BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027414
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBA6|PIS1_ARATH CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1
OS=Arabidopsis thaliana GN=PIS1 PE=1 SV=2
Length = 227
Score = 342 bits (877), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 190/218 (87%), Gaps = 5/218 (2%)
Query: 5 KKTAPRLRKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCA 64
KK PR KLSVYLYIPNI+GY+RVLLNC+AF +CFS+K +FSVLYF SF CDA+DGW A
Sbjct: 3 KKERPRPEKLSVYLYIPNIVGYMRVLLNCVAFAVCFSNKPLFSVLYFFSFCCDAVDGWVA 62
Query: 65 RKFNQVSTFGAVLDMVTDRISTACLLVILSQVYRPGLVFVSLLALDIGSHWLQMYSTFLT 124
R+FNQVSTFGAVLDMVTDR+STACLLVILSQ+YRP LVF+SLLALDI SHWLQMYSTFL
Sbjct: 63 RRFNQVSTFGAVLDMVTDRVSTACLLVILSQIYRPSLVFLSLLALDIASHWLQMYSTFLA 122
Query: 125 GKTNHKDVKDSTNWLFKAYYGNRMFMGYCCVACEVLYLILFLIAGKQSESLVDVVASTVR 184
GK++HKDVKDST+WLF+ YYGNR+FM YCCV+CEVLY+IL LIA QSE+L++VV +T+
Sbjct: 123 GKSSHKDVKDSTSWLFRLYYGNRIFMCYCCVSCEVLYIILLLIAKNQSENLLNVVVATLT 182
Query: 185 QGSPLSFLVALSLFGWAIKQTINVIQV-----TCTSYD 217
Q SPLSFL+AL+LFGW++KQTINVIQ+ C YD
Sbjct: 183 QISPLSFLLALTLFGWSMKQTINVIQMKTAADVCVLYD 220
>sp|Q8GUK6|PIS2_ARATH Probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
OS=Arabidopsis thaliana GN=PIS2 PE=2 SV=2
Length = 225
Score = 318 bits (816), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/213 (75%), Positives = 186/213 (87%), Gaps = 5/213 (2%)
Query: 10 RLRKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFNQ 69
R LSVYLYIPNI+GY+RVLLNCIAF +CFS+K +FS+LYF SF CDA+DGWCARKFNQ
Sbjct: 5 RPATLSVYLYIPNIVGYMRVLLNCIAFSVCFSNKTLFSLLYFFSFCCDAVDGWCARKFNQ 64
Query: 70 VSTFGAVLDMVTDRISTACLLVILSQVYRPGLVFVSLLALDIGSHWLQMYSTFLTGKTNH 129
VSTFGAVLDMVTDR+STACLLVILSQ+YRP LVF+SLLALDI SHWLQMYSTFL+GKT+H
Sbjct: 65 VSTFGAVLDMVTDRVSTACLLVILSQIYRPSLVFLSLLALDIASHWLQMYSTFLSGKTSH 124
Query: 130 KDVKDSTNWLFKAYYGNRMFMGYCCVACEVLYLILFLIAGKQSESLVDVVASTVRQGSPL 189
KDVKDST+WLF+ YYGNRMFMGYCCV+CEVLY+IL LIA Q+E+L++VV ++ Q SPL
Sbjct: 125 KDVKDSTSWLFRLYYGNRMFMGYCCVSCEVLYIILLLIATNQTENLMNVVVKSLMQISPL 184
Query: 190 SFLVALSLFGWAIKQTINVIQV-----TCTSYD 217
S L+ALS+FGW+IKQ INVIQ+ C YD
Sbjct: 185 SLLLALSIFGWSIKQIINVIQMKTAADVCVLYD 217
>sp|P06197|PIS_YEAST CDP-diacylglycerol--inositol 3-phosphatidyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PIS1 PE=1 SV=1
Length = 220
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 109/206 (52%), Gaps = 14/206 (6%)
Query: 7 TAPRLRKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARK 66
T ++ V YIPN IGYVRV+ ++F++ + F+ LY S + DA+DG ARK
Sbjct: 6 TPEKVTAEHVLWYIPNKIGYVRVITAALSFFVMKNHPTAFTWLYSTSCLLDALDGTMARK 65
Query: 67 FNQVSTFGAVLDMVTDRISTACLLVILSQVYRPGLVFVSL-LALDIGSHWLQMYSTFLTG 125
+NQVS+ GAVLDMVTDR STA L+ L Y VF L L LDI SH++ MY++ G
Sbjct: 66 YNQVSSLGAVLDMVTDRSSTAGLMCFLCVQYPQWCVFFQLMLGLDITSHYMHMYASLSAG 125
Query: 126 KTNHKDVKDSTNWLFKAYYGNRMFMGYCCVACEVLYLILFLIAGKQSESLVDVVASTVRQ 185
KT+HK V + + L YY R + C E+ Y L+L S +
Sbjct: 126 KTSHKSVGEGESRLLHLYYTRRDVLFTICAFNELFYAGLYLQLFSNSATFG--------- 176
Query: 186 GSPLSFLVALSLFGWAIKQTINVIQV 211
+ +S G+ KQT NV+Q+
Sbjct: 177 ----KWTTIISFPGYVFKQTANVVQL 198
>sp|Q10153|PIS_SCHPO CDP-diacylglycerol--inositol 3-phosphatidyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pis1 PE=3 SV=1
Length = 251
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 24 IGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFNQVSTFGAVLDMVTDR 83
+G+ RV L I+ Y +++Y S + DA DGW ARK +Q + FGA+LDMVTDR
Sbjct: 33 LGFTRVFLVLISLYFMSWHPNYCTIVYLYSSLLDAFDGWAARKLHQATNFGAILDMVTDR 92
Query: 84 ISTACLLVILSQVY-RPGLVFVSLLALDIGSHWLQMYSTFLTGKTNHKDVKDSTNWLFKA 142
+T+CLL L Y + ++F L++LD+ SH++ MYST G ++HK V NW+ +
Sbjct: 93 CATSCLLCFLCAAYPKYAIIFQLLVSLDLASHYMHMYSTLHQGASSHKTVTKKHNWMLRL 152
Query: 143 YYGNRMFMGYCCVACEVLYLILFLIA--GKQSESL--VDVVASTVRQGS-PLSFLVALSL 197
YYGN + C A E+ ++ L+L++ + L + V + G PLS+ L++
Sbjct: 153 YYGNNKVLFIFCAANEMFFVALYLLSFTPRTPPKLGYLPVPSFIYSTGELPLSYPTLLAV 212
Query: 198 FGWAI---KQTINVIQV 211
I KQ INV+Q+
Sbjct: 213 LCGPICLAKQIINVVQL 229
>sp|P70500|CDIPT_RAT CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus
norvegicus GN=Cdipt PE=1 SV=1
Length = 213
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
Query: 15 SVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFNQVSTFG 74
+++L++PN+IGY R++ I+FY S Y +S + DA DG AR NQ + FG
Sbjct: 5 NIFLFVPNLIGYARIVFAIISFYFMPCCPFTASSFYLLSGLLDAFDGHAARALNQGTRFG 64
Query: 75 AVLDMVTDRISTACLLVILSQVY-RPGLVFVSLLALDIGSHWLQMYSTFLTGKTNHKDVK 133
A+LDM+TDR +T CLLV L+ +Y R L+F ++LD+ SHWL ++S+ + G +HK +
Sbjct: 65 AMLDMLTDRCATMCLLVNLALLYPRATLLFQLSMSLDVASHWLHLHSSVVRGSESHKMID 124
Query: 134 DSTNWLFKAYYGNRMFMGYCCVACEVLYLILFL 166
S N + + YY +R + C E+ Y +L+L
Sbjct: 125 LSGNPVLRIYYTSRPALFTLCAGNELFYCLLYL 157
>sp|Q8VDP6|CDIPT_MOUSE CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Mus
musculus GN=Cdipt PE=1 SV=1
Length = 213
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
Query: 15 SVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFNQVSTFG 74
+++L++PN+IGY R++ I+FY S Y +S + DA DG AR NQ + FG
Sbjct: 5 NIFLFVPNLIGYARIVFAIISFYFMPCCPFTASSFYLLSGLLDAFDGHAARALNQGTRFG 64
Query: 75 AVLDMVTDRISTACLLVILSQVY-RPGLVFVSLLALDIGSHWLQMYSTFLTGKTNHKDVK 133
A+LDM+TDR +T CLLV L+ +Y R L+F ++LD+ SHWL ++S+ + G +HK +
Sbjct: 65 AMLDMLTDRCATMCLLVNLALLYPRATLLFQLSMSLDVASHWLHLHSSVVRGSESHKMID 124
Query: 134 DSTNWLFKAYYGNRMFMGYCCVACEVLYLILFL 166
S N + + YY +R + C E+ Y +L+L
Sbjct: 125 LSGNPVLRIYYTSRPALFTLCAGNELFYCLLYL 157
>sp|O14735|CDIPT_HUMAN CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Homo
sapiens GN=CDIPT PE=1 SV=1
Length = 213
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 15 SVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFNQVSTFG 74
+++L++PN+IGY R++ I+FY S Y +S + DA DG AR NQ + FG
Sbjct: 5 NIFLFVPNLIGYARIVFAIISFYFMPCCPLTASSFYLLSGLLDAFDGHAARALNQGTRFG 64
Query: 75 AVLDMVTDRISTACLLVILSQVYRPG--LVFVSLLALDIGSHWLQMYSTFLTGKTNHKDV 132
A+LDM+TDR ST CLLV L+ +Y PG L F ++LD+ SHWL ++S+ + G +HK +
Sbjct: 65 AMLDMLTDRCSTMCLLVNLALLY-PGATLFFQISMSLDVASHWLHLHSSVVRGSESHKMI 123
Query: 133 KDSTNWLFKAYYGNRMFMGYCCVACEVLYLILFL 166
S N + + YY +R + C E+ Y +L+L
Sbjct: 124 DLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYL 157
>sp|Q57N57|PGSA_SALCH CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Salmonella choleraesuis
(strain SC-B67) GN=pgsA PE=3 SV=3
Length = 182
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLLN---CIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL F+ + S L F I+ + D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFLVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q7CQB9|PGSA_SALTY CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=pgsA PE=3 SV=3
Length = 182
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL F+ + S L F I+ + D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q8XFD0|PGSA_SALTI CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Salmonella typhi GN=pgsA
PE=3 SV=3
Length = 182
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL F+ + S L F I+ + D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q5PI18|PGSA_SALPA CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=pgsA PE=3 SV=3
Length = 182
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL F+ + S L F I+ + D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|P44528|PGSA_HAEIN CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=pgsA
PE=3 SV=1
Length = 185
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCF-SDKRVFSVLYFISFVCDAIDGWCARKFNQVSTFGA 75
IP + RV+L IAFYL S + ++++FI+ V D +DG+ ARK+ Q + FGA
Sbjct: 5 IPIFLTIFRVILIPFFVIAFYLPIESSPFITTLIFFIAGVTDWLDGYLARKWKQTTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQ 95
LD V D++ LV++ +
Sbjct: 65 FLDPVADKVMVVAALVLIVE 84
>sp|Q7N5C8|PGSA_PHOLL CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=pgsA PE=3 SV=1
Length = 182
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCFS-DKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + R+ L +AFYL F+ V ++++ ++ D DG+ AR + Q + F
Sbjct: 3 LNIPTWLTLFRIALIPFFVLAFYLPFTWAPMVCAIIFIVAAATDWFDGFLARLWKQTTRF 62
Query: 74 GAVLDMVTDRISTACLLVILSQVYR 98
GA LD V D+I A LV++S+ Y
Sbjct: 63 GAFLDPVADKIMVAAALVLVSEHYH 87
>sp|O58215|Y460_PYRHO Uncharacterized protein PH0460 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0460 PE=3 SV=1
Length = 188
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 3 NVKKTAPRLRKLSVYLYI-PN---IIGYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDA 58
VK+ R+ K L I PN IIG++ LL FYL ++ + ++ + DA
Sbjct: 8 KVKQPLERIGKTLASLGITPNQLTIIGFLITLLASYEFYL--QNQILAGIILAVGAFLDA 65
Query: 59 IDGWCARKFNQVSTFGAVLDMVTDRISTACLL--VILSQVYRPGLVFVSLLA 108
+DG AR +VS FG LD DR+S A +L + L + R + F++L+
Sbjct: 66 LDGALARATGKVSKFGGFLDSTIDRLSDASILFGIALGGLVRWDVTFLTLIG 117
>sp|P45419|PGSA_PSEFL CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
OS=Pseudomonas fluorescens GN=pgsA PE=3 SV=1
Length = 195
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 20 IPNIIGYVRVLLNCI---AFYLCFS-DKRVFSVLYFISFVCDAIDGWCARKFNQVSTFGA 75
IPN+I +RVLL I FYL ++ S ++ + D +DG+ AR+ Q + FGA
Sbjct: 3 IPNLITVLRVLLIPIFILLFYLPYNWSYMAASSVFAFAAATDWLDGYLARRLEQSTPFGA 62
Query: 76 VLDMVTDRISTACLLVILSQVYRPGLVFVSLLALDIGSHWLQMYSTFLTGK 126
LD V D++ A LV+L Q + G+ WL + + + G+
Sbjct: 63 FLDPVADKLMVAVALVLLVQEH--------------GNLWLTLPAAVIIGR 99
>sp|A1JLU9|PGSA_YERE8 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=pgsA PE=3
SV=1
Length = 182
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCFS-DKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + RV+L +AFYL F V ++++ + D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDRISTACLLVILSQVYR 98
GA LD V D++ A LV++++ Y
Sbjct: 63 GAFLDPVADKVMVAIALVLVAEHYH 87
>sp|Q3Z2T6|PGSA_SHISS CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Shigella sonnei (strain
Ss046) GN=pgsA PE=3 SV=3
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q83R47|PGSA_SHIFL CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Shigella flexneri GN=pgsA
PE=3 SV=3
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q0T3L5|PGSA_SHIF8 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Shigella flexneri serotype
5b (strain 8401) GN=pgsA PE=3 SV=1
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q32HD9|PGSA_SHIDS CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=pgsA PE=3 SV=3
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q322L9|PGSA_SHIBS CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Shigella boydii serotype 4
(strain Sb227) GN=pgsA PE=3 SV=3
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q1RAM8|PGSA_ECOUT CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Escherichia coli (strain
UTI89 / UPEC) GN=pgsA PE=3 SV=1
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|P0ABF8|PGSA_ECOLI CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Escherichia coli (strain
K12) GN=pgsA PE=1 SV=2
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|P0ABF9|PGSA_ECOL6 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=pgsA PE=3 SV=2
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q0TGS6|PGSA_ECOL5 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=pgsA PE=3 SV=1
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|A1AC64|PGSA_ECOK1 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Escherichia coli O1:K1 /
APEC GN=pgsA PE=3 SV=1
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|P0ABG0|PGSA_ECO57 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Escherichia coli O157:H7
GN=pgsA PE=3 SV=2
Length = 182
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYF-ISFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV+L + FYL + + L F ++ V D DG+ AR++NQ + FGA
Sbjct: 5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGA 64
Query: 76 VLDMVTDRISTACLLVILSQVYR 98
LD V D++ A +V++++ Y
Sbjct: 65 FLDPVADKVLVAIAMVLVTEHYH 87
>sp|Q4UN77|PGSA_RICFE CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=pgsA PE=3 SV=1
Length = 181
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 3 NVKKTAPRLRKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFI-SFVCDAIDG 61
+ K P ++ + IP II +AFY+ S R L F+ + + D DG
Sbjct: 2 RIDKNLPNYLTIARIMVIPVII---------LAFYINNSLARKLGALLFVLASITDFFDG 52
Query: 62 WCARKFNQVSTFGAVLDMVTDRISTACLLVIL 93
+ ARK+N V++FG + D + D++ C++++L
Sbjct: 53 YIARKYNLVTSFGKMFDPIADKLLIGCVIIML 84
>sp|Q8D2N9|PGSA_WIGBR CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Wigglesworthia glossinidia
brevipalpis GN=pgsA PE=3 SV=1
Length = 182
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 34 IAFYLCFSDKRVFSVLYFI-SFVCDAIDGWCARKFNQVSTFGAVLDMVTDR 83
I FYL FS+ +S + FI + + D DG+ ARK NQ + FGA LD V D+
Sbjct: 22 IVFYLPFSNASFYSAIIFILAALTDWFDGFLARKLNQTTCFGAFLDPVADK 72
>sp|Q2NTS8|PGSA_SODGM CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Sodalis glossinidius
(strain morsitans) GN=pgsA PE=3 SV=1
Length = 182
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYFI-SFVCDAIDGWCARKFNQVSTF 73
L IP + RV++ +AFYL F + L F+ + V D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVMIPFFVLAFYLPFKWAPLCCALIFVLAAVTDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDRISTACLLVILSQVYR 98
GA LD V D++ A LV++++ +
Sbjct: 63 GAFLDPVADKVMVAMALVLVAEHFH 87
>sp|Q92JJ2|PGSA_RICCN CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=pgsA PE=3 SV=1
Length = 181
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 3 NVKKTAPRLRKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFI-SFVCDAIDG 61
+ K P ++ + IP II + FY+ S R L F+ + + D DG
Sbjct: 2 RIDKNLPNYLTIARIMVIPVII---------LVFYINNSLARTLGALLFVLASITDFFDG 52
Query: 62 WCARKFNQVSTFGAVLDMVTDRISTACLLVIL 93
+ ARK+N V++FG + D + D++ C++++L
Sbjct: 53 YIARKYNLVTSFGKMFDPIADKLLVGCVIIML 84
>sp|Q1RKM3|PGSA_RICBR CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Rickettsia bellii (strain
RML369-C) GN=pgsA PE=3 SV=1
Length = 181
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 12 RKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFI-SFVCDAIDGWCARKFNQV 70
L YL I I ++L FY+ R+ L F+ + + D DG+ ARK+N V
Sbjct: 5 ENLPNYLTIARIAAIPVIILT---FYINSPLARMLGALLFVLASITDFFDGYIARKYNLV 61
Query: 71 STFGAVLDMVTDRISTACLLVIL 93
++FG +LD + D++ C++++L
Sbjct: 62 TSFGKMLDPIADKLLVGCVIIML 84
>sp|Q68XS5|PGSA_RICTY CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=pgsA PE=3 SV=1
Length = 178
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 20 IPNIIGYVRVLLNCIAFYLCFSD----KRVFSVLYFISFVCDAIDGWCARKFNQVSTFGA 75
+PN + R+++ + L + + +++ ++L+ ++ + D DG+ ARK+N V++FG
Sbjct: 4 LPNYLTIARIMVIPVIILLFYINNSLARKLGALLFVLASITDFFDGYIARKYNLVTSFGK 63
Query: 76 VLDMVTDRISTACLLVIL 93
+ D + D++ C+ ++L
Sbjct: 64 MFDPIADKLLVGCVTIML 81
>sp|Q9ZE96|PGSA_RICPR CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Rickettsia prowazekii
(strain Madrid E) GN=pgsA PE=3 SV=1
Length = 181
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 20 IPNIIGYVRVLLNCIAFYLCFSD----KRVFSVLYFISFVCDAIDGWCARKFNQVSTFGA 75
+PN + R+++ + L + + +++ ++L+ ++ + D DG+ ARK+N V++FG
Sbjct: 7 LPNYLTIARIMVIPVIILLFYINNSLARKLGALLFVLASITDFFDGYIARKYNLVTSFGK 66
Query: 76 VLDMVTDRISTACLLVIL 93
+ D + D++ C+ ++L
Sbjct: 67 MFDPIADKLLVGCVTIML 84
>sp|Q492P7|PGSA_BLOPB CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Blochmannia pennsylvanicus
(strain BPEN) GN=pgsA PE=3 SV=1
Length = 183
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 20 IPNIIGYVRVLLN---CIAFYLCFS-DKRVFSVLYFISFVCDAIDGWCARKFNQVSTFGA 75
IP + +RV++ + FYL + ++++F++ V D DG+ AR++ Q ++FG
Sbjct: 6 IPTYLTLLRVVMVPFFTVMFYLPVRWAPMICTIMFFVAAVTDWFDGFLARRWKQTTSFGK 65
Query: 76 VLDMVTDRISTACLLVILSQ 95
LD V D++ LV++++
Sbjct: 66 FLDPVADKVMIVAALVLIAE 85
>sp|P46322|PGSA_BACSU CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Bacillus subtilis (strain
168) GN=pgsA PE=3 SV=3
Length = 193
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 47 SVLYFISFVCDAIDGWCARKFNQVSTFGAVLDMVTDRISTACLLVILSQ 95
++L+ I+ D +DG+ ARK N V+ FG LD + D++ + L+IL Q
Sbjct: 47 AILFIIASTTDWVDGYYARKLNLVTNFGKFLDPLADKLLVSAALIILVQ 95
>sp|Q7VR12|PGSA_BLOFL CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Blochmannia floridanus
GN=pgsA PE=3 SV=1
Length = 190
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 47 SVLYFISFVCDAIDGWCARKFNQVSTFGAVLDMVTDRISTACLLVILSQ 95
++++FI+ + D DG+ AR++NQ S G LD + D+I L+++S+
Sbjct: 41 TLIFFIAAITDWFDGFLARRWNQTSRIGGFLDPIADKIMIITALILISE 89
>sp|Q6D364|PGSA_ERWCT CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=pgsA
PE=3 SV=3
Length = 182
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 20 IPNIIGYVRVLL---NCIAFYLCFSDKRVFSVLYFI-SFVCDAIDGWCARKFNQVSTFGA 75
IP ++ RV L +AFYL F + L F+ + V D DG+ AR++ Q + FGA
Sbjct: 5 IPTLLTLFRVALIPFFVLAFYLPFVWAPLLCALIFVFAAVTDWFDGFLARRWKQTTRFGA 64
Query: 76 VLDMVTDR 83
LD V D+
Sbjct: 65 FLDPVADK 72
>sp|O13899|YF38_SCHPO Uncharacterized CDP-alcohol phosphatidyltransferase class-I family
protein C22A12.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC22A12.08c PE=3 SV=1
Length = 570
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 7 TAPRLRKLSVYLY-IPNIIGYVRVLLNCIAFYLCFSDKRVFSVLYFI-SFVCDAIDGWCA 64
+ P R L ++ +PN++ + R+L + YL D + +F+ + D +DG+ A
Sbjct: 387 SKPIQRPLRENIFTLPNLLTFSRLLSAPLIAYLYIYDYTKAAACFFLYAGFTDLVDGYIA 446
Query: 65 RKFNQVSTFGAVLDMVTDRISTACLLVILSQVYRPGLVFVSLL 107
RKF+ S G VLD + D+ CL + L+ L SL+
Sbjct: 447 RKFDLGSIAGTVLDPLADKTLMTCLTICLAVRETMPLTLASLI 489
>sp|Q3IYX7|PGSA_RHOS4 CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=pgsA PE=3 SV=1
Length = 221
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 20 IPNIIGYVRVL------LNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
IPNI+ +R+L + + F+ ++D + L+ ++ V D DG+ AR + Q S F
Sbjct: 5 IPNILTVLRLLAAPGVAVMFLYFHRPWADWFALT-LFILAAVTDFFDGYLARLWKQESKF 63
Query: 74 GAVLDMVTDRISTACLLVILS 94
GA+LD + D+ LVI++
Sbjct: 64 GAMLDPIADKAMVVIALVIIT 84
>sp|O66076|PGSA_TREPA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
OS=Treponema pallidum (strain Nichols) GN=pgsA PE=3 SV=1
Length = 216
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 47 SVLYFISFVC-DAIDGWCARKFNQVSTFGAVLDMVTDRIST-ACLLVILSQVYRPGLVFV 104
SVL F+ C D +DG+ ARK + S+FG V D D I+ +L +++ + P +F+
Sbjct: 45 SVLLFLFIACTDFLDGYYARKSGKYSSFGKVFDPFADVIANVTVMLCLVADNFMPVFLFL 104
Query: 105 SLLALDIGSHWLQM 118
+L + G +L+M
Sbjct: 105 CILYREFGMMFLRM 118
>sp|Q58609|PSS_METJA CDP-diacylglycerol--serine O-phosphatidyltransferase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=pssA
PE=3 SV=1
Length = 201
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 14/77 (18%)
Query: 10 RLRKLSVYLYIPNII-GYVRVLLNCIAFYLCFSDKRVFSVLYFISFVCDAIDGWCARKFN 68
++ +S Y+ + NII G + +LLN FS++Y +S + D++DG+ ARK
Sbjct: 6 KIITISDYVTMLNIITGLLAILLNS------------FSLIY-LSIIFDSLDGYVARKTG 52
Query: 69 QVSTFGAVLDMVTDRIS 85
VS FGA LD ++D +S
Sbjct: 53 TVSDFGAELDSISDVVS 69
>sp|Q66BN4|PGSA_YERPS CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=pgsA
PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCF-SDKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + RV+L +AFYL F V ++++ + D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDR 83
GA LD V D+
Sbjct: 63 GAFLDPVADK 72
>sp|A4TK40|PGSA_YERPP CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Yersinia pestis (strain
Pestoides F) GN=pgsA PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCF-SDKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + RV+L +AFYL F V ++++ + D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDR 83
GA LD V D+
Sbjct: 63 GAFLDPVADK 72
>sp|Q1CHE5|PGSA_YERPN CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=pgsA PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCF-SDKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + RV+L +AFYL F V ++++ + D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDR 83
GA LD V D+
Sbjct: 63 GAFLDPVADK 72
>sp|Q8ZF51|PGSA_YERPE CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Yersinia pestis GN=pgsA
PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCF-SDKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + RV+L +AFYL F V ++++ + D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDR 83
GA LD V D+
Sbjct: 63 GAFLDPVADK 72
>sp|Q1C8L0|PGSA_YERPA CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=pgsA PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 18 LYIPNIIGYVRVLL---NCIAFYLCF-SDKRVFSVLYFISFVCDAIDGWCARKFNQVSTF 73
L IP + RV+L +AFYL F V ++++ + D DG+ AR++ Q + F
Sbjct: 3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRF 62
Query: 74 GAVLDMVTDR 83
GA LD V D+
Sbjct: 63 GAFLDPVADK 72
>sp|Q07560|CRD1_YEAST Cardiolipin synthase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CRD1 PE=1 SV=1
Length = 283
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 3 NVKKTAPRLRKLSVYLYIPNIIGYVRVLLNCIAFYLCFSDKRVFSV---LYFISFVCDAI 59
N KT P ++ S L IPNI+ R+ C F F + L+ S + D +
Sbjct: 56 NPSKT-PHIK--SKLLNIPNILTLSRI--GCTPFIGLFIITNNLTPALGLFAFSSITDFM 110
Query: 60 DGWCARKFNQVSTFGAVLDMVTDRISTACLLVILSQVYRPGLVFVSLLALDIG 112
DG+ ARK+ + G +LD + D++ + LS P ++ VS+ A+ +G
Sbjct: 111 DGYIARKYGLKTIAGTILDPLADKLLMITTTLALSVPSGPQIIPVSIAAIILG 163
>sp|P63757|PGSA_STAAW CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Staphylococcus aureus
(strain MW2) GN=pgsA PE=3 SV=1
Length = 192
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 49 LYFISFVCDAIDGWCARKFNQVSTFGAVLDMVTDRISTACLLVILSQV 96
++ ++ + D +DG+ ARK+N V+ G LD + D++ A L++L Q+
Sbjct: 49 IFILASLSDFVDGYLARKWNLVTNMGKFLDPLADKLLVASALIVLVQL 96
>sp|Q6G9T0|PGSA_STAAS CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase OS=Staphylococcus aureus
(strain MSSA476) GN=pgsA PE=3 SV=1
Length = 192
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 49 LYFISFVCDAIDGWCARKFNQVSTFGAVLDMVTDRISTACLLVILSQV 96
++ ++ + D +DG+ ARK+N V+ G LD + D++ A L++L Q+
Sbjct: 49 IFILASLSDFVDGYLARKWNLVTNMGKFLDPLADKLLVASALIVLVQL 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.140 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,493,976
Number of Sequences: 539616
Number of extensions: 2686837
Number of successful extensions: 7184
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 7101
Number of HSP's gapped (non-prelim): 88
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)