BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027413
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY
PE=2 SV=1
Length = 320
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 154/208 (74%), Gaps = 31/208 (14%)
Query: 26 KAISKAIIPRSSLRQGTQKRKPKSLSMCFVTE------------DKNEGTTKVEKKTFVQ 73
K +SK++ RS KP+ L++CFV E D ++G +V K
Sbjct: 47 KLVSKSLRTRS---------KPR-LTVCFVLEEKELRGKLVVASDDDDGAGEVRK----- 91
Query: 74 AQNEIKFFSPAE---ERQARKRSERQTYLVAAIVSSLGISSMAVLAIHHRFSWQTEGCEL 130
Q E + + AE ++ ARK+SER TYLVAA++SS GI+SMAVL++++RFSWQ EG E+
Sbjct: 92 -QREKEISASAEKLAQKLARKKSERFTYLVAAVMSSFGITSMAVLSVYYRFSWQMEGGEI 150
Query: 131 QLLEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHKSHHKPRDGPFELNDIFAVIN 190
L EMFGTFALSVGAAVGMEFWARWAH ALWHASLWHMH+SHHKPR+GPFELNDIFA+IN
Sbjct: 151 PLSEMFGTFALSVGAAVGMEFWARWAHEALWHASLWHMHESHHKPREGPFELNDIFAIIN 210
Query: 191 AVPAIALLSYGFFHKGIVPGLCFGAVLA 218
AVPAIALLSYGFFHKG++PGLCFGA L
Sbjct: 211 AVPAIALLSYGFFHKGLIPGLCFGAGLG 238
>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 2 PE=2 SV=1
Length = 303
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 161/220 (73%), Gaps = 6/220 (2%)
Query: 1 MASGMSSANSSVVTYLLGRNTFFTGKAISKAIIPRSSLRQGTQKRKPKSLSMCFVTEDKN 60
MA+G+S+ +V L R++F IS A+ P S G ++RK L++CFV E++
Sbjct: 1 MAAGLSTI--AVTLKPLNRSSFSANHPISTAVFPPSLRFNGFRRRK--ILTVCFVVEERK 56
Query: 61 EGTTKVE--KKTFVQAQNEIKFFSPAEERQARKRSERQTYLVAAIVSSLGISSMAVLAIH 118
+ + + K + +EI S ++ +K+SER TYL+AA++SS GI+SMA++A++
Sbjct: 57 QSSPMDDDNKPESTTSSSEILMTSRLLKKAEKKKSERFTYLIAAVMSSFGITSMAIMAVY 116
Query: 119 HRFSWQTEGCELQLLEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHKSHHKPRDG 178
+RFSWQ +G E+ +LEMFGTFALSVGAAVGMEFWARWAHRALWH SLW+MH+SHHKPR+G
Sbjct: 117 YRFSWQMKGGEVSVLEMFGTFALSVGAAVGMEFWARWAHRALWHDSLWNMHESHHKPREG 176
Query: 179 PFELNDIFAVINAVPAIALLSYGFFHKGIVPGLCFGAVLA 218
FELND+FA+ NAVPAI LL YGF +KG+VPGLCFGA L
Sbjct: 177 AFELNDVFAITNAVPAIGLLYYGFLNKGLVPGLCFGAGLG 216
>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 1 PE=1 SV=1
Length = 310
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 160/223 (71%), Gaps = 10/223 (4%)
Query: 1 MASGMSSANSSVVTYLLGRNTFFTGKAISKAIIPRSSLRQGTQKRKPKSLSMCFVTEDK- 59
MA+G+S+A VT+ +F + + +P+S L + + K S+C+V E++
Sbjct: 1 MAAGLSTA----VTFKPLHRSFSSSSTDFRLRLPKS-LSGFSPSLRFKRFSVCYVVEERR 55
Query: 60 -NEGTTKVEKKTFVQAQNEIKFFSPA---EERQARKRSERQTYLVAAIVSSLGISSMAVL 115
N E+ + N I A E+ RK+SER TYL+AA++SS GI+SMAV+
Sbjct: 56 QNSPIENDERPESTSSTNAIDAEYLALRLAEKLERKKSERSTYLIAAMLSSFGITSMAVM 115
Query: 116 AIHHRFSWQTEGCELQLLEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHKSHHKP 175
A+++RFSWQ EG E+ +LEMFGTFALSVGAAVGMEFWARWAHRALWHASLW+MH+SHHKP
Sbjct: 116 AVYYRFSWQMEGGEISMLEMFGTFALSVGAAVGMEFWARWAHRALWHASLWNMHESHHKP 175
Query: 176 RDGPFELNDIFAVINAVPAIALLSYGFFHKGIVPGLCFGAVLA 218
R+GPFELND+FA++NA PAI LLSYGFF+KG+VPGLCFGA L
Sbjct: 176 REGPFELNDVFAIVNAGPAIGLLSYGFFNKGLVPGLCFGAGLG 218
>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum
annuum GN=CA2 PE=2 SV=1
Length = 316
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 142/177 (80%), Gaps = 4/177 (2%)
Query: 44 KRKPKSLSMCFVTEDKNEGTT--KVEKKTFVQAQNEIKFFSPAEERQARKRSERQTYLVA 101
+R+P S ++CFV ED T E+ ++ + +I AE + ARK+SER TYLVA
Sbjct: 59 RRRP-SFTVCFVLEDDKFKTQFEAGEEDIEMKIEEQISATRLAE-KLARKKSERFTYLVA 116
Query: 102 AIVSSLGISSMAVLAIHHRFSWQTEGCELQLLEMFGTFALSVGAAVGMEFWARWAHRALW 161
A++SS GI+SMAV+A+++RF WQ EG E+ EMFGTFALSVGAAVGMEFWARWAH+ALW
Sbjct: 117 AVMSSFGITSMAVMAVYYRFYWQMEGGEVPFSEMFGTFALSVGAAVGMEFWARWAHKALW 176
Query: 162 HASLWHMHKSHHKPRDGPFELNDIFAVINAVPAIALLSYGFFHKGIVPGLCFGAVLA 218
HASLWHMH+SHHKPR+GPFELND+FA+INAVPAIALL YGFFHKG++PGLCFGA L
Sbjct: 177 HASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLDYGFFHKGLIPGLCFGAGLG 233
>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum
GN=CA1 PE=1 SV=1
Length = 315
Score = 231 bits (589), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 144/183 (78%), Gaps = 10/183 (5%)
Query: 44 KRKPKSLSMCFVTEDKNEGTTKVEKKTFVQA-QNEIKFFSPAE--------ERQARKRSE 94
+RKP+ L+ CFV +D T + K++ +A +EI+ + E E+ ARK+SE
Sbjct: 50 RRKPR-LAACFVLKDDKLYTAQSGKQSDTEAIGDEIEVETNEEKSLAVRLAEKFARKKSE 108
Query: 95 RQTYLVAAIVSSLGISSMAVLAIHHRFSWQTEGCELQLLEMFGTFALSVGAAVGMEFWAR 154
R TYLVAA++SSLGI+SMAV+++++RFSWQ EG E+ EMF TFAL+ GAA+GME+WAR
Sbjct: 109 RFTYLVAAVMSSLGITSMAVISVYYRFSWQMEGGEMPFSEMFCTFALAFGAAIGMEYWAR 168
Query: 155 WAHRALWHASLWHMHKSHHKPRDGPFELNDIFAVINAVPAIALLSYGFFHKGIVPGLCFG 214
WAHRALWHASLWHMH+SHH+PR+GPFELNDIFA+INAVPAIA S+GF HKG++PG+CFG
Sbjct: 169 WAHRALWHASLWHMHESHHRPREGPFELNDIFAIINAVPAIAFFSFGFNHKGLIPGICFG 228
Query: 215 AVL 217
A L
Sbjct: 229 AGL 231
>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment)
OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1
Length = 322
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 97 TYLVAAIVSSLGISSMAVLAIHHRFSWQ-TEGCELQLLEMFGTFALSVGAAVGMEFWARW 155
+Y AAI +S+G+S +A+ A + RF+ T G + E+ GT L VG A+GME +AR+
Sbjct: 116 SYQAAAIAASIGVSGIAIFATYLRFAMHMTVGGAVPWGEVAGTLLLVVGGALGMEMYARY 175
Query: 156 AHRALWHASL--WHMHKSHHKPRDGPFELNDIFAVINAVPAIALLSYGFFHKGIVPGLCF 213
AH+A+WH S W +HKSHH PR GPFE ND+FA+IN +PA+ L ++GF+ ++ CF
Sbjct: 176 AHKAIWHESPLGWLLHKSHHTPRTGPFEANDLFAIINGLPAMLLCTFGFWLPNVLGAACF 235
Query: 214 GAVLASSF 221
GA L +
Sbjct: 236 GAGLGITL 243
>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1
Length = 176
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 145 AAVGMEFWARWAHRALWHASLWHMHKSHHKPRDGPFELNDIFAVINAVPAIALLSYG 201
+ + ME A + HR + H W H+SHH PR G FELND+FAV+ A AIAL++ G
Sbjct: 11 SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVG 67
>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1
Length = 175
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 147 VGMEFWARWAHRALWHASLWHMHKSHHKPRDGPFELNDIFAVINAVPAIALLSYG 201
+GME A AH+ + H W H SHH+PR G FE+ND++AV+ A +I L+ G
Sbjct: 15 IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG 69
>sp|P54973|CRTZ_PARSN Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC
01143) GN=crtZ PE=3 SV=1
Length = 162
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 138 TFALSVGAAVGMEFWARWAHRALWHASL-WHMHKSHHKPRDGPFELNDIFAVINAVPAIA 196
F + V + ME A HR + H L W HKSHH+ D E ND++ ++ AV A
Sbjct: 3 NFLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGLVFAVIATV 62
Query: 197 LLSYGFFHKGIVPGLCFG 214
L + G+ ++ + G
Sbjct: 63 LFTVGWIWAPVLWWIALG 80
>sp|Q44262|CRTZ_PARS1 Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ
PE=3 SV=1
Length = 162
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 139 FALSVGAAVGMEFWARWAHRALWHASL-WHMHKSHHKPRDGPFELNDIFAVINAVPAIAL 197
F + V + ME A HR + H L W HKSHH+ D E ND++ V+ AV A L
Sbjct: 4 FLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGVVFAVLATIL 63
Query: 198 LSYG 201
+ G
Sbjct: 64 FTVG 67
>sp|A1VE69|DXS_DESVV 1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio vulgaris
subsp. vulgaris (strain DP4) GN=dxs PE=3 SV=1
Length = 641
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 1 MASGMSSANSSVVTYLLGRNTFFTGKAISKAIIPRSSLRQGTQKRKPKSLSMCFVTEDKN 60
+A G SSA V+ L RN +GK I + +P + QGTQK SL +C
Sbjct: 572 LAGGFSSA---VLELLADRNAL-SGKHIRRIGLPDEFVEQGTQKELRVSLGLCM------ 621
Query: 61 EGTTKVEKKTFVQAQN 76
+G K K+ F N
Sbjct: 622 DGVGKALKELFAAVGN 637
>sp|Q72CD3|DXS_DESVH 1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio vulgaris
(strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dxs
PE=3 SV=1
Length = 641
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 1 MASGMSSANSSVVTYLLGRNTFFTGKAISKAIIPRSSLRQGTQKRKPKSLSMCFVTEDKN 60
+A G SSA V+ L RN +GK I + +P + QGTQK SL +C
Sbjct: 572 LAGGFSSA---VLELLADRNAL-SGKHIRRIGLPDEFVEQGTQKELRVSLGLCM------ 621
Query: 61 EGTTKVEKKTFVQAQN 76
+G K K+ F N
Sbjct: 622 DGVGKALKELFAAVGN 637
>sp|O13666|ERG32_SCHPO C-5 sterol desaturase erg32 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erg32 PE=3 SV=1
Length = 329
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 80 FFSPAEERQARKRSERQTYLVAAIVSSLGISSMAVLAIHHRFSW-----QTEGCELQLLE 134
+F E R+ K + Q +L +V+ + MA+L W + G L+
Sbjct: 90 YFDREEARRHPKFLKNQEHL-ELMVALKNLPGMAILTA----PWFLAEIRGYGYVYDKLD 144
Query: 135 MFGTFALSVGAAVGM---EFWARWAHRALWHASLW-HMHKSHHK 174
+G F L A+ + +F W HRAL H L+ +HK HHK
Sbjct: 145 EYGYFYLFFSIALFLLFSDFLIYWIHRALHHRWLYAPLHKLHHK 188
>sp|P0ABM4|CCMC_SHIFL Heme exporter protein C OS=Shigella flexneri GN=ccmC PE=3 SV=1
Length = 245
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 81 FSPAEERQARKRSERQTYL-VAAIVSSLGISSMAVLAIHHRFSWQTEGCELQLLEM---- 135
F+PA+ +Q S R YL V A + S+GI + +A WQ + L + M
Sbjct: 43 FAPADYQQGN--SYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIG 100
Query: 136 --FGTFALSVGAAVGMEFWARW 155
F AL G+A G W W
Sbjct: 101 AVFTFIALVTGSAWGKPMWGTW 122
>sp|P0ABM1|CCMC_ECOLI Heme exporter protein C OS=Escherichia coli (strain K12) GN=ccmC
PE=1 SV=1
Length = 245
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 81 FSPAEERQARKRSERQTYL-VAAIVSSLGISSMAVLAIHHRFSWQTEGCELQLLEM---- 135
F+PA+ +Q S R YL V A + S+GI + +A WQ + L + M
Sbjct: 43 FAPADYQQGN--SYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIG 100
Query: 136 --FGTFALSVGAAVGMEFWARW 155
F AL G+A G W W
Sbjct: 101 AVFTFIALVTGSAWGKPMWGTW 122
>sp|P0ABM2|CCMC_ECOL6 Heme exporter protein C OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=ccmC PE=3 SV=1
Length = 245
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 81 FSPAEERQARKRSERQTYL-VAAIVSSLGISSMAVLAIHHRFSWQTEGCELQLLEM---- 135
F+PA+ +Q S R YL V A + S+GI + +A WQ + L + M
Sbjct: 43 FAPADYQQGN--SYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIG 100
Query: 136 --FGTFALSVGAAVGMEFWARW 155
F AL G+A G W W
Sbjct: 101 AVFTFIALVTGSAWGKPMWGTW 122
>sp|P0ABM3|CCMC_ECO57 Heme exporter protein C OS=Escherichia coli O157:H7 GN=ccmC PE=3
SV=1
Length = 245
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 81 FSPAEERQARKRSERQTYL-VAAIVSSLGISSMAVLAIHHRFSWQTEGCELQLLEM---- 135
F+PA+ +Q S R YL V A + S+GI + +A WQ + L + M
Sbjct: 43 FAPADYQQGN--SYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIG 100
Query: 136 --FGTFALSVGAAVGMEFWARW 155
F AL G+A G W W
Sbjct: 101 AVFTFIALVTGSAWGKPMWGTW 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.132 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,363,771
Number of Sequences: 539616
Number of extensions: 2850358
Number of successful extensions: 7127
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7113
Number of HSP's gapped (non-prelim): 18
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)