RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 027416
(223 letters)
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative
II(PSI II), NYSGXRC, structural genomics; 1.79A
{Cytophaga hutchinsonii atcc 33406}
Length = 634
Score = 155 bits (395), Expect = 2e-44
Identities = 43/221 (19%), Positives = 86/221 (38%), Gaps = 39/221 (17%)
Query: 1 MIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQASCKTKISSVAVQYSLCQPFNL 60
+I + + S ++V ++ A + D+ ++
Sbjct: 244 LIQRNDRLSFKNVNLIYADIATDSAETPETVLTQD------------------------- 278
Query: 61 KMSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMC 120
E E L+DY+R+S + GF+L LSGGADSS+ A +V M
Sbjct: 279 -----------DLEKEFEFWEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMI 327
Query: 121 QLVVKEIANGNEQVKADAIRIG---RYANGEFPTESREFAKRIFYTVFMGSENSSQETRM 177
+ +KE+ K++ + + F ++++ T + + NS ET
Sbjct: 328 RKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQSTRNSGDETYT 387
Query: 178 RAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKV 218
AK LA+ IG+ + S+D + + + + + + ++
Sbjct: 388 SAKTLAESIGATFYNWSVDEEIEQYKATIENVIERPLTWEK 428
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase,
glutaminase, glutamine-dependent synthetase, ligase;
2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A*
3szg_A* 3dla_A* 3syt_A*
Length = 680
Score = 137 bits (346), Expect = 1e-37
Identities = 32/230 (13%), Positives = 65/230 (28%), Gaps = 43/230 (18%)
Query: 1 MIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQASCKTKISSVAVQYSL-CQPFN 59
++A+ +F + V VA VD + + R + +F + +++ + P
Sbjct: 257 LLAESERFP-KGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPA 315
Query: 60 LKMSLSGPLKITYHSP---------EEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSS 110
+ L ++ P E L LR ++ +SGG DS+
Sbjct: 316 GDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDST 375
Query: 111 SVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSEN 170
+ + ++ +
Sbjct: 376 HALIVATHAMDREGRPRSD-------------------------------ILAFALPGFA 404
Query: 171 SSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLF-QTLTGKRPRYKVT 219
+ + T+ A KLA +G ++ I L + Y VT
Sbjct: 405 TGEHTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVT 454
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide
alpha hydrolase-like, ATP- binding, ligase,
nucleotide-binding; HET: AMP; 1.85A {Francisella
tularensis subsp}
Length = 249
Score = 54.9 bits (133), Expect = 2e-09
Identities = 25/129 (19%), Positives = 41/129 (31%), Gaps = 38/129 (29%)
Query: 86 WLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYA 145
WL D A GF++ LSGG DS A+ +
Sbjct: 19 WLSDSCMNYPAEGFVIGLSGGIDS----AVAASLAVK-----TGLP-------------- 55
Query: 146 NGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSL 205
+ + S+N+ + A +L + + H +SI AFL+
Sbjct: 56 ---------------TTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQPAYEAFLAS 100
Query: 206 FQTLTGKRP 214
Q+ T +
Sbjct: 101 TQSFTNLQN 109
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for
structural genomics of infec diseases, NADE, CSGI; 2.74A
{Campylobacter jejuni}
Length = 249
Score = 53.7 bits (130), Expect = 5e-09
Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 37/127 (29%)
Query: 85 CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRY 144
++ + ++ S + G +L LSGG DS+ VA + A+
Sbjct: 15 DFIQEKVKNSQSQGVVLGLSGGIDSALVATLC-------------------KRAL----- 50
Query: 145 ANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLS 204
E + + + M ++ S++ A +L ++ + + I +++ AF+
Sbjct: 51 --KE----------NV-FALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIK 97
Query: 205 LFQTLTG 211
+ T
Sbjct: 98 QSENTTL 104
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics,
protein structure initiative, P nysgrc; 2.35A
{Streptomyces avermitilis}
Length = 590
Score = 51.2 bits (123), Expect = 7e-08
Identities = 43/207 (20%), Positives = 68/207 (32%), Gaps = 47/207 (22%)
Query: 1 MIAQGSQFSLRDVEVVVAQVDLDAVAGFRGSISSFQEQASCKTKISSVAVQYSLCQPFNL 60
++A+ QF VV +DL A + + IS +P
Sbjct: 242 VVARAPQF---SEGCVVLDLDLPAAEAEPPTGVVDDGLRIDRLVISE--------EPLPA 290
Query: 61 KMSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMC 120
+ +EE+ L Y+ ++G L+ LSGG DS+ VAAI
Sbjct: 291 YEAELAGGYADRLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAI--ACD 348
Query: 121 QLVVKEIANGNEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAK 180
L G + V V M S+ SS ++ A
Sbjct: 349 AL-------GAQNVYG---------------------------VSMPSKYSSDHSKGDAA 374
Query: 181 KLADEIGSWHLDVSIDTVVSAFLSLFQ 207
+LA G VSI+ + A+++
Sbjct: 375 ELARRTGLNFRTVSIEPMFDAYMASLG 401
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET:
DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB:
1xnh_A
Length = 268
Score = 50.3 bits (121), Expect = 9e-08
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 37/128 (28%)
Query: 86 WLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYA 145
+L +++ G + LSGG DS+ V +
Sbjct: 15 FLEKEVQKRGFKKVVYGLSGGLDSAVVGVLC-------------------QKV------- 48
Query: 146 NGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSL 205
F + + + M S S E + A L ++ + + SI + F S
Sbjct: 49 ----------FKENA-HALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAPYDAIFSSH 97
Query: 206 FQTLTGKR 213
F+ + R
Sbjct: 98 FKDASLTR 105
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase,
amidotransferase, ATP pyrophosphatase, NAD-adenylate;
HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB:
1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A
2pza_A* 2pz8_A
Length = 271
Score = 50.3 bits (121), Expect = 1e-07
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 32/131 (24%)
Query: 86 WLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYA 145
+L Y++++GA GF+L +SGG DS + G + QL A+ R
Sbjct: 28 FLKQYVKKTGAKGFVLGISGGQDS----TLAGRLAQL---------------AVESIREE 68
Query: 146 NGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIG-SWHLDVSIDTVVSAFLS 204
G+ F V + E A+ I I + VSAF
Sbjct: 69 GGDAQ----------FIAVRLPHGTQQDED--DAQLALKFIKPDKSWKFDIKSTVSAFSD 116
Query: 205 LFQTLTGKRPR 215
+Q TG +
Sbjct: 117 QYQQETGDQLT 127
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics,
NPPSFA, national project on Pro structural and
functional analyses; 2.10A {Pyrococcus horikoshii}
Length = 257
Score = 47.5 bits (114), Expect = 8e-07
Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 38/131 (29%)
Query: 85 CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRY 144
+ +++R G +G ++ +SGG DS++VA + K A G E+V
Sbjct: 11 ERILEFIREKGNNGVVIGISGGVDSATVAYL-------ATK--ALGKEKVLG-------- 53
Query: 145 ANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLS 204
+ M + AK +A+++G + ++I +V +F+
Sbjct: 54 -------------------LIMPY--FENKDVEDAKLVAEKLGIGYKVINIKPIVDSFVE 92
Query: 205 LFQTLTGKRPR 215
+ ++
Sbjct: 93 NLELNLDRKGL 103
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein
structure initiative; 2.20A {Burkholderia pseudomallei}
Length = 285
Score = 45.8 bits (109), Expect = 3e-06
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 30/122 (24%)
Query: 86 WLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYA 145
++ DYLR +G +L +SGG DS + G + QL V+ + +
Sbjct: 36 FVADYLRTAGLRACVLGISGGIDS----STAGRLAQLAVERLRASGYDAR---------- 81
Query: 146 NGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSL 205
F + + E + LA L V + A L+
Sbjct: 82 ---------------FVAMRLPYGAQHDEADA-RRALAFVRADETLTVDVKPAADAMLAA 125
Query: 206 FQ 207
Sbjct: 126 LA 127
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Length = 565
Score = 45.2 bits (107), Expect = 8e-06
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 36/142 (25%)
Query: 74 SPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQ 133
S E ++ + DY+ ++G G ++ LSGG DS+ V A+ A G E+
Sbjct: 278 SVEAQVYRALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVD---------ALGAER 328
Query: 134 VKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDV 193
V+A V M S ++ + A +A +G + ++
Sbjct: 329 VRA---------------------------VMMPSRYTAGISTTDAADMARRVGVRYDEI 361
Query: 194 SIDTVVSAFLSLFQTLTGKRPR 215
+I + AF +
Sbjct: 362 AIAPMFDAFRASLAAEFAGLAE 383
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid,
center for structural genomics O infectious diseases,
alpha beta; 2.40A {Vibrio cholerae}
Length = 279
Score = 43.2 bits (102), Expect = 3e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 86 WLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKE 126
++ L + +L +SGG DS G + QL V+E
Sbjct: 30 FIKRKLTEARYKSLVLGISGGVDS----TTCGRLAQLAVEE 66
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.0 bits (93), Expect = 4e-04
Identities = 40/226 (17%), Positives = 61/226 (26%), Gaps = 85/226 (37%)
Query: 4 QGSQF-----SLRDVEVVVAQV----D--LDAVAGFRGSISS------------FQEQAS 40
QGSQ L V D GF SI F +
Sbjct: 1624 QGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGF--SILDIVINNPVNLTIHFGGEKG 1681
Query: 41 CKTKISSVAVQYSLCQPFNLKM---------SLSGPLKITYHSPEE-------------- 77
+ + + A+ + LK + T+ S +
Sbjct: 1682 KRIRENYSAMIFETIVDGKLKTEKIFKEINEHST---SYTFRSEKGLLSATQFTQPALTL 1738
Query: 78 -EIAFGPGCWLWDYLRRSGASGFLLP---------------LSGGADS---SSVAAIV-- 116
E A ++ L+ G L+P L+ AD S+ +V
Sbjct: 1739 MEKA------AFEDLKSKG----LIPADATFAGHSLGEYAALASLADVMSIESLVEVVFY 1788
Query: 117 -GCMCQLVVKEIANGNEQVKADAIRIGRYANGEFPTES-REFAKRI 160
G Q+ V G AI GR A F E+ + +R+
Sbjct: 1789 RGMTMQVAVPRDELGRSNYGMIAINPGRVAAS-FSQEALQYVVERV 1833
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP;
1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A
1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Length = 275
Score = 38.9 bits (91), Expect = 6e-04
Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 31/124 (25%)
Query: 86 WLWDYLRRSG-ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRY 144
+L YL+ +L +SGG DS + G +CQ+ + E+
Sbjct: 29 FLKSYLQTYPFIKSLVLGISGGQDS----TLAGKLCQMAINELRLETGNESLQ------- 77
Query: 145 ANGEFPTESREFAKRIFYTVFM-GSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFL 203
F V + + ++ A L V+I V A
Sbjct: 78 ----------------FIAVRLPYGVQADEQDCQDAIAFIQPDRV--LTVNIKGAVLASE 119
Query: 204 SLFQ 207
+
Sbjct: 120 QALR 123
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam
synthetase, AS-B, class B asparagine synthetase,
AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP:
c.26.2.1 d.153.1.1 PDB: 1q19_A*
Length = 503
Score = 32.0 bits (73), Expect = 0.13
Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 26/121 (21%)
Query: 103 LSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYANGEFPTESREFAKRIFY 162
LSGG DSS V A+ + +++ + IG S++ A +
Sbjct: 245 LSGGLDSSLVTALA-----------SRHFKKLNTYS--IG-TELSNEFEFSQQVADAL-- 288
Query: 163 TVFMGSENSSQETRMRAKKLADEIGS--WHLDVSIDTVVSAFLSLFQTLTGKRPRYKVTM 220
G+ + Q + ++ + I ++ ++ LF ++ + +V+
Sbjct: 289 ----GTHH--QMKILSETEVINGIIESIYYNEIFDGLSAEIQSGLF--NVYRQAQGQVSC 340
Query: 221 V 221
+
Sbjct: 341 M 341
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC
AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC
CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1
d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Length = 513
Score = 31.2 bits (71), Expect = 0.28
Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 26/121 (21%)
Query: 103 LSGGADSSSVAAIVGCMCQLVVKEIANGNEQVKADAIRIGRYANGEFPTESREFAKRIFY 162
LSGG DSS VAA ++ ++ EF E+R +
Sbjct: 248 LSGGIDSSGVAACA-----------HRAAGELDTVSMGTDTSN--EFR-EARAVVDHL-- 291
Query: 163 TVFMGSENSSQETRMRAKKLADEIGS--WHLDVSIDTVVSAFLSLFQTLTGKRPRYKVTM 220
+ + +E + +L ++ W + ++ L L +
Sbjct: 292 ----RTRH--REITIPTTELLAQLPYAVWASESVDPDIIEYLLPLT--ALYRALDGPERR 343
Query: 221 V 221
+
Sbjct: 344 I 344
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding,
ATP binding, purine nucleotide biosynthetic pathway,
structural genomics; 2.10A {Thermus thermophilus} PDB:
2ywc_A*
Length = 503
Score = 28.2 bits (64), Expect = 2.2
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 100 LLPLSGGADSSSVAAIV 116
LL +SGG DSS++A ++
Sbjct: 213 LLAVSGGVDSSTLALLL 229
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B;
pyrococcus horikoshii OT3, structural genomics, NPPSFA;
1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Length = 308
Score = 27.9 bits (63), Expect = 2.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 LLPLSGGADSSSVAAIV 116
++ LSGG DSS+ A +
Sbjct: 24 IIALSGGVDSSTAAVLA 40
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella
burnetii}
Length = 527
Score = 28.2 bits (64), Expect = 2.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 LLPLSGGADSSSVAAIV 116
++ LSGG DS+ A +V
Sbjct: 234 IVGLSGGVDSAVTATLV 250
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase,
N-type ATP pyrophosphata transferase (glutamine
amidotransferase); HET: AMP CIT; 2.20A {Escherichia
coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Length = 525
Score = 27.8 bits (63), Expect = 2.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 100 LLPLSGGADSSSVAAIV 116
+L LSGG DSS A ++
Sbjct: 231 ILGLSGGVDSSVTAMLL 247
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene,
phosphoprotein, GMP synthetase, guanine monophosphate
synthetase, chromosomal rearrangement; HET: XMP; 2.5A
{Homo sapiens}
Length = 697
Score = 28.0 bits (63), Expect = 2.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 LLPLSGGADSSSVAAIV 116
L+ LSGG DS+ A++
Sbjct: 244 LVLLSGGVDSTVCTALL 260
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine
nucleotide biosy process, ligase; HET: XMP; 2.72A
{Plasmodium falciparum}
Length = 556
Score = 27.6 bits (62), Expect = 3.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 100 LLPLSGGADSSSVAAIV 116
+ +SGG DS+ AA
Sbjct: 259 IAAMSGGIDSTVAAAYT 275
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine
biosynthesis, transferase, glycosyltransferase, gluta
amidotransferase; HET: PIN; 2.00A {Escherichia coli}
SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A*
1ecj_A*
Length = 504
Score = 27.1 bits (61), Expect = 4.6
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 174 ETRMRA-KKLADEIGSWHLDVSIDTVV 199
R+ KL ++I D+ ID V+
Sbjct: 273 SARVNMGTKLGEKIAREWEDLDIDVVI 299
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric
sandwich hydrolase; 1.66A {Nesterenkonia SP}
Length = 283
Score = 27.2 bits (61), Expect = 4.8
Identities = 3/26 (11%), Positives = 8/26 (30%)
Query: 11 RDVEVVVAQVDLDAVAGFRGSISSFQ 36
+ ++V + + S Q
Sbjct: 247 VEPGLLVVDLPDQSQDAGSDSADYLQ 272
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.132 0.387
Gapped
Lambda K H
0.267 0.0648 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,349,111
Number of extensions: 192598
Number of successful extensions: 384
Number of sequences better than 10.0: 1
Number of HSP's gapped: 378
Number of HSP's successfully gapped: 30
Length of query: 223
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 133
Effective length of database: 4,188,903
Effective search space: 557124099
Effective search space used: 557124099
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.1 bits)