EM
Sbjct: 332 SYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++   P++ +++IL+ G CK G +  A   F   L+  L PD   Y   I G  K G P
Sbjct: 392 IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           ++A  + + ML  G  PD +  +   D
Sbjct: 452 SKAFGMQEEMLARGFPPDLITYNVFID 478



 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 35/233 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  +  AL+L  Q+   G  P+ +TYN ++ G      L++A +L +++  + L+ ++ 
Sbjct: 202 KQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAY 261

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT------------------------ 99
           T+  LI  +C++G++D+A+ +  +ML +G    +VT                        
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVM 321

Query: 100 -----------YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
                      Y+ LI GY +  N+  AF ++ E+    + P++V+Y+ LIDGLC+ G +
Sbjct: 322 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL 381

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + A+      + +   PDV T+ IL+RG+CK G    A +L+D ML  G+ PD
Sbjct: 382 DVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434



 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 110/217 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  +L  A +LF ++ +RGL+PD   Y T I G   L    +A  + E++      P+ I
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ + ID   K G + +A+ +  KML  G   + VTY+ +I  +  + +++ A  V+ EM
Sbjct: 472 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEM 531

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               I P++V+Y++LI     RG ++ A+  F    +  + P+V+TY  LI G CK  + 
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 591

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
            +A + +  M   GI P+    + L + N      QE
Sbjct: 592 DQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQE 628



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A  +F ++  +G+ P ++TY  +I  Y    RL  A+  F ++    + PN IT+ 
Sbjct: 520 HLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 579

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            LI+  CK  +MD A   F++M  KG   N  TY+ LI+      + + A  +Y++M + 
Sbjct: 580 ALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 639

Query: 127 NISPNIVSYSILIDGLCK 144
            I P+  ++S L+  L K
Sbjct: 640 EIQPDSCTHSALLKHLNK 657



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 47/247 (19%)

Query: 7   HLDAALKLFGQLTDR--GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
           H  A    F +  +R  G +   +TY  I+        +  A  + EK+  V+++   + 
Sbjct: 59  HRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVD 118

Query: 65  FTILIDA---FCKEGRMDDATMMFSKMLEKG--P-------------------------- 93
             IL      + K+  ++   ++F KM+ KG  P                          
Sbjct: 119 VLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVY 178

Query: 94  --------KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
                   +  VVTY+ ++D + K   ++ A  +  +M +    PN V+Y++L++GL   
Sbjct: 179 NVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHS 238

Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
           G +E+A       L   L     TY  LIRGYC+ G+  EA +L + ML  G +P     
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVP----- 293

Query: 206 STLADYN 212
            TL  YN
Sbjct: 294 -TLVTYN 299



 Score = 43.1 bits (100), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 41/74 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A K F ++  +G+ P+  TY  +I   C+L    EA++L++ +   +++P+
Sbjct: 585 LCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644

Query: 62  SITFTILIDAFCKE 75
           S T + L+    K+
Sbjct: 645 SCTHSALLKHLNKD 658



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 40/172 (23%)

Query: 90  EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL---CKRG 146
           + G K + +TY+ ++D   ++  M+SA+ V E++    +   +V   IL   L    K+ 
Sbjct: 74  QTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKS 133

Query: 147 LMEEALYAFHCALDNHLLPD------------------------------------VVTY 170
           ++E+ L  F+  +   +LPD                                    VVTY
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 171 AILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
             ++  +CK G+  EA+QL   M + G +P+ +  + L +  L  SG  E  
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVN-GLSHSGELEQA 244


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 110/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +DAA  +   +   G+EP+++TY   I  YC  N +D+A  L+E++    + P+
Sbjct: 219 LCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPD 278

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + L+   CK+GR  +A  +F +M + G   N VTY  LID   K+Q    +  +  
Sbjct: 279 VVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLG 338

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+    +  +++ Y+ L+D LCK G ++EA   F  AL ++  P+ VTY +LI   CKAG
Sbjct: 339 EVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAG 398

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
               A Q+   M    I P+ +  S++
Sbjct: 399 NVDGAEQVLSEMEEKSISPNVVTFSSI 425



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 113/207 (54%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   +  A     ++ +RG++P+++TY T+I G       + A+ ++ ++ C  ++ N
Sbjct: 429 LVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVN 488

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                 L++   K G+++ A  +F +M E+G   + V Y+ LIDG FK+ N+ +AF V +
Sbjct: 489 KFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQ 548

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           E+ E N+ P+ V Y++ I+ LC  G  +EA           L PD VTY  +I    + G
Sbjct: 549 ELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREG 608

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A++L + M R+ I P+ +  STL
Sbjct: 609 KTAKALKLLNGMKRSSIKPNLITYSTL 635



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 106/209 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K    + +L L G++  RG+  D+I Y  ++   C   ++DEA  +F         PN
Sbjct: 324 LAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPN 383

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+T+LIDA CK G +D A  + S+M EK    NVVT+S +I+G  K   +  A D   
Sbjct: 384 GVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMR 443

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E  I PN+V+Y  +IDG  K    E AL  +H  L   +  +      L+ G  K G
Sbjct: 444 EMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNG 503

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  +A  L+  M   G++ D +  +TL D
Sbjct: 504 KIEKAEALFREMNERGVLLDHVNYTTLID 532



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 36/250 (14%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF-- 65
           +D A  L+ ++  +G+ PD++T + ++ G C   R  EA  LF ++  +   PN +T+  
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 66  ---------------------------------TILIDAFCKEGRMDDATMMFSKMLEKG 92
                                            T L+D  CKEG++D+A  MF   L   
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 93  PKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
              N VTY+ LID   K+ N+  A  V  EM E +ISPN+V++S +I+GL KRG + +A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
                  +  + P+VVTY  +I G  K      A+ +Y  ML  G+  +  ++ +L +  
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVN-G 498

Query: 213 LQSSGSQEHC 222
           L+ +G  E  
Sbjct: 499 LKKNGKIEKA 508



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 14/206 (6%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT------FTI 67
           L  ++  RG+  D +T NT++ G C   R+D A  L E    V ++   I       +  
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAE----VMVRGGGIGGLDVVGWNS 179

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D +CK G M+ A  +  +M  +G   +VV Y+ L+ G  ++  + +A D+ + M  + 
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN+V+Y++ I   C+R  +++A   +   +   +LPDVVT + L+ G CK GR +EA 
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299

Query: 188 QLYDSMLRNGIMPDG----LLLSTLA 209
            L+  M + G  P+     +L+ TLA
Sbjct: 300 ALFREMEKIGAAPNHVTYCMLIDTLA 325



 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 100/199 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A+ +  +++ RG+ PD IT+N +I G+     LD A   ++++    + PN  TF  L+ 
Sbjct: 718 AMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLG 777

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
                GR+ ++ M+ ++M ++G + + +TY  L+ GY K  N   A  +Y EM      P
Sbjct: 778 GLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLP 837

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + +Y+ LI    K G+M +A   F+   +  +LP   TY IL+ G+ K    TE  +  
Sbjct: 838 KVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL 897

Query: 191 DSMLRNGIMPDGLLLSTLA 209
             M   G  P    LS+++
Sbjct: 898 KDMKEKGFSPSKGTLSSIS 916



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 106/203 (52%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A  +  ++  +G+  D++ YN+++ G C    +D A  + + +    ++PN +T+T+
Sbjct: 190 METAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTM 249

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
            I  +C+   +DDA  ++ +M+ KG   +VVT S L+ G  K      A+ ++ EM +  
Sbjct: 250 FIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIG 309

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
            +PN V+Y +LID L K     E+L      +   ++ D++ Y  L+   CK G+  EA 
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
            ++   L +   P+G+  + L D
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLID 392



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 37/233 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E     ALKL   +    ++P++ITY+T+I G      +++A  L  +++     P S+
Sbjct: 606 REGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSL 665

Query: 64  TFTILIDAFCKEGRMDD------------------------------------ATMMFSK 87
           T   ++ A C +GR  D                                    A ++  +
Sbjct: 666 THRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEE 724

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
           M  +G   + +T++ LI G+FKS ++ +AF  Y++M  + ISPN+ +++ L+ GL   G 
Sbjct: 725 MSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGR 784

Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           + E+    +      + P  +TY IL+ GY K     EA++LY  M+  G +P
Sbjct: 785 IGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLP 837



 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L++   + + GL  DI  YNT++   C      +A+ + E+++   + P++ITF  L
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I    K G +D+A   + +ML  G   NV T++ L+ G   +  +  +  V  EM +  I
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P+ ++Y IL+ G  K+    EA+  +   +    LP V TY  LI  + K G  ++A +
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860

Query: 189 LYDSMLRNGIMP 200
           L++ M   G++P
Sbjct: 861 LFNEMQNRGVLP 872



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 1/201 (0%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++   GL+PD +TYNT+I       +  +A++L   +    +KPN IT++ LI    + G
Sbjct: 584 EMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAG 643

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
            ++ A  + ++M   G     +T+  ++    + +      +++E M    +  +I  Y+
Sbjct: 644 AVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYN 703

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            L+  LC  G+  +A+          + PD +T+  LI G+ K+G    A   YD ML +
Sbjct: 704 TLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYH 763

Query: 197 GIMPDGLLLSTLADYNLQSSG 217
           GI P+    +TL    L+S+G
Sbjct: 764 GISPNVATFNTLLG-GLESAG 783



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 2/208 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   ++ A  LF ++ +RG+  D + Y T+I G      L  A ++ ++LT   L P+
Sbjct: 499 LKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++ + + I+  C  G+  +A     +M   G K + VTY+ +I    +      A  +  
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLN 618

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  ++I PN+++YS LI GL + G +E+A Y  +    +   P  +T+  +++  C  G
Sbjct: 619 GMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQG 677

Query: 182 RPTE-AMQLYDSMLRNGIMPDGLLLSTL 208
           R ++  +++++ M+  G+  D  + +TL
Sbjct: 678 RRSDLILEIHEWMMNAGLCADITVYNTL 705



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 92/192 (47%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K  HLD A   + Q+   G+ P++ T+NT++ G  S  R+ E+  +  ++    ++P+++
Sbjct: 746 KSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNL 805

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+ IL+  + K+    +A  ++ +M+ KG    V TY+ LI  + K   M  A +++ EM
Sbjct: 806 TYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEM 865

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
               + P   +Y IL+ G  K     E         +    P   T + + R + K G  
Sbjct: 866 QNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMS 925

Query: 184 TEAMQLYDSMLR 195
            EA +L  ++ +
Sbjct: 926 WEARRLLKNLYK 937


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E     A K + ++  R ++PD+ TYN++I G C   ++DEA Q+ + +      P+
Sbjct: 254 FVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPD 313

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+ FCK  R+D+ T +  +M ++G   + VT++ +I GYF++    +A +++ 
Sbjct: 314 VVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFS 373

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M      PNI +YSIL+ GLC    +E+AL  F     + +  D+ TY I+I G C  G
Sbjct: 374 RMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIG 430

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
              +A  L+ S+   G+ PD +  +T+
Sbjct: 431 NVEDAWDLFCSLSFKGLEPDVVTYTTM 457



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 111/200 (55%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL + G++   G EPD++T +++I G+C  NR+  AV L  K+  ++ K + + +  +ID
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIID 182

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            FCK G +++A ++F +M   G +A+ VTY+ L+ G   S     A  +  +M   +I P
Sbjct: 183 GFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVP 242

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N+++++ LI+   + G   EA   +   +   + PDV TY  +I G C  G+  EA Q+ 
Sbjct: 243 NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL 302

Query: 191 DSMLRNGIMPDGLLLSTLAD 210
           D M+  G  PD +  +TL +
Sbjct: 303 DLMVTKGCFPDVVTYNTLIN 322



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 113/195 (57%), Gaps = 5/195 (2%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            +D A ++   +  +G  PD++TYNT+I G+C   R+DE  +L  +++   L  +++TF 
Sbjct: 294 QVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFN 353

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            +I  + + GR D A  +FS+M   G + N+ TYS L+ G   +  ++ A  ++E M ++
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKS 410

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
            +  +I +Y+I+I G+C  G +E+A +   C+L    L PDVVTY  +I G+C+     +
Sbjct: 411 EMELDITTYNIVIHGMCMIGNVEDA-WDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDK 469

Query: 186 AMQLYDSMLRNGIMP 200
           A  LY  M  +G++P
Sbjct: 470 ADFLYRKMQEDGLLP 484



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 106/206 (51%)

Query: 10  AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
            A+ L  ++ +   + D++ YNTII G+C    ++ A+ LF ++    ++ +++T+  L+
Sbjct: 157 GAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLV 216

Query: 70  DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
              C  GR  DA  +   M+ +    NV+T++ LI+ + +      A   YEEM    I 
Sbjct: 217 TGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCID 276

Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
           P++ +Y+ +I GLC  G ++EA       +     PDVVTY  LI G+CK  R  E  +L
Sbjct: 277 PDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKL 336

Query: 190 YDSMLRNGIMPDGLLLSTLADYNLQS 215
              M + G++ D +  +T+     Q+
Sbjct: 337 VREMSQRGLVVDTVTFNTIIQGYFQA 362



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 100/186 (53%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL LFG++   G+  D +TYN+++ G C   R  +A +L   +    + PN ITFT 
Sbjct: 190 VNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTA 249

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI+AF +EG+  +A   + +M+ +    +V TY+ +I G      +  A  + + M    
Sbjct: 250 LINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKG 309

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+Y+ LI+G CK   ++E            L+ D VT+  +I+GY +AGRP  A 
Sbjct: 310 CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ 369

Query: 188 QLYDSM 193
           +++  M
Sbjct: 370 EIFSRM 375



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 105/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           + K  + D  + LF  +   G+  D+ TYN +I   C  +R   A+ +  K+     +P+
Sbjct: 79  IAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + LI+ FC+  R+  A  + SKM E   K +VV Y+ +IDG+ K+  + +A  ++ 
Sbjct: 139 VVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFG 198

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + +  + V+Y+ L+ GLC  G   +A       +   ++P+V+T+  LI  + + G
Sbjct: 199 RMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREG 258

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           +  EA + Y+ M+R  I PD
Sbjct: 259 KFLEAKKFYEEMIRRCIDPD 278



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           +LD A+ LF  +      P I+ ++ ++         D  + LF  +    +  +  T+ 
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+I+  C+  R   A  +  KM++ G + +VVT S LI+G+ +   +  A D+  +M E 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
               ++V Y+ +IDG CK GL+  AL  F     + +  D VTY  L+ G C +GR ++A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
            +L   M+   I+P+ +  + L +
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALIN 252



 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)

Query: 88  MLEKGPKANVVTYSCLIDGYFK----SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +LEKG +      S      F     S N+  A D++  M ++   P+IV +S L+  + 
Sbjct: 21  LLEKGNRVTAPFISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIA 80

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
           K    +  +  FH      +  D+ TY I+I   C+  R   A+ +   M++ G  PD +
Sbjct: 81  KSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140

Query: 204 LLSTLAD 210
            +S+L +
Sbjct: 141 TVSSLIN 147


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           + + HL  AL+LF ++ + G  PD +TYNT+I   CSL +L +A+ L + +       ++
Sbjct: 404 VGDPHL--ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           IT+  +ID  CK+ R+++A  +F +M  +G   N +T++ LIDG  K + +  AF++  +
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN ++Y+ ++   CK+G +++A         N    DVVTY  LI G CKAGR
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581

Query: 183 PTEAMQLYDSMLRNGIMP 200
              A+++   M   G+ P
Sbjct: 582 TQVALKVLRGMRIKGMRP 599



 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   L+ A  +  Q+ DRG  PDI T+NT+I   C+ NRL+EA+ L  ++T   + P+
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             TF ILI+A CK G    A  +F +M   G   + VTY+ LID       +  A D+ +
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M       + ++Y+ +IDGLCK+  +EEA   F       +  + +T+  LI G CK  
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           +  +A +L + M+  G+ P+ +  +++
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSI 537



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 36/230 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  AL L   +   G     ITYNTII G C   R++EA ++F+++    +  N+ITF  
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LID  CK+ ++DDA  + ++M+ +G + N +TY+ ++  Y K  ++K A D+ E M  N 
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 128 ISPNIVSYSILIDGLCK-----------RGL------------------------MEEAL 152
              ++V+Y  LI+GLCK           RG+                        + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPD 201
             F    +    PD +TY I+ RG C+ G P  EA      M+  G +P+
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 108/195 (55%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++ ++  RG++PD++T+NT++   C  +++  AV + E+++   + P+  TFT L+  F 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           +EG ++ A  + ++MLE G  A  VT + LI+GY K   ++ A    ++   +   P+ +
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
           +Y+  ++GLC+   +  AL      +     PDV TY I++   CK G+  EA  + + M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 194 LRNGIMPDGLLLSTL 208
           +  G +PD    +TL
Sbjct: 348 VDRGCLPDITTFNTL 362



 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 1/217 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            ++E  ++AAL++  ++ + G     +T N +I GYC L R+++A+   ++      +P+
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+   ++  C+   +  A  +   M+++G   +V TY+ +++   K+  ++ A  +  
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M +    P+I +++ LI  LC    +EEAL          + PDV T+ ILI   CK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            P  A++L++ M  +G  PD +  +TL D NL S G 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLID-NLCSLGK 441



 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 106/200 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +   +  A+ +  +++ RG+ PD  T+ T++ G+     ++ A+++  ++  +     
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T  +LI+ +CK GR++DA     + +  G + + +TY+  ++G  ++ ++  A  V +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P++ +Y+I+++ LCK G +EEA    +  +D   LPD+ T+  LI   C   
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  EA+ L   +   G+ PD
Sbjct: 371 RLEEALDLARQVTVKGVSPD 390



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 105/204 (51%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
            ++ AL    Q    G EPD ITYNT + G C  + +  A+++ + +      P+  T+ 
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I+++  CK G++++A  + ++M+++G   ++ T++ LI        ++ A D+  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            +SP++ +++ILI+ LCK G    AL  F    ++   PD VTY  LI   C  G+  +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
           + L   M   G     +  +T+ D
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIID 469



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K+  +D A +L  Q+   GL+P+ ITYN+I+  YC    + +A  + E +T    + +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+  LI+  CK GR   A  +   M  KG +     Y+ ++   F+  N++ A  ++ 
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 122 EMCENNISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
           EM E    P+ ++Y I+  GLC+  G ++EA       +D   +P+  ++ +L  G    
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685

Query: 181 G 181
           G
Sbjct: 686 G 686



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 93/180 (51%)

Query: 22  GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
           G++ D + YN ++      +++     ++ ++    +KP+ +TF  L+ A C+  ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 82  TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
            +M  +M  +G   +  T++ L+ G+ +  ++++A  V   M E   S   V+ ++LI+G
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            CK G +E+AL      + +   PD +TY   + G C+      A+++ D M++ G  PD
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320


>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 490

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           + C  D     FG+L   G+ PD+ITY++++  +C + R +EA+ L        L P++I
Sbjct: 111 RACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDLLLHRVSGDL-PDAI 169

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPK--ANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++++++ +FC +GR   A  +   M EKG +   +VV+Y+ +I G+FK   +  A  ++ 
Sbjct: 170 SYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFH 229

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M +    P++V+Y+ +I+ LCK   M++A       + N + PD VTY  LI GY   G
Sbjct: 230 GMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILG 289

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
           +  E  +L   M   G+MP  +  S++ DY
Sbjct: 290 QLKETFRLLKVMRSQGVMPSLVTCSSVMDY 319



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 6/209 (2%)

Query: 11  ALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           AL L   + ++G E  P +++YN +I G+     + +A  LF  +      P+ +T+  +
Sbjct: 187 ALDLLRMMAEKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSV 246

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+A CK   MD A ++   M+    + + VTY+ LI GY     +K  F + + M    +
Sbjct: 247 INALCKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGV 306

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++V+ S ++D LCK G ++EA   F+    N   PD+V Y+I++ GY   G   + + 
Sbjct: 307 MPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMID 366

Query: 189 LYDSMLRNGIMPD----GLLLSTLADYNL 213
           L + M R+G++PD     +L++  A Y +
Sbjct: 367 LCEVMARDGVVPDLPCFNILINAYAKYGM 395



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 104/197 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A  +   +    ++PD +TYN++I GY  L +L E  +L + +    + P+
Sbjct: 250 LCKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPS 309

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T + ++D  CK G++ +A  MF      G K ++V YS ++ GY    ++    D+ E
Sbjct: 310 LVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCE 369

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  + + P++  ++ILI+   K G+M+ A+  F   L   + P+  TY  +I  +CK G
Sbjct: 370 VMARDGVVPDLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMG 429

Query: 182 RPTEAMQLYDSMLRNGI 198
           R  +AM+ +  M+  G+
Sbjct: 430 RMDDAMEKFSEMIDMGV 446



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 36/187 (19%)

Query: 58  LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLI------------- 104
           + P++ T+ ILID   +  R D     F ++L+ G   +V+TYS L+             
Sbjct: 95  IAPDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEAL 154

Query: 105 ------------DGYFKSQNMKS---------AFDVYEEMCENNI--SPNIVSYSILIDG 141
                       D    S  +KS         A D+   M E     SP++VSY+++I G
Sbjct: 155 DLLLHRVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHG 214

Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
             K G + +A + FH  +    +PDVVTY  +I   CKA    +A  +  SM+ N + PD
Sbjct: 215 FFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPD 274

Query: 202 GLLLSTL 208
            +  ++L
Sbjct: 275 AVTYNSL 281



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 70/145 (48%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  A ++F      G +PDI+ Y+ ++ GY     L + + L E +    + P+
Sbjct: 320 LCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPD 379

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
              F ILI+A+ K G MD A + F  ML++G K N  TY  +I  + K   M  A + + 
Sbjct: 380 LPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFS 439

Query: 122 EMCENNISPNIVSYSILIDGLCKRG 146
           EM +  +  +   Y  +++G    G
Sbjct: 440 EMIDMGVPLDTEVYMCMVEGYLNHG 464


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 4/203 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL----K 59
           +E   D + K+  ++ + GL PDI+T+N+ I   C   ++ +A ++F  +   +     +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
           PNSIT+ +++  FCK G ++DA  +F  + E    A++ +Y+  + G  +      A  V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
            ++M +  I P+I SY+IL+DGLCK G++ +A         N + PD VTY  L+ GYC 
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 180 AGRPTEAMQLYDSMLRNGIMPDG 202
            G+   A  L   M+RN  +P+ 
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNA 431



 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 23/213 (10%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L  A  + G +   G+ PD +TY  ++ GYCS+ ++D A  L +++      PN+ T  I
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM---- 123
           L+ +  K GR+ +A  +  KM EKG   + VT + ++DG   S  +  A ++ + M    
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 124 -------------------CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL 164
                               ENN  P++++YS L++GLCK G   EA   F   +   L 
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556

Query: 165 PDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           PD V Y I I  +CK G+ + A ++   M + G
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 91/168 (54%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           PD+ITY+T++ G C   R  EA  LF ++   +L+P+S+ + I I  FCK+G++  A  +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
              M +KG   ++ TY+ LI G      +     + +EM E  ISPNI +Y+  I  LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
              +E+A       +  ++ P+V ++  LI  +CK      A +++++
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 10/223 (4%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           IKE  ++    L+  +   G+ P   T+N +I   C  + +D A +LF+++     KPN 
Sbjct: 123 IKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNE 182

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
            TF IL+  +CK G  D    + + M   G   N V Y+ ++  + +      +  + E+
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHL---LPDVVTYAILIRGYC 178
           M E  + P+IV+++  I  LCK G + +A   F    LD +L    P+ +TY ++++G+C
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302

Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 221
           K G   +A  L++S+  N        L++L  YN+   G   H
Sbjct: 303 KVGLLEDAKTLFESIRENDD------LASLQSYNIWLQGLVRH 339



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 2/195 (1%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLE--PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL 58
           +  K  H+D A   F  +  R  E  P +  YN ++       R++    L++ +    +
Sbjct: 84  IFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI 143

Query: 59  KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
            P + TF +LI A C    +D A  +F +M EKG K N  T+  L+ GY K+       +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203

Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
           +   M    + PN V Y+ ++   C+ G  +++        +  L+PD+VT+   I   C
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263

Query: 179 KAGRPTEAMQLYDSM 193
           K G+  +A +++  M
Sbjct: 264 KEGKVLDASRIFSDM 278



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 58/254 (22%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ A  LF  + +      + +YN  + G     +  EA  + +++T   + P+  ++ I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D  CK G + DA  +   M   G   + VTY CL+ GY     + +A  + +EM  NN
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 128 ISPN-----------------------------------IVSYSILIDGLCKRGLMEEAL 152
             PN                                    V+ +I++DGLC  G +++A+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 153 -----YAFHCA------------------LDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
                   H +                  ++N+ LPD++TY+ L+ G CKAGR  EA  L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546

Query: 190 YDSMLRNGIMPDGL 203
           +  M+   + PD +
Sbjct: 547 FAEMMGEKLQPDSV 560



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 37/230 (16%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
           L K   +  A +L  ++ ++G   D +T N I+ G C    LD+A+++ + +        
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 54  ------------------TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
                              C+   P+ IT++ L++  CK GR  +A  +F++M+ +  + 
Sbjct: 501 GNLGNSYIGLVDDSLIENNCL---PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557

Query: 96  NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
           + V Y+  I  + K   + SAF V ++M +     ++ +Y+ LI GL     ++  ++  
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG----IKNQIFEI 613

Query: 156 HCALD----NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           H  +D      + P++ TY   I+  C+  +  +A  L D M++  I P+
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 7/197 (3%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  + +A ++   +  +G    + TYN++I G    N++ E   L +++    + PN  
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+   I   C+  +++DAT +  +M++K    NV ++  LI+ + K  +    FD+ +E+
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD----FDMAQEV 686

Query: 124 CENNIS---PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
            E  +S        YS++ + L   G + +A       LD         Y  L+   CK 
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746

Query: 181 GRPTEAMQLYDSMLRNG 197
                A  +   M+  G
Sbjct: 747 DELEVASGILHKMIDRG 763


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 125/238 (52%), Gaps = 43/238 (18%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +  A K+  ++   GL PD++TY  +ICG+C +  ++E+ +L EK+    LK + +T+T+
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+ + CK GR+D+A ++  +M   G K +++TYS           ++ A ++YEEMC   
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKR 467

Query: 128 ISPN-----------------------------------IVSYSILIDGLCKRGLMEEAL 152
           I PN                                   I+ Y+I+IDG  K G + EA+
Sbjct: 468 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527

Query: 153 YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            ++   ++  + P +VT+  LI G+CK G+  EA++L D++  +G++P  +  +TL +
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +  A   F  +T   +  +II YN +I GY  L  + EAV+ ++++    + P 
Sbjct: 482 LFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +TF  LI  FCK+G++ +A  +   +   G     VTY+ L++GY +  +M S FD+  
Sbjct: 542 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLH 601

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM    I P  ++Y++++ GLCK G + E++          L PD +TY  +I+ +CKA 
Sbjct: 602 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 661

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
              +A QL++ ML++ + P  +  + L +
Sbjct: 662 DLQKAFQLHNQMLQHSLQPSPVTYNVLIN 690



 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 103/194 (53%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+  L  A+KL   +   GL P  +TY T++ GYC    +     +  ++    +KP  I
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+++   CKEGR+ ++  +   M  +G   + +TY+ +I  + K+ +++ AF ++ +M
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            ++++ P+ V+Y++LI+GLC  G +++A        D  +    V Y  +I+ +C  G  
Sbjct: 674 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 733

Query: 184 TEAMQLYDSMLRNG 197
             A+  +  M+  G
Sbjct: 734 QNALVFFHQMVERG 747



 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 107/199 (53%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  L  +++L   +  RGL PD ITYNT+I  +C  + L +A QL  ++    L+P+
Sbjct: 622 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 681

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            +T+ +LI+  C  G + DA  +   + ++  +   V Y+ +I  +    ++++A   + 
Sbjct: 682 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 741

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M E     +I  YS +I+ LCKR L+ +A + F   L + + PD     +++  + ++G
Sbjct: 742 QMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSG 801

Query: 182 RPTEAMQLYDSMLRNGIMP 200
            P    +++  M++ G++P
Sbjct: 802 DPNSVFEIFAMMIKCGLLP 820



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A+ L  ++   GL+PD++TY        S   ++EA++L+E++   ++ PN
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTY--------SRGAVEEAIELYEEMCSKRIYPN 471

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           S   + +I    ++G + +A M F  + +      ++ Y+ +IDGY K  N+  A   Y+
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++ E  ISP IV+++ LI G CK+G + EA+        + L+P  VTY  L+ GYC+ G
Sbjct: 532 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 591

Query: 182 RPTEAMQLYDSMLRNGIMP 200
                  +   M    I P
Sbjct: 592 DMHSMFDMLHEMEAKAIKP 610



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           H D    ++ ++   G+  +  T   +I G C  +RL +AV    +    +  P+ ++F 
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+  FCK G +D A   F  M++ G   +V +Y+ L+ G   + +M+ A +   +M  +
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENH 334

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
            + P+IV+Y+IL +G    GL+  A       L N L PD+VTY ILI G+C+ G   E+
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 187 MQLYDSMLRNG----IMPDGLLLSTL 208
            +L + ML  G    I+   +LLS+L
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSL 420



 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 104/205 (50%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  L  A+    +       P ++++N ++ G+C +  +D A   F  +    L P+
Sbjct: 245 LCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPD 304

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             ++ IL+   C  G M++A    + M   G + ++VTY+ L +G+     +  A+ V +
Sbjct: 305 VYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQ 364

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M  N ++P++V+Y+ILI G C+ G +EE+       L   L   +VTY +L+   CK+G
Sbjct: 365 RMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSG 424

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLS 206
           R  EA+ L   M   G+ PD L  S
Sbjct: 425 RIDEAVILLHEMEVIGLKPDLLTYS 449



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 101/198 (51%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  + +   +  ++  + ++P  ITY  ++ G C   RL E+VQL + +    L P+ I
Sbjct: 589 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 648

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  +I +FCK   +  A  + ++ML+   + + VTY+ LI+G     N+K A  +   +
Sbjct: 649 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 708

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            + +I    V+Y+ +I   C +G ++ AL  FH  ++      +  Y+ +I   CK    
Sbjct: 709 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 768

Query: 184 TEAMQLYDSMLRNGIMPD 201
           T+A   +  ML +GI PD
Sbjct: 769 TDAKFFFCMMLTHGIPPD 786



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 108/203 (53%), Gaps = 8/203 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ AL+    + + G+EPDI+TYN +  G+  L  +  A ++ +++    L P+ +T+TI
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTI 380

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           LI   C+ G ++++  +  KML +G K ++VTY+ L+    KS  +  A  +  EM    
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++++YS        RG +EEA+  +       + P+    + +I G  + G  +EA 
Sbjct: 441 LKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 492

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
             +DS+ ++ +  + +L + + D
Sbjct: 493 MYFDSVTKSDVAEEIILYNIMID 515



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 9/194 (4%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL +  ++    L+  I TYN+++    +L   D    ++ ++    +  N  T  ILID
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIMWDVYNEIKASGVPQNEYTNPILID 243

Query: 71  AFCKEGRMDDATMMFSKM--LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
             C++ R+ DA     +    E GP  +VV+++ L+ G+ K  ++  A   +  M +  +
Sbjct: 244 GLCRQSRLQDAVTFLRETGGEEFGP--SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGL 301

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTEAM 187
            P++ SY+IL+ GLC  G MEEAL  F   ++NH + PD+VTY IL  G+   G  + A 
Sbjct: 302 LPDVYSYNILLHGLCVAGSMEEAL-EFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 188 QLYDSMLRNGIMPD 201
           ++   ML NG+ PD
Sbjct: 361 KVVQRMLLNGLNPD 374



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 3/190 (1%)

Query: 21  RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
           R  + + + ++ + C Y     + +A+ +  K+  + L+ +  T+  L+        M D
Sbjct: 162 RDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD 221

Query: 81  ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILID 140
              +++++   G   N  T   LIDG  +   ++ A     E       P++VS++ L+ 
Sbjct: 222 ---VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMS 278

Query: 141 GLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
           G CK G ++ A   F   +   LLPDV +Y IL+ G C AG   EA++  + M  +G+ P
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEP 338

Query: 201 DGLLLSTLAD 210
           D +  + LA+
Sbjct: 339 DIVTYNILAN 348


>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 4/209 (1%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIIC--GYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +E +L+ A+K++  +     +PD+ TYN +I   G C ++R  EA +LF+ L      P+
Sbjct: 338 RESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSR--EAGRLFKDLESKGFLPD 395

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           ++T+  L+ AF +EG +D    +   M++ G   + +TY+ +I  Y K      AF +Y 
Sbjct: 396 AVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYS 455

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M  +  SP+ V+Y++LID L K  +++EA       L+  + P + T++ LI GY KAG
Sbjct: 456 DMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAG 515

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           +  EA + +D MLR+GI PD L  S + D
Sbjct: 516 KRVEAEETFDCMLRSGIKPDHLAYSVMLD 544



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 99/198 (50%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  L  +G  PD +TYN+++  +     +D+  ++ E +  +    + +T+  +I 
Sbjct: 380 AGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIH 439

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            + K G+ D A  ++S M   G   + VTY+ LID   K+  +K A +V  EM    + P
Sbjct: 440 MYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKP 499

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
            + ++S LI G  K G   EA   F C L + + PD + Y++++    +     +AM+LY
Sbjct: 500 TLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLY 559

Query: 191 DSMLRNGIMPDGLLLSTL 208
             M+ +   PD  L   +
Sbjct: 560 QEMVLHSFKPDHALYEVM 577



 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 95/190 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E ++D   ++   +   G   D +TYNTII  Y    + D A QL+  +      P+++
Sbjct: 408 REGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAV 467

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+T+LID+  K   + +A  + S+ML    K  + T+S LI GY K+     A + ++ M
Sbjct: 468 TYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCM 527

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             + I P+ ++YS+++D L +     +A+  +   + +   PD   Y +++R   K  R 
Sbjct: 528 LRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENRE 587

Query: 184 TEAMQLYDSM 193
            +  ++   M
Sbjct: 588 EDVHKVVKDM 597



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 8/193 (4%)

Query: 13   KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
            +++  + + GL+PD  TYNT+I  YC   R +E + L  ++  V L+P   T+  LI AF
Sbjct: 975  QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF 1034

Query: 73   CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
             K   ++ A  +F  +L K  K +   Y  ++  +  S N   A  +   M E  + P I
Sbjct: 1035 GKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTI 1094

Query: 133  VSYSILIDGLCKRGLMEEALYAFHCALDN---HLLP-DVVTYAILIRGYCKAGRPTEAMQ 188
             +  +L+      G  EEA       LDN     LP   + Y+ +I  Y K G    A+Q
Sbjct: 1095 ATMHLLMVSYSGSGQPEEA----EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQ 1150

Query: 189  LYDSMLRNGIMPD 201
                M ++G+ PD
Sbjct: 1151 KLMEMKKDGLEPD 1163



 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 27  IITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRM--DDATMM 84
           +  YN ++  Y    R  +  +L + +     +P+ ++F  LI+A  K G M  + A  +
Sbjct: 254 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 313

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
            +++   G + +++TY+ LI    +  N++ A  VY +M  +   P++ +Y+ +I    +
Sbjct: 314 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGR 373

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
            G+  EA   F        LPD VTY  L+  + + G   +  ++ + M++ G   D + 
Sbjct: 374 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMT 433

Query: 205 LSTL 208
            +T+
Sbjct: 434 YNTI 437



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 91/193 (47%)

Query: 23   LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
             +PD+  +N+++  Y  +    +  Q+++ +    LKP+  T+  LI  +C++ R ++  
Sbjct: 950  FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 1009

Query: 83   MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
             +  +M   G +  + TY  LI  + K Q ++ A +++E +       +   Y I++   
Sbjct: 1010 SLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMF 1069

Query: 143  CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
               G   +A        +  + P + T  +L+  Y  +G+P EA ++ D++   G+    
Sbjct: 1070 RNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLST 1129

Query: 203  LLLSTLADYNLQS 215
            L  S++ D  L++
Sbjct: 1130 LPYSSVIDAYLKN 1142



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 1/197 (0%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            +  L L  ++   GLEP + TY ++I  +  L  +++A +LFE L   + K +   + I+
Sbjct: 1006 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1065

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +  F   G    A  +   M E G +  + T   L+  Y  S   + A  V + +    +
Sbjct: 1066 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1125

Query: 129  SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
              + + YS +ID   K G    A+        + L PD   +   +R    +   +EA+ 
Sbjct: 1126 PLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIV 1185

Query: 189  LYDSMLRNGI-MPDGLL 204
            L  ++   G  +P  LL
Sbjct: 1186 LLKALRDTGFDLPIRLL 1202



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 81/192 (42%)

Query: 9    DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
            + A  +F  +   G  P + + N ++       RLDE   + ++L  +  K +  + T++
Sbjct: 831  ERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLM 890

Query: 69   IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
            +DAF   G + +   ++  M   G    +  Y  +I    K + ++    +  EM     
Sbjct: 891  LDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXF 950

Query: 129  SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
             P++  ++ ++      G  ++    +    +  L PD  TY  LI  YC+  RP E + 
Sbjct: 951  KPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLS 1010

Query: 189  LYDSMLRNGIMP 200
            L   M R G+ P
Sbjct: 1011 LMHEMRRVGLEP 1022



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 15/193 (7%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +IKE     A ++  ++ +  ++P + T++ +ICGY    +  EA + F+ +    +KP+
Sbjct: 481 MIKE-----AAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPD 535

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY- 120
            + +++++D   +      A  ++ +M+    K +   Y  ++    K    +    V  
Sbjct: 536 HLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVK 595

Query: 121 --EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
             EE+C  N   + V  SIL+ G C     + A      A+      D      ++  Y 
Sbjct: 596 DMEELCGMN---SQVICSILVKGEC----FDHAANMLRLAISQGCELDRENLLSILGSYG 648

Query: 179 KAGRPTEAMQLYD 191
            +GR  EA +L D
Sbjct: 649 SSGRHLEARELLD 661



 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 37/237 (15%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRL-DEAVQLFEKLTCVQLK 59
           ML K   L  AL+ +G+  D GL     T    +   C  N L  EA Q+F  +    ++
Sbjct: 681 MLCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVE 740

Query: 60  PNSITFTILIDAFCKEGRMDDATMMFSKMLEKG----------------------PKANV 97
           P+   +  ++  +CK G  + A  +  +  EKG                       KA  
Sbjct: 741 PSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAES 800

Query: 98  V--------------TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
           +               ++ LI  Y  S   + A  ++  M  +  SP + S + L+  L 
Sbjct: 801 LVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALI 860

Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
             G ++E         D        +  +++  +  AG   E  ++Y  M   G  P
Sbjct: 861 VDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFP 917


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 1/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFTI 67
           + AL+L G ++  G EPDI+TYNT+I G+C  N L++A ++F+ +    +  P+ +T+T 
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +CK G+M +A+ +   ML  G     VT++ L+DGY K+  M +A ++  +M    
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+++ LIDG C+ G + +    +       + P+  TY+ILI   C   R  +A 
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +    I+P   + + + D
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVID 425



 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K   L+ A ++F  +    +  PD++TY ++I GYC   ++ EA  L + +  + + P +
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TF +L+D + K G M  A  +  KM+  G   +VVT++ LIDGY +   +   F ++EE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN  +YSILI+ LC    + +A           ++P    Y  +I G+CKAG+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA  + + M +    PD +  + L
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTIL 458



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 15/217 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ A+KLF +        D  T+N +I G C + + ++A++L   ++    +P+
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDV 119
            +T+  LI  FCK   ++ A+ MF K ++ G     +VVTY+ +I GY K+  M+ A  +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAIL 173
            ++M    I P  V++++L+DG  K G M  A      + +F C       PDVVT+  L
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC------FPDVVTFTSL 353

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I GYC+ G+ ++  +L++ M   G+ P+    S L +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 103/187 (55%), Gaps = 1/187 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++ G++   G  PD++T+ ++I GYC + ++ +  +L+E++    + PN+ T++ILI+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C E R+  A  +  ++  K        Y+ +IDG+ K+  +  A  + EEM +    P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++++ILI G C +G M EA+  FH  +     PD +T + L+    KAG   EA  L 
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL- 509

Query: 191 DSMLRNG 197
           + + R G
Sbjct: 510 NQIARKG 516



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 1/184 (0%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +  N+++     L+R+++A++LF++    Q   ++ TF ILI   C  G+ + A  +   
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNIVSYSILIDGLCKRG 146
           M   G + ++VTY+ LI G+ KS  +  A ++++++   ++ SP++V+Y+ +I G CK G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M EA       L   + P  VT+ +L+ GY KAG    A ++   M+  G  PD +  +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351

Query: 207 TLAD 210
           +L D
Sbjct: 352 SLID 355



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 34/216 (15%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG------------ 76
           TYN +    C     D A Q+FE +    + PN+     L+ +F ++G            
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164

Query: 77  ---------------------RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
                                R++DA  +F + L      +  T++ LI G       + 
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILI 174
           A ++   M      P+IV+Y+ LI G CK   + +A   F       +  PDVVTY  +I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            GYCKAG+  EA  L D MLR GI P  +  + L D
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 3/132 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L  A +L GQL  + + P    YN +I G+C   +++EA  + E++   + KP+
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---D 118
            ITFTILI   C +GRM +A  +F KM+  G   + +T S L+    K+   K A+    
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511

Query: 119 VYEEMCENNISP 130
           +  +   NN+ P
Sbjct: 512 IARKGQSNNVVP 523


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 30/234 (12%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLT------------ 54
            + AA ++  ++  +G  PD +++ TII   C L+RLDEA  +  ++T            
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHA 236

Query: 55  -CVQ-----------------LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKAN 96
            C Q                 L+P+++ +T ++ AFCK   +  A  + ++M+ +G   N
Sbjct: 237 LCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPN 296

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           V T++ L+ G+F    +  A  ++  M     +P+ +SY++LI GLC  G ++ AL+ F 
Sbjct: 297 VQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFS 356

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           C   +  LPDV TY+ LI G+ KAG    AM +++ M   G  P+ ++ + + D
Sbjct: 357 CMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVD 410



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 93/190 (48%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K   LD A+ ++  +T+ G +P+++ Y  ++   C     D+A  L +K++     PN++
Sbjct: 379 KAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTL 438

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           TF  LI + C  GR   A  +F  M   G   N  TY+ L+ G F+  N + A  +  EM
Sbjct: 439 TFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEM 498

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +    ++VSY+  I GLC+  +++EA+      +   + PD  T+  +I  YCK G  
Sbjct: 499 LNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNV 558

Query: 184 TEAMQLYDSM 193
             A  +   M
Sbjct: 559 RAAAWMLGRM 568



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 98/192 (51%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++  RGL PD + Y +I+  +C    L  A  +  ++      PN  TFT+L+  F  +G
Sbjct: 252 EMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDG 311

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++ DA  M++ M+ +G   + ++Y+ LI G     ++K A  V+  M +++  P++ +YS
Sbjct: 312 KVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYS 371

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            LIDG  K G ++ A+  ++   +    P+VV Y  ++   CK     +A  L D M   
Sbjct: 372 TLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLE 431

Query: 197 GIMPDGLLLSTL 208
              P+ L  +TL
Sbjct: 432 NCPPNTLTFNTL 443



 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           AL ++  +   G  P  I+YN +I G C +  L  A+ +F  +      P+  T++ LID
Sbjct: 316 ALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLID 375

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
            F K G +D A  +++ M   G K NVV Y+ ++D   K      A ++ ++M   N  P
Sbjct: 376 GFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPP 435

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           N ++++ LI  LC  G    AL  FH        P+  TY  L+ G  + G   +A+++ 
Sbjct: 436 NTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRML 495

Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSG 217
             ML +G         +L  YN   SG
Sbjct: 496 TEMLNHGFE------LSLVSYNTTISG 516



 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 3/206 (1%)

Query: 6   CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           CH   L  AL +F  +      PD+ TY+T+I G+     LD A+ ++  +T    KPN 
Sbjct: 343 CHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           + +T ++D  CK+   D A  +  KM  +    N +T++ LI           A +V+  
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHG 462

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M      PN  +Y+ L+ GL + G  E+AL      L++     +V+Y   I G C+   
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EAM L   M+  GI PD    + +
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAI 548



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%)

Query: 1   MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
           +L K+   D A  L  +++     P+ +T+NT+I   C L R   A+ +F  +      P
Sbjct: 411 VLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPP 470

Query: 61  NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
           N  T+  L+    +EG  +DA  M ++ML  G + ++V+Y+  I G  + + +K A  + 
Sbjct: 471 NDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILL 530

Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
             M    I P+  +++ +I   CK G +  A +        +   ++V Y  L+ G C  
Sbjct: 531 GRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQ 590

Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
            +  +AM     ML  GI P+
Sbjct: 591 HKLDDAMVYLLKMLYEGICPN 611



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 74/141 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L +E + + AL++  ++ + G E  +++YNT I G C +  + EA+ L  ++    ++P+
Sbjct: 482 LFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPD 541

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
           + TF  +I A+CKEG +  A  M  +M       N+V Y+ L+ G      +  A     
Sbjct: 542 AFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLL 601

Query: 122 EMCENNISPNIVSYSILIDGL 142
           +M    I PN  ++++L+ G+
Sbjct: 602 KMLYEGICPNEATWNVLVRGI 622



 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 7/195 (3%)

Query: 9   DAALKLFGQLT-DRG-LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           D ALK F +   D G   P +  YN ++      N +   V +++ +    ++PN  T+ 
Sbjct: 107 DRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYN 166

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           +LI A C+  R+  A  M  +M  KG + + V+++ +I    K   +  A  +  EM   
Sbjct: 167 LLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM--- 223

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
             +P   SY+ ++  LC +  M E        +   L PD V Y  ++  +CKA     A
Sbjct: 224 --TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMA 281

Query: 187 MQLYDSMLRNGIMPD 201
             +   M+  G +P+
Sbjct: 282 CAILARMVTEGCVPN 296



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 5/107 (4%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           +IKE     A+ L G++  +G++PD  T+N II  YC    +  A  +  ++  V    N
Sbjct: 522 MIKE-----AMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRN 576

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
            + +T L+   C + ++DDA +   KML +G   N  T++ L+ G F
Sbjct: 577 IVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIF 623


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 110/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L +FG+L   GL PD+ +YN +I G+     +D+A  LF K+    + PN +T++ L
Sbjct: 135 DLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSL 194

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  CK   MD A  +  +M+  G + N +TY+CLI GY  S   K +  V++EM  + +
Sbjct: 195 INGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLL 254

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ + +  +  LCK G ++EA   F   +     PDV++Y  L+ GY  AG       
Sbjct: 255 VPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDN 314

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L++ M+  G++PD  + +TL
Sbjct: 315 LFNVMVCEGVVPDRHVFNTL 334



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  +   G+ PD   +NT+I  Y  L  +D+++ +FE +T   + P+ ITF+ +I AFC
Sbjct: 315 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 374

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   YSCLI G    +++  A ++  +M    I P  +
Sbjct: 375 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 434

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            + + +I+ LCK G + E        +     P+++T+  L+ GYC  G   EA+ L DS
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 494

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   G+ PD    +TL D
Sbjct: 495 MESVGVEPDIYTYNTLVD 512



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P++IT+N+++ GYC +  + EAV L + +  V ++P+
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 503

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+D +CK GR+DDA  +F  ML K      V+Y+ ++ G F+++    A +++ 
Sbjct: 504 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 563

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+ ++ +I +Y+ ++ GLC+    +EA          ++  D++T+ I+IR   K G
Sbjct: 564 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 623

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  EA +L+ ++   G++P
Sbjct: 624 RRQEAKELFAAISTYGLVP 642



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+   G+ P+ +TYN +I GY +     E+V++F++++   L P+
Sbjct: 198 LCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 257

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                  + A CK GR+ +A  +F  M+ KGPK +V++Y  L+ GY  +  +    +++ 
Sbjct: 258 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 317

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+   ++ LI+   + G+M+++L  F       + PD++T++ +I  +C+ G
Sbjct: 318 VMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 377

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+  G+ PD  + S L
Sbjct: 378 RLDDAMEKFNHMIDTGVPPDTAVYSCL 404



 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 94/177 (53%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I TYN +I  Y    R D  + +F +L    L P+  ++  LID F KEG +D A  +
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F KM E+G   NVVTYS LI+G  K++ M  A  V  +M    + PN ++Y+ LI G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G+ +E++  F     + L+PDV      +   CK GR  EA  ++DSM+  G  PD
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 36/227 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT--- 64
           +D +L +F  +T +G+ PDIIT++T+I  +C L RLD+A++ F  +    + P++     
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 403

Query: 65  ---------------------------------FTILIDAFCKEGRMDDATMMFSKMLEK 91
                                            FT +I+  CKEGR+ +   +   ++  
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 463

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G + N++T++ L+DGY    NMK A  + + M    + P+I +Y+ L+DG CK G +++A
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           L  F   L   +    V+Y I++ G  +A R   A +++  M+ +G+
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 570



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 107/202 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A+ L   +   G+EPDI TYNT++ GYC   R+D+A+ LF  +   ++   S+++ 
Sbjct: 484 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 543

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY+ ++ G  ++     A  + E++   
Sbjct: 544 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM 603

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P ++TY ++I    K     +A
Sbjct: 604 NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDA 663

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ SM ++   PD  +L+ +
Sbjct: 664 DNLFSSMEKSSCTPDSRILNEI 685



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 3/159 (1%)

Query: 46  AVQLFEKL---TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           AV+LF+++    C +  P   T+ ILI+ + +  R D    +F ++L  G   +V +Y+ 
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LIDG+ K   +  A D++ +M E  I PN+V+YS LI+GLCK   M++A       +   
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + P+ +TY  LI GY  +G   E+++++  M  + ++PD
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 257



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 59/107 (55%)

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           + TY+ LI+ Y +++       V+  +    + P++ SY+ LIDG  K G +++A   F+
Sbjct: 118 IYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFY 177

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
              +  ++P+VVTY+ LI G CK     +A ++   M+  G+ P+ +
Sbjct: 178 KMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM 224



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P I +Y+ILI+   +    +  L  F   L   L PDV +Y  LI G+ K G   +A  
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+  M   GIMP+ +  S+L
Sbjct: 175 LFYKMEEQGIMPNVVTYSSL 194



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  ++  GL P I+TY  +I         ++A  LF  +      P+S     +I 
Sbjct: 628 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 687

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
               +G +  A    SK+ +KG      T S LI  Y  S N K
Sbjct: 688 MLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI--YLFSVNGK 729


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 1/203 (0%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFTI 67
           + AL+L G ++  G EPDI+TYNT+I G+C  N L++A ++F+ +    +  P+ +T+T 
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           +I  +CK G+M +A+ +   ML  G     VT++ L+DGY K+  M +A ++  +M    
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++V+++ LIDG C+ G + +    +       + P+  TY+ILI   C   R  +A 
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402

Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
           +L   +    I+P   + + + D
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVID 425



 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 4   KECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           K   L+ A ++F  +    +  PD++TY ++I GYC   ++ EA  L + +  + + P +
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
           +TF +L+D + K G M  A  +  KM+  G   +VVT++ LIDGY +   +   F ++EE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372

Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
           M    + PN  +YSILI+ LC    + +A           ++P    Y  +I G+CKAG+
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432

Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
             EA  + + M +    PD +  + L
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTIL 458



 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 15/217 (6%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L+K   ++ A+KLF +        D  T+N +I G C + + ++A++L   ++    +P+
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDV 119
            +T+  LI  FCK   ++ A+ MF K ++ G     +VVTY+ +I GY K+  M+ A  +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299

Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAIL 173
            ++M    I P  V++++L+DG  K G M  A      + +F C       PDVVT+  L
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC------FPDVVTFTSL 353

Query: 174 IRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
           I GYC+ G+ ++  +L++ M   G+ P+    S L +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 103/187 (55%), Gaps = 1/187 (0%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A ++ G++   G  PD++T+ ++I GYC + ++ +  +L+E++    + PN+ T++ILI+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
           A C E R+  A  +  ++  K        Y+ +IDG+ K+  +  A  + EEM +    P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450

Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
           + ++++ILI G C +G M EA+  FH  +     PD +T + L+    KAG   EA  L 
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL- 509

Query: 191 DSMLRNG 197
           + + R G
Sbjct: 510 NQIARKG 516



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 1/184 (0%)

Query: 28  ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
           +  N+++     L+R+++A++LF++    Q   ++ TF ILI   C  G+ + A  +   
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231

Query: 88  MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNIVSYSILIDGLCKRG 146
           M   G + ++VTY+ LI G+ KS  +  A ++++++   ++ SP++V+Y+ +I G CK G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291

Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
            M EA       L   + P  VT+ +L+ GY KAG    A ++   M+  G  PD +  +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351

Query: 207 TLAD 210
           +L D
Sbjct: 352 SLID 355



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 34/216 (15%)

Query: 29  TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG------------ 76
           TYN +    C     D A Q+FE +    + PN+     L+ +F ++G            
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164

Query: 77  ---------------------RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKS 115
                                R++DA  +F + L      +  T++ LI G       + 
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224

Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILI 174
           A ++   M      P+IV+Y+ LI G CK   + +A   F       +  PDVVTY  +I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284

Query: 175 RGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            GYCKAG+  EA  L D MLR GI P  +  + L D
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 3/132 (2%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L  E  L  A +L GQL  + + P    YN +I G+C   +++EA  + E++   + KP+
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---D 118
            ITFTILI   C +GRM +A  +F KM+  G   + +T S L+    K+   K A+    
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511

Query: 119 VYEEMCENNISP 130
           +  +   NN+ P
Sbjct: 512 IARKGQSNNVVP 523


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 111/201 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
            IK   L+ A ++  ++  RG  PD++TYN +I  +CS  +LD A+++FE+L     +P 
Sbjct: 148 FIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPT 207

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT+TILI+A   +G +D A  +  +ML KG + + +TY+ +I G  K   +  AF++  
Sbjct: 208 VITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR 267

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            +      P+I++Y+IL+  L  RG   E        +     P+VVT++ILI   C+ G
Sbjct: 268 SLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG 327

Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
           +  EA+ L  SM   G+ PD 
Sbjct: 328 KVEEAVNLLRSMKEKGLKPDA 348



 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 1/212 (0%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           +D A+KL  ++  +GLEPD +TYN II G C    +D+A +L   L+    KP+ IT+ I
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+      G+  +   + S+M+  G K NVVT+S LI    +   ++ A ++   M E  
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P+   Y  LI G C+ G ++ A       + +  LPD+V Y  ++ G C+ G+  +A+
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 219
           ++++ +   G  P+    +TL    L SSG +
Sbjct: 404 EVFEKLDEVGCPPNVSSYNTLFSA-LWSSGDR 434



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 108/205 (52%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           KE  +D A +L   L+ RG +PDIITYN ++    S  +  E  +L  ++  +  KPN +
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T +ILI   C++G++++A  +   M EKG K +   Y  LI G+ +   +  A +  E M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
             +   P+IV+Y+ ++ GLC+ G  ++AL  F    +    P+V +Y  L      +G  
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434

Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
             A+++   +L  GI PD +  ++L
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNSL 459



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  ++ A+ L   + ++GL+PD   Y+ +I G+C   RLD A +  E +      P+
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            + +  ++   C+ G+ D A  +F K+ E G   NV +Y+ L    + S +   A ++  
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           ++    I P+ ++Y+ LI  LC+ G+++EA+            P+VV+Y I++ G CK  
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502

Query: 182 RPTEAMQLYDSMLRNGIMPD 201
           R  +A+++  +M   G  P+
Sbjct: 503 RANDAIEVLAAMTEKGCQPN 522



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 103/192 (53%)

Query: 17  QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
           ++ +R  +PD+  YN +I G+   N+L+ A ++ +++      P+ +T+ I+I +FC  G
Sbjct: 128 EILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187

Query: 77  RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
           ++D A  +F ++L+   +  V+TY+ LI+       +  A  + +EM    + P+ ++Y+
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
            +I G+CK  ++++A             PD++TY IL+R     G+ +E  +L   M+  
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 197 GIMPDGLLLSTL 208
           G  P+ +  S L
Sbjct: 308 GCKPNVVTHSIL 319



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 95/190 (50%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           +E  LD A +    +   G  PDI+ YNTI+ G C   + D+A+++FEKL  V   PN  
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           ++  L  A    G    A  M  K+L +G   + +TY+ LI    +   +  A ++  +M
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
                 PN+VSY+I++ GLCK     +A+       +    P+  TY +LI G   +G  
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLR 539

Query: 184 TEAMQLYDSM 193
            EAM+L +S+
Sbjct: 540 AEAMELANSL 549



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 5/206 (2%)

Query: 18  LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
           + D+G  PD+I    +I G+ +   + +A ++ E L     KP+   +  LI  F K  +
Sbjct: 95  MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQ 153

Query: 78  MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
           +++A  +  +M  +G   +VVTY+ +I  +     +  A +++EE+ ++N  P +++Y+I
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
           LI+     G ++ A+      L   L PD +TY  +IRG CK     +A +L  S+   G
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 198 IMPD----GLLLSTLADYNLQSSGSQ 219
             PD     +LL TL      S G +
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEK 299



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 95/189 (50%)

Query: 13  KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
           KL  ++   G +P+++T++ +I   C   +++EAV L   +    LKP++  +  LI  F
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGF 358

Query: 73  CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
           C+EGR+D AT     M+  G   ++V Y+ ++ G  ++     A +V+E++ E    PN+
Sbjct: 359 CREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNV 418

Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            SY+ L   L   G    AL      L+  + PD +TY  LI   C+ G   EA++L   
Sbjct: 419 SSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVD 478

Query: 193 MLRNGIMPD 201
           M      P+
Sbjct: 479 MQSGRYRPN 487



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L++  C+ G+ +++      M++KG   +V+  + LI G+F S+N+  A  V E + E  
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME-ILERY 133

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
             P++ +Y+ LI G  K   +E A            LPDVVTY I+I  +C  G+   A+
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
           ++++ +L++   P  +  + L +  +   G
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGG 223



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 44/80 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L ++  +D A++L   +      P++++YN I+ G C +NR ++A+++   +T    +PN
Sbjct: 463 LCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522

Query: 62  SITFTILIDAFCKEGRMDDA 81
             T+ +LI+     G   +A
Sbjct: 523 ETTYILLIEGIGFSGLRAEA 542


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 113/194 (58%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           L+ AL L+ ++   G+ PD++T+ +I+ G C   +L E   L  ++  + +  N++++TI
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+DA  K G++ +A M  + M+ +G   +V+  + LIDG FKS  +K A  ++  + + N
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + PN ++YS LIDG CK G +  A  A H   +   +P+V+TY+ LI GY K G   +A 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 188 QLYDSMLRNGIMPD 201
           ++   M+    MP+
Sbjct: 185 KVLRKMVHKNAMPN 198



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 35/232 (15%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K+ +  +AL+L+ ++  R L P+ IT N +I G C   R++ A+ + +++  + L P S 
Sbjct: 350 KKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTST 409

Query: 64  TF-----------------------------------TILIDAFCKEGRMDDATMMFSKM 88
           T+                                    ILI   CK G    AT +   M
Sbjct: 410 TYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDM 469

Query: 89  LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
            E+G  A+  TY+ LI GY  S ++K AF  Y  M    +SP+I +Y++L+ GL K GL+
Sbjct: 470 EERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 529

Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
            EA           L+P+  TY  L+ G+CK     E +++Y  M+  G +P
Sbjct: 530 HEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIP 581



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 102/215 (47%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +  AL     +  RG   D+I    +I G     ++ EA  LF  L  + L PN
Sbjct: 69  LFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPN 128

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
            IT++ LID  CK G ++ A     +M EK    NV+TYS LI+GY K   +  AF V  
Sbjct: 129 YITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLR 188

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           +M   N  PNI +Y+IL+DG  K G  + AL  +       L  +V      +    ++G
Sbjct: 189 KMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSG 248

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
           R  EA +L   M   G+ PD +  + L D  L+S 
Sbjct: 249 RMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSG 283



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 118/222 (53%), Gaps = 4/222 (1%)

Query: 3   IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
           +K+  L  A K+  ++  +   P+I TY  ++ G       D A+ L+ K+    LK N 
Sbjct: 175 VKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNV 234

Query: 63  ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
                 ++   + GRM++A  + +KM   G K ++V Y+ L+DG+ KS  + SA ++ +E
Sbjct: 235 FILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQE 294

Query: 123 MCENNISPNIVSYSILIDGLCKRGLME-EALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           M   N+  +IV++++LI+ L K G  + E++Y+     +  L PD+ TY  ++ G  K G
Sbjct: 295 MTSKNVVFDIVTFNVLINCLFKLGKSDTESIYS--AMREMGLSPDLATYNTMLNGNFKKG 352

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
             T A++L++ M    ++P+ +  + + +  L  +G  E+ I
Sbjct: 353 NWTSALELWNEMKSRKLIPNAITCNIMIN-GLCEAGRMENAI 393



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 4/204 (1%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           ++  + + GL PD+ TYNT++ G         A++L+ ++   +L PN+IT  I+I+  C
Sbjct: 325 IYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLC 384

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GRM++A  +  +M+  G      TY  L++   KS+   +    +E +    +  +  
Sbjct: 385 EAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKD 444

Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
            Y+ILI  LCK G+  +A        +  ++ D  TY  LI GYC +     A   Y +M
Sbjct: 445 VYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTM 504

Query: 194 LRNGIMPD----GLLLSTLADYNL 213
           L   + PD     LLL  L+   L
Sbjct: 505 LSERVSPDIETYNLLLGGLSKAGL 528



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
           ++ A     ++ ++   P++ITY+++I GY     L +A ++  K+      PN  T+ I
Sbjct: 145 INGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAI 204

Query: 68  LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
           L+D   K G  D A  ++SKM + G K NV      ++   +S  M+ A ++  +M    
Sbjct: 205 LLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGG 264

Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
           + P++V+Y+ L+DG  K G +  AL         +++ D+VT+ +LI    K G+ ++  
Sbjct: 265 LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTE 323

Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
            +Y +M   G+ PD      LA YN   +G+
Sbjct: 324 SIYSAMREMGLSPD------LATYNTMLNGN 348



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 90/170 (52%)

Query: 41  NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
           N L+EA+ L+E++    + P+ +TF  ++   CK G++ +  ++  +M + G   N V+Y
Sbjct: 3   NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSY 62

Query: 101 SCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD 160
           + L+D  FK+  +  A      M     + ++++ ++LIDGL K G ++EA Y F     
Sbjct: 63  TILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122

Query: 161 NHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
            +L+P+ +TY+ LI G CK G    A      M     +P+ +  S+L +
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLIN 172



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%)

Query: 4   KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
           K    D  L+    L +  L+ D   YN +I   C L    +A  + + +    +  ++ 
Sbjct: 420 KSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTT 479

Query: 64  TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
           T+  LI  +C    +  A M +S ML +    ++ TY+ L+ G  K+  +  A D+  E+
Sbjct: 480 TYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEI 539

Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
            +  + PN  +Y  L+ G CK    +E L  +   +    +P    Y +LI  + K G+ 
Sbjct: 540 KKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKM 599

Query: 184 TEAMQLYDSMLRNGIMP 200
            +A +L + M   G+ P
Sbjct: 600 KQAKELMNEMQTKGVSP 616



 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 12/198 (6%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           HL  A   +  +    + PDI TYN ++ G      + EA  L  ++    L PN+ T+ 
Sbjct: 493 HLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYE 552

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
            L+   CK     +   ++ +M+ KG       Y+ LI  + K   MK A ++  EM   
Sbjct: 553 TLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 612

Query: 127 NISPNIVSYSILIDGLC------------KRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
            +SP   +Y ILI G C            K     EA   F    D   +P   T A + 
Sbjct: 613 GVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACIS 672

Query: 175 RGYCKAGRPTEAMQLYDS 192
             +   G+  +A  L  S
Sbjct: 673 STFAAPGKKADARMLLKS 690


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 110/200 (55%)

Query: 9   DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
           D  L +FG+L   GL PD+ +YN +I G+     +D+A  LF K+    + PN +T++ L
Sbjct: 206 DLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSL 265

Query: 69  IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
           I+  CK   MD A  +  +M+  G + N +TY+CLI GY  S   K +  V++EM  + +
Sbjct: 266 INGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLL 325

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
            P++ + +  +  LCK G ++EA   F   +     PDV++Y  L+ GY  AG       
Sbjct: 326 VPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDN 385

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L++ M+  G++PD  + +TL
Sbjct: 386 LFNVMVCEGVVPDRHVFNTL 405



 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 1/198 (0%)

Query: 14  LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
           LF  +   G+ PD   +NT+I  Y  L  +D+++ +FE +T   + P+ ITF+ +I AFC
Sbjct: 386 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 445

Query: 74  KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
           + GR+DDA   F+ M++ G   +   YSCLI G    +++  A ++  +M    I P  +
Sbjct: 446 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 505

Query: 134 SY-SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
            + + +I+ LCK G + E        +     P+++T+  L+ GYC  G   EA+ L DS
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 565

Query: 193 MLRNGIMPDGLLLSTLAD 210
           M   G+ PD    +TL D
Sbjct: 566 MESVGVEPDIYTYNTLVD 583



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 112/199 (56%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L KE  +     +   +   G  P++IT+N+++ GYC +  + EAV L + +  V ++P+
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
             T+  L+D +CK GR+DDA  +F  ML K      V+Y+ ++ G F+++    A +++ 
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 634

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
           EM E+ ++ +I +Y+ ++ GLC+    +EA          ++  D++T+ I+IR   K G
Sbjct: 635 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 694

Query: 182 RPTEAMQLYDSMLRNGIMP 200
           R  EA +L+ ++   G++P
Sbjct: 695 RRQEAKELFAAISTYGLVP 713



 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 114/207 (55%)

Query: 2   LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
           L K   +D A ++  Q+   G+ P+ +TYN +I GY +     E+V++F++++   L P+
Sbjct: 269 LCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 328

Query: 62  SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
                  + A CK GR+ +A  +F  M+ KGPK +V++Y  L+ GY  +  +    +++ 
Sbjct: 329 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 388

Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
            M    + P+   ++ LI+   + G+M+++L  F       + PD++T++ +I  +C+ G
Sbjct: 389 VMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 448

Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
           R  +AM+ ++ M+  G+ PD  + S L
Sbjct: 449 RLDDAMEKFNHMIDTGVPPDTAVYSCL 475



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 94/177 (53%)

Query: 25  PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
           P I TYN +I  Y    R D  + +F +L    L P+  ++  LID F KEG +D A  +
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 85  FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
           F KM E+G   NVVTYS LI+G  K++ M  A  V  +M    + PN ++Y+ LI G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
            G+ +E++  F     + L+PDV      +   CK GR  EA  ++DSM+  G  PD
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 36/227 (15%)

Query: 8   LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT--- 64
           +D +L +F  +T +G+ PDIIT++T+I  +C L RLD+A++ F  +    + P++     
Sbjct: 415 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 474

Query: 65  ---------------------------------FTILIDAFCKEGRMDDATMMFSKMLEK 91
                                            FT +I+  CKEGR+ +   +   ++  
Sbjct: 475 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 534

Query: 92  GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
           G + N++T++ L+DGY    NMK A  + + M    + P+I +Y+ L+DG CK G +++A
Sbjct: 535 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 594

Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
           L  F   L   +    V+Y I++ G  +A R   A +++  M+ +G+
Sbjct: 595 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 641



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 107/202 (52%)

Query: 7   HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
           ++  A+ L   +   G+EPDI TYNT++ GYC   R+D+A+ LF  +   ++   S+++ 
Sbjct: 555 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 614

Query: 67  ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
           I++    +  R   A  MF +M+E G   ++ TY+ ++ G  ++     A  + E++   
Sbjct: 615 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM 674

Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
           N+  +I++++I+I  + K G  +EA   F       L+P ++TY ++I    K     +A
Sbjct: 675 NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDA 734

Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
             L+ SM ++   PD  +L+ +
Sbjct: 735 DNLFSSMEKSSCTPDSRILNEI 756



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 3/159 (1%)

Query: 46  AVQLFEKL---TCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
           AV+LF+++    C +  P   T+ ILI+ + +  R D    +F ++L  G   +V +Y+ 
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
           LIDG+ K   +  A D++ +M E  I PN+V+YS LI+GLCK   M++A       +   
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
           + P+ +TY  LI GY  +G   E+++++  M  + ++PD
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 328



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 59/107 (55%)

Query: 97  VVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
           + TY+ LI+ Y +++       V+  +    + P++ SY+ LIDG  K G +++A   F+
Sbjct: 189 IYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFY 248

Query: 157 CALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
              +  ++P+VVTY+ LI G CK     +A ++   M+  G+ P+ +
Sbjct: 249 KMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM 295



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%)

Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
           +P I +Y+ILI+   +    +  L  F   L   L PDV +Y  LI G+ K G   +A  
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 189 LYDSMLRNGIMPDGLLLSTL 208
           L+  M   GIMP+ +  S+L
Sbjct: 246 LFYKMEEQGIMPNVVTYSSL 265



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 11  ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
           A +LF  ++  GL P I+TY  +I         ++A  LF  +      P+S     +I 
Sbjct: 699 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 758

Query: 71  AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
               +G +  A    SK+ +KG      T S LI  Y  S N K
Sbjct: 759 MLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI--YLFSVNGK 800


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,297,403,711
Number of Sequences: 23463169
Number of extensions: 127402218
Number of successful extensions: 440828
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9179
Number of HSP's successfully gapped in prelim test: 3471
Number of HSP's that attempted gapping in prelim test: 270696
Number of HSP's gapped (non-prelim): 84411
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 74 (33.1 bits)