BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027412
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 247 bits (631), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 154/225 (68%), Gaps = 5/225 (2%)
Query: 2 LIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
L+ +CH ++ A K F L + +EPDI+TYNT+ICGYCSL RLDEA ++FE L P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N++T TILI CK MD A MFS M EKG K N VTY CL+D + KS +++ +F ++
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
EEM E ISP+IVSYSI+IDGLCKRG ++EA FH A+D LLPDVV YAILIRGYCK
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN----LQSSGSQEH 221
GR EA LY+ MLRNG+ PD LL L++YN L S G H
Sbjct: 790 GRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVH 834
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 1/217 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A +L + D G P+++T+ T+I G+C +D A LF+ + ++P+ I ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LID + K G + +FS+ L KG K +VV +S ID Y KS ++ +A VY+ M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
ISPN+V+Y+ILI GLC+ G + EA + L + P +VTY+ LI G+CK G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
LY+ M++ G PD ++ L D L G H +
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVD-GLSKQGLMLHAM 481
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 35/252 (13%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF------------- 50
K +D A LF + RG+EPD+I Y+T+I GY L +LF
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 51 ----------------------EKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
+++ C + PN +T+TILI C++GR+ +A M+ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
L++G + ++VTYS LIDG+ K N++S F +YE+M + P++V Y +L+DGL K+GLM
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
A+ L + +VV + LI G+C+ R EA++++ M GI PD +T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 209 ADYNLQSSGSQE 220
++ +E
Sbjct: 538 MRVSIMEGRLEE 549
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 101/191 (52%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++GQ+ RG+EP I+TY+++I G+C L L+E + + P+ + + +L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
K+G M A KML + + NVV ++ LIDG+ + A V+ M I P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++ +++ ++ G +EEAL+ F L PD + Y LI +CK +PT +QL+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 191 DSMLRNGIMPD 201
D M RN I D
Sbjct: 590 DLMQRNKISAD 600
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+K L A ++ ++ +G+ P+++TY +I G C R+ EA ++ ++ ++P+
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T++ LID FCK G + ++ M++ G +VV Y L+DG K M A +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M +I N+V ++ LIDG C+ +EAL F + PDV T+ ++R GR
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA+ L+ M + G+ PD L TL D
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLID 574
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
++K+ GQ + +++ +N++I G+C LNR DEA+++F + +KP+ TFT ++
Sbjct: 484 SVKMLGQ----SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
EGR+++A +F +M + G + + + Y LID + K +++ M N IS
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+I +++I L K +E+A F+ ++ + PD+VTY +I GYC R EA +++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 191 DSMLRNGIMPDGLLLSTL 208
+ + P+ + L+ L
Sbjct: 660 ELLKVTPFGPNTVTLTIL 677
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+L K +D A+++F + ++G +P+ +TY ++ + ++ + +LFE++ + P
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ ++++I+ID CK GR+D+AT +F + ++ +VV Y+ LI GY K + A +Y
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLME 149
E M N + P D L +R L E
Sbjct: 800 EHMLRNGVKP---------DDLLQRALSE 819
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 164 bits (416), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 130/207 (62%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ FCK R+D+ +F +M ++G N VTY+ LI G+F++++ +A V++
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + + PNI++Y+ L+DGLCK G +E+A+ F + + P + TY I+I G CKAG
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + L+ S+ G+ PD ++ +T+
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 117/196 (59%), Gaps = 2/196 (1%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A +F + + P+++TYNT+I G+C R+DE V+LF +++ L N++T+T
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI F + D+A M+F +M+ G N++TY+ L+DG K+ ++ A V+E + +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
+ P I +Y+I+I+G+CK G +E+ F C+L + PDV+ Y +I G+C+ G E
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 186 AMQLYDSMLRNGIMPD 201
A L+ M +G +PD
Sbjct: 559 ADALFRKMREDGPLPD 574
Score = 137 bits (345), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 116/207 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A L ++ +E +++ Y+T+I C D+A+ LF ++ ++PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT++ LI C R DA+ + S M+E+ NVVT++ LID + K + A +Y+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I P+I +YS LI+G C ++EA + F + P+VVTY LI G+CKA
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R E ++L+ M + G++ + + +TL
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTL 441
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 120/209 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H D AL LF ++ ++G+ P++ITY+++I C+ R +A +L + ++ PN
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG++ +A ++ +M+++ ++ TYS LI+G+ + A ++E
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + PN+V+Y+ LI+G CK ++E + F L+ + VTY LI G+ +A
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A ++ M+ +G+ P+ + +TL D
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G PD IT+ T+I G N+ EAV L +++ +PN
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ ++++ CK G +D A + +KM +ANVV YS +ID K ++ A +++ E
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M + PN+++YS LI LC +A ++ + P+VVT+ LI + K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA +LYD M++ I PD S+L +
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 114/207 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ + AL L G++ G EP I+T ++++ GYC R+ +AV L +++ + +P++I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + N+VTY +++G K ++ AF++ +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I N+V YS +ID LCK ++AL F + + P+V+TY+ LI C R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L M+ I P+ + + L D
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALID 338
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A+ LFG + P I +N ++ + + D + L EK+ + + N T+ I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI+ FC+ ++ A + KM++ G + ++VT S L++GY + + A + ++M E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P+ ++++ LI GL EA+ + P++VTY +++ G CK G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
L + M I + ++ ST+ D
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVID 268
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
+LD+A+ LF + + P+ F L+ A K + D + KM G N+ TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
LI+ + + + A + +M + P+IV+ S L++G C + +A+ ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
PD +T+ LI G + +EA+ L D M++ G P+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ A+ +F L +EP I TYN +I G C ++++ LF L+ +KP+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
I + +I FC++G ++A +F KM E GP
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 128/207 (61%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R+++ +F +M ++G N VTY+ LI G F++ + A +++
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + + P+I++YSIL+DGLCK G +E+AL F + + PD+ TY I+I G CKAG
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + L+ S+ G+ P+ ++ +T+
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Score = 147 bits (370), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 119/207 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ +E D++ Y TII C+ +++A+ LF ++ ++PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI C GR DA+ + S M+E+ NVVT+S LID + K + A +Y+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I P+I +YS LI+G C ++EA + F + P+VVTY LI+G+CKA
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R E M+L+ M + G++ + + +TL
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTL 436
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 120/204 (58%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ AL LF ++ ++G+ P+++TYN++I C+ R +A +L + ++ PN +TF+
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LIDAF KEG++ +A ++ +M+++ ++ TYS LI+G+ + A ++E M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ PN+V+Y+ LI G CK +EE + F L+ + VTY LI+G +AG A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
+++ M+ +G+ PD + S L D
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLD 473
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 120/209 (57%), Gaps = 2/209 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A +F + + P+++TYNT+I G+C R++E ++LF +++ L N++T+
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI + G D A +F KM+ G +++TYS L+DG K ++ A V+E + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
+ P+I +Y+I+I+G+CK G +E+ + C+L + P+V+ Y +I G+C+ G E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDG-WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
A L+ M +G +P+ +TL L+
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 120 bits (300), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 108/198 (54%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +PD+ TY T++ G C +D A+ L +K+ +++ + + +T +ID
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A C ++DA +F++M KG + NVVTY+ LI A + +M E I+P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+V++S LID K G + EA + + + PD+ TY+ LI G+C R EA ++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 191 DSMLRNGIMPDGLLLSTL 208
+ M+ P+ + +TL
Sbjct: 384 ELMISKDCFPNVVTYNTL 401
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 113/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + G++ G EPDI+T ++++ GYC R+ EAV L +++ ++ +PN++
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF LI + +A + +M+ +G + ++ TY +++G K ++ A + ++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ I ++V Y+ +ID LC + +AL F + + P+VVTY LIR C GR
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L M+ I P+ + S L D
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALID 333
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 3/206 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ +P+ +T+NT+I G N+ EAV L +++ +P+
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T+ +++ CK G +D A + KM + +A+VV Y+ +ID +N+ A +++ E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I PN+V+Y+ LI LC G +A ++ + P+VVT++ LI + K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
EA +LYD M++ I PD S+L
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSL 366
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 119/217 (54%), Gaps = 4/217 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ ++LF +++ RGL + +TYNT+I G D A ++F+K+ + P+ I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D CK G+++ A ++F + + + ++ TY+ +I+G K+ ++ +D++ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ PN++ Y+ +I G C++GL EEA F ++ LP+ TY LIR + G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
+ +L M G + D ++++ L D L+ S
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 104/206 (50%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
+ LD A+ LFG++ P I+ +N ++ +N+ D + L E++ +++ + +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ ILI+ FC+ ++ A + KM++ G + ++VT S L++GY + + A + ++M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
PN V+++ LI GL EA+ + PD+ TY ++ G CK G
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
A+ L M + I D ++ +T+ D
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIID 263
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ AL +F L +EPDI TYN +I G C ++++ LF L+ +KPN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I +T +I FC++G ++A +F +M E G N TY+ LI + + ++ ++ +
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 122 EM 123
EM
Sbjct: 595 EM 596
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 127/207 (61%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R+D+ +F +M ++G N VTY+ LI G+F+++ +A V++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + + P+I++YSIL+DGLC G +E AL F + + PD+ TY I+I G CKAG
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + L+ S+ G+ P+ + +T+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Score = 150 bits (379), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 120/207 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ +EP ++ YNTII C+ +++A+ LF ++ ++PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI C GR DA+ + S M+E+ NVVT+S LID + K + A +Y+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I P+I +YS LI+G C ++EA + F + P+VVTY LI+G+CKA
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R E M+L+ M + G++ + + +TL
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 2/209 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A +F + + P+++TYNT+I G+C R+DE ++LF +++ L N++T+T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI F + D+A ++F +M+ G +++TYS L+DG + +++A V+E + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
+ P+I +Y+I+I+G+CK G +E+ F C+L + P+VVTY ++ G+C+ G E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
A L+ M G +PD +TL +L+
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 119/204 (58%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ AL LF ++ ++G+ P+++TYN++I C+ R +A +L + ++ PN +TF+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LIDAF KEG++ +A ++ +M+++ ++ TYS LI+G+ + A ++E M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ PN+V+Y+ LI G CK ++E + F L+ + VTY LI G+ +A A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
++ M+ +G++PD + S L D
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLD 474
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 3/206 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L GQ+ + G +PD T+NT+I G NR EAV L +++ +P+
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ I+++ CK G +D A + KM + + VV Y+ +ID +N+ A +++ E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I PN+V+Y+ LI LC G +A ++ + P+VVT++ LI + K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
EA +LYD M++ I PD S+L
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSL 367
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 112/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + ++ G EPDI+T N+++ G+C NR+ +AV L ++ + +P+S
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF LI + R +A + +M+ KG + ++VTY +++G K ++ A + ++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ I P +V Y+ +ID LC + +AL F + + P+VVTY LIR C GR
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L M+ I P+ + S L D
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALID 334
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + A+ L ++ +G +PD++TY ++ G C +D A+ L +K+ +++P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + +IDA C ++DA +F++M KG + NVVTY+ LI A +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M E I+PN+V++S LID K G + EA + + + PD+ TY+ LI G+C
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R EA +++ M+ P+ + +TL
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTL 402
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 115/217 (52%), Gaps = 4/217 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D ++LF +++ RGL + +TY T+I G+ D A +F+++ + P+ +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D C G+++ A ++F + + ++ TY+ +I+G K+ ++ +D++ +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ PN+V+Y+ ++ G C++GL EEA F + LPD TY LIR + + G
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
+ +L M + D GL+ + L D L S
Sbjct: 588 AASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKS 624
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L Q+ + G+ ++ TY+ +I +C ++L A+ + K+ + +P+ +T
Sbjct: 97 FDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ FC R+ DA + +M+E G + + T++ LI G F+ A + + M
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P++V+Y I+++GLCKRG ++ AL + P VV Y +I C +A+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
L+ M GI P+ + L+ L +Y S S+
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ + LD A+ LFG + P I+ ++ ++ +N+ D + L E++ + + N
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T++ILI+ FC+ ++ A + +KM++ G + ++VT + L++G+ + A + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M E P+ +++ LI GL + EA+ + PD+VTY I++ G CK G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A+ L M + I P ++ +T+ D
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIID 264
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 130/207 (62%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI FCK R+++ +F +M ++G N VTY+ LI G+F++++ +A V++
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + PNI++Y+IL+DGLCK G + +A+ F + + PD+ TY I+I G CKAG
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + +L+ ++ G+ P+ + +T+
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTM 544
Score = 153 bits (387), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 121/207 (58%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ +E D++ YNTII G C +D+A+ LF ++ ++P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++ LI C GR DA+ + S M+E+ NVVT+S LID + K + A +Y+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I P+I +YS LI+G C ++EA + F + P+VVTY+ LI+G+CKA
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R E M+L+ M + G++ + + +TL
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 118/209 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ ++G+ PD+ TY+++I C+ R +A +L + ++ PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF+ LIDAF KEG++ +A ++ +M+++ ++ TYS LI+G+ + A ++E
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + PN+V+YS LI G CK +EE + F L+ + VTY LI G+ +A
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A ++ M+ G+ P+ L + L D
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 3/206 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD T+ T+I G N+ EAV L +++ +P+
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +++ CK G +D A + KM + +A+VV Y+ +IDG K ++M A +++ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I P++ +YS LI LC G +A ++ + P+VVT++ LI + K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
EA +LYD M++ I PD S+L
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 115/207 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + ++ G EPDI+T ++++ GYC R+ +AV L +++ + KP++
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + ++VTY +++G K ++ A + ++M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ I ++V Y+ +IDGLCK M++AL F + + PDV TY+ LI C GR
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L M+ I P+ + S L D
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALID 336
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ ++LF +++ RGL + +TY T+I G+ D A +F+++ V + PN +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+D CK G++ A ++F + + ++ TY+ +I+G K+ ++ ++++ +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+SPN+++Y+ +I G C++G EEA ++ LP+ TY LIR + G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
+ +L M G D GL+ + L D L S
Sbjct: 590 EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 104/203 (51%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+ LFG + P I+ +N ++ +N+ + + L E++ + + + T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I+ FC+ ++ A + +KM++ G + ++VT S L++GY S+ + A + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P+ +++ LI GL EA+ + PD+VTY ++ G CK G A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
L M + I D ++ +T+ D
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIID 266
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L A+ +F L +EPDI TYN +I G C ++++ +LF L+ + PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I + +I FC++G ++A + KM E GP N TY+ LI + + +++ ++ +
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 122 EM 123
EM
Sbjct: 598 EM 599
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
++D+AV LF + + P+ + F L+ A K + + + +M G ++ TYS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
I+ + + + A V +M + P+IV+ S L++G C + +A+ ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
PD T+ LI G + +EA+ L D M++ G PD + T+ +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 125/205 (60%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE L A KLF ++ R ++P+I+TYN++I G+C +RLDEA Q+F + P+ +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ FCK ++ D +F M +G N VTY+ LI G+F++ + +A V+++M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ + PNI++Y+ L+DGLCK G +E+A+ F + + PD+ TY I+ G CKAG+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
+ L+ S+ G+ PD + +T+
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTM 526
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 121/215 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E D++ Y+T+I C +D+A+ LF ++ ++P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++ LI C GR DA+ + S MLE+ NVVT++ LID + K + A +++
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I PNIV+Y+ LI+G C ++EA F + LPDVVTY LI G+CKA
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
+ + M+L+ M R G++ + + +TL Q+S
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++F + + PD++TYNT+I G+C ++ + ++LF ++ L N++T+T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI F + D+A M+F +M+ G N++TY+ L+DG K+ ++ A V+E + ++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
+ P+I +Y+I+ +G+CK G +E+ F C+L + PDV+ Y +I G+CK G E
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
A L+ M +G +PD +TL +L+
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 119/209 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ ++G+ PD+ TY+++I C+ R +A +L + ++ PN
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG++ +A +F +M+++ N+VTY+ LI+G+ + A ++
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + P++V+Y+ LI+G CK + + + F L+ + VTY LI G+ +A
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A ++ M+ +G+ P+ + +TL D
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 115/209 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + L AL + G++ G P I+T N+++ G+C NR+ EAV L +++ + +P+
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++TFT L+ + + +A + +M+ KG + ++VTY +I+G K A ++
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + I ++V YS +ID LCK +++AL F + + PDV TY+ LI C G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
R ++A +L ML I P+ + ++L D
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLID 318
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 3/199 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD +T+ T++ G N+ EAV L E++ +P+
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +I+ CK G D A + +KM + +A+VV YS +ID K +++ A +++ E
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I P++ +YS LI LC G +A L+ + P+VVT+ LI + K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 183 PTEAMQLYDSMLRNGIMPD 201
EA +L+D M++ I P+
Sbjct: 326 LIEAEKLFDEMIQRSIDPN 344
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A+ LFG++ P I+ ++ ++ + + D + EK+ + + N T+ I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I+ C+ ++ A + KM++ G ++VT + L++G+ + A + ++M E
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P+ V+++ L+ GL + EA+ + PD+VTY +I G CK G P A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
L + M + I D ++ ST+ D
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVID 248
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 22 GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
G+ ++ TYN +I C ++L A+ + K+ + P+ +T L++ FC R+ +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 82 TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
+ +M+E G + + VT++ L+ G F+ A + E M P++V+Y +I+G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
LCKRG + AL + + DVV Y+ +I CK +A+ L+ M GI PD
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 202 GL----LLSTLADYNLQSSGSQ 219
L+S L +Y S S+
Sbjct: 275 VFTYSSLISCLCNYGRWSDASR 296
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ A+ +F L +EPDI TYN + G C ++++ LF L+ +KP+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I + +I FCK+G ++A +F KM E GP + TY+ LI + + + ++ ++ +
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 122 EMCENNISPNIVSYSI----LIDGLCKRGLME 149
EM + + +Y + L DG +G +E
Sbjct: 580 EMRSCRFAGDASTYGLVTDMLHDGRLDKGFLE 611
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 77 RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
++D+A +F +M++ P ++V +S L+ K + E+M +S N+ +Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
I+I+ LC+R + AL + P +VT L+ G+C R +EA+ L D M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
G PD + +TL Q + + E
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASE 188
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 157 bits (396), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 127/207 (61%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++P I+TY+++I G+C +RLDEA Q+FE + P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R+++ +F +M ++G N VTY+ LI G F++ + A ++++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + + PNI++Y+ L+DGLCK G +E+A+ F + + P + TY I+I G CKAG
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + L+ ++ G+ PD + +T+
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 118/207 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D A L ++ LEP ++ YNTII G C +D+A+ LF+++ ++PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI C GR DA+ + S M+E+ +V T+S LID + K + A +Y+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I P+IV+YS LI+G C ++EA F + H PDVVTY LI+G+CK
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R E M+++ M + G++ + + + L
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNIL 437
Score = 137 bits (344), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 123/209 (58%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ +G+ P+++TY+++I C+ R +A +L + ++ P+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF+ LIDAF KEG++ +A ++ +M+++ ++VTYS LI+G+ + A ++E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + P++V+Y+ LI G CK +EE + F L+ + VTY ILI+G +AG
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A +++ M+ +G+ P+ + +TL D
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 113/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + G++ G EP+I+T ++++ GYC R+ EAV L +++ +PN++
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF LI + +A + +M+ KG + ++VTY +++G K + AF++ +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ + P ++ Y+ +IDGLCK M++AL F + P+VVTY+ LI C GR
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L M+ I PD S L D
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALID 334
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ +G +PD++TY ++ G C D A L K+ +L+P + + +ID
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK MDDA +F +M KG + NVVTYS LI A + +M E I+P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++ ++S LID K G + EA + + + P +VTY+ LI G+C R EA Q++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 191 DSMLRNGIMPDGLLLSTL 208
+ M+ PD + +TL
Sbjct: 385 EFMVSKHCFPDVVTYNTL 402
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 114/206 (55%), Gaps = 3/206 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ G +P+ +T+NT+I G N+ EA+ L +++ +P+
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ ++++ CK G D A + +KM + + V+ Y+ +IDG K ++M A ++++E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I PN+V+YS LI LC G +A ++ + PDV T++ LI + K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
EA +LYD M++ I P + S+L
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ E LD A+ LFG++ P II ++ ++ +N+ D + L E++ + + N
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T++ILI+ FC+ ++ A + KM++ G + N+VT S L++GY S+ + A + ++
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M PN V+++ LI GL EA+ + PD+VTY +++ G CK G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A L + M + + P L+ +T+ D
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ +++F +++ RGL + +TYN +I G D A ++F+++ + PN +T+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L+D CK G+++ A ++F + + + TY+ +I+G K+ ++ +D++ +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ P++V+Y+ +I G C++G EEA F ++ LP+ Y LIR + G +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 187 MQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
+L M G D GL+ + L D L S
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+ K D + L Q+ + G+ + TY+ +I +C ++L A+ + K+ + +PN
Sbjct: 91 IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 150
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T + L++ +C R+ +A + +M G + N VT++ LI G F A + +
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M P++V+Y ++++GLCKRG + A + L P V+ Y +I G CK
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 182 RPTEAMQLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
+A+ L+ M GI P+ + L+S L +Y S S+
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ A+ +F L +EP I TYN +I G C ++++ LF L+ +KP+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + +I FC++G ++A +F +M E G N Y+ LI + + +++ ++ +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 122 EM 123
EM
Sbjct: 596 EM 597
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ LF L+ +G++PD++ YNT+I G+C +EA LF+++ PNS
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
+ LI A ++G + + + +M G + T
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 121/207 (58%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE A KL+ + R ++PDI TYN+++ G+C +RLD+A Q+FE + P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R++D T +F +M +G + VTY+ LI G F + +A V++
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + + P+I++YSIL+DGLC G +E+AL F + + D+ Y +I G CKAG
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + L+ S+ G+ P+ + +T+
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 116/207 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E D++ +NTII C +D+A+ LF+++ ++PN
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI C GR DA+ + S M+EK N+VT++ LID + K A +Y+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + +I P+I +Y+ L++G C +++A F + PDVVTY LI+G+CK+
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R + +L+ M G++ D + +TL
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTL 441
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 115/209 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ +G+ P+++TY+++I CS R +A QL + ++ PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG+ +A ++ M+++ ++ TY+ L++G+ + A ++E
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + P++V+Y+ LI G CK +E+ F L+ D VTY LI+G G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A +++ M+ +G+ PD + S L D
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 3/208 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G PD IT+ T+I G N+ EAV L +++ +PN
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ ++++ CK G D A + +KM +A+VV ++ +ID K +++ A ++++E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I PN+V+YS LI LC G +A ++ + P++VT+ LI + K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA +LYD M++ I PD ++L +
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 118/209 (56%), Gaps = 2/209 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++F + + PD++TYNT+I G+C R+++ +LF +++ L +++T+T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI +G D+A +F +M+ G +++TYS L+DG + ++ A +V++ M ++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
I +I Y+ +I+G+CK G +++ + C+L + P+VVTY +I G C E
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
A L M +G +P+ +TL +L+
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 113/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ + AL L G++ G EP I+T ++++ GYC R+ +AV L +++ + +P++I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + N+VTY +++G K + A ++ +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I ++V ++ +ID LCK +++AL F + P+VVTY+ LI C GR
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A QL M+ I P+ + + L D
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALID 338
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ + LD A+ LFG + P I+ +N ++ + + D + L EK+ +++
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T+ ILI+ FC+ ++ A + KM++ G + ++VT S L++GY + + A + ++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M E P+ ++++ LI GL EA+ + P++VTY +++ G CK G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A+ L + M I D ++ +T+ D
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIID 268
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D LF L+ +G++P+++TYNT+I G CS L EA L +K+ PNS
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 64 TFTILIDAFCKEG 76
T+ LI A ++G
Sbjct: 577 TYNTLIRAHLRDG 589
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 121/200 (60%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ LD A LF ++ +G + DIITYNT+I G+C+ R D+ +L + ++ PN
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF++LID+F KEG++ +A + +M+++G N +TY+ LIDG+ K ++ A + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M P+I++++ILI+G CK +++ L F ++ + VTY L++G+C++G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+ A +L+ M+ + PD
Sbjct: 453 KLEVAKKLFQEMVSRRVRPD 472
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 119/201 (59%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A +L ++ RG+ P+ ITYN++I G+C NRL+EA+Q+ + + P+
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF ILI+ +CK R+DD +F +M +G AN VTY+ L+ G+ +S ++ A +++
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + P+IVSY IL+DGLC G +E+AL F + + D+ Y I+I G C A
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 182 RPTEAMQLYDSMLRNGIMPDG 202
+ +A L+ S+ G+ D
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDA 543
Score = 140 bits (352), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A++L ++ +R ++ D + Y+ II G C LD A LF ++ K + IT+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC GR DD + M+++ NVVT+S LID + K ++ A + +EM + I+P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N ++Y+ LIDG CK +EEA+ + PD++T+ ILI GYCKA R + ++L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
M G++ + + +TL QS
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQS 451
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 35/239 (14%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
EC + AL+L ++ + G +P +IT NT++ G C ++ +AV L +++ +PN +T
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 65 -----------------------------------FTILIDAFCKEGRMDDATMMFSKML 89
++I+ID CK+G +D+A +F++M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 90 EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
KG KA+++TY+ LI G+ + + +M + ISPN+V++S+LID K G +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
EA + + P+ +TY LI G+CK R EA+Q+ D M+ G PD + + L
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 114/214 (53%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L A G++ G EPD + +NT++ G C R+ EA++L +++ + KP IT
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L++ C G++ DA ++ +M+E G + N VTY +++ KS A ++ +M E
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
NI + V YSI+IDGLCK G ++ A F+ D++TY LI G+C AGR +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
+L M++ I P+ + S L D ++ +E
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 107/198 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D L+LF +++ RG+ + +TYNT++ G+C +L+ A +LF+++ +++P+ +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++ IL+D C G ++ A +F K+ + + ++ Y +I G + + A+D++ +
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ + +Y+I+I LC++ + +A F + PD +TY ILIR +
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 184 TEAMQLYDSMLRNGIMPD 201
T A +L + M +G D
Sbjct: 595 TTAAELIEEMKSSGFPAD 612
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K + L L Q+ +G+ I T + +I +C +L A K+ + +P+++
Sbjct: 100 KTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTV 159
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
F L++ C E R+ +A + +M+E G K ++T + L++G + + A + + M
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
E PN V+Y +++ +CK G A+ + ++ D V Y+I+I G CK G
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
A L++ M G D + +TL
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTL 304
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 95/202 (47%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF + P +I +N + + + + L +++ + + T +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ FC+ ++ A K+++ G + + V ++ L++G + A ++ + M E
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P +++ + L++GLC G + +A+ ++ P+ VTY ++ CK+G+ AM+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
L M I D + S + D
Sbjct: 250 LLRKMEERNIKLDAVKYSIIID 271
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
+ D+AV LF + + P I F L A K + + + +M KG ++ T S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
+I+ + + + + AF ++ + P+ V ++ L++GLC + EAL ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
P ++T L+ G C G+ ++A+ L D M+ G P+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A LF L +G++ D YN +I C + L +A LF K+T P+ +T+
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
ILI A + A + +M G A+V T +I+ + KS D+
Sbjct: 583 ILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDM 635
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 135/252 (53%), Gaps = 35/252 (13%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +KE L A +L+ ++ RG+ PD ITYN++I G+C N L EA Q+F+ + +P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T++ILI+++CK R+DD +F ++ KG N +TY+ L+ G+ +S + +A +++
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------------------- 152
+EM + P++V+Y IL+DGLC G + +AL
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 153 ------YAFHCAL-DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
++ C+L D + PDVVTY ++I G CK G +EA L+ M +G PD
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 206 STLADYNLQSSG 217
+ L +L SG
Sbjct: 564 NILIRAHLGGSG 575
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ D AL LF ++ +G++ D++TY+++I G C+ + D+ ++ ++ + P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF+ LID F KEG++ +A ++++M+ +G + +TY+ LIDG+ K + A +++
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M P+IV+YSILI+ CK +++ + F L+P+ +TY L+ G+C++G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
+ A +L+ M+ G+ P G+LL L D
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL LF ++ +R ++ ++ Y+ +I C D+A+ LF ++ +K + +T++ LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C +G+ DD M +M+ + +VVT+S LID + K + A ++Y EM I+P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+ ++Y+ LIDG CK + EA F + PD+VTY+ILI YCKA R + M+L+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 191 DSMLRNGIMPDGLLLSTLA 209
+ G++P+ + +TL
Sbjct: 409 REISSKGLIPNTITYNTLV 427
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 117/200 (58%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A + G+ G EPD IT++T++ G+C R+ EAV L +++ ++ +P+ +T + LI+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C +GR+ +A ++ +M+E G + + VTY +++ KS N A D++ +M E NI
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++V YSI+ID LCK G ++AL F+ + DVVTY+ LI G C G+ + ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 191 DSMLRNGIMPDGLLLSTLAD 210
M+ I+PD + S L D
Sbjct: 304 REMIGRNIIPDVVTFSALID 323
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E + A+ L ++ + PD++T +T+I G C R+ EA+ L +++ +P+ +T
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ +++ CK G A +F KM E+ KA+VV YS +ID K + A ++ EM
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
I ++V+YS LI GLC G ++ + +++PDVVT++ LI + K G+
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA +LY+ M+ GI PD + ++L D
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLID 358
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 109/195 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + D K+ ++ R + PD++T++ +I + +L EA +L+ ++ + P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+IT+ LID FCKE + +A MF M+ KG + ++VTYS LI+ Y K++ + ++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
E+ + PN ++Y+ L+ G C+ G + A F + + P VVTY IL+ G C G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 182 RPTEAMQLYDSMLRN 196
+A+++++ M ++
Sbjct: 470 ELNKALEIFEKMQKS 484
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 117/217 (53%), Gaps = 4/217 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D ++LF +++ +GL P+ ITYNT++ G+C +L+ A +LF+++ + P+ +
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+D C G ++ A +F KM + + Y+ +I G + + A+ ++ +
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ + P++V+Y+++I GLCK+G + EA F ++ PD TY ILIR +
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 576
Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
+++L + M G D +++ L+D L S
Sbjct: 577 ISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
I + ++ A+ LF + P I +N + + D + + + ++ +
Sbjct: 46 IVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDM 105
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T TI+I+ +C++ ++ A + + + G + + +T+S L++G+ + A + +
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M E P++V+ S LI+GLC +G + EAL ++ PD VTY ++ CK+G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A+ L+ M I + S + D
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVID 253
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ L A LF ++ + G PD TYN +I + + L +V+L E++ +
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 62 SITFTILIDAFCKEGRMDDA 81
S T ++ID + R+D +
Sbjct: 595 SSTIKMVIDML-SDRRLDKS 613
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 115/181 (63%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K+ L A KL+ ++ R ++P+I TY+++I G+C L+RL EA Q+ E + PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ FCK R+D +F +M ++G N VTY+ LI G+F++++ +A V++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + PNI++Y+IL+DGLCK G + +A+ F + + PD+ TY I+I G CKAG
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 182 R 182
+
Sbjct: 513 K 513
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 115/207 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E +++ Y+T+I C D+A+ LF ++ ++PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT++ LI C GR DA+ + S M+E+ N+VT+S LID + K + A +YE
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I PNI +YS LI+G C + EA + LP+VVTY LI G+CKA
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R + M+L+ M + G++ + + +TL
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTL 434
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 117/209 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H D AL LF ++ ++G+ P++ITY+++I C+ R +A +L + ++ PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF+ LIDAF K+G++ A ++ +M+++ N+ TYS LI+G+ + A + E
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + PN+V+Y+ LI+G CK +++ + F L+ + VTY LI G+ +A
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A ++ M+ G+ P+ L + L D
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 110/195 (56%)
Query: 16 GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
G++ G EPDI+T N+++ G+C NR+ +AV L +++ + KP+++TFT LI
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 76 GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSY 135
+ +A + +M+++G + ++VTY +++G K + A ++ +M I N+V Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 136 SILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
S +ID LCK ++AL F + + P+V+TY+ LI C GR ++A +L M+
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 196 NGIMPDGLLLSTLAD 210
I P+ + S L D
Sbjct: 317 RKINPNLVTFSALID 331
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 113/208 (54%), Gaps = 3/208 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD +T+ T+I G N+ EAV L +++ +P+
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +++ CK G D A + +KM +ANVV YS +ID K ++ A +++ E
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M + PN+++YS LI LC G +A ++ + P++VT++ LI + K G+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+A +LY+ M++ I P+ S+L +
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 39/256 (15%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ + LD A+ LFG + P II ++ ++ +N+ D + EK+ + + N
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113
Query: 63 ITFTILIDAFCK-----------------------------------EGRMDDATMMFSK 87
T+ ILI+ FC+ R+ DA + +
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 88 MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
M+E G K + VT++ LI G F A + + M + P++V+Y +++GLCKRG
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL---- 203
+ AL + + +VV Y+ +I CK +A+ L+ M G+ P+ +
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 204 LLSTLADYNLQSSGSQ 219
L+S L +Y S S+
Sbjct: 294 LISCLCNYGRWSDASR 309
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D ++LF +++ RGL + +TY T+I G+ D A +F+++ V + PN +
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
T+ IL+D CK G++ A ++F + + ++ TY+ +I+G K+ K
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 123/206 (59%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+KE + A + + ++ R L+PDI+TY+ +I G C +RLDEA ++F + P+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T++ILI+ +CK +++ +F +M ++G N VTY+ LI GY ++ + A +++
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M + PNI++Y++L+ GLC G +E+AL N + D+VTY I+IRG CKAG
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
+A +Y S+ G+MPD +T+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTM 472
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL +F Q+ G +P+++ YNTII G C ++D A+ L ++ + P+ +T+ LI
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C GR DAT M S M ++ +V T++ LID K + A + YEEM ++ P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+IV+YS+LI GLC ++EA F + PDVVTY+ILI GYCK+ + M+L+
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 191 DSMLRNGIMPDGLLLSTL 208
M + G++ + + + L
Sbjct: 350 CEMSQRGVVRNTVTYTIL 367
Score = 130 bits (327), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 118/213 (55%), Gaps = 4/213 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ G+ PD++TYN++I G CS R +A ++ +T ++ P+
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF LIDA KEGR+ +A + +M+ + ++VTYS LI G + A +++
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M P++V+YSILI+G CK +E + F ++ + VTY ILI+GYC+AG
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 182 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 210
+ A +++ M+ G+ P+ +LL L D
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 121/196 (61%), Gaps = 2/196 (1%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++FG + +G PD++TY+ +I GYC +++ ++LF +++ + N++T+T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
ILI +C+ G+++ A +F +M+ G N++TY+ L+ G + ++ A + +M +N
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
+ +IV+Y+I+I G+CK G + +A + +C+L+ L+PD+ TY ++ G K G E
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADA-WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
Query: 186 AMQLYDSMLRNGIMPD 201
A L+ M +GI+P+
Sbjct: 485 ADALFRKMKEDGILPN 500
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 110/200 (55%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D + L+ Q+ G+ ++ T N ++ +C ++L A+ K+ + +P+ +TF L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
++ FC+ R+ DA MF +M+ G K NVV Y+ +IDG KS+ + +A D+ M ++ I
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P++V+Y+ LI GLC G +A C + PDV T+ LI K GR +EA +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 189 LYDSMLRNGIMPDGLLLSTL 208
Y+ M+R + PD + S L
Sbjct: 278 FYEEMIRRSLDPDIVTYSLL 297
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L AL G++ G EP I+T+ +++ G+C +R+ +A+ +F+++ + KPN + +
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID CK ++D+A + ++M + G +VVTY+ LI G S A + M +
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
I P++ +++ LID K G + EA + + L PD+VTY++LI G C R EA
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
+++ M+ G PD + S L +
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILIN 334
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
I+ LD +L LF + P I ++ ++ + + D + L+E++ + + N
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T IL++ FC+ ++ A KM++ G + ++VT+ L++G+ + + A ++++
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M PN+V Y+ +IDGLCK ++ AL + + + PDVVTY LI G C +GR
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A ++ M + I PD + L D
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALID 264
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 95/163 (58%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +KLF +++ RG+ + +TY +I GYC +L+ A ++F ++ + PN I
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +L+ C G+++ A ++ + M + G A++VTY+ +I G K+ + A+D+Y +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPD 166
+ P+I +Y+ ++ GL K+GL EA F ++ +LP+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 5 ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA---------------VQ 48
+CH L +L FG+LT G +PD++T+NT++ G C +R+ EA V
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 49 LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF 108
LF+++ + L P ITF LI+ C EGR+ +A + +KM+ KG +VVTY +++G
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 109 KSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV 168
K + KSA ++ +M E +I P++V YS +ID LCK G +A Y F L+ + P+V
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 169 TYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
TY +I G+C GR ++A +L M+ I PD L + L
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A L ++ +GL D++TY TI+ G C + A+ L K+ +KP+ + ++ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK+G DA +FS+MLEKG NV TY+C+IDG+ A + +M E I+P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++++++ LI K G + EA L + PD VTY +I G+CK R +A ++
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 191 DSMLRNGIMPDGLLLSTLAD 210
D M PD + +T+ D
Sbjct: 425 DLMAS----PDVVTFNTIID 440
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ LF Q+ + GL P +IT+NT+I G C R+ EA L K+ L + +T+ +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G A + SKM E K +VV YS +ID K + A ++ EM E I+P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+ +Y+ +IDG C G +A ++ + PDV+T+ LI K G+ EA +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 191 DSMLRNGIMPDGLLLSTL 208
D ML I PD + +++
Sbjct: 390 DEMLHRCIFPDTVTYNSM 407
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 111/203 (54%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D ++L +++ RGL + TYNT+I G+C ++ L+ A LF+++ + P++IT I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ FC+ ++++A +F + + V Y+ +I G K + A+D++ + +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ P++ +Y+++I G C + + +A FH DN PD TY LIRG KAG +++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
+L M NG D + +AD
Sbjct: 628 ELISEMRSNGFSGDAFTIKMVAD 650
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K D A +F D PD++T+NTII YC R+DE +QL +++ L N+
Sbjct: 413 KHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI FC+ ++ A +F +M+ G + +T + L+ G+ +++ ++ A +++E +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
+ I + V+Y+I+I G+CK ++EA F C+L H + PDV TY ++I G+C
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
++A L+ M NG PD +TL
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 72/282 (25%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ H A LF ++ ++G+ P++ TYN +I G+CS R +A +L + ++ P+
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 62 SITFTILIDA-----------------------------------FCKEGRMDDATMMFS 86
+TF LI A FCK R DDA MF
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Query: 87 KML-------------------------------EKGPKANVVTYSCLIDGYFKSQNMKS 115
M +G AN TY+ LI G+ + N+ +
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
A D+++EM + + P+ ++ +IL+ G C+ +EEAL F + + D V Y I+I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
G CK + EA L+ S+ +G+ PD + YN+ SG
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPD------VQTYNVMISG 581
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 4/199 (2%)
Query: 10 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
+AL L ++ + ++PD++ Y+ II C +A LF ++ + PN T+ +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 70 DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
D FC GR DA + M+E+ +V+T++ LI K + A + +EM I
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
P+ V+Y+ +I G CK ++A + F D PDVVT+ +I YC+A R E MQL
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 190 YDSMLRNGIMPDGLLLSTL 208
+ R G++ + +TL
Sbjct: 455 LREISRRGLVANTTTYNTL 473
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A+ F + + N +I + +NR D A+ L+ K+ ++ N +F I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS------CLID---------GYFKSQN 112
LI FC ++ + F K+ + G + +VVT++ CL D GY
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 113 MKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
A ++++M E ++P +++++ LI+GLC G + EA + + L DVVTY
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++ G CK G A+ L M I PD ++ S + D
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 85/146 (58%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L+AA LF ++ G+ PD IT N ++ G+C +L+EA++LFE + ++ +++ +
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I CK ++D+A +F + G + +V TY+ +I G+ + A ++ +M +N
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 127 NISPNIVSYSILIDGLCKRGLMEEAL 152
P+ +Y+ LI G K G +++++
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSI 627
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D A LF L G+EPD+ TYN +I G+C + + +A LF K+ +P++
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
T+ LI K G +D + + S+M G + T + D
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 78 MDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSI 137
+DDA F M+ P V + +I + + A +Y +M I NI S++I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 138 LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
LI C + +L F PDVVT+ L+ G C R +EA+ L+ M+ G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 198 IMPDGLLLSTLADYNL 213
+ L + + L
Sbjct: 207 FLEAVALFDQMVEIGL 222
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 119/207 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE A KL + R ++PDI TYN++I G+C +RLD+A Q+FE + P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ LI FCK R++D T +F +M +G + VTY+ LI G F + +A V++
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + + P+I++YSIL+DGLC G +E+AL F + + D+ Y +I G CKAG
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + L+ S+ G+ P+ + +T+
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 115/207 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A L ++ +E D++ +NTII C +D+A+ LF+++ ++PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI C GR DA+ + S M+EK N+VT++ LID + K A +++
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + +I P+I +Y+ LI+G C +++A F + PD+ TY LI+G+CK+
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R + +L+ M G++ D + +TL
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTL 366
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 113/209 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ +G+ P+++TY+++I CS R +A QL + ++ PN
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG+ +A + M+++ ++ TY+ LI+G+ + A ++E
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + P++ +Y+ LI G CK +E+ F L+ D VTY LI+G G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A +++ M+ +G+ PD + S L D
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 115/207 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ + AL L G++ G EP I+T ++++ GYC R+ +AV L +++ + +P++I
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + N+VTY +++G K ++ AF++ +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I ++V ++ +ID LCK +++AL F + P+VVTY+ LI C GR
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A QL M+ I P+ + + L D
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALID 263
Score = 120 bits (300), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 3/199 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G PD IT+ T+I G N+ EAV L +++ +PN
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ ++++ CK G +D A + +KM +A+VV ++ +ID K +++ A ++++E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I PN+V+YS LI LC G +A ++ + P++VT+ LI + K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 183 PTEAMQLYDSMLRNGIMPD 201
EA +L+D M++ I PD
Sbjct: 271 FVEAEKLHDDMIKRSIDPD 289
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +P+++TY ++ G C +D A L K+ +++ + + F +ID
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK +DDA +F +M KG + NVVTYS LI A + +M E I+P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+V+++ LID K G EA + + PD+ TY LI G+C R +A Q++
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 191 DSMLRNGIMPD 201
+ M+ PD
Sbjct: 314 EFMVSKDCFPD 324
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 117/209 (55%), Gaps = 2/209 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++F + + PD+ TYNT+I G+C R+++ +LF +++ L +++T+T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI +G D+A +F +M+ G +++TYS L+DG + ++ A +V++ M ++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
I +I Y+ +I+G+CK G +++ + C+L + P+VVTY +I G C E
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDG-WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
A L M +G +PD +TL +L+
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +LF +++ RGL D +TY T+I G D A ++F+++ + P+ +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D C G+++ A +F M + K ++ Y+ +I+G K+ + +D++ +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ PN+V+Y+ +I GLC + L++EA ++ LPD TY LIR + + G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 184 TEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
+ +L M + D GL+ + L D L S
Sbjct: 517 AASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 553
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L ++ G+ ++ TYN +I +C +++ A+ L K+ + +P+ +T +
Sbjct: 26 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 85
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ +C R+ DA + +M+E G + + +T++ LI G F A + + M +
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
PN+V+Y ++++GLCKRG ++ A + + DVV + +I CK +A+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
L+ M GI P+ + L+S L Y S SQ
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P I +N ++ + + D + L EK+ + + N T+ ILI+ FC+ ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
KM++ G + ++VT S L++GY + + A + ++M E P+ ++++ LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
EA+ + P++VTY +++ G CK G A L + M I D ++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 205 LSTLAD 210
+T+ D
Sbjct: 188 FNTIID 193
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 88 MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
M++ P ++ ++ L+ K + + E+M IS N+ +Y+ILI+ C+R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
+ AL + P +VT + L+ GYC R ++A+ L D M+ G PD + +T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 208 L 208
L
Sbjct: 121 L 121
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 126/207 (60%), Gaps = 4/207 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+DAA+ LF ++ +G++ ++TYN+++ G C + ++ L + + ++ PN ITF +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+D F KEG++ +A ++ +M+ +G N++TY+ L+DGY + A ++ + M N
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
SP+IV+++ LI G C +++ + F L+ + VTY+IL++G+C++G+ A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 188 QLYDSMLRNGIMPD----GLLLSTLAD 210
+L+ M+ +G++PD G+LL L D
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCD 450
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 121/201 (60%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +KE L A +L+ ++ RG+ P+IITYNT++ GYC NRL EA + + + + P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +TFT LI +C R+DD +F + ++G AN VTYS L+ G+ +S +K A +++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+EM + + P++++Y IL+DGLC G +E+AL F + + +V Y +I G CK
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
G+ +A L+ S+ G+ P+
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPN 507
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 116/205 (56%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL L ++ +R ++ D+ TY+TII C +D A+ LF+++ +K + +T+ L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G+ +D ++ M+ + NV+T++ L+D + K ++ A ++Y+EM ISP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
NI++Y+ L+DG C + + EA + N PD+VT+ LI+GYC R + M+++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
++ + G++ + + S L QS
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQS 416
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 116/207 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L E + A+ L ++ + G +PD++TYN+I+ G C A+ L K+ +K +
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++ +ID+ C++G +D A +F +M KG K++VVTY+ L+ G K+ + +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M I PN++++++L+D K G ++EA + + + P+++TY L+ GYC
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R +EA + D M+RN PD + ++L
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSL 374
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 1/217 (0%)
Query: 6 CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
C A + G++ G EPD T+NT+I G ++ EAV L +++ +P+ +T+
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
+++ C+ G A + KM E+ KA+V TYS +ID + + +A +++EM
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
I ++V+Y+ L+ GLCK G + + ++P+V+T+ +L+ + K G+ E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD-YNLQSSGSQEH 221
A +LY M+ GI P+ + +TL D Y +Q+ S+ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 110/214 (51%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ L QL G+ +I T N +I +C + A + K+ + +P++ TF
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI EG++ +A ++ +M+E G + +VVTY+ +++G +S + A D+ +M E
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
N+ ++ +YS +ID LC+ G ++ A+ F + VVTY L+RG CKAG+ +
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
L M+ I+P+ + + L D ++ QE
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 110/204 (53%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D +K+F ++ RGL + +TY+ ++ G+C ++ A +LF+++ + P+ +T+
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
IL+D C G+++ A +F + + +V Y+ +I+G K ++ A++++ +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ PN+++Y+++I GLCK+G + EA ++ P+ TY LIR + + G T +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
+L + M G D + + D
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVID 586
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 75/136 (55%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ AL++F L ++ I+ Y TII G C ++++A LF L C +KPN +T+T
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
++I CK+G + +A ++ KM E G N TY+ LI + + ++ ++ + EEM
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572
Query: 127 NISPNIVSYSILIDGL 142
S + S ++ID L
Sbjct: 573 GFSADASSIKMVIDML 588
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF ++ P ++ ++ + + + ++L + N T I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ FC+ + A + K+++ G + + T++ LI G F + A + + M EN
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P++V+Y+ +++G+C+ G AL + ++ DV TY+ +I C+ G A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 189 LYDSMLRNGI 198
L+ M GI
Sbjct: 250 LFKEMETKGI 259
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 44 DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSC 102
D+A+ LF+++ + P+ + F+ A + + + + F K LE G N+ T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN-LVLDFCKQLELNGIAHNIYTLNI 128
Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH 162
+I+ + + A+ V ++ + P+ +++ LI GL G + EA+ ++N
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
PDVVTY ++ G C++G + A+ L M + D ST+ D
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ A LF L +G++P+++TY +I G C L EA L K+ PN
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
T+ LI A ++G + + + +M G A+ + +ID + KS D+
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ + G +PDI+ YN II C R+++A F+++ ++PN +T+T L++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C R DA + S M++K NV+TYS L+D + K+ + A +++EEM +I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+IV+YS LI+GLC ++EA F + L DVV+Y LI G+CKA R + M+L+
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 191 DSMLRNGIMPDGLLLSTL 208
M + G++ + + +TL
Sbjct: 354 REMSQRGLVSNTVTYNTL 371
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 124/207 (59%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K + A +LF ++ ++PDI+TY+++I G C +R+DEA Q+F+ + +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+++ LI+ FCK R++D +F +M ++G +N VTY+ LI G+F++ ++ A + +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M ISP+I +Y+IL+ GLC G +E+AL F + D+VTY +IRG CK G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ EA L+ S+ G+ PD + +T+
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 115/202 (56%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL + G++ G EPD +T +++ G+C NR+ +AV L +K+ + KP+ + +
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID+ CK R++DA F ++ KG + NVVTY+ L++G S A + +M +
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
I+PN+++YS L+D K G + EA F + + PD+VTY+ LI G C R EA
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
Q++D M+ G + D + +TL
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTL 336
Score = 123 bits (309), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 115/207 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
++K D + L ++ G+ D+ T+N +I +C ++ A+ + K+ + +P+
Sbjct: 95 IVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPD 154
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T L++ FC+ R+ DA + KM+E G K ++V Y+ +ID K++ + AFD ++
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
E+ I PN+V+Y+ L++GLC +A + + P+V+TY+ L+ + K G
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ EA +L++ M+R I PD + S+L
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSL 301
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A ++F + +G D+++YNT+I G+C R+++ ++LF +++ L N++T+
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI F + G +D A FS+M G ++ TY+ L+ G + ++ A ++E+M +
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCKAGRPTE 185
+ +IV+Y+ +I G+CK G +EEA ++ C+L L PD+VTY ++ G C G E
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEA-WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 186 AMQLYDSMLRNGIMPDGLLLS 206
LY M + G+M + LS
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS 509
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+++ L+ A+ LF + P I+ +N ++ L + D + L +K+ + ++ +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
TF I+I+ FC ++ A + KML+ G + + VT L++G+ + + A + ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M E P+IV+Y+ +ID LCK + +A F + P+VVTY L+ G C + R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L M++ I P+ + S L D
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +KLF +++ RGL + +TYNT+I G+ +D+A + F ++ + P+
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+ C G ++ A ++F M ++ ++VTY+ +I G K+ ++ A+ ++ +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 124 CENNISPNIVSYSILIDGLCKRGLME--EALYA 154
+ P+IV+Y+ ++ GLC +GL+ EALY
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ A LF L+ +GL+PDI+TY T++ G C+ L E L+ K+ L N
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Query: 64 TFT 66
T +
Sbjct: 507 TLS 509
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 122/208 (58%), Gaps = 3/208 (1%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +KE A+KL+ ++T R ++PD+ TYN++I G C R+DEA Q+ + + P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T+ LI+ FCK R+D+ T +F +M ++G + +TY+ +I GYF++ +A +++
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
M + PNI +YSIL+ GLC +E+AL F + + D+ TY I+I G CK
Sbjct: 373 SRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
G +A L+ S+ G+ PD + +T+
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 115/205 (56%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ + G PD++ YNTII G C + +++AV+LF+++ ++ +++T+ L+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C GR DA + M+ + NV+T++ +ID + K A +YEEM + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++ +Y+ LI+GLC G ++EA + LPDVVTY LI G+CK+ R E +L+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 191 DSMLRNGIMPDGLLLSTLADYNLQS 215
M + G++ D + +T+ Q+
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQA 362
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL + G++ G EPD++T +++I G+C NR+ +A+ L K+ + +P+ + + +ID
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G ++DA +F +M G +A+ VTY+ L+ G S A + +M +I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+++++ +ID K G EA+ + + PDV TY LI G C GR EA Q+
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 191 DSMLRNGIMPDGLLLSTLAD 210
D M+ G +PD + +TL +
Sbjct: 303 DLMVTKGCLPDVVTYNTLIN 322
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ A++LF ++ G+ D +TYN+++ G C R +A +L + + PN ITFT
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+ID F KEG+ +A ++ +M + +V TY+ LI+G + A + + M
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P++V+Y+ LI+G CK ++E F L+ D +TY +I+GY +AGRP A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 188 QLYDSM 193
+++ M
Sbjct: 370 EIFSRM 375
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+ K + D + LF + G+ D+ +YN +I C +R A+ + K+ +P+
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T + LI+ FC+ R+ DA + SKM E G + +VV Y+ +IDG K + A ++++
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + + + V+Y+ L+ GLC G +A + ++P+V+T+ +I + K G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ +EAM+LY+ M R + PD ++L +
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L+ + LF ++ P I+ ++ ++ D + LF + + + ++
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I+ C+ R A + KM++ G + +VVT S LI+G+ + + A D+ +M E
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
P++V Y+ +IDG CK GL+ +A+ F + + D VTY L+ G C +GR ++A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
+L M+ I+P+ + + + D
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVID 252
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ AL LF + +E DI TYN +I G C + +++A LF L+C LKP+ +++T
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKG 92
+I FC++ + D + +++ KM E G
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 35/136 (25%)
Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH----CALDNHLL- 164
S N++ D++ +M ++ P+IV +S ++ + K + + FH C + + L
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 165 ------------------------------PDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
PDVVT + LI G+C+ R +A+ L M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 195 RNGIMPDGLLLSTLAD 210
G PD ++ +T+ D
Sbjct: 167 EMGFRPDVVIYNTIID 182
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 113/199 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A +L ++ RG+ PD ITY ++I G+C N LD+A Q+ + + PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF ILI+ +CK R+DD +F KM +G A+ VTY+ LI G+ + + A ++++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + PNIV+Y IL+DGLC G E+AL F + + D+ Y I+I G C A
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 182 RPTEAMQLYDSMLRNGIMP 200
+ +A L+ S+ G+ P
Sbjct: 523 KVDDAWDLFCSLPLKGVKP 541
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 124/222 (55%), Gaps = 1/222 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K LD A LF ++ +G+ +IITYN +I G+C+ R D+ +L + ++ PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF++LID+F KEG++ +A + +M+ +G + +TY+ LIDG+ K ++ A + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M PNI +++ILI+G CK +++ L F ++ D VTY LI+G+C+ G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
+ A +L+ M+ + P+ + L D L +G E +
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLD-GLCDNGESEKAL 493
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 118/206 (57%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E + AL+L ++ + G +PD+IT NT++ G C + EA+ L +K+ +PN++T
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ +++ CK G+ A + KM E+ K + V YS +IDG K ++ +AF+++ EM
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
I+ NI++Y+ILI G C G ++ + + P+VVT+++LI + K G+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA +L+ M+ GI PD + ++L D
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLID 376
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A G++ G EP+ IT++T+I G C R+ EA++L +++ + KP+ IT L++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C G+ +A ++ KM+E G + N VTY +++ KS A ++ +M E NI
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+ V YSI+IDGLCK G ++ A F+ + +++TY ILI G+C AGR + +L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 191 DSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
M++ I P+ + S L D ++ +E
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D L+LF +++ RG+ D +TYNT+I G+C L +L+ A +LF+++ ++ PN +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+D C G + A +F K+ + + ++ Y+ +I G + + A+D++ +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ P + +Y+I+I GLCK+G + EA F ++ PD TY ILIR + G
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 184 TEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
T++++L + + R G D +++ L+D L+ S
Sbjct: 595 TKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKS 631
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 104/191 (54%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ + G +P+ +TY ++ C + A++L K+ +K +++ ++I+ID
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G +D+A +F++M KG N++TY+ LI G+ + + +M + I+P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+V++S+LID K G + EA + + PD +TY LI G+CK +A Q+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 191 DSMLRNGIMPD 201
D M+ G P+
Sbjct: 392 DLMVSKGCDPN 402
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
+ D+A+ LF + + P I F+ L A K + D + +M KG N+ T S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
+I+ + + + + AF ++ + PN +++S LI+GLC G + EAL ++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
PD++T L+ G C +G+ EAM L D M+ G P+ +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF + P +I ++ + + D + L +++ + N T +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ FC+ ++ A K+++ G + N +T+S LI+G + A ++ + M E
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P++++ + L++GLC G EA+ ++ P+ VTY ++ CK+G+ AM+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
L M I D + S + D
Sbjct: 250 LLRKMEERNIKLDAVKYSIIID 271
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A LF L +G++P + TYN +I G C L EA LF K+ P+ T+ I
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
LI A +G + + ++ G + T +ID + KS D+
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 3/207 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
KE L A KL ++ R ++PD ITYN +I G+C NRLDEA Q+F+ + PN
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ LI+ FCK R++D +F +M ++G N VTY+ +I G+F++ + SA V++
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M N + +I++YSIL+ GLC G ++ AL F + + ++ Y +I G CKAG
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ EA L+ S+ I PD + +T+
Sbjct: 518 KVGEAWDLFCSL---SIKPDVVTYNTM 541
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 118/207 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ ++ +++ +NTII C ++ AV LF ++ ++PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ C GR DA+ + S MLEK NVVT++ LID +FK + A ++E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +I P+ ++Y++LI+G C ++EA F + LP++ TY LI G+CK
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R + ++L+ M + G++ + + +T+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTI 439
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 116/207 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H++ A+ LF ++ +G+ P+++TYN++I C+ R +A +L + ++ PN
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG++ +A + +M+++ + +TY+ LI+G+ + A +++
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + PNI +Y+ LI+G CK +E+ + F L+ + VTY +I+G+ +AG
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
A ++ M+ N + D + S L
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 9/215 (4%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD T+ T+I G N+ EAV L +++ +P+
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +++ CK G +D A + +KM KANVV ++ +ID K ++++ A D++ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I PN+V+Y+ LI+ LC G +A L+ + P+VVT+ LI + K G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
EA +L++ M++ I PD + YNL +G
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTI------TYNLLING 372
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++F + + P+I TYNT+I G+C R+++ V+LF +++ L N++T+T
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG---------------YFKSQ 111
+I F + G D A M+F +M+ +++TYS L+ G Y +
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 112 NMKSAFDVYEEM-----------------CENNISPNIVSYSILIDGLCKRGLMEEALYA 154
M+ +Y M C +I P++V+Y+ +I GLC + L++EA
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 155 FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
F ++ LP+ TY LIR + + +L M +G + D +S + +
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 104/203 (51%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+ LFG + P I+ +N ++ +N+ + + L E++ + + + T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I+ FC+ ++ A + +KM++ G + ++VT S L++GY S+ + A + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P+ +++ LI GL EA+ + PD+VTY ++ G CK G A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
L + M I + ++ +T+ D
Sbjct: 244 NLLNKMEAARIKANVVIFNTIID 266
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+ + L Q+ G+ D+ TY+ I +C ++L A+ + K+ + +P+ +T +
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ +C R+ DA + +M+E G K + T++ LI G F A + ++M +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P++V+Y +++GLCKRG ++ AL + + +VV + +I CK A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
L+ M GI P+ + L++ L +Y S S+
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
++D+AV LF + + P+ + F L+ A K + + + +M G ++ TYS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
I+ + + + A V +M + P+IV+ S L++G C + +A+ ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
PD T+ LI G + +EA+ L D M++ G PD + T+ +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + AL + ++ GL P +ITY ++I C ++ A++ +++ L PN
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T L+D F ++G M++A + +M + G +VVTY+ LI+G+ + M+ A V E+M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
E +SP++VSYS ++ G C+ ++EAL ++ + PD +TY+ LI+G+C+ R
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA LY+ MLR G+ PD + L +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALIN 528
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 120/207 (57%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
++ +++ A ++ ++ D G P ++TYN +I G+C ++++A+ + E + L P+ +
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+++ ++ FC+ +D+A + +M+EKG K + +TYS LI G+ + + K A D+YEEM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ P+ +Y+ LI+ C G +E+AL + ++ +LPDVVTY++LI G K R
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA +L + +P + TL +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 15/207 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D AL++ ++ ++G++PD ITY+++I G+C R EA L+E++ V L P+ T+T
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-----YEE 122
LI+A+C EG ++ A + ++M+EKG +VVTYS LI+G K + A + YEE
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 123 MCENNIS--------PNIVSYSI--LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI 172
++++ NI S+ LI G C +G+M EA F L + PD Y I
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIM 199
+I G+C+AG +A LY M+++G +
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 119/221 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +E + + ++ RG D +TYNT+I GYC +A+ + ++ L P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT+T LI + CK G M+ A +M +G N TY+ L+DG+ + M A+ V
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM +N SP++V+Y+ LI+G C G ME+A+ + L PDVV+Y+ ++ G+C++
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
EA+++ M+ GI PD + S+L + ++E C
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Score = 130 bits (326), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 119/217 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +++ A++ Q+ RGL P+ TY T++ G+ ++EA ++ ++ P+ +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ C G+M+DA + M EKG +VV+YS ++ G+ +S ++ A V EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
E I P+ ++YS LI G C++ +EA + L L PD TY LI YC G
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
+A+QL++ M+ G++PD + S L + + S ++E
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 1/202 (0%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCVQLKPNSITFT 66
+D AL + G P +++YN ++ R + A +F+++ Q+ PN T+
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
ILI FC G +D A +F KM KG NVVTY+ LIDGY K + + F + M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ PN++SY+++I+GLC+ G M+E + D VTY LI+GYCK G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
+ ++ MLR+G+ P + ++L
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSL 351
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D KL + +GLEP++I+YN +I G C R+ E + ++ + +T+
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI +CKEG A +M ++ML G +V+TY+ LI K+ NM A + ++M
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ PN +Y+ L+DG ++G M EA DN P VVTY LI G+C G+ +A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
+ + M G+ PD + ST+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTV 456
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +F ++ + + P++ TYN +I G+C +D A+ LF+K+ PN +T+ LID
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+CK ++DD + M KG + N+++Y+ +I+G + MK V EM S
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+ V+Y+ LI G CK G +AL L + L P V+TY LI CKAG AM+
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 191 DSMLRNGIMPDGLLLSTLAD 210
D M G+ P+ +TL D
Sbjct: 369 DQMRVRGLCPNERTYTTLVD 388
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 15/214 (7%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E L+ AL+L ++ ++G+ PD++TY+ +I G +R EA +L KL + P+ +T
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 65 FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
+ LI+ FC +G M +A +F ML K K + Y+ +I G+ +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
+ +++ A+ +Y+EM ++ + V+ L+ L K G + E L + L +
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712
Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
+L+ + G + + M ++G +P+G+
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++F + + +PD YN +I G+C + +A L++++ +++T L+
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A KEG++++ + +L + L++ + NM DV EM ++ P
Sbjct: 684 ALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
Query: 131 NIVS 134
N +S
Sbjct: 744 NGIS 747
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 118/201 (58%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+ A+ L ++ +G D++TYNTI+ G C L EA +LF ++T L P+S T TI
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID CK G + +A +F KM EK + +VVTY+ L+DG+ K ++ +A +++ +M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I P +SYSIL++ LC +G + EA + + ++ P V+ +I+GYC++G ++
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
+ M+ G +PD + +TL
Sbjct: 606 SFLEKMISEGFVPDCISYNTL 626
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 110/207 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ ++ Q+ ++G+ PDI+TYNT+I Y S ++EA +L + P
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ +I+ CK G+ + A +F++ML G + TY L+ K ++ V+
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M ++ P++V +S ++ + G +++AL F+ + L+PD V Y ILI+GYC+ G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ AM L + ML+ G D + +T+
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTI 451
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K + A ++F ++ GL PD TY +++ C + E ++F + + P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F+ ++ F + G +D A M F+ + E G + V Y+ LI GY + + A ++
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + + ++V+Y+ ++ GLCKR ++ EA F+ + L PD T ILI G+CK G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
AM+L+ M I D + +TL D
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A +++ + + + P I+Y+ ++ CS L EA ++++++ +KP +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I +C+ G D KM+ +G + ++Y+ LI G+ + +NM AF + ++M E
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 128 --ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
+ P++ +Y+ ++ G C++ M+EA ++ + PD TY +I G+ TE
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 186 AMQLYDSMLRNGIMPD 201
A +++D ML+ G PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 110/198 (55%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
K+F + R + PD++ +++++ + LD+A+ F + L P+++ +TILI +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
C++G + A + ++ML++G +VVTY+ ++ G K + + A ++ EM E + P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
+ +ILIDG CK G ++ A+ F + + DVVTY L+ G+ K G A +++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 193 MLRNGIMPDGLLLSTLAD 210
M+ I+P + S L +
Sbjct: 541 MVSKEILPTPISYSILVN 558
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 111/208 (53%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ + +LD AL F + + GL PD + Y +I GYC + A+ L ++
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T+ ++ CK + +A +F++M E+ + T + LIDG+ K N+++A +++
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
++M E I ++V+Y+ L+DG K G ++ A + + +LP ++Y+IL+ C
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
G EA +++D M+ I P ++ +++
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSM 591
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ A +L + +G P + TYNT+I G C + + A ++F ++ L P+S T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ CK+G + + +FS M + ++V +S ++ + +S N+ A + + E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ P+ V Y+ILI G C++G++ A+ + L DVVTY ++ G CK EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
+L++ M + PD L+ L D
Sbjct: 466 KLFNEMTERALFPDSYTLTILID 488
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L A KLF ++T+R L PD T +I G+C L L A++LF+K+ +++ +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ L+D F K G +D A +++ M+ K ++YS L++ ++ AF V++
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM NI P ++ + +I G C+ G + + +PD ++Y LI G+ +
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 182 RPTEAMQLYDSM--LRNGIMPD 201
++A L M + G++PD
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPD 656
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
++ L A + F L +G I N +I + ++ A ++++++ + N
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T I+++A CK+G+M+ S++ EKG ++VTY+ LI Y M+ AF++
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M SP + +Y+ +I+GLCK G E A F L + L PD TY L+ CK G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
E +++ M ++PD + S++
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSM 381
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N F +LI + + ++ +A F+ + KG ++ + LI + ++ A+ VY
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+E+ + + N+ + +I+++ LCK G ME+ + + PD+VTY LI Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 181 GRPTEAMQLYDSMLRNGIMP 200
G EA +L ++M G P
Sbjct: 284 GLMEEAFELMNAMPGKGFSP 303
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +C + A +L GQ+ ++GL P++ITYN +I GYC +++AV + E + +L PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ T+ LI +CK + A + +KMLE+ +VVTY+ LIDG +S N SA+ +
Sbjct: 428 TRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + + P+ +Y+ +ID LCK +EEA F + P+VV Y LI GYCKAG
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ EA + + ML +P+ L + L
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 119/216 (55%), Gaps = 1/216 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A+ LF ++ D P + TY +I C R EA+ L +++ +KPN T+T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+LID+ C + + + A + +MLEKG NV+TY+ LI+GY K ++ A DV E M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+SPN +Y+ LI G CK + +A+ + L+ +LPDVVTY LI G C++G A
Sbjct: 423 KLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
+L M G++PD +++ D +S +E C
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 107/202 (52%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ D+A +L + DRGL PD TY ++I C R++EA LF+ L + PN + +T
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LID +CK G++D+A +M KML K N +T++ LI G +K A + E+M +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ P + + +ILI L K G + A F L + PD TY I+ YC+ GR +A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
+ M NG+ PD S+L
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSL 678
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD+A K+F ++ +G + + Y +I G C R+DEA+ LF K+ + P T+T+
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI + C R +A + +M E G K N+ TY+ LID + A ++ +M E
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ PN+++Y+ LI+G CKRG++E+A+ L P+ TY LI+GYCK+ +AM
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQS 215
+ + ML ++PD + ++L D +S
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ A + ++ + GL+PD TY ++I GYC LD A ++F ++ + N + +T
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI C R+D+A +F KM + V TY+ LI S+ A ++ +EM E
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
I PNI +Y++LID LC + E+A L+ L+P+V+TY LI GYCK G +A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 187 MQLYDSMLRNGIMPD 201
+ + + M + P+
Sbjct: 413 VDVVELMESRKLSPN 427
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A+ + ++ +R + PD++TYN++I G C D A +L + L P+ T+T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID+ CK R+++A +F + +KG NVV Y+ LIDGY K+ + A + E+M
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
N PN ++++ LI GLC G ++EA + L P V T ILI K G A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
+ ML +G PD +T
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTF 643
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ A LF L +G+ P+++ Y +I GYC ++DEA + EK+ PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
S+TF LI C +G++ +AT++ KM++ G + V T + LI K + A+ ++
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + P+ +Y+ I C+ G + +A +N + PD+ TY+ LI+GY G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 182 RPTEAMQLYDSMLRNGIMP 200
+ A + M G P
Sbjct: 687 QTNFAFDVLKRMRDTGCEP 705
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%)
Query: 30 YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
YNT++ +DE Q++ ++ ++ PN T+ +++ +CK G +++A SK++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 90 EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLME 149
E G + TY+ LI GY + +++ SAF V+ EM N V+Y+ LI GLC ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 150 EALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
EA+ F D+ P V TY +LI+ C + R +EA+ L M GI P+ + L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 210 D 210
D
Sbjct: 366 D 366
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L A L ++ GL+P + T +I D A F+++ KP++ T+T
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I +C+EGR+ DA M +KM E G ++ TYS LI GY AFDV + M +
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 128 ISPNIVSYSILIDG---------------LCKRGLMEE---ALYAFHCALDNHLLPDVVT 169
P+ ++ LI LC M E + +++ + P+ +
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRN-GIMPDGLLLSTL 208
Y LI G C+ G A +++D M RN GI P L+ + L
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K+ D A F Q+ G +PD TY T I YC RL +A + K+ + P+
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID-----GYFKSQ----- 111
T++ LI + G+ + A + +M + G + + T+ LI Y K +
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 112 -----NM---KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF-HCALDNH 162
NM + ++ E+M E++++PN SY LI G+C+ G + A F H +
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 163 LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
+ P + + L+ CK + EA ++ D M+ G +P
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPNSITF 65
D ++L ++ + + P+ +Y +I G C + L A ++F+ + + + P+ + F
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
L+ CK + ++A + M+ G + + LI G +K + V++ + +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
+ +++ I+IDG+ K+GL+E F+ N TY++LI G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTII------------------CGYCSLNRLDEAVQLFEK 52
A + ++ D G EP T+ ++I C ++ D V+L EK
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 53 LTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQ 111
+ + PN+ ++ LI C+ G + A +F M +G + + ++ L+ K +
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 112 NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
A V ++M P + S +LI GL K+G E F L D + +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNG 197
I+I G K G +L++ M +NG
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNG 896
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 114/200 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A +L ++ RG+ PD +TY ++I G+C N+LD+A + + + PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF ILI+ +CK +DD +F KM +G A+ VTY+ LI G+ + ++ A ++++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + P+IVSY IL+DGLC G E+AL F + + D+ Y I+I G C A
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+ +A L+ S+ G+ PD
Sbjct: 507 KVDDAWDLFCSLPLKGVKPD 526
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 113/200 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ LD A LF ++ +G + DII Y T+I G+C R D+ +L + ++ P+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F+ LID F KEG++ +A + +M+++G + VTY+ LIDG+ K + A + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M PNI +++ILI+G CK L+++ L F ++ D VTY LI+G+C+ G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+ A +L+ M+ + PD
Sbjct: 437 KLEVAKELFQEMVSRRVRPD 456
Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L A G++ G EPD +T++T+I G C R+ EA++L +++ + KP IT
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L++ C G++ DA ++ +M+E G + N VTY ++ KS A ++ +M E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
I + V YSI+IDGLCK G ++ A F+ D++ Y LIRG+C AGR +
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
+L M++ I PD + S L D
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALID 325
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 110/198 (55%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A++L ++ +R ++ D + Y+ II G C LD A LF ++ K + I +T LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC GR DD + M+++ +VV +S LID + K ++ A ++++EM + ISP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+ V+Y+ LIDG CK +++A + + P++ T+ ILI GYCKA + ++L+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 191 DSMLRNGIMPDGLLLSTL 208
M G++ D + +TL
Sbjct: 411 RKMSLRGVVADTVTYNTL 428
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D L+LF +++ RG+ D +TYNT+I G+C L +L+ A +LF+++ +++P+ +++ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+D C G + A +F K+ + + ++ Y+ +I G + + A+D++ +
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ P++ +Y+I+I GLCK+G + EA F ++ P+ TY ILIR + G T++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 188 QLYDSMLRNGIMPDG----LLLSTLADYNLQSS 216
+L + + R G D +++ L+D L+ S
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKS 615
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E + AL+L ++ + G +P +IT N ++ G C ++ +AV L +++ +PN +T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ ++ CK G+ A + KM E+ K + V YS +IDG K ++ +AF+++ EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
+I+ Y+ LI G C G ++ + + PDVV ++ LI + K G+
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA +L+ M++ GI PD + ++L D
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLID 360
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D L L Q+ +G+ ++ T + +I C +L A K+ + +P+++TF+ L
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ C EGR+ +A + +M+E G K ++T + L++G + + A + + M E
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
PN V+Y ++ +CK G A+ + + D V Y+I+I G CK G A
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 189 LYDSMLRNGIMPDGLLLSTL 208
L++ M G D ++ +TL
Sbjct: 269 LFNEMEIKGFKADIIIYTTL 288
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 98/202 (48%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF ++T P +I ++ + + D + L +++ + N T +I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ C+ ++ A K+++ G + + VT+S LI+G + A ++ + M E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P +++ + L++GLC G + +A+ ++ P+ VTY +++ CK+G+ AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 189 LYDSMLRNGIMPDGLLLSTLAD 210
L M I D + S + D
Sbjct: 234 LLRKMEERKIKLDAVKYSIIID 255
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A LF L +G++PD+ TYN +I G C L EA LF K+ PN T+
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
ILI A EG + + ++ G + T ++D + KS D+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 128/214 (59%), Gaps = 1/214 (0%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE +++ AL L ++T G+EP+IIT++T+I GYC++ + A+ L+ ++T + P+ +
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T LIDA KE M +A ++S MLE G N T++CL+DG++K + A D Y+E
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ N V ++ LI+GLC+ G + A F + PD+ +Y +++G+ + R
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
T+ M L M++ GI+P+ L+ LA + Q++G
Sbjct: 601 TDTMMLQCDMIKTGILPNLLVNQLLARF-YQANG 633
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L ++ ++ A K+F + G+ P++ TY+ +I GYC + +A L++++ +L PN
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F L+D FCK + A +F M++ G N+ Y+CLI G+ KS NM A +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM N+SP++ +Y+ILI+GLC + EA F + + P TY LI GYCK
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+A+ L M +G+ P+ + STL D
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLID 452
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 111/207 (53%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L A LF + G++P++ YN +I G+C + EAV L ++ + L P+
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+TILI+ C E ++ +A +F KM + + TY+ LI GY K NM+ A D+ EM
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ + PNI+++S LIDG C ++ A+ + ++PDVVTY LI + K
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA++LY ML GI P+ + L D
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVD 522
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 106/181 (58%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ L PD+ TY +I G C +++ EA +LF+K+ ++ P+S T+ LI
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+CKE M+ A + S+M G + N++T+S LIDGY +++K+A +Y EM I P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++V+Y+ LID K M+EAL + L+ + P+ T+A L+ G+ K GR + A+ Y
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 191 D 191
Sbjct: 538 Q 538
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
KL ++T G++P++ Y I C N+++EA ++FE + + PN T++ +ID +
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
CK G + A ++ ++L NVV + L+DG+ K++ + +A ++ M + + PN+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
Y+ LI G CK G M EA+ +L PDV TY ILI G C + EA +L+
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 193 MLRNGIMPDGLLLSTL-----ADYNLQSS 216
M I P ++L +YN++ +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 13 KLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
+LF L D + + I ++ +I + + +EA+ + ++ C P+S +++
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNG 173
Query: 72 FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
+ R D + + M+ +G +V Y L FK + +EM I PN
Sbjct: 174 LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPN 233
Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
+ Y+I I LC+ MEEA F + +LP++ TY+ +I GYCK G +A LY
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
Query: 192 SMLRNGIMPDGLLLSTLAD 210
+L ++P+ ++ TL D
Sbjct: 294 EILVAELLPNVVVFGTLVD 312
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
PD +I+ G R D ++ + L P+ + +L K+G +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
+M G K NV Y+ I + M+ A ++E M ++ + PN+ +YS +IDG CK
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
G + +A + L LLP+VV + L+ G+CKA A L+ M++ G+ P+
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 113/200 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +E L+ A K+ Q+ G+ P++ITYNT+I G+C + +L +A+ L L L P+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ IL+ FC++G A M +M E+G K + VTY+ LID + +S NM+ A +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M E + P++ +YS+LI G C +G M EA F ++ + P+ V Y +I GYCK G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
A++L M + P+
Sbjct: 493 SSYRALKLLKEMEEKELAPN 512
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 120/207 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ A ++F ++ +RG+ +I+TYNT+I G C +L+EA ++ +++ + PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT+ LID FC G++ A + + +G ++VTY+ L+ G+ + + A + +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM E I P+ V+Y+ILID + ME+A+ + L+PDV TY++LI G+C G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ EA +L+ SM+ P+ ++ +T+
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTM 484
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 10/221 (4%)
Query: 1 MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
+LIK C ++ + L +LT+ G P+++ Y T+I G C +++A LF ++ +
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 57 QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
L N T+T+LI+ K G M+ KM E G N+ TY+C+++ K K A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
F V++EM E +S NIV+Y+ LI GLC+ + EA + + P+++TY LI G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 177 YCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
+C G+ +A+ L + G+ P +L YN+ SG
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSP------SLVTYNILVSG 382
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 104/202 (51%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L AL L L RGL P ++TYN ++ G+C A ++ +++ +KP+ +T+TI
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID F + M+ A + M E G +V TYS LI G+ M A +++ M E N
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
PN V Y+ +I G CK G AL + L P+V +Y +I CK + EA
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 188 QLYDSMLRNGIMPDGLLLSTLA 209
+L + M+ +GI P +LS ++
Sbjct: 534 RLVEKMIDSGIDPSTSILSLIS 555
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 106/185 (57%)
Query: 26 DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
D+ ++ +I G C ++++ L +LT PN + +T LID CK+G ++ A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 86 SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
+M + G AN TY+ LI+G FK+ K F++YE+M E+ + PN+ +Y+ +++ LCK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 146 GLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLL 205
G ++A F + + ++VTY LI G C+ + EA ++ D M +GI P+ +
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 206 STLAD 210
+TL D
Sbjct: 342 NTLID 346
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 94/167 (56%)
Query: 10 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
A K+ ++ +RG++P +TY +I + + +++A+QL + + L P+ T+++LI
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 70 DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
FC +G+M++A+ +F M+EK + N V Y+ +I GY K + A + +EM E ++
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
PN+ SY +I+ LCK +EA +D+ + P +++ R
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 73/132 (55%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ A++L + + GL PD+ TY+ +I G+C +++EA +LF+ + +PN + +
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+I +CKEG A + +M EK NV +Y +I+ K + K A + E+M ++
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 127 NISPNIVSYSIL 138
I P+ S++
Sbjct: 543 GIDPSTSILSLI 554
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 119/210 (56%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+L + C L A + F ++ +G+ PD + Y T+I G+C + A + F ++ + P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T+T +I FC+ G M +A +F +M KG + + VT++ LI+GY K+ +MK AF V+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
M + SPN+V+Y+ LIDGLCK G ++ A H L P++ TY ++ G CK+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
G EA++L G+ D + +TL D
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Score = 137 bits (345), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 5/208 (2%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
IKE H L L +L +G PD+I+Y+T++ GYC LD+ +L E + LKPNS
Sbjct: 262 IKEAH---HLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+ +I C+ ++ +A FS+M+ +G + V Y+ LIDG+ K ++++A + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M +I+P++++Y+ +I G C+ G M EA FH L PD VT+ LI GYCKAG
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+A ++++ M++ G P+ + +TL D
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +++ A+KL G+ GL D +TY T++ YC +D+A ++ +++ L+P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF +L++ FC G ++D + + ML KG N T++ L+ Y N+K+A +Y+
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+MC + P+ +Y L+ G CK M+EA + F V TY++LI+G+ K
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ EA +++D M R G+ D + +D
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A KLF ++ +GLEPD +T+ +I GYC + +A ++ + PN +T+T LID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CKEG +D A + +M + G + N+ TY+ +++G KS N++ A + E ++
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+ V+Y+ L+D CK G M++A L L P +VT+ +L+ G+C G + +L
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 191 DSMLRNGIMPDGLLLSTLA 209
+ ML GI P+ ++L
Sbjct: 585 NWMLAKGIAPNATTFNSLV 603
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K H+ A ++ + G P+++TY T+I G C LD A +L ++ + L+PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +++ CK G +++A + + G A+ VTY+ L+D Y KS M A ++ +EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ P IV++++L++G C G++E+ + L + P+ T+ L++ YC
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
A +Y M G+ PDG L + ++ +E
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 2 LIKECHLDA-ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
L K+C+ A A+ +F + + G+ ++ +YN +I C L R+ EA L + P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ I+++ +++ +C+ G +D + M KG K N Y +I + + A + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
EM I P+ V Y+ LIDG CKRG + A F+ + PDV+TY +I G+C+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
G EA +L+ M G+ PD + + L
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 20 DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE-GRM 78
D G +P + ++ L EA ++FEK+ L + + + + K+ +
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 79 DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
A ++F + E G NV +Y+ +I + +K A + M +P+++SYS +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
++G C+ G +++ L P+ Y +I C+ + EA + + M+R GI
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 199 MPDGLLLSTLAD 210
+PD ++ +TL D
Sbjct: 348 LPDTVVYTTLID 359
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L AA ++ + RG+ PD TY ++ G+C + EA LF+++ + T++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+LI F K + +A +F +M +G A+ + D +K + + D +E+ EN
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + + KLF + G++P++ITYNT+I GYC ++DEA++L + V LKPN++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++ LI+ +CK RM+DA ++F +M G +++TY+ ++ G F+++ +A ++Y +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAG 181
E+ + +Y+I++ GLCK L ++AL F C +D L + T+ I+I K G
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL--EARTFNIMIDALLKVG 665
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
R EA L+ + NG++P+
Sbjct: 666 RNDEAKDLFVAFSSNGLVPN 685
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 9/223 (4%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+L K ++ A+ F Q+ D GL P I YN++I G C+ N+ + A +L ++ +
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N+I F +ID+ CKEGR+ ++ +F M+ G K NV+TY+ LI+GY + M A +
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
M + PN V+YS LI+G CK ME+AL F + + PD++TY I+++G +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 181 GRPTEAMQLYDSMLRNG---------IMPDGLLLSTLADYNLQ 214
R A +LY + +G I+ GL + L D LQ
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 113/207 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A+++ + G+ PD +TYN+I+ GYCS + EA+ +K+ ++P+
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+++L+D CK GR +A +F M ++G K + TY L+ GY + + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M N I P+ +SILI K+G +++A+ F L P+ VTY +I CK+G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
R +AM ++ M+ G+ P ++ ++L
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQL-FEKLTCVQLKPNSITF 65
LD G + +G D I + ++ G C+ R +A+ + ++T + PN ++
Sbjct: 102 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSY 161
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEK---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
IL+ C E R +A + M + G +VV+Y+ +I+G+FK + A+ Y E
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M + I P++V+Y+ +I LCK M++A+ + + N ++PD +TY ++ GYC +G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLADY 211
P EA+ M +G+ PD + S L DY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 37/234 (15%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A K+F +T RGL+P+I TY T++ GY + L E L + + + P+ F+ILI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A+ K+G++D A ++FSKM ++G N VTY +I KS ++ A +E+M + +SP
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 131 NIVSYSILIDGLCK----------------RGLMEEALYAFHCALDNH------------ 162
+ Y+ LI GLC RG+ ++ F+ +D+H
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKL 498
Query: 163 --------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ P+V+TY LI GYC AG+ EAM+L M+ G+ P+ + STL
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 109/198 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ +D A+ +F ++ +GL P+ +TY +I C R+++A+ FE++ L P +I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+ LI C + + A + +ML++G N + ++ +ID + K + + ++E M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ PN+++Y+ LI+G C G M+EA+ + L P+ VTY+ LI GYCK R
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 184 TEAMQLYDSMLRNGIMPD 201
+A+ L+ M +G+ PD
Sbjct: 563 EDALVLFKEMESSGVSPD 580
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 3/201 (1%)
Query: 11 ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
AL+L + D G PD+++Y T+I G+ D+A + ++ + P+ +T+
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I A CK MD A + + M++ G + +TY+ ++ GY S K A ++M +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ P++V+YS+L+D LCK G EA F L P++ TY L++GY G E
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
L D M+RNGI PD + S L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSIL 377
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 111/207 (53%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+KL + GL+P+ +TY+T+I GYC ++R+++A+ LF+++ + P+ IT+ I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
++ + R A ++ ++ E G + + TY+ ++ G K++ A +++ +C +
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ +++I+ID L K G +EA F N L+P+ TY ++ G E
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQ 214
QL+ SM NG D +L+ + LQ
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV---QLKPNSITFTI 67
A +F +L RG I N + + + AV + ++ ++ P+ T+ I
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALAD-VARDSPAAAVSRYNRMARAGADEVTPDLCTYGI 92
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD-VYEEMCEN 126
LI C+ GR+D +++KG + + + ++ L+ G + A D V M E
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH---LLPDVVTYAILIRGYCKAGRP 183
PN+ SY+IL+ GLC +EAL H D+ PDVV+Y +I G+ K G
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 184 TEAMQLYDSMLRNGIMPD 201
+A Y ML GI+PD
Sbjct: 213 DKAYSTYHEMLDRGILPD 230
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ AL LF ++ G+ PDIITYN I+ G R A +L+ ++T +
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ I++ CK DDA MF + K T++ +ID K A D++
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
N + PN +Y ++ + + +GL+EE F DN D ++R + G
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Query: 184 TEA 186
T A
Sbjct: 738 TRA 740
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 79 DDATMMFSKMLEKGPKANVVTYS-CLIDGYFKSQNMKSAFDVYEEMCE---NNISPNIVS 134
+DA +F ++L +G A++ + L D + +A Y M + ++P++ +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALAD--VARDSPAAAVSRYNRMARAGADEVTPDLCT 89
Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY-DSM 193
Y ILI C+ G ++ A + D + + L++G C R ++AM + M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 194 LRNGIMPD----GLLLSTLADYN 212
G +P+ +LL L D N
Sbjct: 150 TELGCIPNVFSYNILLKGLCDEN 172
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 116/207 (56%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L ALK F + L P+++T+ +I GYC L+ AV L++++ V++ N +
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T LID FCK+G M A M+S+M+E + N + Y+ +IDG+F+ + +A +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ +I +Y ++I GLC G ++EA + L+PD+V + ++ Y K+GR
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A+ +Y ++ G PD + LST+ D
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMID 381
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 108/191 (56%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P+++TY+T I +C L A++ F + L PN +TFT LID +CK G ++ A +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
+ +M NVVTY+ LIDG+ K M+ A ++Y M E+ + PN + Y+ +IDG +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
RG + A+ L+ + D+ Y ++I G C G+ EA ++ + M ++ ++PD ++
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 205 LSTLADYNLQS 215
+T+ + +S
Sbjct: 341 FTTMMNAYFKS 351
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 5/197 (2%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
K + AA+ ++ +L +RG EPD++ +T+I G +L EA+ F C++ K N
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIE-KAND 403
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+ +T+LIDA CKEG + +FSK+ E G + Y+ I G K N+ AF +
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M + + ++++Y+ LI GL +GLM EA F L++ + PD + +LIR Y K G
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Query: 183 PTEAMQLYDSMLRNGIM 199
A L M R G++
Sbjct: 524 MAAASDLLLDMQRRGLV 540
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 22 GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITFTILIDAFCKEGRM 78
G EPD+I+YN++I G+C + A + E L KP+ ++F L + F K +
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145
Query: 79 DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSIL 138
D+ + ML K NVVTYS ID + KS ++ A + M + +SPN+V+++ L
Sbjct: 146 DEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 139 IDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
IDG CK G +E A+ + + +VVTY LI G+CK G A ++Y M+ + +
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 199 MPDGLLLSTLADYNLQSSGS 218
P+ L+ +T+ D Q S
Sbjct: 265 EPNSLVYTTIIDGFFQRGDS 284
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+K ++ ++G+ DI Y II G C +L EA ++ E + L P+ + FT +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF----------- 117
++A+ K GRM A M+ K++E+G + +VV S +IDG K+ + A
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV 404
Query: 118 -------------------DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCA 158
++ ++ E + P+ Y+ I GLCK+G + +A
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 159 LDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ LL D++ Y LI G G EA Q++D ML +GI PD + L
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 40/239 (16%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L+ A+ L+ ++ + +++TY +I G+C + A +++ ++ +++PNS+
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG----------------- 106
+T +ID F + G D+A +KML +G + ++ Y +I G
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 107 ------------------YFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
YFKS MK+A ++Y ++ E P++V+ S +IDG+ K G +
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLST 207
EA+ F N V Y +LI CK G E +L+ + G++PD + ++
Sbjct: 390 HEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
+LK L RG P ++N+++ C L ++ A + + +P+ I++ LID
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 71 AFCKEGRMDDATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
C+ G + A+++ + K ++V+++ L +G+ K + + F VY +
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKC 158
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
SPN+V+YS ID CK G ++ AL +FH + L P+VVT+ LI GYCKAG A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 188 QLYDSMLR 195
LY M R
Sbjct: 219 SLYKEMRR 226
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE +LF ++++ GL PD Y + I G C L +A +L ++ L +
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T LI +G M +A +F +ML G + + LI Y K NM +A D+
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 122 EM 123
+M
Sbjct: 533 DM 534
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ +L A KL ++ GL D++ Y T+I G S + EA Q+F+++ + P+
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
S F +LI A+ KEG M A+ + M +G V C
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 118/206 (57%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE ++ A K+F ++T R L+P ++++NT+I GYC + LDE +L ++ + +P+
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++ LI+A CKE +MD A +F +M ++G N V ++ LI G+ ++ + + Y++M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ P+IV Y+ L++G CK G + A + L PD +TY LI G+C+ G
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLA 209
A+++ M +NGI D + S L
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALV 457
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ +D + + ++ +GL+PDI+ YNT++ G+C L A + + + L+P+ I
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T LID FC+ G ++ A + +M + G + + V +S L+ G K + A EM
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I P+ V+Y++++D CK+G + + +P VVTY +L+ G CK G+
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
A L D+ML G++PD + +TL + + + + S + I
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI 576
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 106/197 (53%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
+ ++ D G ++ +N ++ +C + +A ++F+++T L+P ++F LI+ +C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
K G +D+ + +M + + +V TYS LI+ K M A +++EMC+ + PN V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
++ LI G + G ++ ++ L L PD+V Y L+ G+CK G A + D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 194 LRNGIMPDGLLLSTLAD 210
+R G+ PD + +TL D
Sbjct: 407 IRRGLRPDKITYTTLID 423
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 110/199 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE +D A LF ++ RGL P+ + + T+I G+ +D + ++K+ L+P+
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + L++ FCK G + A + M+ +G + + +TY+ LIDG+ + ++++A ++ +
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM +N I + V +S L+ G+CK G + +A A L + PD VTY +++ +CK G
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 182 RPTEAMQLYDSMLRNGIMP 200
+L M +G +P
Sbjct: 500 DAQTGFKLLKEMQSDGHVP 518
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + A + ++ G++PD +TY ++ +C +L +++ P+ +
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +L++ CK G+M +A M+ ML G + +TY+ L++G+ + N Y +
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR---YIQK 578
Query: 124 CENNISPNIVSYSILIDGL 142
E I ++ SY +++ L
Sbjct: 579 PEIGIVADLASYKSIVNEL 597
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 112/195 (57%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
G++ G EPD++T+ +++ GYC NR+++A+ LF+++ + KPN +T+T LI C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
K ++ A +F++M G + NVVTY+ L+ G + A + +M + I PN++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
+++ LID K G + EA ++ + + PDV TY LI G C G EA Q++ M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 194 LRNGIMPDGLLLSTL 208
RNG P+ ++ +TL
Sbjct: 320 ERNGCYPNEVIYTTL 334
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 3/206 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH ++ A+ LF Q+ G +P+++TY T+I C L+ AV+LF ++ +PN
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ L+ C+ GR DA + M+++ + NV+T++ LID + K + A ++Y
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M + ++ P++ +Y LI+GLC GL++EA F+ N P+ V Y LI G+CK+ R
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ M+++ M + G++ + + + L
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVL 369
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K HL+ A++LF Q+ G P+++TYN ++ G C + R +A L + +++PN
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
ITFT LIDAF K G++ +A +++ M++ +V TY LI+G + A ++
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M N PN V Y+ LI G CK +E+ + F+ ++ + +TY +LI+GYC G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
RP A ++++ M PD + L D
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K L A +L+ + + PD+ TY ++I G C LDEA Q+F + PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T LI FCK R++D +F +M +KG AN +TY+ LI GY A +V+
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M P+I +Y++L+DGLC G +E+AL F + ++VTY I+I+G CK G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ +A L+ S+ G+ P+ + +T+
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTM 474
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 113/194 (58%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A ++F + G P+ + Y T+I G+C R+++ +++F +++ + N+IT+T+
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI +C GR D A +F++M + ++ TY+ L+DG + ++ A ++E M +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ NIV+Y+I+I G+CK G +E+A F + P+V+TY +I G+C+ G EA
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 188 QLYDSMLRNGIMPD 201
L+ M +G +P+
Sbjct: 489 SLFKKMKEDGFLPN 502
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 4/215 (1%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D + LF Q+ G+ P + T N ++ C ++ A K+ + +P+ +TFT L
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
++ +C R++DA +F ++L G K NVVTY+ LI K++++ A +++ +M N
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
PN+V+Y+ L+ GLC+ G +A + + + P+V+T+ LI + K G+ EA +
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279
Query: 189 LYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 219
LY+ M++ + PD G L++ L Y L Q
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 97/167 (58%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +K+F +++ +G+ + ITY +I GYC + R D A ++F +++ + P+
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +L+D C G+++ A M+F M ++ N+VTY+ +I G K ++ AFD++ +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTY 170
+ PN+++Y+ +I G C+RGL+ EA F ++ LP+ Y
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL LF ++ P II + ++ +NR D + LFE++ + + P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I++ C + A+ KM++ G + ++VT++ L++GY ++ A +++++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
PN+V+Y+ LI LCK + A+ F+ N P+VVTY L+ G C+ GR +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
L M++ I P+ + + L D
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALID 266
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 111/209 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ L KL + +G P+ +TYNT+I G C +LD+AV L E++ + PN
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ K+ R DA + S M E+G N YS LI G FK + A ++
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M E PNIV YS+L+DGLC+ G EA + + + LP+ TY+ L++G+ K G
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
EA+Q++ M + G + S L D
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 108/193 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K+ A++L + +RG + Y+ +I G + +EA+ L+ K+ KPN
Sbjct: 337 LVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +++L+D C+EG+ ++A + ++M+ G N TYS L+ G+FK+ + A V++
Sbjct: 397 IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK 456
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + S N YS+LIDGLC G ++EA+ + L + PD V Y+ +I+G C G
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Query: 182 RPTEAMQLYDSML 194
A++LY ML
Sbjct: 517 SMDAALKLYHEML 529
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 3/220 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE + A+ L+ ++ ++G +P+I+ Y+ ++ G C + +EA ++ ++ PN
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ T++ L+ F K G ++A ++ +M + G N YS LIDG +K A V+
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFH---CALDNHLLPDVVTYAILIRGYC 178
+M I P+ V+YS +I GLC G M+ AL +H C + PDVVTY IL+ G C
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 218
+ A+ L +SML G PD + +T + + S S
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE +D A+ L ++ G P + YN +I G C L +L + + PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI C +G++D A + +M+ N VTY LI+G K + A +
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M E N YS+LI GL K G EEA+ + + P++V Y++L+ G C+ G
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+P EA ++ + M+ +G +P+ S+L
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSL 438
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 95/175 (54%)
Query: 23 LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
+ P+ +++N +I C L +D A+++F + + P+ T+ L+D CKE R+D+A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 83 MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
++ +M +G + V Y+ LIDG K ++ + + M PN V+Y+ LI GL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNG 197
C +G +++A+ + + +P+ VTY LI G K R T+A++L SM G
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 6/212 (2%)
Query: 5 ECHL-DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC----VQL 58
+ HL D A+ LF ++ D + + ++N+++ + ++ ++ + + +
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 183
Query: 59 KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
PN ++F ++I A CK +D A +F M E+ + TY L+DG K + + A
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
+ +EM SP+ V Y++LIDGLCK+G + +P+ VTY LI G C
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
G+ +A+ L + M+ + +P+ + TL +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 22/194 (11%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSI 63
+ A+ ++ ++ G++PD + Y++II G C + +D A++L+ ++ C + +P+ +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYF-KSQNMKSAFDVYEE 122
T+ IL+D C + + A + + ML++G +V+T + ++ KS + EE
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
L+ L KR + A L +L P T+A+++R CK +
Sbjct: 602 ---------------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
Query: 183 PTEAMQLYDSMLRN 196
A+ D RN
Sbjct: 647 INAAI---DKCWRN 657
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Query: 29 TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
T +++I Y + D +L ++ +F ++ A+ K D A +F +M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 89 LEKGP-KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN----ISPNIVSYSILIDGLC 143
+++ K +V +++ +++ + Y+ + +N ISPN +S++++I LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
K ++ A+ F + LPD TY L+ G CK R EA+ L D M G P +
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 204 LLSTLAD 210
+ + L D
Sbjct: 259 IYNVLID 265
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 119/209 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+ A+++ + G +PD+ TYN++I G C L + EAV++ +++ PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++T+ LI CKE ++++AT + + KG +V T++ LI G ++N + A +++E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM P+ +Y++LID LC +G ++EAL + V+TY LI G+CKA
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ EA +++D M +G+ + + +TL D
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 117/207 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE ++ A +L LT +G+ PD+ T+N++I G C A++LFE++ +P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ +LID+ C +G++D+A M +M G +V+TY+ LIDG+ K+ + A ++++
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + +S N V+Y+ LIDGLCK +E+A + PD TY L+ +C+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+A + +M NG PD + TL
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTL 581
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 37/240 (15%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD AL + Q+ G +ITYNT+I G+C N+ EA ++F+++ + NS+T+
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID CK R++DA + +M+ +G K + TY+ L+ + + ++K A D+ + M N
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 128 ISPNIVSYSILIDGLCKRGLME-----------------------------------EAL 152
P+IV+Y LI GLCK G +E EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 153 YAFHCALD-NHLLPDVVTYAILIRGYCKAGRP-TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
F L+ N PD V+Y I+ RG C G P EA+ +L G +P+ L LA+
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 102/188 (54%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A++LF ++ +G EPD TYN +I CS +LDEA+ + +++ + IT+ LID
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FCK + +A +F +M G N VTY+ LIDG KS+ ++ A + ++M P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+ +Y+ L+ C+ G +++A N PD+VTY LI G CKAGR A +L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 191 DSMLRNGI 198
S+ GI
Sbjct: 599 RSIQMKGI 606
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 1/209 (0%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ-LKPN 61
I+E LD AL++ Q+ + G ++ N I+ G+C R+++A+ ++++ P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF L++ CK G + A + ML++G +V TY+ +I G K +K A +V +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M + SPN V+Y+ LI LCK +EEA +LPDV T+ LI+G C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
AM+L++ M G PD + L D
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 1/201 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + L A+ + + GL PD T+ T++ GY LD A+++ E++ +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+++ +++ FCKEGR++DA +M + G + T++ L++G K+ ++K A ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+ M + P++ +Y+ +I GLCK G ++EA+ + P+ VTY LI CK
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
+ EA +L + GI+PD
Sbjct: 379 NQVEEATELARVLTSKGILPD 399
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
Query: 9 DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D L + + D GL+PD YN ++ N L K++ +KP+ TF +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI A C+ ++ A +M M G + T++ ++ GY + ++ A + E+M E
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
S + VS ++++ G CK G +E+AL + + + PD T+ L+ G CKAG A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 187 MQLYDSMLRNGIMPD 201
+++ D ML+ G PD
Sbjct: 315 IEIMDVMLQEGYDPD 329
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ A +L Q+ G +PD TYN+++ +C + +A + + +T +P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI CK GR++ A+ + + KG Y+ +I G F+ + A +++
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634
Query: 122 EMCENN-ISPNIVSYSILIDGLCK-RGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
EM E N P+ VSY I+ GLC G + EA+ L+ +P+ + +L G
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 10 AALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
AAL+LF + + P+ Y I+ D+ ++ E + + + + TF IL
Sbjct: 65 AALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 69 IDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I+++ + D+ + M+++ G K + Y+ +++ ++K + +M
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I P++ ++++LI LC+ + A+ L+PD T+ +++GY + G A+
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 188 QLYDSMLRNG 197
++ + M+ G
Sbjct: 245 RIREQMVEFG 254
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENNISPNI 132
+ G DD + M + T+ LI+ Y + + V + M E + P+
Sbjct: 95 RSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDT 154
Query: 133 VSYS----ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
Y+ +L+DG + + E +A + PDV T+ +LI+ C+A + A+
Sbjct: 155 HFYNRMLNLLVDGNSLK--LVEISHAKMSVWG--IKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 189 LYDSMLRNGIMPDGLLLSTL 208
+ + M G++PD +T+
Sbjct: 211 MLEDMPSYGLVPDEKTFTTV 230
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 114/202 (56%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A+ + Q+ + G++PD++ Y TII C ++ A+ LF+++ ++P+ + +T
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L++ C GR DA + M ++ K +V+T++ LID + K A ++Y EM
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+I+PNI +Y+ LI+G C G ++EA F+ PDVV Y LI G+CK + +A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 187 MQLYDSMLRNGIMPDGLLLSTL 208
M+++ M + G+ + + +TL
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTL 358
Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 115/200 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H++ AL LF Q+ + G+ PD++ Y +++ G C+ R +A L +T ++KP+
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
ITF LIDAF KEG+ DA ++++M+ N+ TY+ LI+G+ + A ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M P++V+Y+ LI+G CK +++A+ F+ L + +TY LI+G+ + G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+P A +++ M+ G+ P+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPN 386
Score = 113 bits (283), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 122/204 (59%), Gaps = 3/204 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A ++F + +G PD++ Y ++I G+C ++D+A+++F +++ L N+IT+T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-- 125
LI F + G+ + A +FS M+ +G N+ TY+ L+ + +K A ++E+M +
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 126 -NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
+ ++PNI +Y++L+ GLC G +E+AL F + ++TY I+I+G CKAG+
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 185 EAMQLYDSMLRNGIMPDGLLLSTL 208
A+ L+ S+ G+ P+ + +T+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTM 501
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE A +L+ ++ + P+I TY ++I G+C +DEA Q+F + P+
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T LI+ FCK ++DDA +F +M +KG N +TY+ LI G+ + A +V+
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHL---LPDVVTYAILIRGYC 178
M + PNI +Y++L+ LC G +++AL F + P++ TY +L+ G C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 179 KAGRPTEAMQLYDSMLR 195
G+ +A+ +++ M +
Sbjct: 437 YNGKLEKALMVFEDMRK 453
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L L G+ D+ T N ++ +C ++ A K+ + +P+ +TFT
Sbjct: 88 FDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTS 147
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI+ FC RM++A M ++M+E G K +VV Y+ +ID K+ ++ A ++++M
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I P++V Y+ L++GLC G +A + PDV+T+ LI + K G+ +A
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
+LY+ M+R I P+ ++L +
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLIN 290
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
L +T R ++PD+IT+N +I + + +A +L+ ++ + + PN T+T LI+ FC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
EG +D+A MF M KG +VV Y+ LI+G+ K + + A ++ EM + ++ N +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
+Y+ LI G + G A F + + P++ TY +L+ C G+ +A+ +++ M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 194 LR---NGIMPD 201
+ +G+ P+
Sbjct: 414 QKREMDGVAPN 424
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL LF + + P II + ++ + + D + L + L + + + T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+L++ FC+ + A+ KM++ G + ++VT++ LI+G+ M+ A + +M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
I P++V Y+ +ID LCK G + AL F + + PDVV Y L+ G C +GR +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 187 MQLYDSMLRNGIMPDGLLLSTLAD 210
L M + I PD + + L D
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALID 255
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL---KPNSITF 65
+ A ++F + RG+ P+I TYN ++ C ++ +A+ +FE + ++ PN T+
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
+L+ C G+++ A M+F M ++ ++TY+ +I G K+ +K+A +++ +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFH 156
+ PN+V+Y+ +I GL + GL EA F
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 8 LDAALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
+ AL +F + R G+ P+I TYN ++ G C +L++A+ +FE + ++ IT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+TI+I CK G++ +A +F + KG K NVVTY+ +I G F+ A ++ +M
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 125 ENNIS 129
E+ +S
Sbjct: 523 EDGVS 527
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 111/194 (57%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ A +L ++ +G EP ++TY ++I G ++RLDEA LFE+ +++ N + ++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID F K GR+D+A ++ ++++KG N+ T++ L+D K++ + A ++ M E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+PN V+Y ILI+GLCK +A + + P ++Y +I G KAG EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 188 QLYDSMLRNGIMPD 201
L+D NG +PD
Sbjct: 783 ALFDRFKANGGVPD 796
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
LIK + +LF + ++G D YN +I G+C ++++A QL E++ +P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ +ID K R+D+A M+F + K + NVV YS LIDG+ K + A+ + E
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
E+ + ++PN+ +++ L+D L K + EAL F + P+ VTY ILI G CK
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ +A + M + G+ P + +T+
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTM 768
Score = 113 bits (283), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
ML + LD A +L + GL P++ T N ++ C +LDEA +FE++ P
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ ITF LID K GR+DDA ++ KML+ + N + Y+ LI +F + +Y
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
++M N SP++ + +D + K G E+ F +PD +Y+ILI G KA
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
G E +L+ SM G + D
Sbjct: 566 GFANETYELFYSMKEQGCVLD 586
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE +D+AL L ++ L+ DI+ YN I + + ++D A + F ++ LKP+ +
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T +I CK R+D+A MF + + Y+ +I GY + A+ + E
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
P++++Y+ ++ L K G ++EAL F + P++ TY ILI C+AG+
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
A +L DSM + G+ P+ ++ + D +S E C
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D A L + +G P +I YN I+ + ++DEA+++FE++ PN T+ I
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNI 382
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID C+ G++D A + M + G NV T + ++D KSQ + A ++EEM
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+P+ +++ LIDGL K G +++A + LD+ + + Y LI+ + GR +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
++Y M+ PD LL+T D
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMD 525
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%)
Query: 23 LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
P Y T+I + ++N D + LF+++ + +P FT LI F KEGR+D A
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 83 MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGL 142
+ +M A++V Y+ ID + K + A+ + E+ N + P+ V+Y+ +I L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 143 CKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
CK ++EA+ F N +P Y +I GY AG+ EA L + G +P
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ DA ++ G+++ G P + T ++ G N+L E + + + + +P +T
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI AF D +F +M E G + V ++ LI G+ K + SA + +EM +
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
++ +IV Y++ ID K G ++ A FH N L PD VTY +I CKA R EA
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 187 MQLYDSMLRNGIMP 200
+++++ + +N +P
Sbjct: 293 VEMFEHLEKNRRVP 306
Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
K++ + ++ PD+ NT + ++ +FE++ + P++ +++ILI
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
K G ++ +F M E+G + Y+ +IDG+ K + A+ + EEM P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 133 VSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
V+Y +IDGL K ++EA F A + +VV Y+ LI G+ K GR EA + +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 193 MLRNGIMPDGLLLSTLAD 210
+++ G+ P+ ++L D
Sbjct: 683 LMQKGLTPNLYTWNSLLD 700
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 74/150 (49%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K ++ AL F + + P+ +TY +I G C + + ++A ++++ +KP+
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+I++T +I K G + +A +F + G + Y+ +I+G AF ++E
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEA 151
E + + + +L+D L K +E+A
Sbjct: 822 ETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 2/171 (1%)
Query: 40 LNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
+NR E + +E+ T + P S +L+ A C+ D + +M G +V T
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN--FDALDQILGEMSVAGFGPSVNT 135
Query: 100 YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCAL 159
++ G K+ ++ +DV + M + P +Y+ LI + L F
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 160 DNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ P V + LIRG+ K GR A+ L D M + + D +L + D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ A LF + G PD YN +I G + NR +A LFE+ L +
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
+ T +L+D K ++ A ++ + + E G
Sbjct: 832 NKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 110/197 (55%)
Query: 15 FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
F Q D P+++TY ++ G+C +R++EA +L + ++ +PN I + LID CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 75 EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVS 134
G++D+A + ++M E G A + TYS LID YFK + A V +M EN+ +PN+V
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 135 YSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSML 194
Y+ +IDGLCK G +EA + P+VVTY +I G+ G+ ++L + M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 195 RNGIMPDGLLLSTLADY 211
G+ P+ + L D+
Sbjct: 807 SKGVAPNYVTYRVLIDH 823
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 16/218 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ A + ++ +G PD TY+ ++ C+ ++++ A LFE++ L + T+TI+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
+D+FCK G ++ A F++M E G NVVTY+ LI Y K++ + A +++E M
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CAL--------------DNHLLPDVVTYAI 172
PNIV+YS LIDG CK G +E+A F C DN P+VVTY
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 173 LIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
L+ G+CK+ R EA +L D+M G P+ ++ L D
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 16/219 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ A LF ++ GL D+ TY ++ +C +++A + F ++ V PN +T+T
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
LI A+ K ++ A +F ML +G N+VTYS LIDG+ K+ ++ A ++E MC
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 125 -------------ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYA 171
+N+ PN+V+Y L+DG CK +EEA P+ + Y
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 172 ILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
LI G CK G+ EA ++ M +G S+L D
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 2/199 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K LD A ++ ++++ G + TY+++I Y + R D A ++ K+ PN
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T +ID CK G+ D+A + M EKG + NVVTY+ +IDG+ +++ ++ E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M ++PN V+Y +LID CK G ++ A H Y +I G+ K
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863
Query: 182 RPTEAMQLYDSMLRNGIMP 200
E++ L D + ++ P
Sbjct: 864 --IESLGLLDEIGQDDTAP 880
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYC----SLN--RLDEAVQLFEKLTCVQLKPNSIT 64
A KL ++ G P + YN +I C SLN LD A + + ++ + N I
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ C G+ + A + +M+ +G + TYS +++ + M+ AF ++EEM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 125 ENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPT 184
+ ++ +Y+I++D CK GL+E+A F+ + P+VVTY LI Y KA + +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 185 EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 222
A +L+++ML G +P+ + S L D + ++ ++ C
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 104/194 (53%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A K + ++ G+ + I ++ CS + ++A + ++ P++ T++
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+++ C +M+ A ++F +M G A+V TY+ ++D + K+ ++ A + EM E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+PN+V+Y+ LI K + A F L LP++VTY+ LI G+CKAG+ +A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 188 QLYDSMLRNGIMPD 201
Q+++ M + +PD
Sbjct: 609 QIFERMCGSKDVPD 622
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A KL + ++G +P+++TY +I G+ + +++ ++L E++ + PN +T+ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
ID CK G +D A + +M + + Y +I+G+ ++ + + +E+ +++
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 878
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFH--CALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+P + Y +LID L K +E AL L+ TY LI C A + A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 187 MQLYDSMLRNGIMPD 201
QL+ M + G++P+
Sbjct: 939 FQLFSEMTKKGVIPE 953
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL+ G+L D P TYN +I + +RLD A + +++ L+ + T
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK G+ +A + + + V Y+ LI G ++ + A D M + P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+V+YS L+ G + + + + P + L+ YC +G + A +L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 191 DSMLRNGIMP 200
M++ G MP
Sbjct: 396 KKMVKCGHMP 405
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 31 NTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
N ++ +C A++ +L + +P+ T+ LI AF K R+D A+++ +M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 91 KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
+ + T C K + A + E N P+ V Y+ LI GLC+ L EE
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320
Query: 151 ALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
A+ + LP+VVTY+ L+ G + ++ + M+ G P + ++L
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
PD + Y +I G C + +EA+ ++ PN +T++ L+ + ++ +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
+ M+ +G + ++ L+ Y S + A+ + ++M + P V Y+ILI +C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 145 RG------LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGI 198
L++ A A+ L ++ + + + R C AG+ +A + M+ G
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 199 MPDGLLLSTLADY 211
+PD S + +Y
Sbjct: 480 IPDTSTYSKVLNY 492
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ L+L ++ +G+ P+ +TY +I C LD A L E++ ++ +
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 68 LIDAFCKE-----------GRMDDATM------------------MFSKMLEKGP--KAN 96
+I+ F KE G+ D A M ++LE+ A
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 97 VV----TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
+V TY+ LI+ + +++AF ++ EM + + P + S+ LI GL + + EAL
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LIKECHLDAALKLFGQLT--DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
LIK L+ AL+L ++ L TYN++I C N+++ A QLF ++T +
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 60 PNSITFTILIDAFCKEGRMDDATMMF 85
P +F LI + ++ +A ++
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLL 977
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 123/217 (56%), Gaps = 1/217 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L A + + + G +PD++T+++II C ++ E L ++ + + PN +T+T
Sbjct: 241 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 300
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L+D+ K A ++S+M+ +G ++V Y+ L+DG FK+ +++ A ++ + E+
Sbjct: 301 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 360
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
N PN+V+Y+ L+DGLCK G + A + L+ ++P+VVTY+ +I GY K G EA
Sbjct: 361 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 420
Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
+ L M ++P+G T+ D L +G +E I
Sbjct: 421 VSLLRKMEDQNVVPNGFTYGTVID-GLFKAGKEEMAI 456
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 108/198 (54%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
L ++ + + P+ +TY T++ N A+ L+ ++ + + + +T+L+D
Sbjct: 283 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 342
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
K G + +A F +LE NVVTY+ L+DG K+ ++ SA + +M E ++ PN+V
Sbjct: 343 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 402
Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
+YS +I+G K+G++EEA+ D +++P+ TY +I G KAG+ A++L M
Sbjct: 403 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 462
Query: 194 LRNGIMPDGLLLSTLADY 211
G+ + +L L ++
Sbjct: 463 RLIGVEENNYILDALVNH 480
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ + LKL+ ++ G++P +++ N ++ C +++EA+ + ++ +++ PN
Sbjct: 587 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 646
Query: 64 TFTILIDA-----------------------------------FCKEGRMDDATMMFSKM 88
T+ I +D CK G A M+ M
Sbjct: 647 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 706
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLM 148
+G + VT++ L+ GYF +++ A Y M E ISPN+ +Y+ +I GL GL+
Sbjct: 707 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 766
Query: 149 EEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD----GLL 204
+E + PD TY LI G K G +M +Y M+ +G++P +L
Sbjct: 767 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 826
Query: 205 LSTLAD 210
+S A+
Sbjct: 827 ISEFAN 832
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 106/198 (53%), Gaps = 1/198 (0%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+K+ L+ A+ L ++ D+ + P+ TY T+I G + + A++L +++ + ++ N+
Sbjct: 412 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 471
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
L++ + GR+ + + M+ KG + + Y+ LID +FK + ++A EE
Sbjct: 472 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 531
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M E + ++VSY++LI G+ K G + A +A+ + + PD+ T+ I++ K G
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 590
Query: 183 PTEAMQLYDSMLRNGIMP 200
++L+D M GI P
Sbjct: 591 SEGILKLWDKMKSCGIKP 608
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 22 GLEPDI--------------------------------ITYNTIICGYCSLNRLDEAVQL 49
G+ PD+ +TYNT+I G C DEA Q
Sbjct: 126 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 185
Query: 50 FEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
++ + + P+++++ LID FCK G A + ++ E N++T++ L+ Y+
Sbjct: 186 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYY- 240
Query: 110 SQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVT 169
N+ + + Y +M + P++V++S +I+ LCK G + E + + P+ VT
Sbjct: 241 --NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 298
Query: 170 YAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
Y L+ KA A+ LY M+ GI D ++ + L D
Sbjct: 299 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 339
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A + G + RG PD +T+N+++ GY + + +A+ + + + PN T+ +I
Sbjct: 699 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 758
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
G + + S+M +G + + TY+ LI G K NMK + +Y EM + + P
Sbjct: 759 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 818
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
+Y++LI G M +A + P+ TY +I G CK
Sbjct: 819 KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K DA K L G++ YNT+I C L +A + + P+++
Sbjct: 657 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 716
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF L+ + + A +S M+E G NV TY+ +I G + +K EM
Sbjct: 717 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 776
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ P+ +Y+ LI G K G M+ ++ + + + L+P TY +LI + G+
Sbjct: 777 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 836
Query: 184 TEAMQLYDSMLRNGIMPD 201
+A +L M + G+ P+
Sbjct: 837 LQARELLKEMGKRGVSPN 854
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
H+ AL + + + G+ P++ TYNTII G + E + ++ ++P+ T+
Sbjct: 730 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 789
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI K G M + ++ +M+ G TY+ LI + M A ++ +EM +
Sbjct: 790 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 849
Query: 127 NISPNIVSYSILIDGLCK 144
+SPN +Y +I GLCK
Sbjct: 850 GVSPNTSTYCTMISGLCK 867
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 17 QLTDRGLEPDIIT---------YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+T R +PD+ ++T+ Y S RL A + + + P+S +
Sbjct: 41 SITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNS 100
Query: 68 LIDAFCKEGRM-DDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI F G + D ++++SKM+ G +V + LI + K + A +
Sbjct: 101 LIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-- 158
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
IS + V+Y+ +I GLC+ GL +EA + +LPD V+Y LI G+CK G A
Sbjct: 159 -ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA 217
Query: 187 MQLYDSMLRNGIMPDGLLLSTLADYNLQS 215
L D + ++ +LLS+ YNL +
Sbjct: 218 KALVDEISELNLITHTILLSSY--YNLHA 244
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L A K F L + P+++TY ++ G C L A + ++ + PN
Sbjct: 341 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 400
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ +I+ + K+G +++A + KM ++ N TY +IDG FK+ + A ++ +
Sbjct: 401 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 460
Query: 122 EMC-----ENN------------------------------ISPNIVSYSILIDGLCKRG 146
EM ENN ++ + ++Y+ LID K G
Sbjct: 461 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 520
Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
E AL + + DVV+Y +LI G K G+ A Y M GI PD
Sbjct: 521 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPD 574
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 114/205 (55%), Gaps = 1/205 (0%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN-RLDEAVQLFEKLTCVQLK 59
+L++E L+ A K + + + GL P + + N +I C + +D +++F ++
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 60 PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
P+S T+ LI C+ GR+D+A +F++M+EK VVTY+ LI+G S+N+ A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
EEM I PN+ +YS L+DGLCK G +A+ F + P++VTY LI G CK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLL 204
+ EA++L D M G+ PD L
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGL 334
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A KLF ++ ++ P ++TY ++I G C +DEA++ E++ ++PN T++
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L+D CK+GR A +F M+ +G + N+VTY+ LI G K Q ++ A ++ + M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAI-------LIRGYCK 179
+ P+ Y +I G C EA + + P+ +T+ I ++RG C
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC- 385
Query: 180 AGRPTEAMQLYDSMLRNGI 198
A P+ A LY SM GI
Sbjct: 386 ANYPSRAFTLYLSMRSRGI 404
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
+L++F ++ D +P Y T++ N+L+ A + ++ + + L P + +LI
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 71 AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
A C+ +G +D +F +M ++G + TY LI G + + A ++ EM E + +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
P +V+Y+ LI+GLC ++EA+ + P+V TY+ L+ G CK GR +AM+L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 190 YDSMLRNGIMPDGLLLSTL 208
++ M+ G P+ + +TL
Sbjct: 285 FEMMMARGCRPNMVTYTTL 303
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++D A++ ++ +G+EP++ TY++++ G C R +A++LFE + +PN +T+T
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI CKE ++ +A + +M +G K + Y +I G+ + A + +EM
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 127 NISPNIVSYSI-------LIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
I+PN ++++I ++ GLC A + + +V T L++ CK
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCK 420
Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 216
G +A+QL D ++ +G +P L + L +
Sbjct: 421 KGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 34 IC-GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
IC GY ++R +++++F K+ P+ + ++ +E +++ A + M E G
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151
Query: 93 PKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
V + + LI ++ + + ++ EM + P+ +Y LI GLC+ G ++EA
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
F ++ P VVTY LI G C + EAM+ + M GI P+ S+L D
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 29/173 (16%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE + A++L ++ +GL+PD Y +I G+C++++ EA +++ + PN
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ I + S + +G AN + AF +Y
Sbjct: 367 RLTWNIHVKT--------------SNEVVRGLCANYPS---------------RAFTLYL 397
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILI 174
M IS + + L+ LCK+G ++A+ + + +P T+ +LI
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ +L ++K+F ++ D+ ++P++I+YN++I G C+ ++ EA+ + +K+ ++PN I
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ FCK + +A MF + +G Y+ LID Y K + F + EEM
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I P++ +Y+ LI GLC+ G +E A F L + LPD+VT+ IL+ GYC+ G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD-QLTSKGLPDLVTFHILMEGYCRKGES 486
Query: 184 TEAMQLYDSMLRNGIMPDGL 203
+A L M + G+ P L
Sbjct: 487 RKAAMLLKEMSKMGLKPRHL 506
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+KE ++ ++ R ++P++ T+N +I C ++++A + E + PN
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257
Query: 62 SITFTILIDAFCK---EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
+++ LID +CK G+M A + +M+E N+ T++ LIDG++K N+ +
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
V++EM + ++ PN++SY+ LI+GLC G + EA+ + + P+++TY LI G+C
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 179 KAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
K EA+ ++ S+ G +P + + L D
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 3/203 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLN---RLDEAVQLFEKLTCVQL 58
L K ++ A + + G P++++YNT+I GYC L ++ +A + +++ +
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 59 KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
PN TF ILID F K+ + + +F +ML++ K NV++Y+ LI+G + A
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 119 VYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYC 178
+ ++M + PN+++Y+ LI+G CK +++EAL F +P Y +LI YC
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 179 KAGRPTEAMQLYDSMLRNGIMPD 201
K G+ + L + M R GI+PD
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPD 435
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D L ++ G+ PD+ TYN +I G C ++ A +LF++LT L P+ +TF I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHI 475
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-CEN 126
L++ +C++G A M+ +M + G K +TY+ ++ GY K N+K+A ++ +M E
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAIL 173
+ N+ SY++L+ G ++G +E+A + L+ L+P+ +TY I+
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 2/195 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L AL +FG + +G P YN +I YC L ++D+ L E++ + P+ T+
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI C+ G ++ A +F ++ KG ++VT+ L++GY + + A + +EM +
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 128 ISPNIVSYSILIDGLCKRGLMEEAL-YAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ P ++Y+I++ G CK G ++ A + L +V +Y +L++GY + G+ +A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 187 MQLYDSMLRNGIMPD 201
L + ML G++P+
Sbjct: 561 NMLLNEMLEKGLVPN 575
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + +++AA KLF QLT +GL PD++T++ ++ GYC +A L ++++ + LKP
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+T+ I++ +CKEG + AT M ++M E+ + NV +Y+ L+ GY + ++ A +
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEE 150
EM E + PN ++Y I+ + + +G + +
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 28 ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
I + ++ Y + +R + + F++ K ++++ L+ A KE R D ++ +
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 88 MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK--- 144
M+ + + NV T++ +I+ K+ M A DV E+M SPN+VSY+ LIDG CK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
G M +A ++N + P++ T+ ILI G+ K +M+++ ML + P+ +
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 205 LSTL 208
++L
Sbjct: 334 YNSL 337
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
NSI +L+ A+ R + F + G K + ++ L+ K VY
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEA------LYAFHCALDNHLLPDVVTYAILI 174
+EM I PN+ +++++I+ LCK G M +A + + C+ P+VV+Y LI
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS------PNVVSYNTLI 265
Query: 175 RGYCK---AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
GYCK G+ +A + M+ N + P+ + L D
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 2 LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
L KE +A + +L D G PDI+TY+T+I Y + L A+++ ++ +K
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N+IT ++DA CKE ++D+A + + ++G + VTY LI G+F+ + ++ A +++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+EM + I+P + +++ LI GLC G E A+ F ++ LLPD T+ +I GYCK
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
GR +A + Y+ +++ PD
Sbjct: 570 GRVEKAFEFYNESIKHSFKPD 590
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 109/192 (56%), Gaps = 1/192 (0%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFT 66
+ +A ++F + G+ ++ T+N ++ GYC +L++A+ + E++ ++ P+++T+
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
++ A K+GR+ D + M + G N VTY+ L+ GY K ++K AF + E M +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
N+ P++ +Y+ILI+GLC G M E L L PDVVTY LI G + G EA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 187 MQLYDSMLRNGI 198
+L + M +G+
Sbjct: 365 RKLMEQMENDGV 376
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 1/200 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE LD A L RG D +TY T+I G+ ++++A+++++++ V++ P
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF LI C G+ + A F ++ E G + T++ +I GY K ++ AF+ Y
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
E +++ P+ + +IL++GLCK G+ E+AL F+ ++ + D VTY +I +CK
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDK 639
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+ EA L M G+ PD
Sbjct: 640 KLKEAYDLLSEMEEKGLEPD 659
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 4/205 (1%)
Query: 10 AALKLFGQLTDRGLEPDIITYNTIICG---YCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
AL++F ++ L+P+++T NT++ G Y S + A ++F+ + + + N TF
Sbjct: 149 VALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFN 208
Query: 67 ILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
+L++ +C EG+++DA M +M+ E + VTY+ ++ K + ++ +M +
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
N + PN V+Y+ L+ G CK G ++EA ++LPD+ TY ILI G C AG E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
++L D+M + PD + +TL D
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLID 353
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 1/208 (0%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ L +L + GL P+ +TYN ++ GYC L L EA Q+ E + + P+
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ ILI+ C G M + + M + +VVTY+ LIDG F+ A + E+M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGR 182
+ + N V+++I + LCK E +D H PD+VTY LI+ Y K G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 183 PTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ A+++ M + GI + + L+T+ D
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILD 459
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 60 PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG---YFKSQNMKSA 116
P+ F I + A+ EG+ A +F KM+ K N++T + L+ G Y S ++ SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 117 FDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLL-PDVVTYAILIR 175
+V+++M + +S N+ ++++L++G C G +E+AL + + PD VTY +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
K GR ++ +L M +NG++P+ + + L
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE + AL F L + E D +TYNT+I +C +L EA L ++ L+P+
Sbjct: 601 LCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ I ++G++ + + K G F S MK V
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKK----------------FSGKFGS--MKRDLQVET 701
Query: 122 EM------CENNISPNIVSYSILIDGLCKRGLMEE 150
E + ++ ++YS +ID LC RG ++E
Sbjct: 702 EKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 23/106 (21%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV------- 56
K+ L A L ++ ++GLEPD TYN+ I +L E +L +K +
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRD 696
Query: 57 ----------------QLKPNSITFTILIDAFCKEGRMDDATMMFS 86
+L +I ++ +ID C GR+ + + ++
Sbjct: 697 LQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 35/237 (14%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L AL G++ G EP I+T+ +++ G+C +NR EA+ L +++ + +PN + +
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 67 ILIDAFCKEGRMDDA-----------------------TMMF------------SKMLEK 91
+ID+ C++G+++ A T +F S M+
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 92 GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEA 151
G +V+T+S LID Y K + A Y EM + +++PNIV+Y+ LI+GLC GL++EA
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 152 LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + P+ VTY LI GYCKA R + M++ M R+G+ D +TL
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE L A K + ++ R + P+I+TYN++I G C LDEA ++ L PN++
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ +CK R+DD + M G + TY+ L GY ++ +A V M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ P++ +++IL+DGLC G + +AL + + ++TY I+I+G CKA +
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 184 TEAMQLYDSMLRNGIMPD 201
+A L+ S+ G+ PD
Sbjct: 446 EDAWYLFCSLALKGVSPD 463
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A K+ L +G P+ +TYNT+I GYC R+D+ +++ ++ + ++ T+
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L +C+ G+ A + +M+ G ++ T++ L+DG + A E++ ++
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I++Y+I+I GLCK +E+A Y F + PDV+TY ++ G + EA
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484
Query: 188 QLYDSMLR-NGIMP 200
+LY M + +G+MP
Sbjct: 485 ELYRKMQKEDGLMP 498
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL LF + + P I+ ++ ++ LN+ + + LF L + + + +FT LID
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC+ R+ A KM++ G + ++VT+ L++G+ A + +++ P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+V Y+ +ID LC++G + AL + PDVVTY LI +G + ++
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 191 DSMLRNGIMPDGLLLSTLAD 210
M+R GI PD + S L D
Sbjct: 243 SDMMRMGISPDVITFSALID 262
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+A + LF L G+ D+ ++ T+I +C RL A+ K+ + +P+ +TF L
Sbjct: 96 EAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSL 155
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
++ FC R +A + +++ G + NVV Y+ +ID + + +A DV + M + I
Sbjct: 156 VNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P++V+Y+ LI L G + + + PDV+T++ LI Y K G+ EA +
Sbjct: 216 RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275
Query: 189 LYDSMLRNGIMPD 201
Y+ M++ + P+
Sbjct: 276 QYNEMIQRSVNPN 288
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D +K+ ++ G++ D TYNT+ GYC + A ++ ++ + P+
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF IL+D C G++ A + + + ++TY+ +I G K+ ++ A+ ++ +
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSL 455
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
+SP++++Y ++ GL ++ L EA
Sbjct: 456 ALKGVSPDVITYITMMIGLRRKRLWREA 483
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL 53
L K ++ A LF L +G+ PD+ITY T++ G EA +L+ K+
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 117/207 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE +L A L+ ++ R + P++ TYN++I G+C L +A +F+ + P+
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R++D +F +M +G + TY+ LI GY ++ + A V+
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + +SP+IV+Y+IL+D LC G +E+AL + + D++TY I+I+G C+
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ EA L+ S+ R G+ PD + T+
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITM 470
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 108/198 (54%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L + G P+++ YNT+I G C L+ A+++F + ++ +++T+ LI
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
GR DA + M+++ NV+ ++ LID + K N+ A ++Y+EM ++ P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N+ +Y+ LI+G C G + +A Y F + PDVVTY LI G+CK+ R + M+L+
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 191 DSMLRNGIMPDGLLLSTL 208
M G++ D +TL
Sbjct: 348 CEMTYQGLVGDAFTYNTL 365
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 114/209 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ AL++F + +G+ D +TYNT+I G + R +A +L + ++ PN
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I FT LID F KEG + +A ++ +M+ + NV TY+ LI+G+ + A +++
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M P++V+Y+ LI G CK +E+ + F L+ D TY LI GYC+AG
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ A ++++ M+ G+ PD + + L D
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 112/193 (58%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L A +F + +G PD++TYNT+I G+C R+++ ++LF ++T L ++ T+
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI +C+ G+++ A +F++M++ G ++VTY+ L+D + ++ A + E++ ++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ +I++Y+I+I GLC+ ++EA F + PD + Y +I G C+ G EA
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 188 QLYDSMLRNGIMP 200
+L M +G MP
Sbjct: 485 KLCRRMKEDGFMP 497
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D A LF ++ P I+ + ++ +N+ D + L+ K+ + + + +FTI
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI FC+ R+ A + KM++ G + ++VT L++G+ + + A + + M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
PN+V Y+ +I+GLCK + AL F+C + D VTY LI G +GR T+A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
+L M++ I P+ + + L D
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALID 262
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +KLF ++T +GL D TYNT+I GYC +L+ A ++F ++ + P+ +
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+D C G+++ A +M + + +++TY+ +I G ++ +K A+ ++ +
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEA 151
+ P+ ++Y +I GLC++GL EA
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREA 483
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 104/203 (51%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L+ ++ + G+ D+ ++ +I +C +RL A+ L K+ + +P+ +T
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ FC+ R +A + M G NVV Y+ +I+G K++++ +A +V+ M +
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I + V+Y+ LI GL G +A + + P+V+ + LI + K G EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
LY M+R ++P+ ++L +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLIN 297
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
+ D+A LF ++ + P+ + FT ++ K + D ++ KM G ++ +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDN 161
LI + + + A + +M + P+IV+ L++G C+ +EA+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 162 HLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
+P+VV Y +I G CK A++++ M + GI D + +TL L +SG
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS-GLSNSG 233
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%)
Query: 116 AFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
AF ++ EM ++ P+IV ++ ++ + K + +Y +H + + D+ ++ ILI
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 176 GYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
+C+ R + A+ L M++ G P + L +L + Q + QE
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE 167
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE ++AA LF ++ RGL PD +TYN++I G+ + RLD+ V FE++ + +P+ I
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ FCK G++ + +M G K NVV+YS L+D + K M+ A Y +M
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ PN +Y+ LID CK G + +A + L + +VVTY LI G C A R
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
EA +L+ M G++P+ LA YN
Sbjct: 454 KEAEELFGKMDTAGVIPN------LASYN 476
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 115/213 (53%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L L+ + ++ GL+P++++Y+T++ +C + +A++ + + V L PN T+T
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LIDA CK G + DA + ++ML+ G + NVVTY+ LIDG ++ MK A +++ +M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
+ PN+ SY+ LI G K M+ AL + + PD++ Y I G C + A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
+ + M GI + L+ +TL D +S E
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ A +LFG++ G+ P++ +YN +I G+ +D A++L +L +KP+ + +
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I C +++ A ++ ++M E G KAN + Y+ L+D YFKS N + +EM E
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFH-CALDNHLLPDVVTYAILIRGYCKAGRPTE 185
+I +V++ +LIDGLCK L+ +A+ F+ + D L + + +I G CK +
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
A L++ M++ G++PD ++L D N + E
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K ++D AL+L +L RG++PD++ Y T I G CSL +++ A + ++ +K N
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
S+ +T L+DA+ K G + + +M E + VVT+ LIDG K++ + A D +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+ + + N ++ +IDGLCK +E A F + L+PD Y L+ G K
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
G EA+ L D M G+ D L ++L
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+LI L+ A++ F ++ + P + N ++ + L + D+ + F+ + +P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
T+ I+ID CKEG ++ A +F +M +G + VTY+ +IDG+ K + +
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
EEM + P++++Y+ LI+ CK G + L + N L P+VV+Y+ L+ +CK
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN 212
G +A++ Y M R G++P+ ++L D N
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + A+K + + GL P+ TY ++I C + L +A +L ++ V ++ N +
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T LID C RM +A +F KM G N+ +Y+ LI G+ K++NM A ++ E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I P+++ Y I GLC +E A + + + + + Y L+ Y K+G P
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 184 TEAMQLYDSM 193
TE + L D M
Sbjct: 559 TEGLHLLDEM 568
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P ++ + L L+EA+Q F K+ ++ P + + L+ F K G+ DD
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
F M+ G + V TY+ +ID K ++++A ++EEM + P+ V+Y+ +IDG K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
G +++ + F D PDV+TY LI +CK G+ ++ Y M NG+ P+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 205 LSTLAD 210
STL D
Sbjct: 370 YSTLVD 375
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFTILI 69
L L ++ + +E ++T+ +I G C + +AV F +++ L+ N+ FT +I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 70 DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
D CK+ +++ AT +F +M++KG + Y+ L+DG FK N+ A + ++M E +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
++++Y+ L+ GL +++A + + PD V +++ + + G EA++L
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Query: 190 YDSMLRNGIM 199
++++ ++
Sbjct: 741 QSYLMKHQLL 750
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ ++AA LF Q+ +GL PD Y +++ G + EA+ L +K+ + +K +
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
+ +T L+ ++ A +M+ +G
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 46/88 (52%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
K+ ++ AL L ++ + G++ D++ Y +++ G N+L +A E++ + P+
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLE 90
+ ++ + G +D+A + S +++
Sbjct: 719 VLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 39/246 (15%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL-------- 53
L+ +D+A ++F + ++PDI+TYNT+I GYC + +A++ +
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 54 ------------------TCV-----------QLKPNSITFTILIDAFCKEGRMDDATMM 84
+CV Q+ P++ F+++I CKEG++++ +
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTV 349
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
F M+ KG K NV Y+ LIDGY KS +++ A + M + P++V+YS++++GLCK
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 145 RGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLL 204
G +EEAL FH + L + + Y+ LI G KAGR EA +L++ M G D
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 205 LSTLAD 210
+ L D
Sbjct: 470 YNALID 475
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%)
Query: 12 LKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
L ++ ++ + G+EP + TYN ++ G S +D A ++FE + ++KP+ +T+ +I
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266
Query: 72 FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
+CK G+ A M +G +A+ +TY +I + + S +Y+EM E I
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
++S++I GLCK G + E F + P+V Y +LI GY K+G +A++L
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 192 SMLRNGIMPDGLLLSTLAD 210
M+ G PD + S + +
Sbjct: 387 RMIDEGFKPDVVTYSVVVN 405
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ A++L ++ D G +PD++TY+ ++ G C R++EA+ F L NS+
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++ LID K GR+D+A +F +M EKG + Y+ LID + K + + A +++ M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 124 -CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
E + +Y+IL+ G+ K EEAL + +D + P + L G C +G+
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 183 PTEAMQLYDSMLRNGIMPDG 202
A ++ D + G++ D
Sbjct: 554 VARACKILDELAPMGVILDA 573
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE L+ +F + +G +P++ Y +I GY +++A++L ++ KP+
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++++++ CK GR+++A F G N + YS LIDG K+ + A ++E
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVV-TYAILIRGYCKA 180
EM E + + Y+ LID K ++EA+ F + V TY IL+ G K
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
R EA++L+D M+ GI P L+
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACFRALS 545
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 96 NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
V + LI + K ++ V+ +M EN I P + +Y+ L++GL ++ A F
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ PD+VTY +I+GYCKAG+ +AM+ M G D + T+
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 113/203 (55%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+AA LF ++T+R +E D+ +YNT++ C ++D A ++ ++ ++ PN ++++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+ID F K GR D+A +F +M G + V+Y+ L+ Y K + A D+ EM
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I ++V+Y+ L+ G K+G +E F H+LP+++TY+ LI GY K G EAM
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 188 QLYDSMLRNGIMPDGLLLSTLAD 210
+++ G+ D +L S L D
Sbjct: 535 EIFREFKSAGLRADVVLYSALID 557
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 113/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D A ++ Q+ + + P++++Y+T+I G+ R DEA+ LF ++ + + + +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++ L+ + K GR ++A + +M G K +VVTY+ L+ GY K V+ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
++ PN+++YS LIDG K GL +EA+ F L DVV Y+ LI CK G
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A+ L D M + GI P+ + +++ D
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIID 592
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 98/177 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K D AL LFG++ G+ D ++YNT++ Y + R +EA+ + ++ V +K + +
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ L+ + K+G+ D+ +F++M + N++TYS LIDGY K K A +++ E
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+ ++V YS LID LCK GL+ A+ + P+VVTY +I + ++
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 38/239 (15%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTII--CGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ A+ +F + + GL P+++TYN +I CG + + + F+++ ++P+ ITF
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME-FKQVAKFFDEMQRNGVQPDRITFN 343
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L+ + G + A +F +M + + +V +Y+ L+D K M AF++ +M
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAF------HCALD----NHLLP----------- 165
I PN+VSYS +IDG K G +EAL F ALD N LL
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 166 --------------DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
DVVTY L+ GY K G+ E +++ M R ++P+ L STL D
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 82/143 (57%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ AL + ++ G++ D++TYN ++ GY + DE ++F ++ + PN +T++ L
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
ID + K G +A +F + G +A+VV YS LID K+ + SA + +EM + I
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 129 SPNIVSYSILIDGLCKRGLMEEA 151
SPN+V+Y+ +ID + M+ +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRS 603
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 3/200 (1%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++F G + ++ +I Y +EA+ +F + L+PN +T+ +ID
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 71 AFCKEGRMD--DATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
A C +G M+ F +M G + + +T++ L+ + ++A ++++EM I
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
++ SY+ L+D +CK G M+ A ++P+VV+Y+ +I G+ KAGR EA+
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 189 LYDSMLRNGIMPDGLLLSTL 208
L+ M GI D + +TL
Sbjct: 431 LFGEMRYLGIALDRVSYNTL 450
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ D K+F ++ + P+++TY+T+I GY EA+++F + L+ + +
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
++ LIDA CK G + A + +M ++G NVVTY+ +ID + +S M + D
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Query: 33 IICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT--FTILIDAFCKEGRMDDATMMFSKMLE 90
II + N D+AV +E + + N + +I + G++ A +F
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 91 KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEE 150
G V +S LI Y +S + A V+ M E + PN+V+Y+ +ID C +G ME
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEF 320
Query: 151 ALYA--FHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
A F N + PD +T+ L+ + G A L+D M I D +TL
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 209 AD 210
D
Sbjct: 381 LD 382
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 30/160 (18%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+++F + GL D++ Y+ +I C + AV L +++T + PN +T+ +ID
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 71 AFCKEGRMDDA------------TMMFSKMLE-KGPKA------------NVVTYSCLID 105
AF + MD + + S + E +G + N T C +
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE-E 651
Query: 106 GYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKR 145
G Q + +V+ +M + I PN+V++S +++ C R
Sbjct: 652 GM---QELSCILEVFRKMHQLEIKPNVVTFSAILNA-CSR 687
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 56/143 (39%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA--------------- 46
L K + +A+ L ++T G+ P+++TYN+II + +D +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSA 618
Query: 47 ------------VQLFEKLTC-----------------------------VQLKPNSITF 65
+QLF +LT +++KPN +TF
Sbjct: 619 LSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTF 678
Query: 66 TILIDAFCKEGRMDDATMMFSKM 88
+ +++A + +DA+M+ ++
Sbjct: 679 SAILNACSRCNSFEDASMLLEEL 701
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 122/208 (58%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + A+++F ++ +G +PD+ T+N++I G C ++ + A+ L + + N++
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+AF + G + +A + ++M+ +G + +TY+ LI G ++ + A ++E+M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ +P+ +S +ILI+GLC+ G++EEA+ + PD+VT+ LI G C+AGR
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADY 211
+ + ++ + GI PD + +TL +
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 122/220 (55%), Gaps = 1/220 (0%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + AL++ + ++G +P++ +Y ++ G+C L ++DEA + +++ LKPN++
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
F LI AFCKE R+ +A +F +M KG K +V T++ LI G + +K A + +M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ N V+Y+ LI+ +RG ++EA + + D +TY LI+G C+AG
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 223
+A L++ MLR+G P + + L + L SG E +
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILIN-GLCRSGMVEEAV 619
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 5/203 (2%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A K+ ++ RG PD ITY ++ G C + R+D A LF ++ KP + F
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFN 357
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEK-GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
LI F GR+DDA + S M+ G +V TY+ LI GY+K + A +V +M
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
PN+ SY+IL+DG CK G ++EA + + L P+ V + LI +CK R E
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 186 AMQLYDSMLRNGIMPDGLLLSTL 208
A++++ M R G PD ++L
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSL 500
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 107/200 (53%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
DA L +T G+ PD+ TYN++I GY + A+++ + KPN ++TIL
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
+D FCK G++D+A + ++M G K N V ++CLI + K + A +++ EM
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 129 SPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQ 188
P++ +++ LI GLC+ ++ AL+ + ++ + VTY LI + + G EA +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 189 LYDSMLRNGIMPDGLLLSTL 208
L + M+ G D + ++L
Sbjct: 551 LVNEMVFQGSPLDEITYNSL 570
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D+AL L +T G P+ + Y T+I NR++EA+QL E++ + P++ TF
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+I CK R+++A M ++ML +G + +TY L++G K + +A D++ + +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 350
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNH-LLPDVVTYAILIRGYCKAGRPTE 185
P IV ++ LI G G +++A + ++ ++PDV TY LI GY K G
Sbjct: 351 ---PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 186 AMQLYDSMLRNGIMPDGLLLSTLAD 210
A+++ M G P+ + L D
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVD 432
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 97/174 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
++ + A KL ++ +G D ITYN++I G C +D+A LFEK+ P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+I+ ILI+ C+ G +++A +M+ +G ++VT++ LI+G ++ ++ ++
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIR 175
++ I P+ V+++ L+ LCK G + +A +++ +P+ T++IL++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 6 CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
CH AA +F + R + P + T+ ++ +C++N +D A+ L +T PNS+ +
Sbjct: 197 CHKVAA-NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
LI + K R+++A + +M G + T++ +I G K + A + M
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 126 NNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTE 185
+P+ ++Y L++GLCK G ++ A F+ P++V + LI G+ GR +
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDD 371
Query: 186 AMQLYDSMLRN-GIMPD 201
A + M+ + GI+PD
Sbjct: 372 AKAVLSDMVTSYGIVPD 388
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%)
Query: 24 EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATM 83
EP +YN ++ S N A +F + ++ P TF +++ AFC +D A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 84 MFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLC 143
+ M + G N V Y LI K + A + EEM P+ +++ +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 144 KRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
K + EA + L PD +TY L+ G CK GR A L+
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + +D A LF ++ G P I+ N +I G C ++EAV+ +++ P+
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LI+ C+ GR++D MF K+ +G + VT++ L+ K + A + +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 122 EMCENNISPNIVSYSILIDGL 142
E E+ PN ++SIL+ +
Sbjct: 694 EGIEDGFVPNHRTWSILLQSI 714
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + ++ A++ ++ RG PDI+T+N++I G C R+++ + +F KL + P+
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNM 113
++TF L+ CK G + DA ++ + +E G N T+S L+ + +
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 58 LKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
K ++ IL+ C + A +F ML + + T+ ++ + + SA
Sbjct: 182 FKSYNVVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 118 DVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGY 177
+ +M ++ PN V Y LI L K + EAL +PD T+ +I G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 178 CKAGRPTEAMQLYDSMLRNGIMPD 201
CK R EA ++ + ML G PD
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPD 321
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 99 TYSCLIDGYFKSQNM-----------KSAFDVYEEMCENNISPNIVSYSILIDGLCKRGL 147
YSC + FKS N+ K A +V+ +M I P + ++ +++ C
Sbjct: 175 VYSC--EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 148 MEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDG 202
++ AL + +P+ V Y LI K R EA+QL + M G +PD
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
Query: 2 LIKECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+KE L A KL+ ++ + PD++ YNT+I G+C R++E +++F +++ L
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N++T+T LI F + D+A M+F +M+ G +++TY+ L+DG + N+++A V+
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALD-NHLLPDVVTYAILIRGYCK 179
E M + ++ +IV+Y+ +I+ LCK G +E+ F C+L + P+VVTY ++ G+C+
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 214
G EA L+ M +G +P+ +TL L+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E D++ YNTII G C +D+A LF K+ +KP+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ LI C GR DA+ + S MLEK ++V ++ LID + K + A +Y+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 122 EMCEN-NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
EM ++ + P++V+Y+ LI G CK +EE + F L+ + VTY LI G+ +A
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
A ++ M+ +G+ PD + + L D
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 112/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + G++ G P I+T N+++ G+C NR+ EAV L +++ + +P+++
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT L+ + + +A + +M+ KG + ++VTY +I+G K A ++ +M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ I ++V Y+ +IDGLCK M++A F+ + PDV TY LI C GR
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
++A +L ML I PD + + L D
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALID 328
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD +T+ T++ G N+ EAV L E++ +P+
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +I+ CK G D A + +KM + +A+VV Y+ +IDG K ++M AFD++ +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
M I P++ +Y+ LI LC G +A L+ ++ PD+V + LI + K G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 183 PTEAMQLYDSMLRNG-IMPDGLLLSTL 208
EA +LYD M+++ PD + +TL
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 115/210 (54%), Gaps = 1/210 (0%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D A LF ++ +G++PD+ TYN +I C+ R +A +L + + P+
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLE-KGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ F LIDAF KEG++ +A ++ +M++ K +VV Y+ LI G+ K + ++ +V+
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
EM + + N V+Y+ LI G + + A F + + + PD++TY IL+ G C
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 181 GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
G A+ +++ M + + D + +T+ +
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ +++F +++ RGL + +TY T+I G+ D A +F+++ + P+ +T+
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
IL+D C G ++ A ++F M ++ K ++VTY+ +I+ K+ ++ +D++ +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 127 NISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEA 186
+ PN+V+Y+ ++ G C++GL EEA F ++ LP+ TY LIR + G +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 187 MQLYDSMLRNGIMPD----GLLLSTLADYNLQSS 216
+L M G D GL+ + L D L S
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKS 584
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L Q+ + G+ ++ TY+ I +C ++L A+ + K+ + P+ +T
Sbjct: 91 FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ FC R+ +A + +M+E G + + VT++ L+ G F+ A + E M
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
P++V+Y +I+GLCKRG + AL + + DVV Y +I G CK +A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 188 QLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 219
L++ M GI PD L+S L +Y S S+
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 108/209 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
++++ LD A+ LFG + P I+ ++ ++ +N+ D + L E++ + + N
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++I I+ FC+ ++ A + KM++ G ++VT + L++G+ + A + +
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
+M E P+ V+++ L+ GL + EA+ + PD+VTY +I G CK G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
P A+ L + M + I D ++ +T+ D
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIID 258
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 77 RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
++DDA +F M++ P ++V +S L+ K + E+M IS N+ +YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
I I+ C+R + AL + P +VT L+ G+C R +EA+ L D M+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 197 GIMPDGLLLSTLADYNLQSSGSQE 220
G PD + +TL Q + + E
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASE 198
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ LF L+ +G++P+++TY T++ G+C +EA LF ++ PN
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
S T+ LI A ++G + + +M G + T+ + + + KS D+
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDM 588
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 112/207 (54%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
++ + A+KL ++ DRG PD++TYN ++ G C RLDEA++ + +PN I
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T I++ + C GR DA + + ML KG +VVT++ LI+ + + A D+ E+M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
++ PN +SY+ L+ G CK M+ A+ + PD+VTY ++ CK G+
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+A+++ + + G P + +T+ D
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVID 457
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 114/201 (56%), Gaps = 3/201 (1%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A K+ L G PD+ITYN +I GYC ++ A+ + ++++ + P+ +T+ ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ C G++ A + +ML++ +V+TY+ LI+ + + A + +EM + +P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
++V+Y++L++G+CK G ++EA+ + + P+V+T+ I++R C GR +A +L
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 191 DSMLRNGIMPDGLLLSTLADY 211
MLR G P + + L ++
Sbjct: 333 ADMLRKGFSPSVVTFNILINF 353
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 109/205 (53%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE LD A+K + G +P++IT+N I+ CS R +A +L + P+ +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF ILI+ C++G + A + KM + G + N ++Y+ L+ G+ K + M A + E M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
P+IV+Y+ ++ LCK G +E+A+ + P ++TY +I G KAG+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
+A++L D M + PD + S+L
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSL 490
Score = 113 bits (283), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 104/198 (52%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A KL + +G P ++T+N +I C L A+ + EK+ +PNS+++ L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FCKE +MD A +M+ +G ++VTY+ ++ K ++ A ++ ++ SP
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+++Y+ +IDGL K G +A+ L PD +TY+ L+ G + G+ EA++ +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 191 DSMLRNGIMPDGLLLSTL 208
R GI P+ + +++
Sbjct: 508 HEFERMGIRPNAVTFNSI 525
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 111/200 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L ++ L A+ + ++ G +P+ ++YN ++ G+C ++D A++ E++ P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ ++ A CK+G+++DA + +++ KG ++TY+ +IDG K+ A + +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM ++ P+ ++YS L+ GL + G ++EA+ FH + P+ VT+ ++ G CK+
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+ A+ M+ G P+
Sbjct: 534 QTDRAIDFLVFMINRGCKPN 553
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 3/200 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+++ L+ K + G PDII T+I G+C L + +A ++ E L P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT+ ++I +CK G +++A + +M +VVTY+ ++ S +K A +V +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + + P++++Y+ILI+ C+ + A+ D PDVVTY +L+ G CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
R EA++ + M +G P+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPN 308
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE +D A++ ++ RG PDI+TYNT++ C ++++AV++ +L+ P I
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +ID K G+ A + +M K K + +TYS L+ G + + A + E
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
I PN V+++ ++ GLCK + A+ ++ P+ +Y ILI G G
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 184 TEAMQLYDSMLRNGIM 199
EA++L + + G+M
Sbjct: 571 KEALELLNELCNKGLM 586
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ AL + +++ + PD++TYNTI+ C +L +A+++ +++ P+ I
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+TILI+A C++ + A + +M ++G +VVTY+ L++G K + A +M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ PN+++++I++ +C G +A L P VVT+ ILI C+ G
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 184 TEAMQLYDSMLRNGIMPDGL 203
A+ + + M ++G P+ L
Sbjct: 361 GRAIDILEKMPQHGCQPNSL 380
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 108/201 (53%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L A+++ ++ R PD+ITY +I C + + A++L +++ P+ +T+ +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ CKEGR+D+A + M G + NV+T++ ++ + A + +M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
SP++V+++ILI+ LC++GL+ A+ + P+ ++Y L+ G+CK + A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 188 QLYDSMLRNGIMPDGLLLSTL 208
+ + M+ G PD + +T+
Sbjct: 400 EYLERMVSRGCYPDIVTYNTM 420
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 87/151 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ ++ A+++ QL+ +G P +ITYNT+I G + +A++L +++ LKP+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+IT++ L+ +EG++D+A F + G + N VT++ ++ G KS+ A D
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL 152
M PN SY+ILI+GL G+ +EAL
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
+ G +++ M+ G +++ + LI G+ + + A + E + + P+++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDN-HLLPDVVTYAILIRGYCKAGRPTEAMQLYDS 192
+Y+++I G CK G + AL LD + PDVVTY ++R C +G+ +AM++ D
Sbjct: 174 TYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 193 MLRNGIMPDGLLLSTLADYNLQSSG 217
ML+ PD + + L + + SG
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSG 254
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +E +D A+K F + G+ P+ +T+N+I+ G C + D A+ + KPN
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKG 92
++TILI+ EG +A + +++ KG
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 112/200 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ AL L ++ D G+ P++ YN +I C + EA LF+++ + L+PN
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ILID FC+ G++D A +M++ G K +V Y+ LI+G+ K ++ +A
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM + P +V+Y+ L+ G C +G + +AL +H + P + T+ L+ G +AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+A++L++ M + P+
Sbjct: 522 LIRDAVKLFNEMAEWNVKPN 541
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 106/193 (54%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
M + LD AL G++ D GL+ + YN++I G+C + A ++ +L+P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+T+T L+ +C +G+++ A ++ +M KG ++ T++ L+ G F++ ++ A ++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
EM E N+ PN V+Y+++I+G C+ G M +A + ++PD +Y LI G C
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 181 GRPTEAMQLYDSM 193
G+ +EA D +
Sbjct: 591 GQASEAKVFVDGL 603
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 35/242 (14%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ + A+ + L + L+PD++TY T++ G C + + +++ +++ C++ P+
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ L++ K G++++A + ++++ G N+ Y+ LID K + A +++
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEAL---------------YAFHCALDNH---- 162
M + + PN V+YSILID C+RG ++ AL Y ++ ++ H
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 163 ----------------LLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLS 206
L P VVTY L+ GYC G+ +A++LY M GI P +
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 207 TL 208
TL
Sbjct: 512 TL 513
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K H A++LF + G+ PD+ Y +I C L L A ++ + N
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + +LID CK+ ++ +A + + K K +VVTY L+ G K Q + ++ +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM SP+ + S L++GL KRG +EEAL +D + P++ Y LI CK
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 210
+ EA L+D M + G+ P+ + S L D
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILID 410
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 7 HLDAAL--KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
H D L L ++ DRGL+PD + Y ++I EA +++ + PN +T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEM 123
+T +I+ CK G +++A ++ SKM N VTY C +D K + +M+ A +++ +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ ++ N +Y++LI G C++G +EEA + + + PD +TY +I C+
Sbjct: 780 LKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
+A++L++SM GI PD + +TL
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTL 863
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+E + A + ++T++G+ PD +Y +I G C + EA + L + N I
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+T L+ FC+EG++++A + +M+++G ++V Y LIDG K ++ K F + +EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ + P+ V Y+ +ID K G +EA + ++ +P+ VTY +I G CKAG
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 184 TEAMQLYDSMLRNGIMPD 201
EA L M +P+
Sbjct: 734 NEAEVLCSKMQPVSSVPN 751
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 104/192 (54%), Gaps = 2/192 (1%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++ + + G P+ +TY +I G C ++EA L K+ V PN +T+ +D
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 71 AFCK-EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
K E M A + + +L KG AN TY+ LI G+ + ++ A ++ M + +S
Sbjct: 761 ILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 130 PNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQL 189
P+ ++Y+ +I+ LC+R +++A+ ++ + + PD V Y LI G C AG +A +L
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Query: 190 YDSMLRNGIMPD 201
+ MLR G++P+
Sbjct: 880 RNEMLRQGLIPN 891
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ AL+L+ ++T +G+ P I T+ T++ G + +AV+LF ++ +KPN +T+ +
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I+ +C+EG M A +M EKG + +Y LI G + A + + + N
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
N + Y+ L+ G C+ G +EEAL + + D+V Y +LI G K
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
L M G+ PD ++ +++ D ++ +E
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
++ ++ A +L ++ G+ PD ITY T+I C N + +A++L+ +T ++P+ +
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKG 92
+ LI C G M AT + ++ML +G
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + + A++L+ +T++G+ PD + YNT+I G C + +A +L ++ L PN
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Query: 62 SIT 64
+ T
Sbjct: 892 NKT 894
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 127 bits (318), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 114/202 (56%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +K+ +LD A +L+ ++ ++P+ +TYN+II G C RL +A + F+ + P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N +T+ LI FCK +D+ +F +M +G A++ TY+ LI GY + ++ A D++
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
M ++P+I+++ IL+ GLC G +E AL F ++ +V Y I+I G CKA
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Query: 181 GRPTEAMQLYDSMLRNGIMPDG 202
+ +A +L+ + G+ PD
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDA 456
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ AL+L ++ +GL D++TYNT++ G C R +A ++ + + P+
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TFT LID F K+G +D+A ++ +M++ N VTY+ +I+G + A ++
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M PN+V+Y+ LI G CK +++E + F D+ TY LI GYC+ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+ A+ ++ M+ + PD
Sbjct: 366 KLRVALDIFCWMVSRRVTPD 385
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A L + G EP+++ YNT+I G C L+ A++L ++ L + +T+ L+
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C GR DA M M+++ +VVT++ LID + K N+ A ++Y+EM ++++ P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
N V+Y+ +I+GLC G + +A F P+VVTY LI G+CK E M+L+
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 191 DSMLRNGIMPDGLLLSTL 208
M G D +TL
Sbjct: 340 QRMSCEGFNADIFTYNTL 357
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+ + A LF ++ P I+ + ++ +L R + + +K+ + +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+FTILI FC+ R+ A + KM++ G + ++VT+ L+ G+ + AF +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M ++ PN+V Y+ LIDGLCK G + AL + L DVVTY L+ G C +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 182 RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 220
R ++A ++ M++ I PD + + L D ++ E
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 102/189 (53%)
Query: 22 GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
G+ D+ ++ +I +C +RL A+ + K+ + +P+ +TF L+ FC R+ DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 82 TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDG 141
+ M++ G + NVV Y+ LIDG K+ + A ++ EM + + ++V+Y+ L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 142 LCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPD 201
LC G +A + + PDVVT+ LI + K G EA +LY M+++ + P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 202 GLLLSTLAD 210
+ +++ +
Sbjct: 281 NVTYNSIIN 289
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D +KLF +++ G DI TYNT+I GYC + +L A+ +F + ++ P+ IT I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ C G ++ A + F M E +V Y+ +I G K+ ++ A++++ +
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 128 ISPNIVSYSILIDGLCKRGLMEEA 151
+ P+ +Y+I+I GLCK G EA
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREA 475
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%)
Query: 36 GYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
G+ R ++A LF ++ Q P+ + FT L+ A R + KM G
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 96 NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAF 155
++ +++ LI + + + A V +M + P+IV++ L+ G C + +A
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 156 HCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 208
+ + P+VV Y LI G CK G A++L + M + G+ D + +TL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L AL +F + R + PDIIT+ ++ G C ++ A+ F+ + + + + I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I CK +++ A +F ++ +G K + TY+ +I G K+ + A ++ M E
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Query: 128 I 128
I
Sbjct: 487 I 487
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL 53
L K ++ A +LF +L G++PD TY +I G C EA +L ++
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 127 bits (318), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
L + R + P+ +TYNT+I G+ + ++ A QL ++ L PN +TF LID
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIV 133
EG +A MF M KG + V+Y L+DG K+ A Y M N + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 134 SYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSM 193
+Y+ +IDGLCK G ++EA+ + + + PD+VTY+ LI G+CK GR A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 194 LRNGIMPDGLLLSTL 208
R G+ P+G++ STL
Sbjct: 465 YRVGLSPNGIIYSTL 479
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 41/245 (16%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K LD A+ L +++ G++PDI+TY+ +I G+C + R A ++ ++ V L PN
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 62 SI-----------------------------------TFTILIDAFCKEGRMDDATMMFS 86
I TF +L+ + CK G++ +A
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
M G N V++ CLI+GY S AF V++EM + P +Y L+ GLCK G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592
Query: 147 LMEEALYAFHCALDNHLLP---DVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMPDGL 203
+ EA F +L H +P D V Y L+ CK+G +A+ L+ M++ I+PD
Sbjct: 593 HLREA-EKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 204 LLSTL 208
++L
Sbjct: 650 TYTSL 654
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
I E + ALK+F + +GL P ++Y ++ G C D A + ++ +
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
IT+T +ID CK G +D+A ++ ++M + G ++VTYS LI+G+ K K+A ++
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 123 MCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGR 182
+ +SPN + YS LI C+ G ++EA+ + + D T+ +L+ CKAG+
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 183 PTEAMQLYDSMLRNGIMPD 201
EA + M +GI+P+
Sbjct: 524 VAEAEEFMRCMTSDGILPN 542
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +L ++ GL P+ +T+N +I G+ S EA+++F + L P+ +++ +L+D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK D A + +M G +TY+ +IDG K+ + A + EM ++ I P
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 131 NIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLY 190
+IV+YS LI+G CK G + A L P+ + Y+ LI C+ G EA+++Y
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496
Query: 191 DSMLRNGIMPDGLLLSTLA 209
++M+ G D + L
Sbjct: 497 EAMILEGHTRDHFTFNVLV 515
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 3/210 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K HL A K L D + YNT++ C L +AV LF ++ + P+
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDV 119
S T+T LI C++G+ A ++F+K E N V Y+C +DG FK+ K+
Sbjct: 648 SYTYTSLISGLCRKGKTVIA-ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 706
Query: 120 YEEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCK 179
E+M +P+IV+ + +IDG + G +E+ + + P++ TY IL+ GY K
Sbjct: 707 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 766
Query: 180 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 209
+ + LY S++ NGI+PD L +L
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D A + ++ G+ ITY +I G C LDEAV L +++ + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI+ FCK GR A + ++ G N + YS LI + +K A +YE
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
M + + ++++L+ LCK G + EA C + +LP+ V++ LI GY +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 182 RPTEAMQLYDSMLRNGIMP 200
+A ++D M + G P
Sbjct: 558 EGLKAFSVFDEMTKVGHHP 576
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPN 61
K +L A+ LFG++ R + PD TY ++I G C + A+ LF K + + PN
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPN 683
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T +D K G+ +M G ++VT + +IDGY + ++ D+
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743
Query: 122 EMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAG 181
EM N PN+ +Y+IL+ G KR + + + + N +LPD +T L+ G C++
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 182 RPTEAMQLYDSMLRNGIMPD 201
+++ + + G+ D
Sbjct: 804 MLEIGLKILKAFICRGVEVD 823
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 17 QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
++ R + PD+ T+N +I C+ +++ L +K+ P +T+ ++ +CK+G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 77 RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
R A + M KG A+V TY+ LI +S + + + +M + I PN V+Y+
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRN 196
LI+G G + A + L L P+ VT+ LI G+ G EA++++ M
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362
Query: 197 GIMPDGLLLSTLAD 210
G+ P + L D
Sbjct: 363 GLTPSEVSYGVLLD 376
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 18 LTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGR 77
+T G+ P+ ++++ +I GY + +A +F+++T V P T+ L+ CK G
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593
Query: 78 MDDATMMFSKMLEKGPKA-NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
+ +A F K L P A + V Y+ L+ KS N+ A ++ EM + +I P+ +Y+
Sbjct: 594 LREAEK-FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652
Query: 137 ILIDGLCKRGLMEEA-LYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLR 195
LI GLC++G A L+A ++LP+ V Y + G KAG+ + + M
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 196 NGIMPDGLLLSTLAD 210
G PD + + + D
Sbjct: 713 LGHTPDIVTTNAMID 727
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L+ LK+ RG+E D T+N +I C+ ++ A L + +T + + + T
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
++ + R ++ M+ +M ++G Y LI+G + ++K+AF V EEM +
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 128 ISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAM 187
I P V+ S ++ L K G +EA L L+P + ++ L+ CK G EA+
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 188 QLYDSMLRNGIMPDGLLLSTLADYNLQSSG 217
+L M G+ D L YN+ +G
Sbjct: 985 ELRVVMSNCGLKLD------LVSYNVLITG 1008
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N + ILI + +EG + D+ +F M G +V T + ++ KS S +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 121 EEMCENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKA 180
+EM + I P++ +++ILI+ LC G E++ Y + P +VTY ++ YCK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 181 GRPTEAMQLYDSMLRNGIMPD 201
GR A++L D M G+ D
Sbjct: 242 GRFKAAIELLDHMKSKGVDAD 262
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K + + L+ + G+ PD +T ++++ G C N L+ +++ + C ++ +
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF +LI C G ++ A + M G + T ++ ++ + + V EM
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 124 CENNISPNIVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRP 183
+ ISP Y LI+GLC+ G ++ A + + + P V + ++R K G+
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945
Query: 184 TEAMQLYDSMLRNGIMPDGLLLSTL 208
EA L ML+ ++P +TL
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTL 970
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 82/160 (51%)
Query: 17 QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEG 76
+++ +G+ P+ Y +I G C + + A + E++ ++ P ++ + ++ A K G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 77 RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYS 136
+ D+AT++ ML+ + +++ L+ K+ N+ A ++ M + ++VSY+
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 137 ILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRG 176
+LI GLC +G M A + + L + TY LIRG
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P + + ++ + DEA L + ++L P +FT L+ CK G + +A +
Sbjct: 927 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCK 144
M G K ++V+Y+ LI G +M AF++YEEM + N +Y LI GL
Sbjct: 987 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1046
Query: 145 R 145
R
Sbjct: 1047 R 1047
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Query: 14 LFGQL--TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
+FG L T R + Y+ +I Y + +++++F + P+ T ++ +
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167
Query: 72 FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
K G +ML++ +V T++ LI+ + + + + ++M ++ +P
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227
Query: 132 IVSYSILIDGLCKRGLMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYD 191
IV+Y+ ++ CK+G + A+ + DV TY +LI C++ R + L
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 192 SMLRNGIMPDGLLLSTLAD 210
M + I P+ + +TL +
Sbjct: 288 DMRKRMIHPNEVTYNTLIN 306
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 35/234 (14%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+ K A + Q+ + G PDI+T N +I GY + ++++ L ++ PN
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753
Query: 62 SITFTILIDAFCKEGRMDDATMMF------------------------SKMLE------- 90
T+ IL+ + K + + +++ S MLE
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
Query: 91 ----KGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIVSYSILIDGLCKRG 146
+G + + T++ LI + + AFD+ + M IS + + ++ L +
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873
Query: 147 LMEEALYAFHCALDNHLLPDVVTYAILIRGYCKAGRPTEAMQLYDSMLRNGIMP 200
+E+ H + P+ Y LI G C+ G A + + M+ + I P
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A L + L P I ++ T++ C + EA++L ++ LK + +++ +L
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
I C +G M A ++ +M G AN TY LI G + S D+
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,422,600
Number of Sequences: 539616
Number of extensions: 3107686
Number of successful extensions: 14243
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 6668
Number of HSP's gapped (non-prelim): 3524
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)