BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027419
(223 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IIR|A Chain A, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
pdb|3IIR|B Chain B, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
Length = 190
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 125/193 (64%), Gaps = 7/193 (3%)
Query: 31 EPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLIL 90
+PLLD+NGN VE++ Y++VS I CPLDVIQL + G +L
Sbjct: 1 DPLLDINGNVVEASRDYYLVSVIGGAGGGGLTLYRGRNELCPLDVIQLSPDLHKGTRLRF 60
Query: 91 SPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGA 150
+ Y+N++I+ E+ DLN++F S CNE +W+VDNYD S G+WFITTGG++G+PGA
Sbjct: 61 AAYNNTSIIHEAVDLNVKF----STETSCNEPTVWRVDNYDPSRGKWFITTGGVEGNPGA 116
Query: 151 ETLLNWFKLEKTNL-PGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAF 209
+TL NWFKLE+ G Y+IVHCPSVC+SCV LC+ VG S+ D RRL L +E F
Sbjct: 117 QTLKNWFKLERVGTDQGTYEIVHCPSVCKSCVFLCNDVG-VSY-DYRRRLALTAGNERVF 174
Query: 210 PVVLIPARERSTS 222
VV++PA E S S
Sbjct: 175 GVVIVPANEGSAS 187
>pdb|3S8J|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8J|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8K|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
pdb|3S8K|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
Length = 184
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 30 PEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXX-XXXXYCPLDVIQLPSAIQWGKKL 88
P+P++D++G V + Y +VSAIW CPL V+Q P G+ +
Sbjct: 3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDP--FDNGEPI 60
Query: 89 ILSPYDN--STIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
I S N IVRES DLN++F + + CNE WKVD + G W +T GG G
Sbjct: 61 IFSAIKNVKDNIVRESVDLNVKF----NITINCNETTAWKVDRFPGVIG-WTVTLGGEKG 115
Query: 147 HPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 204
+ G E+ + FK++K LP +YK CPS + + C++V F + +RRL+L D
Sbjct: 116 YHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 32 PLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXX--XXXYCPLDVIQLPSAIQWGK--- 86
P+LDV G +++ L Y I+S W C V + S +
Sbjct: 7 PVLDVTGKELDPRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPV 66
Query: 87 KLILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
+ I S + E LN++F +S SK C +WKV +YDAS G + TGG G
Sbjct: 67 RFIGSSSHFGQGIFEDELLNIQFA--ISTSKMCVSYTIWKVGDYDASLGTMLLETGGTIG 124
Query: 147 HPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDD 205
+ +WFK+ K++ G Y +++CP S + C VG ++G RRL LV+D+
Sbjct: 125 QADS----SWFKIVKSSQFG-YNLLYCPVTTSSDDQFCLKVG-VVHQNGKRRLALVKDN 177
>pdb|1R8N|A Chain A, The Crystal Structure Of The Kunitz (Sti) Type Inhibitor
From Seeds Of Delonix Regia
Length = 185
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 31 EPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLIL 90
E + D+ G V +Y+IVSAI CP+ +IQ S +Q G +
Sbjct: 4 EKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRF 63
Query: 91 S-PYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPG 149
S P + + T+L + FV C E W + SG + GG + HP
Sbjct: 64 SSPEEKQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQ 116
Query: 150 AETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAF 209
E + +FK+EK AYK+V CP +S CS +G ++E G R LVL D+ F
Sbjct: 117 GELVRGFFKIEKLGSL-AYKLVFCP---KSDSGSCSDIG-INYE-GRRSLVLKSSDDVPF 170
Query: 210 PVVLIPARERSTS 222
VV + R S +
Sbjct: 171 RVVFVKPRSGSET 183
>pdb|1AVA|C Chain C, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|1AVA|D Chain D, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|3BX1|D Chain D, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|C Chain C, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
Length = 181
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 30 PEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLI 89
P P+ D +G+++ + Y+++SA +CPL V Q P+ G +
Sbjct: 3 PPPVHDTDGHELRADANYYVLSAN-RAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPVR 61
Query: 90 LSPYD---NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
++PY + I+R STD+ + F + C + W +D+ + ++GR + TG +
Sbjct: 62 ITPYGVAPSDKIIRLSTDVRISFRAYTT----CLQSTEWHIDS-ELAAGRRHVITGPVKD 116
Query: 147 HPGAETLLNWFKLEKTNLPGA----YKIVHCPSVCE 178
P N F++EK + GA YK++ C C+
Sbjct: 117 -PSPSGRENAFRIEKYS--GAEVHEYKLMSCGDWCQ 149
>pdb|2IWT|B Chain B, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 189
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 30 PEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLI 89
P P+ D +G+++ + Y+++SA +CPL V Q P+ G +
Sbjct: 11 PPPVHDTDGHELRADANYYVLSAN-RAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPVR 69
Query: 90 LSPYD---NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
++PY + I+R STD+ + F + C + W +D+ + ++GR + TG +
Sbjct: 70 ITPYGVAPSDKIIRLSTDVRISFRAYTT----CLQSTEWHIDS-ELAAGRRHVITGPVKD 124
Query: 147 HPGAETLLNWFKLEK 161
P N F++EK
Sbjct: 125 -PSPSGRENAFRIEK 138
>pdb|1TIE|A Chain A, Crystal Structure Of A Kunitz-Type Trypsin Inhibitor From
Erythrina Caffra Seeds
Length = 172
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
LLD NG V++ Y+++ +W CPL V+Q P+ + GK + +
Sbjct: 2 LLDGNGEVVQNGGTYYLLPQVWAQGGGVQLAKTGEET-CPLTVVQSPNELSDGKPIRIES 60
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKV--DNYDASSGRWFITTGGLDGHPGA 150
S + + + + F + + +C P W V D + S + +P
Sbjct: 61 RLRSAFIPDDDKVRIGF----AYAPKCAPSPWWTVVEDEQEGLSVKLSEDESTQFDYP-- 114
Query: 151 ETLLNWFKLEK-TNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAF 209
FK E+ ++ +YK+++C E C +S+G + G RRLV+ D +
Sbjct: 115 ------FKFEQVSDQLHSYKLLYCEGKHEKC----ASIGINRDQKGYRRLVVTED----Y 160
Query: 210 PVVLIPARERST 221
P+ ++ ++ S+
Sbjct: 161 PLTVVLKKDESS 172
>pdb|2QN4|A Chain A, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
pdb|2QN4|B Chain B, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
Length = 200
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 27 SSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGK 86
S+ P P+ D G+++ + Y+++ A CPL V Q + G
Sbjct: 21 SAAPPPVYDTEGHELSADGSYYVLPA--SPGHGGGLTMAPRVLPCPLLVAQETDERRKGF 78
Query: 87 KLILSPYDNST-----IVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITT 141
+ +P+ + +R STD+ +RF + + C + W V + + R + T
Sbjct: 79 PVRFTPWGGAAAPEDRTIRVSTDVRIRF----NAATICVQSTEWHVGDEPLTGAR-RVVT 133
Query: 142 GGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCE 178
G L G P N F++EK G YK+V C C+
Sbjct: 134 GPLIG-PSPSGRENAFRVEKYG--GGYKLVSCRDSCQ 167
>pdb|3QYD|A Chain A, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|C Chain C, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|B Chain B, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
Length = 181
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Query: 27 SSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGK 86
S + + L+D GN VE+ Y+++ IW CPL V++ P+ + G+
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGE 60
Query: 87 KLILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
+ +S S + + + L F S C P W V D+ G L
Sbjct: 61 PIRISSRLRSAFIPRGSLVRLGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQ 110
Query: 147 HPGAETLLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 204
E + FK EK + YK+++C E VK +G +G RRLV+
Sbjct: 111 QKLPEKDIYVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT-- 167
Query: 205 DEPAFPVVLIPAR 217
+E +VL+ A+
Sbjct: 168 EENPLELVLLKAK 180
>pdb|3I29|B Chain B, Crystal Structure Of A Binary Complex Between An Mutant
Tryp Inhibitor With Bovine Trypsin
Length = 187
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 27 SSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGK 86
S + + L+D GN VE+ Y+++ IW CPL V++ P+ + G+
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGE 60
Query: 87 KLILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
+ +S S + + + L F S C P W V D+ G L
Sbjct: 61 PIRISSQYRSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQ 110
Query: 147 HPGAETLLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 204
E + FK EK + YK+++C E VK +G +G RRLV+
Sbjct: 111 QKLPEKDILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT-- 167
Query: 205 DEPAFPVVLIPARERSTS 222
+E +VL+ A+ + S
Sbjct: 168 EENPLELVLLKAKSETAS 185
>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
Length = 187
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 27 SSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGK 86
S + + L+D GN VE+ Y+++ IW CPL V++ P+ + G+
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGE 60
Query: 87 KLILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
+ +S S + + + L F S C P W V D+ G L
Sbjct: 61 PIRISSRLRSAFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQ 110
Query: 147 HPGAETLLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 204
E + FK EK + YK+++C E VK +G +G RRLV+
Sbjct: 111 QKLPEKDILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT-- 167
Query: 205 DEPAFPVVLIPARERSTS 222
+E +VL+ A+ + S
Sbjct: 168 EENPLELVLLKAKSETAS 185
>pdb|3I2A|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Protein
St Wci(S)
pdb|3I2A|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Protein
St Wci(S)
Length = 187
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 27 SSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGK 86
S + + L+D GN VE+ Y+++ IW CPL V++ P+ + G+
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGE 60
Query: 87 KL-ILSPYDNSTIVRESTDLNLRFVGL-LSGSKQCNELPLWKVDNYDASSGRWFITTGGL 144
+ I SPY I R S V L + C P W V D+ G L
Sbjct: 61 PIRISSPYRIRFIPRGS------LVALGFANPPSCAASPWWTV--VDSPQG----PAVKL 108
Query: 145 DGHPGAETLLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLV 202
E + FK EK + YK+++C E VK +G +G RRLV+
Sbjct: 109 SQQKLPEKDILVFKFEKVSHSNIHVYKLLYC-QHDEEDVKCDQYIGIHRDRNGNRRLVVT 167
Query: 203 RDDEPAFPVVLIPARERSTS 222
+E +VL+ A+ + S
Sbjct: 168 --EENPLELVLLKAKSETAS 185
>pdb|1XG6|A Chain A, The Crystal Structure Of The P1 Mutant (Leu To Arg)of A
Winged Bean Chymotrypsin Inhibitor(Kunitz)solved At
2.15a Resolution
Length = 187
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 27 SSVPEPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGK 86
S + + L+D GN VE+ Y+++ IW CPL V++ P+ + G+
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGE 60
Query: 87 KLILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDG 146
+ +S S + + + L F S C P W V D+ G L
Sbjct: 61 PIRISSQFRSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQ 110
Query: 147 HPGAETLLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 204
E + FK EK + YK+++C E VK +G +G RRLV+
Sbjct: 111 QKLPEKDILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT-- 167
Query: 205 DEPAFPVVLIPARERSTS 222
+E +VL+ A+ + S
Sbjct: 168 EENPLELVLLKAKSETAS 185
>pdb|1AVW|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Orthorhombic Crystal Form
pdb|1AVX|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Tetragonal Crystal Form
Length = 177
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 72/188 (38%), Gaps = 40/188 (21%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
+LD GN +E+ Y+I+S I CPL V+Q + + G I+S
Sbjct: 3 VLDNEGNPLENGGTYYILSDI--TAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISS 60
Query: 93 YDNSTIVRESTDLNLRF---------VGLLSGSKQCNELPLWKV----DNYDASSGRWFI 139
+ E L+L+F VG+ + +LP +N DA G
Sbjct: 61 PYRIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDG---- 116
Query: 140 TTGGLDGHPGAETLLNWFKLEKTNLP--GAYKIVHCPSVCESCVKLCSSVG-RFSFEDGV 196
WF+LE+ + YK+V CP E C +G +DG
Sbjct: 117 ----------------WFRLERVSDDEFNNYKLVFCPQQAED--DKCGDIGISIDHDDGT 158
Query: 197 RRLVLVRD 204
RRLV+ ++
Sbjct: 159 RRLVVSKN 166
>pdb|1BA7|A Chain A, Soybean Trypsin Inhibitor
pdb|1BA7|B Chain B, Soybean Trypsin Inhibitor
pdb|1AVU|A Chain A, Trypsin Inhibitor From Soybean (Sti)
Length = 181
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 72/188 (38%), Gaps = 40/188 (21%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
+LD GN +E+ Y+I+S I CPL V+Q + + G I+S
Sbjct: 3 VLDNEGNPLENGGTYYILSDI--TAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISS 60
Query: 93 YDNSTIVRESTDLNLRF---------VGLLSGSKQCNELPLWKV----DNYDASSGRWFI 139
+ E L+L+F VG+ + +LP +N DA G
Sbjct: 61 PYRIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDG---- 116
Query: 140 TTGGLDGHPGAETLLNWFKLEKTNLP--GAYKIVHCPSVCESCVKLCSSVG-RFSFEDGV 196
WF+LE+ + YK+V CP E C +G +DG
Sbjct: 117 ----------------WFRLERVSDDEFNNYKLVFCPQQAED--DKCGDIGISIDHDDGT 158
Query: 197 RRLVLVRD 204
RRLV+ ++
Sbjct: 159 RRLVVSKN 166
>pdb|2QYI|B Chain B, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|2QYI|D Chain D, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|3VEQ|A Chain A, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A
Engineered Mutant Trypsin Inhibitor
Length = 183
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE+ Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 4 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 62
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 63 QFRSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 112
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 113 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 169
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 170 LVLLKAKSETAS 181
>pdb|2ET2|A Chain A, Crystal Structure Of An Asn To Ala Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE+ Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVEAGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|2BEB|A Chain A, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
pdb|2BEB|B Chain B, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
Length = 186
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE+ Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVETGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|1EYL|A Chain A, Structure Of A Recombinant Winged Bean Chymotrypsin
Inhibitor
Length = 186
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE+ Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|2ESU|A Chain A, Crystal Structure Of Asn To Gln Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVEQGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|4WBC|A Chain A, 2.13 A Structure Of A Kunitz-Type Winged Bean Chymotrypsin
Inhibitor Protein
pdb|1WBC|A Chain A, Crystallization And Preliminary X-Ray Studies Of
Psophocarpin B1, A Chymotrypsin Inhibitor From Winged
Bean Seeds
pdb|2WBC|A Chain A, Refined Crystal Structure (2.3 Angstrom) Of A Winged Bean
Chymotrypsin Inhibitor And Location Of Its Second
Reactive Site
Length = 183
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE+ Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 4 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 62
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 63 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 112
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 113 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 169
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 170 LVLLKAKSETAS 181
>pdb|2BEA|A Chain A, Crystal Structure Of Asn14 To Gly Mutant Of Wci
pdb|2BEA|B Chain B, Crystal Structure Of Asn14 To Gly Mutant Of Wci
Length = 186
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVEGGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|1FN0|A Chain A, Structure Of A Mutant Winged Bean Chymotrypsin Inhibitor
Protein, N14d
Length = 186
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVEDGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|1FMZ|A Chain A, Crystal Structure Of A Mutant Winged Bean Chymotrypsin
Inhibitor Protein, N14k
Length = 186
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 33 LLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSP 92
L+D GN VE Y+++ IW CPL V++ P+ + G+ + +S
Sbjct: 7 LVDAEGNLVEKGGTYYLLPHIWAHGGGIETAKTGNEP-CPLTVVRSPNEVSKGEPIRISS 65
Query: 93 YDNSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAET 152
S + + + L F S C P W V D+ G L E
Sbjct: 66 QFLSLFIPRGSLVALGFANPPS----CAASPWWTV--VDSPQG----PAVKLSQQKLPEK 115
Query: 153 LLNWFKLEKTNLPG--AYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEPAFP 210
+ FK EK + YK+++C E VK +G +G RRLV+ +E
Sbjct: 116 DILVFKFEKVSHSNIHVYKLLYCQH-DEEDVKCDQYIGIHRDRNGNRRLVVT--EENPLE 172
Query: 211 VVLIPARERSTS 222
+VL+ A+ + S
Sbjct: 173 LVLLKAKSETAS 184
>pdb|3E8L|C Chain C, The Crystal Structure Of The Double-Headed Arrowhead
Protease Inhibitor A In Complex With Two Trypsins
Length = 185
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 140 TTGGLDGHP---GAETLLN---WFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFS 191
T GG+ P G LN WF+ T G YK+ C CE C C VG F+
Sbjct: 108 TNGGISFQPITAGDYFYLNNFSWFEARSTEETGVYKLAACS--CEFCKIACPEVGSFN 163
>pdb|2DRE|A Chain A, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|B Chain B, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|C Chain C, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|D Chain D, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
Length = 180
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 31 EPLLDVNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLIL 90
EP+ D NGN ++ +Y I A CPL +++ Q G + +
Sbjct: 5 EPVKDTNGNPLKIETRYFIQPASDNNGGGLVPANVDLSHLCPLGIVRTSLPYQPGLPVTI 64
Query: 91 SPYDNS--TIVRESTDLNLRFVGLLSGSKQCNELPLW-----KVDNYDASSGRWFITTGG 143
S +S V +T++ + F + P+W K D+SS +I TGG
Sbjct: 65 STPSSSEGNDVLTNTNIAITF-----------DAPIWLCPSSKTWTVDSSSEEKYIITGG 113
Query: 144 LDGHPGAETLLNWFKLEK-TNLPGAYKIVH 172
D G ++F++EK N YK+V
Sbjct: 114 -DPKSGE----SFFRIEKYGNGKNTYKLVR 138
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 137 WFITTGGLDGHPGAETLLNWFKLEK 161
W + GG GHPG LL+WF+ ++
Sbjct: 89 WKVGAGG--GHPGVIRLLDWFETQE 111
>pdb|4AN6|A Chain A, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
pdb|4AN6|B Chain B, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
Length = 185
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 71 CPLDVIQLPSAIQWGKKLILSPYDNSTIVRESTDLNLRFVGLLSGSKQCNELPL-WKVDN 129
CPL V Q P + G + S + + + LN+ F + + C P W++ N
Sbjct: 42 CPLTVSQTPIDLPIGLPVRFSSRARISHITTALSLNIEF----TIAPACAPKPARWRIFN 97
Query: 130 YDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGR 189
+S + D A + F+ + YK+V+C S ES + C +G
Sbjct: 98 EQSSEKGYTPVKISDDFSSAAPFQIKKFEED-------YKLVYC-SKSESGERKCVDLGI 149
Query: 190 FSFEDGVRRLVLVRDD 205
++ RRLVL D
Sbjct: 150 KIDDEKNRRLVLKEGD 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,323,677
Number of Sequences: 62578
Number of extensions: 245723
Number of successful extensions: 545
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 531
Number of HSP's gapped (non-prelim): 33
length of query: 223
length of database: 14,973,337
effective HSP length: 95
effective length of query: 128
effective length of database: 9,028,427
effective search space: 1155638656
effective search space used: 1155638656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)