Query 027423
Match_columns 223
No_of_seqs 27 out of 29
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 16:11:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027423.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027423hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jwg_A HEN1, methyltransferase 97.4 0.00024 8.3E-09 53.7 6.0 101 92-193 30-140 (219)
2 3h2b_A SAM-dependent methyltra 97.4 0.00031 1.1E-08 52.3 6.0 98 92-193 42-140 (203)
3 2p8j_A S-adenosylmethionine-de 97.4 0.00024 8.1E-09 52.8 5.3 114 77-193 11-127 (209)
4 3jwh_A HEN1; methyltransferase 97.3 0.00072 2.5E-08 51.2 7.1 101 92-195 30-142 (217)
5 3lcc_A Putative methyl chlorid 97.2 0.0011 3.7E-08 50.8 7.3 119 93-214 68-195 (235)
6 1xtp_A LMAJ004091AAA; SGPP, st 97.1 0.00034 1.2E-08 53.4 4.0 103 90-194 92-197 (254)
7 2xvm_A Tellurite resistance pr 97.1 0.00073 2.5E-08 49.4 5.4 99 93-194 34-136 (199)
8 3d2l_A SAM-dependent methyltra 97.1 0.00088 3E-08 50.6 5.9 97 93-193 35-136 (243)
9 3cgg_A SAM-dependent methyltra 97.1 0.00099 3.4E-08 48.0 5.9 100 91-194 46-147 (195)
10 3dtn_A Putative methyltransfer 97.1 0.0004 1.4E-08 52.8 3.6 100 91-193 44-147 (234)
11 3e23_A Uncharacterized protein 97.0 0.00074 2.5E-08 50.7 4.7 116 93-214 45-169 (211)
12 3ujc_A Phosphoethanolamine N-m 96.9 0.00066 2.3E-08 51.8 3.6 101 92-194 56-159 (266)
13 2ex4_A Adrenal gland protein A 96.8 0.00092 3.2E-08 51.5 4.1 101 92-193 80-184 (241)
14 2yqz_A Hypothetical protein TT 96.8 0.00085 2.9E-08 51.3 3.7 99 91-193 39-140 (263)
15 3m70_A Tellurite resistance pr 96.7 0.0022 7.6E-08 50.6 5.4 101 92-195 121-224 (286)
16 3pfg_A N-methyltransferase; N, 96.6 0.0039 1.3E-07 48.5 6.2 111 77-193 37-150 (263)
17 3bxo_A N,N-dimethyltransferase 96.6 0.0035 1.2E-07 47.2 5.8 109 79-193 29-140 (239)
18 3cc8_A Putative methyltransfer 96.5 0.0027 9.2E-08 47.0 4.5 97 90-193 31-129 (230)
19 3hnr_A Probable methyltransfer 96.5 0.0037 1.3E-07 46.8 5.3 98 91-193 45-144 (220)
20 3ofk_A Nodulation protein S; N 96.5 0.0037 1.3E-07 46.9 5.1 116 79-199 38-158 (216)
21 3i9f_A Putative type 11 methyl 96.5 0.0041 1.4E-07 44.9 5.1 114 92-214 18-138 (170)
22 3g5l_A Putative S-adenosylmeth 96.5 0.002 6.7E-08 49.7 3.6 108 81-193 33-144 (253)
23 1ve3_A Hypothetical protein PH 96.4 0.0047 1.6E-07 46.2 5.4 114 77-193 25-141 (227)
24 3sm3_A SAM-dependent methyltra 96.4 0.0027 9.2E-08 47.4 3.8 101 91-195 30-142 (235)
25 3g5t_A Trans-aconitate 3-methy 96.4 0.0062 2.1E-07 48.7 6.0 107 83-193 28-148 (299)
26 3dli_A Methyltransferase; PSI- 96.3 0.0025 8.5E-08 49.1 3.3 95 93-193 43-139 (240)
27 4gek_A TRNA (CMO5U34)-methyltr 96.3 0.0071 2.4E-07 49.5 6.2 116 75-193 54-177 (261)
28 3dlc_A Putative S-adenosyl-L-m 96.2 0.011 3.6E-07 43.5 6.3 111 81-194 33-148 (219)
29 1y8c_A S-adenosylmethionine-de 96.2 0.012 3.9E-07 44.2 6.5 103 88-193 34-141 (246)
30 2i62_A Nicotinamide N-methyltr 96.2 0.0075 2.6E-07 46.1 5.4 105 92-196 57-200 (265)
31 2avn_A Ubiquinone/menaquinone 96.2 0.0057 2E-07 47.9 4.9 105 81-194 45-152 (260)
32 1kpg_A CFA synthase;, cyclopro 96.2 0.0025 8.7E-08 50.1 2.8 98 92-193 65-167 (287)
33 3hm2_A Precorrin-6Y C5,15-meth 96.2 0.012 3.9E-07 42.4 6.0 99 91-195 25-128 (178)
34 1xxl_A YCGJ protein; structura 96.1 0.015 5E-07 45.1 6.8 110 80-193 10-123 (239)
35 3l8d_A Methyltransferase; stru 96.1 0.0054 1.8E-07 46.4 4.3 108 79-193 42-152 (242)
36 3f4k_A Putative methyltransfer 96.0 0.0056 1.9E-07 46.9 3.7 98 93-194 48-150 (257)
37 3vc1_A Geranyl diphosphate 2-C 95.9 0.0074 2.5E-07 48.8 4.4 99 92-194 118-221 (312)
38 3dh0_A SAM dependent methyltra 95.9 0.0079 2.7E-07 45.0 4.2 100 92-194 38-143 (219)
39 2pxx_A Uncharacterized protein 95.9 0.0038 1.3E-07 45.9 2.4 103 90-194 41-159 (215)
40 2gs9_A Hypothetical protein TT 95.9 0.011 3.7E-07 44.1 4.9 96 91-194 36-132 (211)
41 3ege_A Putative methyltransfer 95.8 0.019 6.5E-07 45.1 6.2 99 91-196 34-133 (261)
42 3g2m_A PCZA361.24; SAM-depende 95.8 0.011 3.7E-07 47.3 4.9 106 85-193 76-189 (299)
43 4htf_A S-adenosylmethionine-de 95.8 0.012 4.2E-07 46.3 5.1 102 86-193 63-172 (285)
44 1ri5_A MRNA capping enzyme; me 95.7 0.02 7E-07 44.4 6.1 104 86-193 59-173 (298)
45 2yxd_A Probable cobalt-precorr 95.7 0.0075 2.6E-07 43.1 3.4 93 92-194 36-131 (183)
46 3ou2_A SAM-dependent methyltra 95.7 0.012 4.1E-07 43.5 4.6 93 93-193 48-145 (218)
47 3bgv_A MRNA CAP guanine-N7 met 95.7 0.014 4.8E-07 47.1 5.2 107 91-198 34-158 (313)
48 3bkw_A MLL3908 protein, S-aden 95.6 0.017 5.7E-07 43.6 5.0 97 92-193 44-143 (243)
49 1vl5_A Unknown conserved prote 95.5 0.022 7.4E-07 44.2 5.6 99 91-193 37-139 (260)
50 2p7i_A Hypothetical protein; p 95.4 0.017 5.9E-07 43.0 4.4 95 93-194 44-141 (250)
51 3ccf_A Cyclopropane-fatty-acyl 95.1 0.024 8.3E-07 44.6 4.8 95 92-193 58-153 (279)
52 3bkx_A SAM-dependent methyltra 95.1 0.072 2.5E-06 41.3 7.4 101 91-193 43-158 (275)
53 2g72_A Phenylethanolamine N-me 95.1 0.059 2E-06 42.8 6.9 102 92-194 72-215 (289)
54 2o57_A Putative sarcosine dime 95.1 0.036 1.2E-06 43.8 5.6 100 91-193 82-186 (297)
55 1tw3_A COMT, carminomycin 4-O- 95.1 0.026 8.8E-07 46.3 4.9 109 82-193 173-287 (360)
56 3kkz_A Uncharacterized protein 95.0 0.022 7.4E-07 44.5 4.1 98 92-193 47-149 (267)
57 4hg2_A Methyltransferase type 95.0 0.05 1.7E-06 44.6 6.4 105 81-195 30-136 (257)
58 1dus_A MJ0882; hypothetical pr 94.8 0.026 9E-07 40.4 3.9 104 91-198 52-161 (194)
59 2fk8_A Methoxy mycolic acid sy 94.7 0.019 6.6E-07 46.1 3.2 98 92-193 91-193 (318)
60 3htx_A HEN1; HEN1, small RNA m 94.6 0.071 2.4E-06 53.8 7.6 105 91-197 721-836 (950)
61 3bus_A REBM, methyltransferase 94.5 0.088 3E-06 40.7 6.4 100 91-193 61-165 (273)
62 1wzn_A SAM-dependent methyltra 94.5 0.068 2.3E-06 40.9 5.7 99 91-192 41-143 (252)
63 3mgg_A Methyltransferase; NYSG 94.4 0.035 1.2E-06 43.2 3.9 99 92-193 38-141 (276)
64 1qzz_A RDMB, aclacinomycin-10- 94.1 0.056 1.9E-06 44.3 4.8 110 82-194 172-287 (374)
65 2r3s_A Uncharacterized protein 94.1 0.17 5.8E-06 40.6 7.5 107 82-193 153-270 (335)
66 2ip2_A Probable phenazine-spec 94.0 0.15 5.1E-06 41.3 7.0 109 81-193 157-271 (334)
67 3lbf_A Protein-L-isoaspartate 93.9 0.054 1.8E-06 40.5 3.9 103 91-203 77-183 (210)
68 2zfu_A Nucleomethylin, cerebra 93.8 0.091 3.1E-06 39.4 5.1 85 91-195 67-152 (215)
69 3gu3_A Methyltransferase; alph 93.8 0.052 1.8E-06 43.3 3.9 98 92-193 23-125 (284)
70 2kw5_A SLR1183 protein; struct 93.8 0.14 4.8E-06 37.8 6.0 97 94-194 32-131 (202)
71 3grz_A L11 mtase, ribosomal pr 93.6 0.082 2.8E-06 39.5 4.5 98 92-197 61-162 (205)
72 3dp7_A SAM-dependent methyltra 93.6 0.11 3.9E-06 43.4 5.8 106 82-193 170-286 (363)
73 1yzh_A TRNA (guanine-N(7)-)-me 93.5 0.15 5.1E-06 38.7 5.8 110 84-194 34-156 (214)
74 3thr_A Glycine N-methyltransfe 93.5 0.042 1.4E-06 43.1 2.9 100 92-193 58-174 (293)
75 3g07_A 7SK snRNA methylphospha 93.4 0.041 1.4E-06 44.6 2.8 123 92-214 47-242 (292)
76 1zx0_A Guanidinoacetate N-meth 93.4 0.068 2.3E-06 41.2 3.8 109 91-199 60-175 (236)
77 3p9n_A Possible methyltransfer 93.4 0.14 4.8E-06 38.0 5.4 114 80-194 33-153 (189)
78 1nkv_A Hypothetical protein YJ 93.3 0.074 2.5E-06 40.6 3.9 98 92-193 37-139 (256)
79 1jg1_A PIMT;, protein-L-isoasp 93.3 0.078 2.7E-06 41.0 4.0 97 93-198 93-194 (235)
80 3iv6_A Putative Zn-dependent a 93.2 0.084 2.9E-06 44.2 4.3 102 93-197 47-151 (261)
81 2yxe_A Protein-L-isoaspartate 93.1 0.11 3.7E-06 39.0 4.4 104 92-204 78-187 (215)
82 2p35_A Trans-aconitate 2-methy 93.0 0.12 4E-06 39.5 4.6 97 91-193 33-131 (259)
83 3m33_A Uncharacterized protein 93.0 0.32 1.1E-05 37.3 7.0 91 90-191 47-139 (226)
84 1p91_A Ribosomal RNA large sub 92.9 0.29 9.8E-06 38.0 6.7 92 90-193 84-177 (269)
85 1vlm_A SAM-dependent methyltra 92.8 0.41 1.4E-05 36.3 7.3 102 80-195 38-140 (219)
86 3e8s_A Putative SAM dependent 92.7 0.14 4.7E-06 37.7 4.4 94 93-193 54-151 (227)
87 4e2x_A TCAB9; kijanose, tetron 92.6 0.015 5E-07 49.0 -1.0 103 83-193 98-207 (416)
88 1ej0_A FTSJ; methyltransferase 92.6 0.082 2.8E-06 36.8 2.9 99 91-197 22-139 (180)
89 4fsd_A Arsenic methyltransfera 92.2 0.21 7.3E-06 42.2 5.6 102 91-194 83-203 (383)
90 3bzb_A Uncharacterized protein 91.9 0.26 8.8E-06 39.9 5.5 102 93-196 81-207 (281)
91 3i53_A O-methyltransferase; CO 91.8 0.29 1E-05 39.8 5.7 107 81-193 158-273 (332)
92 1vbf_A 231AA long hypothetical 91.7 0.37 1.3E-05 36.4 5.8 94 92-196 71-167 (231)
93 3hem_A Cyclopropane-fatty-acyl 91.6 0.19 6.6E-06 40.1 4.5 99 92-194 73-183 (302)
94 1fbn_A MJ fibrillarin homologu 91.3 0.12 4E-06 40.0 2.8 95 93-193 76-177 (230)
95 2fpo_A Methylase YHHF; structu 90.9 0.17 5.9E-06 38.6 3.4 104 93-199 56-165 (202)
96 3ocj_A Putative exported prote 90.7 0.34 1.2E-05 39.0 5.1 103 90-194 117-227 (305)
97 1ne2_A Hypothetical protein TA 90.7 0.37 1.3E-05 35.9 4.9 98 91-198 51-150 (200)
98 3mti_A RRNA methylase; SAM-dep 90.1 0.35 1.2E-05 35.3 4.3 101 93-199 24-140 (185)
99 2aot_A HMT, histamine N-methyl 89.8 0.22 7.7E-06 39.8 3.3 111 79-193 38-171 (292)
100 2ift_A Putative methylase HI07 89.8 0.16 5.3E-06 38.9 2.3 103 93-198 55-167 (201)
101 2esr_A Methyltransferase; stru 89.4 0.063 2.1E-06 39.1 -0.2 104 92-198 32-142 (177)
102 3ggd_A SAM-dependent methyltra 89.3 0.06 2.1E-06 41.2 -0.4 99 92-193 57-162 (245)
103 1x19_A CRTF-related protein; m 89.3 1.9 6.6E-05 35.4 8.6 107 81-193 179-294 (359)
104 1jsx_A Glucose-inhibited divis 89.0 0.53 1.8E-05 34.8 4.6 99 93-199 67-170 (207)
105 2a14_A Indolethylamine N-methy 89.0 0.37 1.3E-05 38.2 3.9 55 141-195 138-198 (263)
106 1r18_A Protein-L-isoaspartate( 88.9 0.36 1.2E-05 36.9 3.7 92 93-193 86-193 (227)
107 3lst_A CALO1 methyltransferase 88.8 0.52 1.8E-05 38.9 4.9 107 82-193 174-285 (348)
108 1inl_A Spermidine synthase; be 88.5 0.23 7.7E-06 41.2 2.5 118 75-196 77-208 (296)
109 1iy9_A Spermidine synthase; ro 88.4 0.28 9.6E-06 40.2 3.0 117 76-196 63-192 (275)
110 2gb4_A Thiopurine S-methyltran 88.1 0.35 1.2E-05 39.3 3.4 100 92-193 69-190 (252)
111 1pjz_A Thiopurine S-methyltran 87.8 0.25 8.4E-06 37.8 2.2 94 93-188 24-133 (203)
112 3dmg_A Probable ribosomal RNA 87.6 0.66 2.3E-05 40.3 5.0 122 74-197 216-343 (381)
113 1yb2_A Hypothetical protein TA 87.2 0.56 1.9E-05 37.3 4.0 96 93-197 112-214 (275)
114 2pjd_A Ribosomal RNA small sub 87.1 0.28 9.6E-06 40.8 2.3 100 93-195 198-304 (343)
115 1fp2_A Isoflavone O-methyltran 86.5 0.5 1.7E-05 39.0 3.4 94 91-193 188-287 (352)
116 3eey_A Putative rRNA methylase 86.2 1.3 4.4E-05 32.6 5.2 107 91-197 22-142 (197)
117 3adn_A Spermidine synthase; am 86.2 0.89 3E-05 38.1 4.9 124 69-196 64-201 (294)
118 3q87_B N6 adenine specific DNA 86.2 2 6.8E-05 31.8 6.3 92 93-194 25-123 (170)
119 1mjf_A Spermidine synthase; sp 86.1 0.12 4.3E-06 42.2 -0.4 114 76-196 63-196 (281)
120 2o07_A Spermidine synthase; st 86.0 0.26 8.8E-06 41.3 1.5 116 76-196 83-212 (304)
121 3gwz_A MMCR; methyltransferase 85.7 3.5 0.00012 34.5 8.3 108 80-193 190-306 (369)
122 1fp1_D Isoliquiritigenin 2'-O- 85.7 0.83 2.9E-05 38.1 4.4 104 81-193 197-305 (372)
123 1ws6_A Methyltransferase; stru 85.6 0.25 8.5E-06 35.0 1.1 103 92-199 42-152 (171)
124 2y1w_A Histone-arginine methyl 85.6 1.6 5.6E-05 36.5 6.2 95 93-193 52-154 (348)
125 2pt6_A Spermidine synthase; tr 85.3 0.29 1E-05 41.3 1.5 116 76-196 104-233 (321)
126 1l3i_A Precorrin-6Y methyltran 85.0 0.5 1.7E-05 33.6 2.4 98 91-195 33-135 (192)
127 3mcz_A O-methyltransferase; ad 84.8 1.4 4.8E-05 35.8 5.3 99 92-193 180-286 (352)
128 1uir_A Polyamine aminopropyltr 84.7 0.36 1.2E-05 40.3 1.8 117 75-197 64-199 (314)
129 2qe6_A Uncharacterized protein 84.5 2.1 7.2E-05 34.9 6.2 100 91-195 77-197 (274)
130 2bm8_A Cephalosporin hydroxyla 84.4 1.8 6.2E-05 34.3 5.7 92 93-193 83-186 (236)
131 1i1n_A Protein-L-isoaspartate 83.7 1.1 3.9E-05 33.7 4.0 96 92-196 78-184 (226)
132 3r0q_C Probable protein argini 83.2 1 3.6E-05 38.3 4.0 94 93-193 65-168 (376)
133 1o9g_A RRNA methyltransferase; 82.8 0.85 2.9E-05 35.5 3.1 106 91-196 51-216 (250)
134 3e05_A Precorrin-6Y C5,15-meth 82.7 2.4 8.2E-05 31.5 5.4 100 91-196 40-144 (204)
135 2vdw_A Vaccinia virus capping 82.2 0.77 2.6E-05 38.2 2.8 106 93-199 50-173 (302)
136 2nxc_A L11 mtase, ribosomal pr 82.2 0.84 2.9E-05 36.4 2.9 97 91-198 120-222 (254)
137 2pbf_A Protein-L-isoaspartate 81.5 0.75 2.6E-05 34.7 2.3 96 93-196 82-195 (227)
138 3dxy_A TRNA (guanine-N(7)-)-me 80.6 1.5 5E-05 34.5 3.8 111 84-197 27-153 (218)
139 1nt2_A Fibrillarin-like PRE-rR 80.4 1.3 4.3E-05 34.6 3.3 94 93-193 59-160 (210)
140 3q7e_A Protein arginine N-meth 80.4 1.7 5.7E-05 36.6 4.2 100 93-193 68-172 (349)
141 3tfw_A Putative O-methyltransf 80.1 1.6 5.5E-05 34.4 3.8 113 75-193 49-169 (248)
142 3mb5_A SAM-dependent methyltra 79.9 2.3 7.9E-05 32.6 4.6 94 92-194 94-194 (255)
143 3gdh_A Trimethylguanosine synt 79.7 1.4 4.9E-05 33.5 3.3 96 93-193 80-180 (241)
144 2ipx_A RRNA 2'-O-methyltransfe 79.5 1.2 4.2E-05 34.0 2.9 100 92-196 78-184 (233)
145 1i9g_A Hypothetical protein RV 79.4 1.6 5.5E-05 34.0 3.6 94 93-194 101-203 (280)
146 2pwy_A TRNA (adenine-N(1)-)-me 78.7 1.3 4.6E-05 33.6 2.9 96 91-194 96-198 (258)
147 2fca_A TRNA (guanine-N(7)-)-me 78.0 2.8 9.6E-05 32.2 4.5 107 84-194 31-153 (213)
148 2b25_A Hypothetical protein; s 77.6 2 7E-05 35.1 3.8 94 93-193 107-218 (336)
149 3ntv_A MW1564 protein; rossman 77.4 1 3.6E-05 34.9 2.0 97 92-192 72-174 (232)
150 3njr_A Precorrin-6Y methylase; 77.2 3.7 0.00013 31.5 5.0 96 92-196 56-156 (204)
151 2b3t_A Protein methyltransfera 76.9 2.7 9.4E-05 33.3 4.3 71 91-163 109-183 (276)
152 2yvl_A TRMI protein, hypotheti 76.6 6.5 0.00022 29.6 6.1 95 92-195 92-191 (248)
153 2b2c_A Spermidine synthase; be 76.5 1.5 5E-05 37.2 2.8 116 75-196 95-225 (314)
154 2fyt_A Protein arginine N-meth 76.3 3.8 0.00013 34.3 5.3 95 93-191 66-168 (340)
155 2fhp_A Methylase, putative; al 76.0 0.42 1.4E-05 34.4 -0.6 103 92-197 45-157 (187)
156 1zg3_A Isoflavanone 4'-O-methy 75.4 1.5 5.3E-05 36.1 2.6 94 91-193 193-292 (358)
157 1g8a_A Fibrillarin-like PRE-rR 75.4 1.6 5.3E-05 33.1 2.4 96 93-193 75-177 (227)
158 3opn_A Putative hemolysin; str 74.8 0.64 2.2E-05 37.3 0.1 93 93-196 39-139 (232)
159 3u81_A Catechol O-methyltransf 74.7 2.1 7.2E-05 32.6 3.0 106 92-199 59-177 (221)
160 1wy7_A Hypothetical protein PH 74.4 3 0.0001 30.9 3.7 90 92-185 50-141 (207)
161 2qm3_A Predicted methyltransfe 73.1 2.8 9.7E-05 35.4 3.7 95 92-193 173-277 (373)
162 1u2z_A Histone-lysine N-methyl 73.1 2.3 7.7E-05 38.4 3.3 100 91-193 242-358 (433)
163 3tr6_A O-methyltransferase; ce 72.9 1.4 4.8E-05 33.1 1.6 120 73-199 48-181 (225)
164 2ld4_A Anamorsin; methyltransf 72.4 1.9 6.4E-05 31.4 2.1 53 139-193 44-100 (176)
165 1g6q_1 HnRNP arginine N-methyl 71.7 7.6 0.00026 32.2 5.9 95 93-191 40-142 (328)
166 3orh_A Guanidinoacetate N-meth 71.0 7.6 0.00026 30.4 5.5 102 90-194 59-170 (236)
167 1uwv_A 23S rRNA (uracil-5-)-me 70.7 3.5 0.00012 35.8 3.8 99 93-199 288-394 (433)
168 3evz_A Methyltransferase; NYSG 70.4 4 0.00014 30.7 3.6 74 90-163 54-130 (230)
169 1o54_A SAM-dependent O-methylt 68.1 9.2 0.00031 30.1 5.4 93 93-194 114-213 (277)
170 2vdv_E TRNA (guanine-N(7)-)-me 65.6 4.9 0.00017 31.2 3.3 73 91-163 49-135 (246)
171 1dl5_A Protein-L-isoaspartate 63.3 8.2 0.00028 31.5 4.4 97 92-197 76-178 (317)
172 4dcm_A Ribosomal RNA large sub 62.7 7.2 0.00025 33.5 4.2 103 93-197 224-337 (375)
173 2yx1_A Hypothetical protein MJ 61.9 6.8 0.00023 32.8 3.8 91 93-195 197-292 (336)
174 1sui_A Caffeoyl-COA O-methyltr 60.7 6.5 0.00022 31.3 3.3 110 75-193 65-189 (247)
175 4dzr_A Protein-(glutamine-N5) 59.6 4.5 0.00015 29.3 2.0 73 90-162 29-107 (215)
176 3fpf_A Mtnas, putative unchara 58.0 16 0.00054 31.7 5.5 96 93-199 124-227 (298)
177 1xj5_A Spermidine synthase 1; 57.0 6.7 0.00023 33.5 2.9 117 75-196 107-238 (334)
178 3a27_A TYW2, uncharacterized p 56.8 7.8 0.00027 31.2 3.2 97 93-197 121-222 (272)
179 2i7c_A Spermidine synthase; tr 56.4 2.4 8.1E-05 34.7 0.0 113 75-193 65-191 (283)
180 2plw_A Ribosomal RNA methyltra 55.8 14 0.00048 27.0 4.1 96 92-195 23-155 (201)
181 3c3p_A Methyltransferase; NP_9 54.9 16 0.00056 27.2 4.4 96 92-193 57-159 (210)
182 3id6_C Fibrillarin-like rRNA/T 50.8 11 0.00039 30.8 3.2 97 93-196 78-183 (232)
183 2frn_A Hypothetical protein PH 50.8 13 0.00046 29.9 3.6 93 93-193 127-224 (278)
184 2gpy_A O-methyltransferase; st 50.7 5.1 0.00017 30.5 1.1 97 93-193 56-159 (233)
185 3ckk_A TRNA (guanine-N(7)-)-me 50.3 13 0.00043 29.5 3.4 101 89-193 44-167 (235)
186 1qam_A ERMC' methyltransferase 49.8 7.4 0.00025 31.0 2.0 74 93-171 32-108 (244)
187 3dr5_A Putative O-methyltransf 49.7 12 0.0004 29.3 3.1 116 74-193 38-162 (221)
188 3reo_A (ISO)eugenol O-methyltr 49.1 15 0.00051 30.8 3.8 104 82-193 192-299 (368)
189 3cbg_A O-methyltransferase; cy 48.7 20 0.00068 27.7 4.2 114 74-193 57-181 (232)
190 3c3y_A Pfomt, O-methyltransfer 48.6 8.3 0.00028 30.2 2.0 111 74-193 55-180 (237)
191 1xdz_A Methyltransferase GIDB; 48.1 12 0.00041 28.8 2.8 102 92-200 71-181 (240)
192 2jjq_A Uncharacterized RNA met 47.9 14 0.00048 32.5 3.6 95 92-199 291-392 (425)
193 1nv8_A HEMK protein; class I a 47.4 28 0.00097 28.4 5.1 67 93-162 125-198 (284)
194 3r3h_A O-methyltransferase, SA 46.1 8.7 0.0003 30.4 1.8 119 73-198 44-176 (242)
195 3mq2_A 16S rRNA methyltransfer 46.0 41 0.0014 24.9 5.4 101 91-193 27-139 (218)
196 2h1r_A Dimethyladenosine trans 45.1 17 0.00059 29.9 3.5 68 93-166 44-115 (299)
197 3duw_A OMT, O-methyltransferas 43.3 20 0.00068 26.8 3.3 113 74-193 43-166 (223)
198 2h2w_A Homoserine O-succinyltr 42.5 13 0.00045 32.4 2.5 46 169-217 92-141 (312)
199 3lcv_B Sisomicin-gentamicin re 42.3 32 0.0011 30.4 4.9 131 80-214 115-260 (281)
200 2cmg_A Spermidine synthase; tr 42.3 14 0.00049 30.1 2.6 108 75-197 59-175 (262)
201 3lpm_A Putative methyltransfer 41.5 13 0.00045 29.0 2.1 71 92-162 50-125 (259)
202 1yub_A Ermam, rRNA methyltrans 40.8 8.7 0.0003 30.1 1.0 68 92-164 30-100 (245)
203 3b3j_A Histone-arginine methyl 40.3 28 0.00095 31.2 4.3 94 93-192 160-261 (480)
204 1zq9_A Probable dimethyladenos 39.2 27 0.00092 28.4 3.8 66 92-162 29-99 (285)
205 3l5o_A Uncharacterized protein 39.0 10 0.00035 32.7 1.3 28 171-199 195-223 (270)
206 3hp7_A Hemolysin, putative; st 38.8 31 0.0011 29.4 4.3 97 93-196 87-187 (291)
207 2vdj_A Homoserine O-succinyltr 38.3 14 0.00048 31.9 2.0 46 169-217 80-129 (301)
208 3p9c_A Caffeic acid O-methyltr 36.8 48 0.0016 27.8 5.0 104 82-193 190-297 (364)
209 3bwc_A Spermidine synthase; SA 36.2 13 0.00046 30.5 1.5 101 92-193 96-209 (304)
210 2h00_A Methyltransferase 10 do 35.2 32 0.0011 26.4 3.4 71 93-163 67-147 (254)
211 3frh_A 16S rRNA methylase; met 34.5 47 0.0016 28.8 4.7 124 81-213 90-229 (253)
212 1af7_A Chemotaxis receptor met 33.5 24 0.00083 29.3 2.7 42 154-195 211-252 (274)
213 3gjy_A Spermidine synthase; AP 33.3 7.3 0.00025 33.8 -0.5 97 94-193 92-199 (317)
214 2nyu_A Putative ribosomal RNA 32.4 25 0.00087 25.4 2.3 96 93-196 24-147 (196)
215 2hnk_A SAM-dependent O-methylt 29.9 13 0.00046 28.4 0.5 97 92-193 61-180 (239)
216 1sqg_A SUN protein, FMU protei 29.4 25 0.00085 30.3 2.1 70 93-162 248-321 (429)
217 1uf3_A Hypothetical protein TT 28.7 37 0.0013 24.8 2.7 25 159-183 36-61 (228)
218 2pe4_A Hyaluronidase-1; hyalur 28.0 19 0.00067 33.5 1.3 50 140-194 250-304 (424)
219 2jwa_A Receptor tyrosine-prote 28.0 32 0.0011 23.0 2.0 16 29-44 7-22 (44)
220 1ixk_A Methyltransferase; open 26.4 40 0.0014 27.8 2.8 100 93-193 120-245 (315)
221 3g89_A Ribosomal RNA small sub 26.2 47 0.0016 26.4 3.1 106 92-204 81-195 (249)
222 2b78_A Hypothetical protein SM 26.1 18 0.00062 30.9 0.7 106 93-199 214-336 (385)
223 2avd_A Catechol-O-methyltransf 24.7 31 0.0011 25.7 1.6 110 74-193 54-178 (229)
224 4fx0_A Probable transcriptiona 24.3 18 0.00062 26.5 0.3 66 76-145 10-86 (148)
225 2yxl_A PH0851 protein, 450AA l 24.3 47 0.0016 28.9 2.9 67 93-162 261-336 (450)
226 2ozv_A Hypothetical protein AT 24.2 34 0.0012 27.1 1.9 72 92-163 37-122 (260)
227 3ftd_A Dimethyladenosine trans 23.7 78 0.0027 25.5 4.0 31 92-122 32-62 (249)
228 2j0p_A HEMS, hemin transport p 23.4 14 0.00049 33.0 -0.5 59 86-147 130-196 (345)
229 1sw5_A Osmoprotection protein 23.3 1.2E+02 0.004 24.2 4.9 61 79-151 151-212 (275)
230 3lor_A Thiol-disulfide isomera 22.5 1.1E+02 0.0039 20.9 4.1 34 169-202 112-147 (160)
231 2h1q_A Hypothetical protein; Z 21.8 29 0.001 29.7 1.1 28 172-199 196-224 (270)
232 2vz8_A Fatty acid synthase; tr 21.3 27 0.00094 37.7 1.0 95 94-193 1243-1347(2512)
233 3fzg_A 16S rRNA methylase; met 20.3 71 0.0024 26.7 3.1 127 81-213 33-175 (200)
234 1iij_A ERBB-2 receptor protein 20.0 22 0.00074 23.0 -0.0 21 29-50 3-23 (35)
No 1
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.43 E-value=0.00024 Score=53.67 Aligned_cols=101 Identities=19% Similarity=0.183 Sum_probs=71.3
Q ss_pred cceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhh------hhcceeeeeecCCCCCCCCCccEEEe
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSFPLVIV 162 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLPYR~kSFSlVIV 162 (223)
-.+||.+|-.+......|.+... .+.+|||+.+ ++.+..+++..- .+=-+..+|+ ..+|....+|++|+.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAATV 108 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEEE
Confidence 45999999999999888887654 6889998753 222333322110 0223455677 346777789999999
Q ss_pred cccccccChhhhccccccchhhccC-ceEEEe
Q 027423 163 SDALDYLSPKYLNKTLPDLARVASD-GVLIFA 193 (223)
Q Consensus 163 SDaLDyLspryLNkTLPeLaRvsad-glViF~ 193 (223)
++++.|+++..+.+.|-++.|+-.. |++|++
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 109 IEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 9999999988888889999888665 544444
No 2
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.39 E-value=0.00031 Score=52.27 Aligned_cols=98 Identities=18% Similarity=0.151 Sum_probs=72.1
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLsp 171 (223)
-.+||.+|-.+......|.+. ..+..|||+.+ +.-..++....+--+..+|+. .+|+...+|++|+..+++.++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPAT--RLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCH--HHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCCH
Confidence 468999999999887777766 56889998753 222233332223335566764 46777899999999999999998
Q ss_pred hhhccccccchhhcc-CceEEEe
Q 027423 172 KYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~ 193 (223)
..+.+.|-++.|+-. +|.++++
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEE
Confidence 889999999999866 5566655
No 3
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.38 E-value=0.00024 Score=52.77 Aligned_cols=114 Identities=17% Similarity=0.271 Sum_probs=79.6
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCC
Q 027423 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 154 (223)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~ 154 (223)
+.+.+-.+.+.- .-.+||.+|..+......++.+...+..|||+.+ ++-+..+++..-.+--+..+|+. .+|+..
T Consensus 11 ~~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 87 (209)
T 2p8j_A 11 LYRFLKYCNESN--LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKD 87 (209)
T ss_dssp HHHHHHHHHHSS--SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCT
T ss_pred HHHHHHHHhccC--CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCC
Confidence 445555554332 2358999999988876667677777888888754 33344444332122235567775 467778
Q ss_pred CCccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 155 kSFSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
.+|++|+.++.+.|+++....+.|.++.|+-. +|.++++
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 89999999999999998889999999998755 5676665
No 4
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.28 E-value=0.00072 Score=51.17 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=71.4
Q ss_pred cceeeeecCCcchhhhhcccccc-ccccccccccccchhHHHHhhhh----------hcceeeeeecCCCCCCCCCccEE
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLV 160 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPydiedad~~CKsLVr----------KGiVRvADIkfpLPYR~kSFSlV 160 (223)
-.+||.+|..+......|.+... .+..|||+.+ ++-..++...+ +--+..+|+. -+|....+|++|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v 106 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSY--RSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAA 106 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCH--HHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCH--HHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEE
Confidence 35999999999999888887643 6888988753 22223332221 2234456763 345566899999
Q ss_pred EecccccccChhhhccccccchhhcc-CceEEEeec
Q 027423 161 IVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGI 195 (223)
Q Consensus 161 IVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~ 195 (223)
+..+++.|+++..+.+.|-++.|+-. +|++|++-+
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 99999999998888899999998755 566665533
No 5
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.19 E-value=0.0011 Score=50.79 Aligned_cols=119 Identities=17% Similarity=0.109 Sum_probs=81.9
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh--hhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS--LVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs--LVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||-+|..+......|.+ ...+..||++.+ ++-+..+++. +..+=-+..+|+.-..| ..+|++|+.+.++.+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEChhhhc
Confidence 4999999999988877765 456788887653 3344444433 11222355677765333 449999999999999
Q ss_pred cChhhhccccccchhh-ccCceEEEeecCcchhh----ccccchhHHHHHH
Q 027423 169 LSPKYLNKTLPDLARV-ASDGVLIFAGISSMFHL----MKFSSDTWTEIHA 214 (223)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~P~q~~L----~kfssswW~r~~~ 214 (223)
+.|....+.|-++.|+ ..+|.+++..++..... -.++...|.+.+.
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV 195 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHH
Confidence 9999999999999994 66788888776654311 1135566666554
No 6
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.14 E-value=0.00034 Score=53.40 Aligned_cols=103 Identities=16% Similarity=0.268 Sum_probs=74.8
Q ss_pred cccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
..-.+||.||-.+......|++....+..|||+-+ ++-+..+++.. .+--+..+|+. .+|+...+|++|+.++.|.
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASME-TATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGG-GCCCCSSCEEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHH-HCCCCCCCeEEEEEcchhh
Confidence 34568999999999988888877666678887642 33344444332 12234456664 3677788999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEee
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~G 194 (223)
|+++..+.+.|-++.|+-. +|.++++-
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9998888899999998765 57777764
No 7
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.12 E-value=0.00073 Score=49.39 Aligned_cols=99 Identities=14% Similarity=0.188 Sum_probs=69.4
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.+||.+|..+-.....|.+. ..+..|||+.+ ++.+..+.+..-- .--+..+|+.- +|+ ..+|++|+.++.+.|+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLMFL 110 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGGGS
T ss_pred CeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhhhC
Confidence 49999999998887777766 56788887643 3334433332111 11244566643 556 8899999999999999
Q ss_pred Chhhhccccccchhhc-cCceEEEee
Q 027423 170 SPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~G 194 (223)
++..+.+.|-++.|+- .+|.+++..
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9988889999998875 467755543
No 8
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.11 E-value=0.00088 Score=50.62 Aligned_cols=97 Identities=22% Similarity=0.335 Sum_probs=66.3
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec-cccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVS-DaLDyL 169 (223)
.+||.+|..+......|.+. .+..|||+.+ ++-+..+++..-.+--+..+|+. .+|.. .+|++|+.. |.+.|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCCCS-SCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcCCC-CCcCEEEEeCCchhhc
Confidence 68999999998877777766 7888988753 33344443322112234456663 23333 789999987 699999
Q ss_pred -Chhhhccccccchhh-ccCceEEEe
Q 027423 170 -SPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 170 -spryLNkTLPeLaRv-sadglViF~ 193 (223)
++..+.+.|-++.|+ ..+|.+++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 677788888888886 456777764
No 9
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.10 E-value=0.00099 Score=47.98 Aligned_cols=100 Identities=16% Similarity=0.181 Sum_probs=70.3
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec-cccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 169 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVS-DaLDyL 169 (223)
.-.+||.+|..+......|.+. ..+..|+|+.+ ++-..++....+--+..+|+.- +|....+|++|+.+ +.+.++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDP--ILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCH--HHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 4568999999998887777766 56778887643 1222223222233345666643 45667899999998 899999
Q ss_pred Chhhhccccccchhhcc-CceEEEee
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G 194 (223)
++..+.+.|.++.|+-. +|.++++-
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 98888899999988754 56666653
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.05 E-value=0.0004 Score=52.81 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=69.0
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
.-.+||.+|..+......|.+.- ..+..|||+.+ ++.+..+++..- +--+..+|+. .+|.. .+|++|+.++++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYS-KYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTT-TCCCC-SCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchh-ccCCC-CCceEEEEeCccc
Confidence 34789999999998888777764 67888888743 223333332211 2234456663 23444 8999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~ 193 (223)
++++.-..+.|-++.|+- .+|.++++
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 998777667888888864 46777765
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.01 E-value=0.00074 Score=50.70 Aligned_cols=116 Identities=15% Similarity=0.048 Sum_probs=79.4
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccChh
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 172 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLspr 172 (223)
.+||.+|..+......|.+. ..+..|||+.+ +.-..++... .--+..+|+. .+| ...+|++|+.+++|.|+.+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAA-GFDVDATDGSP--ELAAEASRRL-GRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHH-TSCCEECCGG-GCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHc-CCeEEEECCCH--HHHHHHHHhc-CCceEEeeec-cCC-CCCcEEEEEecCchhhcCHH
Confidence 58999999999988777766 55788887643 2222333322 2234566764 345 67899999999999999998
Q ss_pred hhccccccchhhcc-CceEEEeecCcchh--------hccccchhHHHHHH
Q 027423 173 YLNKTLPDLARVAS-DGVLIFAGISSMFH--------LMKFSSDTWTEIHA 214 (223)
Q Consensus 173 yLNkTLPeLaRvsa-dglViF~G~P~q~~--------L~kfssswW~r~~~ 214 (223)
.+.+.|-++.|+-. +|.++++-.++..+ ..-|+...|.+.+.
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYA 169 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHH
Confidence 89999999999755 56666664433321 11246667776664
No 12
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.90 E-value=0.00066 Score=51.81 Aligned_cols=101 Identities=21% Similarity=0.244 Sum_probs=73.2
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
-.+||.+|..+......|.+.-..+..|||+.+ ++-+..+++.. .+=-+..+|+.- +|+...+|++|+..+++.++
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILT-KEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTT-CCCCTTCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECcccc-CCCCCCcEEEEeHHHHHHhc
Confidence 358999999998888888776567888887654 22233332222 122245567643 47778999999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEee
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G 194 (223)
++....+.|.++.|+-. +|.++++.
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999999999765 56666663
No 13
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.84 E-value=0.00092 Score=51.53 Aligned_cols=101 Identities=12% Similarity=0.098 Sum_probs=73.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-hhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-VHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsL-VrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
-.+||.||-.+......|++....+..|||+-+ ++-+..+++.. ..+--+..+|+. .+|....+|++|+..+++.|
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ-DFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh-hcCCCCCCEEEEEEcchhhh
Confidence 358999999999998888887766888988643 44444444433 122235566753 35666779999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEe
Q 027423 169 LSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~ 193 (223)
+.+..+.+.|-++.|+-. +|.++++
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 998777888888888754 6777775
No 14
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.82 E-value=0.00085 Score=51.29 Aligned_cols=99 Identities=20% Similarity=0.181 Sum_probs=68.2
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.-.+||.+|..|-.....|.+. ..+..|||+.+ ++-+..+++....+--+..+|+ ..+|+...+|++|+.++++.+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchhh
Confidence 3468999999998877777765 56788888753 2223333211112223456777 467888889999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEe
Q 027423 169 LSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~ 193 (223)
+. ...+.|.++.|+- .+|.++++
T Consensus 117 ~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 96 2456788888875 46777776
No 15
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.70 E-value=0.0022 Score=50.60 Aligned_cols=101 Identities=10% Similarity=0.075 Sum_probs=71.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
-.+||.+|-.+......|.+. ..+..|||+-+ ++-+..+++..--+--+..+|+.-. |. ..+|++||.+..+.|+
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA-NI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC-CC-CSCEEEEEECSSGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc-cc-cCCccEEEEccchhhC
Confidence 468999999998877777666 55888887643 3334444432211223555676533 33 8899999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEeec
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFAGI 195 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~ 195 (223)
++..+.+.|.++.|+-. +|.+++...
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99999999999988754 677565543
No 16
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.62 E-value=0.0039 Score=48.46 Aligned_cols=111 Identities=16% Similarity=0.181 Sum_probs=75.9
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCC
Q 027423 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKS 156 (223)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kS 156 (223)
....+..|++... .-.+||.||-.+......|.+. ..+..|||+.+ ++-..++....+--+..+|+.- +|. ..+
T Consensus 37 ~~~~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~ 110 (263)
T 3pfg_A 37 AADLAALVRRHSP-KAASLLDVACGTGMHLRHLADS-FGTVEGLELSA--DMLAIARRRNPDAVLHHGDMRD-FSL-GRR 110 (263)
T ss_dssp HHHHHHHHHHHCT-TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-CCC-SCC
T ss_pred HHHHHHHHHhhCC-CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhCCCCEEEECChHH-CCc-cCC
Confidence 3344455554433 3468999999999988888776 45788887642 2333343333333455677743 455 789
Q ss_pred ccEEEecc-ccccc-Chhhhccccccchhhc-cCceEEEe
Q 027423 157 FPLVIVSD-ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 157 FSlVIVSD-aLDyL-spryLNkTLPeLaRvs-adglViF~ 193 (223)
|++|+.+. .+.|+ +|..+.+.|-++.|+- .+|.+++.
T Consensus 111 fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 111 FSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999996 99999 5678888899999875 56777775
No 17
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.62 E-value=0.0035 Score=47.19 Aligned_cols=109 Identities=16% Similarity=0.284 Sum_probs=73.3
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 027423 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (223)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFS 158 (223)
.....|++.. ..-.+||.+|..+......|.+... +..|+|+.+ +.-..++....+--+..+|+. .+|. ..+|+
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D 102 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSE--DMLTHARKRLPDATLHQGDMR-DFRL-GRKFS 102 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCH--HHHHHHHHHCTTCEEEECCTT-TCCC-SSCEE
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCH--HHHHHHHHhCCCCEEEECCHH-Hccc-CCCCc
Confidence 3444555543 4456899999999998888877644 788877642 122223332223345566764 3455 78999
Q ss_pred EEE-eccccccc-Chhhhccccccchhhc-cCceEEEe
Q 027423 159 LVI-VSDALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 159 lVI-VSDaLDyL-spryLNkTLPeLaRvs-adglViF~ 193 (223)
+|+ ..+++.|+ +|..+.+.|-++.|+- .+|.++++
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 999 56799998 5678888888888874 46777776
No 18
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.53 E-value=0.0027 Score=47.02 Aligned_cols=97 Identities=22% Similarity=0.397 Sum_probs=68.0
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeec-CCCCCCCCCccEEEecccccc
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIK-FPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIk-fpLPYR~kSFSlVIVSDaLDy 168 (223)
..-.+||.+|..+......|.+. ..+..|+|+.+ ++-..++... .-+..+|+. +.+|+...+|++|+.++.+.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~--~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFP--EAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSH--HHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 34468999999999888888877 57888887643 1112222211 135567774 457888899999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEe
Q 027423 169 LSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~ 193 (223)
+... .+.|-++.|+- .+|.++++
T Consensus 106 ~~~~--~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 106 LFDP--WAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp SSCH--HHHHHHTGGGEEEEEEEEEE
T ss_pred cCCH--HHHHHHHHHHcCCCCEEEEE
Confidence 9643 47777787764 46677765
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.52 E-value=0.0037 Score=46.85 Aligned_cols=98 Identities=19% Similarity=0.280 Sum_probs=68.3
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.-.+||.+|..+......|.+. ..+..|||+.+- .-..++.... +--+..+|+. .+|.. .+|++|+..+++.++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSRE--MRMIAKEKLPKEFSITEGDFL-SFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHH--HHHHHHHHSCTTCCEESCCSS-SCCCC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHH--HHHHHHHhCCCceEEEeCChh-hcCCC-CCeEEEEECcchhcC
Confidence 4468999999999887777766 668889887531 2222222222 3335556664 24544 999999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEe
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~ 193 (223)
.....-+.|-++.|+-. +|.++++
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 88765558888888754 5677666
No 20
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.48 E-value=0.0037 Score=46.87 Aligned_cols=116 Identities=19% Similarity=0.241 Sum_probs=76.0
Q ss_pred hhhhHHHHHhc-cccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCC
Q 027423 79 RAIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAK 155 (223)
Q Consensus 79 ~aiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~k 155 (223)
+...++..... ..-.+||-+|..+......|.+.. .+..|||+.+ ++-+..+++..- +--+..+|+.-.. -..
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~--~~~ 113 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFS--TAE 113 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCC--CSC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCC--CCC
Confidence 33344444433 234689999999998887777664 6888888753 333433333211 1134566765433 368
Q ss_pred CccEEEecccccccC-hhhhccccccchhhccC-ceEEEeecCcch
Q 027423 156 SFPLVIVSDALDYLS-PKYLNKTLPDLARVASD-GVLIFAGISSMF 199 (223)
Q Consensus 156 SFSlVIVSDaLDyLs-pryLNkTLPeLaRvsad-glViF~G~P~q~ 199 (223)
+|++|+.++.+.|+. |..+.+.|.++.|+-.. |.+++ ..|...
T Consensus 114 ~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~-~~~~~~ 158 (216)
T 3ofk_A 114 LFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF-GSARDA 158 (216)
T ss_dssp CEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE-EEECHH
T ss_pred CccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE-EecCCC
Confidence 999999999999998 67888889999997665 55555 444433
No 21
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.47 E-value=0.0041 Score=44.94 Aligned_cols=114 Identities=10% Similarity=0.100 Sum_probs=75.7
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLsp 171 (223)
=.+||.+|..+......|.+... +..|||+-+ +.-..++....+=-+..+| +|+...+|++|+.++.+.++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~--~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINV--IALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE-EEEEECSCH--HHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS-
T ss_pred CCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCH--HHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc-
Confidence 35899999999988888887765 888988753 2333333332232344455 777788999999999999994
Q ss_pred hhhccccccchhhc-cCceEEEeecCcch------hhccccchhHHHHHH
Q 027423 172 KYLNKTLPDLARVA-SDGVLIFAGISSMF------HLMKFSSDTWTEIHA 214 (223)
Q Consensus 172 ryLNkTLPeLaRvs-adglViF~G~P~q~------~L~kfssswW~r~~~ 214 (223)
...+.|-++.|+- .+|.++++...... ....|+...|.+.+.
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS 138 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh
Confidence 3457778888765 46777776432221 222356666666554
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.47 E-value=0.002 Score=49.71 Aligned_cols=108 Identities=18% Similarity=0.215 Sum_probs=74.3
Q ss_pred hhHHHHHhcc-ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCc
Q 027423 81 IPILKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSF 157 (223)
Q Consensus 81 iP~LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSF 157 (223)
.+.|.+..+. .-.+||-+|..+......|++....+..|||+.+ ++-+..+++ ..+--+..+|+. .+|+...+|
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~-~~~~~~~~f 109 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIE-DIAIEPDAY 109 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGG-GCCCCTTCE
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchh-hCCCCCCCe
Confidence 3344444443 4468999999999888888877655888988753 222333332 112234567774 577778999
Q ss_pred cEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 158 PLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 158 SlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
++|+.++++.++ ..+.+.|-++.|+- .+|.++++
T Consensus 110 D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 110 NVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEE
Confidence 999999999999 34678888888854 56777775
No 23
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.45 E-value=0.0047 Score=46.16 Aligned_cols=114 Identities=26% Similarity=0.293 Sum_probs=76.0
Q ss_pred HHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCC
Q 027423 77 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 154 (223)
Q Consensus 77 V~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~ 154 (223)
.+..++.+.+.... -.+||.+|..+-.....|.+.. .+..|||+-+ ++.+..+++..-.+--+..+|+. .+|+..
T Consensus 25 ~~~~~~~l~~~~~~-~~~vLDlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 101 (227)
T 1ve3_A 25 IETLEPLLMKYMKK-RGKVLDLACGVGGFSFLLEDYG-FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLSFED 101 (227)
T ss_dssp HHHHHHHHHHSCCS-CCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCCSCT
T ss_pred HHHHHHHHHHhcCC-CCeEEEEeccCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-cCCCCC
Confidence 34445556555544 4689999999987776665554 4888888652 33344444332222234566764 356667
Q ss_pred CCccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 155 kSFSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
.+|++|+..+.+.+..+.-..+.|.++.|+-. +|.+++.
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 89999999999888887777888888888654 5666665
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.39 E-value=0.0027 Score=47.36 Aligned_cols=101 Identities=16% Similarity=0.299 Sum_probs=69.8
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---------eeeeeecCCCCCCCCCccEE
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---------VRVADIKFPLPYRAKSFPLV 160 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---------VRvADIkfpLPYR~kSFSlV 160 (223)
.-.+||.+|..+..+...|.+. ..+..|||+-+ ++-..++...+ .|+ +..+|+. .+|+...+|++|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v 105 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINS--EAIRLAETAARSPGLNQKTGGKAEFKVENAS-SLSFHDSSFDFA 105 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHTTCCSCCSSSSCEEEEEECCTT-SCCSCTTCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCccccCcceEEEEeccc-ccCCCCCceeEE
Confidence 3458999999999888777776 56788887642 12222332222 232 4456664 467778999999
Q ss_pred EecccccccC-hhhhccccccchhhcc-CceEEEeec
Q 027423 161 IVSDALDYLS-PKYLNKTLPDLARVAS-DGVLIFAGI 195 (223)
Q Consensus 161 IVSDaLDyLs-pryLNkTLPeLaRvsa-dglViF~G~ 195 (223)
+.++.+.++. |...-+.|.++.|+-. +|.++++..
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 9999999994 6766678888888654 667777643
No 25
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.0062 Score=48.68 Aligned_cols=107 Identities=7% Similarity=0.121 Sum_probs=76.0
Q ss_pred HHHHHhccccceeeeecCCcchhhhhccc--ccccccccccccc--ccchhHHHHhh---hhhcceeeeeecCCCCCCC-
Q 027423 83 ILKKAYGDSMHKVLHVGPDTCSVVSTLLK--EEETEAWGVEPYD--IEDADARCKSL---VHKGIVRVADIKFPLPYRA- 154 (223)
Q Consensus 83 ~LkkaYGdsM~kVLHVGPdtC~VVs~LLk--EeetEAWGVEPyd--iedad~~CKsL---VrKGiVRvADIkfpLPYR~- 154 (223)
.|.+.....-.+||-||-.+-.....|.+ ....+..||++.+ ++-+..+++.. ..+=-+..+|+. -+|+..
T Consensus 28 ~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~ 106 (299)
T 3g5t_A 28 MIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGA 106 (299)
T ss_dssp HHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCT
T ss_pred HHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCcccc
Confidence 34444445668999999999988888886 5678899998764 44455555543 223335567774 345555
Q ss_pred -----CCccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 155 -----KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 155 -----kSFSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
.+|++|+.+.++.++ .+.+.|.++.|+-. +|.+++.
T Consensus 107 ~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 107 DSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEE
Confidence 799999999999999 56688888888754 5676663
No 26
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.31 E-value=0.0025 Score=49.08 Aligned_cols=95 Identities=20% Similarity=0.173 Sum_probs=67.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCC-CCCCCCccEEEecccccccCh
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-PYRAKSFPLVIVSDALDYLSP 171 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpL-PYR~kSFSlVIVSDaLDyLsp 171 (223)
.+||.||-.+......|.+. ..+..||++.+ +.-..|+.. --+..+|+.-.+ |+...+|++|+.++++.++.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-GIESIGVDINE--DMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-TCCEEEECSCH--HHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHhC-CCcEEEEECCH--HHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 58999999998887666554 66788887743 222223322 112334543322 677899999999999999999
Q ss_pred hhhccccccchhhccC-ceEEEe
Q 027423 172 KYLNKTLPDLARVASD-GVLIFA 193 (223)
Q Consensus 172 ryLNkTLPeLaRvsad-glViF~ 193 (223)
..+.+.|-++.|+-.. |.++++
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEE
Confidence 8999999999998664 566554
No 27
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.30 E-value=0.0071 Score=49.47 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=82.0
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc---cccccccccccc--ccchhHHHHhhhhhcce--eeeeec
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEPYD--IEDADARCKSLVHKGIV--RVADIK 147 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE---eetEAWGVEPyd--iedad~~CKsLVrKGiV--RvADIk 147 (223)
.|+++.|-.|-+.|-..=.+||-+|-.|-...-.|++. .+.+.-||++.+ |+-|..+++..-...-| ..+|+.
T Consensus 54 ~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 54 SNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 35566666677777666679999999888776666553 455778887654 55566666544322333 346763
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 148 fpLPYR~kSFSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
.+|+ .+|++|+...+|.|+.|....+.|.++.|+ ...|.+|++
T Consensus 134 -~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 134 -DIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -TCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 4565 469999999999999998877889999886 556777765
No 28
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.25 E-value=0.011 Score=43.47 Aligned_cols=111 Identities=12% Similarity=0.184 Sum_probs=76.3
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCCCC
Q 027423 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKS 156 (223)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~kS 156 (223)
+..+.+..+..-.+||.+|..+......|.+....+..|||+.+ ++.+..+++..--.. -+..+|+. .+|+...+
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 111 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNY 111 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCccc
Confidence 34445555544449999999999988888877677888888643 333444443322111 23566763 46777899
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEee
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (223)
|++|+..+.+.|+ ....+.|.++.|+- .+|.++++.
T Consensus 112 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 112 ADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999999999998 44567888888864 567777764
No 29
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.23 E-value=0.012 Score=44.23 Aligned_cols=103 Identities=19% Similarity=0.311 Sum_probs=69.4
Q ss_pred hccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecc-
Q 027423 88 YGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSD- 164 (223)
Q Consensus 88 YGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSD- 164 (223)
++..-.+||.+|..+......|.+. ..+..|||+.+ ++-+..+++..-.+--+..+|+. .+|.. .+|++||.+.
T Consensus 34 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~ 110 (246)
T 1y8c_A 34 NNLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLNIN-RKFDLITCCLD 110 (246)
T ss_dssp TTCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCCCS-CCEEEEEECTT
T ss_pred hCCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCCcc-CCceEEEEcCc
Confidence 3445579999999999988877766 45788887643 23333333321102234456663 23433 8899999996
Q ss_pred ccccc-Chhhhccccccchhhcc-CceEEEe
Q 027423 165 ALDYL-SPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 165 aLDyL-spryLNkTLPeLaRvsa-dglViF~ 193 (223)
+|.|+ ++..+.+.|-++.|+-. +|.+++.
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999 66788889999998754 6777764
No 30
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.20 E-value=0.0075 Score=46.10 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=68.8
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-----------------------------hhhc-
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-----------------------------VHKG- 139 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsL-----------------------------VrKG- 139 (223)
-.+||.+|-.+......|.+....+..|+++-+ ++.+..+++.. +++.
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v 136 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAI 136 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHE
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhh
Confidence 368999999996554444444434788887643 23333332211 0000
Q ss_pred -ceeeeeecCCCCCCC---CCccEEEecccccccChh--hhccccccchhhc-cCceEEEeecC
Q 027423 140 -IVRVADIKFPLPYRA---KSFPLVIVSDALDYLSPK--YLNKTLPDLARVA-SDGVLIFAGIS 196 (223)
Q Consensus 140 -iVRvADIkfpLPYR~---kSFSlVIVSDaLDyLspr--yLNkTLPeLaRvs-adglViF~G~P 196 (223)
-+..+|+.-..|.-+ .+|++||.+.+|.++.|. .+.+.|-++.|+- .+|.+|++...
T Consensus 137 ~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 137 KQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred eeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 256678876666555 899999999999988776 6778888888864 56788887644
No 31
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.19 E-value=0.0057 Score=47.93 Aligned_cols=105 Identities=23% Similarity=0.239 Sum_probs=73.0
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 027423 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (223)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFS 158 (223)
..+|++.-. .-.+||-||..+......|.+. ..+..|||+.+ ++-+..+++ +.+..+|+. .+|+...+|+
T Consensus 45 ~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~~~~~~d~~-~~~~~~~~fD 116 (260)
T 2avn_A 45 GSFLEEYLK-NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----KNVVEAKAE-DLPFPSGAFE 116 (260)
T ss_dssp HHHHHHHCC-SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----SCEEECCTT-SCCSCTTCEE
T ss_pred HHHHHHhcC-CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----CCEEECcHH-HCCCCCCCEE
Confidence 344444333 4568999999998887777765 56888988753 222333322 347778875 4677788999
Q ss_pred EEEecccccccChhhhccccccchhhcc-CceEEEee
Q 027423 159 LVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 194 (223)
+|+..+.+.++.+. ..+.|-++.|+-. +|.++++-
T Consensus 117 ~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 117 AVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEe
Confidence 99998877777655 7788889988765 56666653
No 32
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.17 E-value=0.0025 Score=50.13 Aligned_cols=98 Identities=11% Similarity=0.138 Sum_probs=69.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||.||-.+......|.++-..+..||++-+ ++-+..+++..- .+--+..+|+. .+| .+|++|+..+++.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE-QFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG-GCC---CCCSEEEEESCGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh-hCC---CCeeEEEEeCchh
Confidence 358999999998888888766566888887642 233333333211 11124567773 566 8999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++.+....+.|-++.|+-. +|.+++.
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9998888899999999754 5666665
No 33
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.16 E-value=0.012 Score=42.40 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=67.1
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhh-cceeeeeecCCCCCCCCCccEEEecccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-GIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrK-GiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.-.+||-+|..+......|.+.- ..+..|+|+.+ ++-+..+++..--. .++..+|..-++|.-..+|++|+.+..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 34589999999988877777663 67889998765 45555555543212 3344466655777655899999999888
Q ss_pred cccChhhhccccccchh-hccCceEEEeec
Q 027423 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGI 195 (223)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~ 195 (223)
.+ .+.+.++.| +..+|.+++...
T Consensus 105 ~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 105 TA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp TC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred cH------HHHHHHHHHhcCCCCEEEEEee
Confidence 77 445556666 456788887754
No 34
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.12 E-value=0.015 Score=45.06 Aligned_cols=110 Identities=21% Similarity=0.281 Sum_probs=74.1
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCC
Q 027423 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKS 156 (223)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kS 156 (223)
..|.++..--..-.+||.||..+......|.+.. .+..|||+.+ ++.+..+++..- .+=-+..+|+. .+|+...+
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~ 87 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SLPFPDDS 87 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BCCSCTTC
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc-cCCCCCCc
Confidence 3455555555566799999999987776666554 5888888653 333333332211 11124567764 57888899
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
|++|+.++++.++. ...+.|.++.|+- .+|.++++
T Consensus 88 fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 88 FDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp EEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEE
Confidence 99999999999985 3467788888875 46777776
No 35
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.12 E-value=0.0054 Score=46.42 Aligned_cols=108 Identities=20% Similarity=0.265 Sum_probs=71.3
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh-c-ceeeeeecCCCCCCCCC
Q 027423 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-IVRVADIKFPLPYRAKS 156 (223)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrK-G-iVRvADIkfpLPYR~kS 156 (223)
..++.+++.-. .-.+||.+|..+-.....|.+. ..+..|||+-+ ++-..++..... + -+..+|+. .+|+...+
T Consensus 42 ~~~~~l~~~~~-~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~ 116 (242)
T 3l8d_A 42 TIIPFFEQYVK-KEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISE--VMIQKGKERGEGPDLSFIKGDLS-SLPFENEQ 116 (242)
T ss_dssp THHHHHHHHSC-TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHTTTCBTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHHHHcC-CCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhcccCCceEEEcchh-cCCCCCCC
Confidence 45566665544 3359999999998887777766 56788887643 222223322111 1 23456664 46777899
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
|++|+..+.+.++. ...+.|-++.|+-. +|.++++
T Consensus 117 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 117 FEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp EEEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEE
Confidence 99999999999984 33477888888765 4666655
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.96 E-value=0.0056 Score=46.92 Aligned_cols=98 Identities=12% Similarity=0.174 Sum_probs=71.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||-+|..+......|.+....+..|||+.+ ++-+..+++..--. =-+..+|+ ..+|+...+|++|+...++.+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhh
Confidence 48999999999888888877666889998754 44455555443211 22566788 677888899999999999999
Q ss_pred cChhhhccccccchhhc-cCceEEEee
Q 027423 169 LSPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 169 LspryLNkTLPeLaRvs-adglViF~G 194 (223)
+. ..+.|-++.|+- .+|.++++.
T Consensus 127 ~~---~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 127 IG---FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CC---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred cC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 95 356788888854 456766663
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.90 E-value=0.0074 Score=48.83 Aligned_cols=99 Identities=12% Similarity=0.150 Sum_probs=70.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||-+|..+-.....|.+.-..+..|||+.+ ++.+..+++..-- +--+..+|+. .+|+...+|++|+..+++.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEECCchh
Confidence 358999999998877777765356788988643 4445555543321 1234567774 5778789999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEee
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~G 194 (223)
++. ..+.|.++.|+-. +|.++++.
T Consensus 197 ~~~---~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 197 YVD---LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp GSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 995 7788888888754 56666654
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.87 E-value=0.0079 Score=44.99 Aligned_cols=100 Identities=19% Similarity=0.158 Sum_probs=70.2
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
=.+||.+|..+......|.+.. +.+.+|||+.+ ++.+..+++..-- +--+..+|+ ..+|+...+|++|+.++.+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTF 116 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCG
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhh
Confidence 3589999999998888888765 57899998643 3334444433211 122455666 3567778899999999999
Q ss_pred cccChhhhccccccchhhc-cCceEEEee
Q 027423 167 DYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 167 DyLspryLNkTLPeLaRvs-adglViF~G 194 (223)
.++. ...+.|-++.|+- .+|.++++.
T Consensus 117 ~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 117 HELS--EPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp GGCS--SHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcC--CHHHHHHHHHHHhCCCeEEEEEE
Confidence 9994 3467788888865 467777764
No 39
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.87 E-value=0.0038 Score=45.90 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=70.0
Q ss_pred cccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
..-.+||.+|..+......|++....+..|+|+.+ ++-+..+++.. .+--+..+|+.- +|+...+|++||....++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRK-LDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTS-CCSCSSCEEEEEEESHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhc-CCCCCCcccEEEECcchh
Confidence 33468999999998888888777555788887542 33344443321 123456677643 477788999999999999
Q ss_pred ccC-------------hhhhccccccchhhcc-CceEEEee
Q 027423 168 YLS-------------PKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 168 yLs-------------pryLNkTLPeLaRvsa-dglViF~G 194 (223)
++. .....+.|-++.|+-. +|.+|+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 886 4455677777777654 56666654
No 40
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=95.86 E-value=0.011 Score=44.15 Aligned_cols=96 Identities=23% Similarity=0.296 Sum_probs=65.4
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLs 170 (223)
.-.+||.+|..+......| ...+..|||+.+ ++-..++....+--+..+|+. .+|+...+|++|+..+.++++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSE--AMLAVGRRRAPEATWVRAWGE-ALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCH--HHHHHHHHHCTTSEEECCCTT-SCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcccc-cCCCCCCcEEEEEEcChhhhcC
Confidence 4568999999998877666 223778887653 122222222222334556764 4788888999999999999996
Q ss_pred hhhhccccccchhhcc-CceEEEee
Q 027423 171 PKYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 171 pryLNkTLPeLaRvsa-dglViF~G 194 (223)
...+.|-++.|+-. +|.++++.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEe
Confidence 34577888888754 56777664
No 41
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.80 E-value=0.019 Score=45.14 Aligned_cols=99 Identities=17% Similarity=0.132 Sum_probs=69.3
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLs 170 (223)
.-.+||-||-.|-.....|.+ ...+..||++.+ ..-..++... +--+.++|+. .+|+...+|++|+...++.++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~- 107 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSI--VMRQQAVVHP-QVEWFTGYAE-NLALPDKSVDGVISILAIHHF- 107 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCH--HHHHSSCCCT-TEEEECCCTT-SCCSCTTCBSEEEEESCGGGC-
T ss_pred CCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCH--HHHHHHHhcc-CCEEEECchh-hCCCCCCCEeEEEEcchHhhc-
Confidence 457899999999888777776 567899998765 1111111111 2234567774 478888999999999999998
Q ss_pred hhhhccccccchhhccCc-eEEEeecC
Q 027423 171 PKYLNKTLPDLARVASDG-VLIFAGIS 196 (223)
Q Consensus 171 pryLNkTLPeLaRvsadg-lViF~G~P 196 (223)
....+.|-++.|+-.+| ++|++-.|
T Consensus 108 -~~~~~~l~~~~~~LkgG~~~~~~~~~ 133 (261)
T 3ege_A 108 -SHLEKSFQEMQRIIRDGTIVLLTFDI 133 (261)
T ss_dssp -SSHHHHHHHHHHHBCSSCEEEEEECG
T ss_pred -cCHHHHHHHHHHHhCCcEEEEEEcCC
Confidence 45668888899987777 45554443
No 42
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.78 E-value=0.011 Score=47.26 Aligned_cols=106 Identities=13% Similarity=0.140 Sum_probs=72.3
Q ss_pred HHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh----hhcceeeeeecCCCCCCCCCcc
Q 027423 85 KKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV----HKGIVRVADIKFPLPYRAKSFP 158 (223)
Q Consensus 85 kkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV----rKGiVRvADIkfpLPYR~kSFS 158 (223)
.+..+..-.+||-||-.+......|.+. ..+..|||+-+ ++-+..+++..- .+=-+..+|+.- +|+ ..+|+
T Consensus 76 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD 152 (299)
T 3g2m_A 76 ATRTGPVSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFG 152 (299)
T ss_dssp HHHHCCCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEE
T ss_pred HHhhCCCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcC
Confidence 3344443349999999999988888776 56788887653 233333332210 111256777753 555 78999
Q ss_pred EEEec-ccccccChhhhccccccchhhcc-CceEEEe
Q 027423 159 LVIVS-DALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 159 lVIVS-DaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
+||.+ .++.|++|..+.+.|-++.|+-. +|.+++.
T Consensus 153 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 153 TVVISSGSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp EEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99965 88999999889999999999765 5666554
No 43
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.77 E-value=0.012 Score=46.31 Aligned_cols=102 Identities=16% Similarity=0.197 Sum_probs=71.1
Q ss_pred HHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc-----eeeeeecCCCCCCCCCcc
Q 027423 86 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFP 158 (223)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvADIkfpLPYR~kSFS 158 (223)
+.++..-.+||-||..+......|.+. ..+..|||+.+ ++-+..+++. .|+ +..+|+.-..++-..+|+
T Consensus 63 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~~~~~~fD 138 (285)
T 4htf_A 63 AEMGPQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEA---KGVSDNMQFIHCAAQDVASHLETPVD 138 (285)
T ss_dssp HHTCSSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC----CCGGGEEEEESCGGGTGGGCSSCEE
T ss_pred HhcCCCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh---cCCCcceEEEEcCHHHhhhhcCCCce
Confidence 334444568999999998887777766 67889998753 3333333332 233 566777654447789999
Q ss_pred EEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 159 LVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
+|+..+.+.|+.. ..+.|-++.|+-. +|.++++
T Consensus 139 ~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 139 LILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEE
Confidence 9999999999953 3678888888766 4566655
No 44
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.74 E-value=0.02 Score=44.43 Aligned_cols=104 Identities=20% Similarity=0.277 Sum_probs=72.3
Q ss_pred HHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-----ceeeeeecCCCCC-CCCCc
Q 027423 86 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-----IVRVADIKFPLPY-RAKSF 157 (223)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-----iVRvADIkfpLPY-R~kSF 157 (223)
+.+-..=.+||.+|..+......|.+....+..|||+.+ ++-+..+++. .| -+..+|+. .+|+ ...+|
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~-~~~~~~~~~f 134 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARN---MKRRFKVFFRAQDSY-GRHMDLGKEF 134 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHT---SCCSSEEEEEESCTT-TSCCCCSSCE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh---cCCCccEEEEECCcc-ccccCCCCCc
Confidence 344445579999999998888777776666889988653 2333333322 22 23456653 2355 57899
Q ss_pred cEEEecccccc--cChhhhccccccchhhcc-CceEEEe
Q 027423 158 PLVIVSDALDY--LSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 158 SlVIVSDaLDy--LspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++|+..+++.| .++..+.+.|-++.|+-. +|.++++
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999999998 678888889999998765 5666655
No 45
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.74 E-value=0.0075 Score=43.08 Aligned_cols=93 Identities=12% Similarity=0.105 Sum_probs=65.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
-.+||.+|..+..+...|.+ ...+..|+|+.+ ++-+..+++..- .+=-+..+|+.-+ +...+|++|+..+.
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~i~~~~~--- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--LDKLEFNKAFIGGT--- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH--GGGCCCSEEEECSC---
T ss_pred CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc--ccCCCCcEEEECCc---
Confidence 35899999999888887777 777888888653 344444443221 1112345666544 44579999999887
Q ss_pred cChhhhccccccchhhccCceEEEee
Q 027423 169 LSPKYLNKTLPDLARVASDGVLIFAG 194 (223)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~G 194 (223)
..+.+.+.++.|+ .+|.++++.
T Consensus 110 ---~~~~~~l~~~~~~-~gG~l~~~~ 131 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK-KINHIVANT 131 (183)
T ss_dssp ---SCHHHHHHHHHHT-TCCEEEEEE
T ss_pred ---ccHHHHHHHHhhC-CCCEEEEEe
Confidence 4556778889999 999998875
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.73 E-value=0.012 Score=43.50 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=67.4
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc----ceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKG----iVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||.+|..+..+...|.+. ..+..|||+.+ +.-..++. +| -+..+|+.-. ....+|++|+.+.++.+
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~--~~~~~a~~---~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-ADRVTALDGSA--EMIAEAGR---HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-SSEEEEEESCH--HHHHHHGG---GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGG
T ss_pred CeEEEECCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHh---cCCCCeEEEecccccC--CCCCceeEEEEechhhc
Confidence 38999999998877777666 56888887643 12222332 33 2445666443 56789999999999999
Q ss_pred cChhhhccccccchhhcc-CceEEEe
Q 027423 169 LSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~ 193 (223)
+.+..+.+.|-++.|+-. +|.++++
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 999888888999988765 5666666
No 47
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=95.67 E-value=0.014 Score=47.09 Aligned_cols=107 Identities=15% Similarity=0.111 Sum_probs=71.8
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--------hhcceeeeeecCCC---CCC--CC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--------HKGIVRVADIKFPL---PYR--AK 155 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--------rKGiVRvADIkfpL---PYR--~k 155 (223)
.-.+||.+|-.|......|++....+..|+++-+ ++.+..+++..- .+--+..+|+.-.. |+. ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 3458999999999998888876666788887643 233333333221 01234567775321 343 45
Q ss_pred CccEEEeccccccc--Chhhhccccccchhhc-cCceEEEeecCcc
Q 027423 156 SFPLVIVSDALDYL--SPKYLNKTLPDLARVA-SDGVLIFAGISSM 198 (223)
Q Consensus 156 SFSlVIVSDaLDyL--spryLNkTLPeLaRvs-adglViF~G~P~q 198 (223)
+|++|+.+.++.|+ ++..+.+.|-++.|+- .+|++|++ .|+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~-~~~~ 158 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT-TPNS 158 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE-EECH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe-cCCh
Confidence 99999999999998 6677888888998864 56777765 3443
No 48
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.60 E-value=0.017 Score=43.59 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=66.2
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
-.+||.+|..+......|.+....+..|||+-+ ++-..++....+ --+..+|+.- +|+...+|++|+.++.+.++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE--KMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH--HHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEecccccc
Confidence 458999999998888877776544888888652 222223322222 1244566643 56668899999999999998
Q ss_pred Chhhhccccccchhhc-cCceEEEe
Q 027423 170 SPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 170 spryLNkTLPeLaRvs-adglViF~ 193 (223)
. .+.+.|-++.|+- .+|.++++
T Consensus 121 ~--~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 121 E--DVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred c--hHHHHHHHHHHhcCcCcEEEEE
Confidence 5 3567778888864 46676665
No 49
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.54 E-value=0.022 Score=44.16 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=67.3
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
.-.+||-||..+-.....|.+.. .+..||++.+ ++-+..+++..- .+--+..+|+. .+|+...+|++|+...++.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCCCCCCCEEEEEEhhhhH
Confidence 44689999999888766666554 4888888653 333333332210 11124567774 3677789999999999999
Q ss_pred ccChhhhccccccchhhc-cCceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF~ 193 (223)
++. ...+.|.++.|+- .+|.++++
T Consensus 115 ~~~--d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 115 HFP--NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC--CHHHHHHHHHHHcCCCCEEEEE
Confidence 985 3357888999875 46777776
No 50
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.38 E-value=0.017 Score=43.04 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=64.1
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLsp 171 (223)
.+||.||..+......|.+.. .+..||++.+ +.-..++.... +--+..+|+.-. .-..+|++|+.+++|.++..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~--~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHF-NDITCVEASE--EAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTC-SCEEEEESCH--HHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHHhC-CcEEEEeCCH--HHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhcC
Confidence 479999999988877776654 4788887753 12222332222 223455676543 24688999999999999953
Q ss_pred hhhccccccch-hhcc-CceEEEee
Q 027423 172 KYLNKTLPDLA-RVAS-DGVLIFAG 194 (223)
Q Consensus 172 ryLNkTLPeLa-Rvsa-dglViF~G 194 (223)
..+.|-++. |+-. +|.++++-
T Consensus 119 --~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 119 --PVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHhcCCCCEEEEEc
Confidence 357888888 8754 56766653
No 51
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.14 E-value=0.024 Score=44.65 Aligned_cols=95 Identities=13% Similarity=0.167 Sum_probs=66.2
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLsp 171 (223)
-.+||-||..+-.....|.+ ...+..||++.+- .-..++....+--+.++|+.- +|+ ..+|++|+.+.++.++.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~~- 131 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAAT--MIEKARQNYPHLHFDVADARN-FRV-DKPLDAVFSNAMLHWVK- 131 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHH--HHHHHHHHCTTSCEEECCTTT-CCC-SSCEEEEEEESCGGGCS-
T ss_pred CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHH--HHHHHHhhCCCCEEEECChhh-CCc-CCCcCEEEEcchhhhCc-
Confidence 45899999999888777776 6678889887531 111122211233466778754 666 68999999999999985
Q ss_pred hhhccccccchhhcc-CceEEEe
Q 027423 172 KYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~ 193 (223)
...+.|.++.|+-. +|.++++
T Consensus 132 -d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 132 -EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CHHHHHHHHHHhcCCCcEEEEE
Confidence 34577888888866 5666654
No 52
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.13 E-value=0.072 Score=41.29 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=67.7
Q ss_pred ccceeeeecCCcchhhhhccccc--ccccccccccc--------ccchhHHHHhhh--hhcceeeee-e-cCCCCCCCCC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--------IEDADARCKSLV--HKGIVRVAD-I-KFPLPYRAKS 156 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--------iedad~~CKsLV--rKGiVRvAD-I-kfpLPYR~kS 156 (223)
.-.+||-||..+-.....|.+.- ..+.-||++.+ ++.+..+++..- .+=-+..+| + ...+|+...+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCC
Confidence 34589999999998888888763 27899999876 344444443221 111233455 3 3567888899
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
|++|+..+.+.++... .+-+-.+.++-. +|.++++
T Consensus 123 fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 123 FDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp CSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEE
T ss_pred EEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEE
Confidence 9999999999998643 223334455555 8888886
No 53
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=95.09 E-value=0.059 Score=42.80 Aligned_cols=102 Identities=14% Similarity=0.210 Sum_probs=68.4
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHh-------------h-hhhc---------------
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKS-------------L-VHKG--------------- 139 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKs-------------L-VrKG--------------- 139 (223)
-.+||-||-.|-. .+.++.. ...+..||++.+ ++.+..+++. . ...|
T Consensus 72 ~~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CSEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 3589999999877 5555544 355888888743 2223332221 0 0122
Q ss_pred --ceeeeeecCCCCC-----CCCCccEEEecccccccChh--hhccccccchhhc-cCceEEEee
Q 027423 140 --IVRVADIKFPLPY-----RAKSFPLVIVSDALDYLSPK--YLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 140 --iVRvADIkfpLPY-----R~kSFSlVIVSDaLDyLspr--yLNkTLPeLaRvs-adglViF~G 194 (223)
-+..+|+.-++|+ ...+|++|+.+.+|.++.+. .+.+.|.++.|+= ..|.++|++
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1334588766664 34679999999999998876 7888999999975 467888775
No 54
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.07 E-value=0.036 Score=43.79 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=70.1
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.-.+||.||-.+......|.+.-..+..||++.+ ++-+..+++..- .+=-+..+|+. .+|+...+|++|+..+++
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecchh
Confidence 3458999999998888888776456788887653 233443333221 11124456663 578888999999999999
Q ss_pred cccChhhhccccccchhhcc-CceEEEe
Q 027423 167 DYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 167 DyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
.++.. ..+.|-++.|+-. +|.++++
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~ 186 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAIT 186 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEE
Confidence 99976 5788888998754 6677666
No 55
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.05 E-value=0.026 Score=46.29 Aligned_cols=109 Identities=19% Similarity=0.168 Sum_probs=73.0
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccc-cccccchhHHHHhhhh--hcceeeeeecCCCCCCCCC
Q 027423 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVE-PYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKS 156 (223)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVE-Pydiedad~~CKsLVr--KGiVRvADIkfpLPYR~kS 156 (223)
+.+-+.|. ..-.+||.||-.+-.....|++.. +.+..|++ |--++.+..+++..-- +=-+...|+.-++|- .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 249 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---K 249 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS---C
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC---C
Confidence 44445554 335689999999998888887764 45677777 4444545554443211 112345676546663 4
Q ss_pred ccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
|++|+.++.|.++++....+.|-++.|+ ..+|.+++.
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999999999999887777788888886 456766665
No 56
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.00 E-value=0.022 Score=44.50 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=70.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||-||..+......|.+....+..|||+.+ ++-+..+++..- .+=-+..+|+ ..+|+...+|++|+...++.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCce
Confidence 368999999999998888888677899998754 333444444321 1123456777 45777789999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++.| .+.|-++.|+-. +|.++++
T Consensus 126 ~~~~---~~~l~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 126 NIGF---ERGLNEWRKYLKKGGYLAVS 149 (267)
T ss_dssp GTCH---HHHHHHHGGGEEEEEEEEEE
T ss_pred ecCH---HHHHHHHHHHcCCCCEEEEE
Confidence 9954 556777777544 5666665
No 57
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.99 E-value=0.05 Score=44.58 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=69.4
Q ss_pred hhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccE
Q 027423 81 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPL 159 (223)
Q Consensus 81 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSl 159 (223)
+-.|.+.-+ .-.+||-||-.|-.... .|.+...+..||+|-+ +.-..++. +.+ -..++|.. .+|+...||++
T Consensus 30 ~~~l~~~~~-~~~~vLDvGcGtG~~~~-~l~~~~~~v~gvD~s~--~ml~~a~~--~~~v~~~~~~~e-~~~~~~~sfD~ 102 (257)
T 4hg2_A 30 FRWLGEVAP-ARGDALDCGCGSGQASL-GLAEFFERVHAVDPGE--AQIRQALR--HPRVTYAVAPAE-DTGLPPASVDV 102 (257)
T ss_dssp HHHHHHHSS-CSSEEEEESCTTTTTHH-HHHTTCSEEEEEESCH--HHHHTCCC--CTTEEEEECCTT-CCCCCSSCEEE
T ss_pred HHHHHHhcC-CCCCEEEEcCCCCHHHH-HHHHhCCEEEEEeCcH--Hhhhhhhh--cCCceeehhhhh-hhcccCCcccE
Confidence 344554433 33579999999876544 4455567899998864 11111211 112 23445553 46777999999
Q ss_pred EEecccccccChhhhccccccchhh-ccCceEEEeec
Q 027423 160 VIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 160 VIVSDaLDyLspryLNkTLPeLaRv-sadglViF~G~ 195 (223)
|+++.++.|+.| .+.+.|++|| ..+|++++.++
T Consensus 103 v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 103 AIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEEC
Confidence 999999999975 4789999998 45677777655
No 58
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=94.82 E-value=0.026 Score=40.42 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=66.5
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh---cceeeeeecCCCCCCCCCccEEEeccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK---GIVRVADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK---GiVRvADIkfpLPYR~kSFSlVIVSDa 165 (223)
.-.+||.+|..+......+.+. ..+..|+|+-+ ++.+..+++..--. --+..+|+.-+++ ..+|++|+....
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~ 128 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPP 128 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCC
Confidence 3458999999998888888777 77888888543 34444444432111 2344566655554 778999998655
Q ss_pred ccccChhhhccccccchhh-ccCceEEEeecCcc
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGISSM 198 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~P~q 198 (223)
+.+ ....+.+.+-++.|+ ..+|.++++....+
T Consensus 129 ~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 129 IRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp STT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred ccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 432 345566677777775 45677777755443
No 59
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=94.72 E-value=0.019 Score=46.09 Aligned_cols=98 Identities=8% Similarity=0.117 Sum_probs=66.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||.||-.+......|.+.-..+..|||+-+ ++-+..+++..- .+--+..+|+. .+| .+|++|+..+++.
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE-DFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG-GCC---CCCSEEEEESCGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH-HCC---CCcCEEEEeChHH
Confidence 358999999998777777765455788887642 233333332210 01123456662 345 7899999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++.+..+.+.|-++.|+-. +|.++++
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9998888999999998754 5666664
No 60
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.61 E-value=0.071 Score=53.78 Aligned_cols=105 Identities=10% Similarity=0.111 Sum_probs=78.1
Q ss_pred ccceeeeecCCcchhhhhcccccc--cccccccccc--ccchhHHHHhhhh---hcc----eeeeeecCCCCCCCCCccE
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLPYRAKSFPL 159 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEee--tEAWGVEPyd--iedad~~CKsLVr---KGi----VRvADIkfpLPYR~kSFSl 159 (223)
.-.+||-||-.+......|.+... .+..||++.+ ++-|..+.+.... .|+ +..+|+. .+|++..+|++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~-dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL-EFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT-SCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH-hCCcccCCeeE
Confidence 346899999999999888887763 6899998865 3334444433221 133 4556664 37888899999
Q ss_pred EEecccccccChhhhccccccchhhccCceEEEeecCc
Q 027423 160 VIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGISS 197 (223)
Q Consensus 160 VIVSDaLDyLspryLNkTLPeLaRvsadglViF~G~P~ 197 (223)
|+..+++.|+.+..+-+.+.++.|+-..| +++...|.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999999988888899999999999 44444443
No 61
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=94.49 E-value=0.088 Score=40.74 Aligned_cols=100 Identities=24% Similarity=0.345 Sum_probs=68.0
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.-.+||.||-.+-.....|.+.-..+..||++.+ ++-+..+++..- .+--+..+|+. .+|+...+|++|+..+++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DLPFEDASFDAVWALESL 139 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCSCTTCEEEEEEESCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cCCCCCCCccEEEEechh
Confidence 3468999999998887777776567888887643 333444433211 11224456663 467778899999999999
Q ss_pred cccChhhhccccccchhhcc-CceEEEe
Q 027423 167 DYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 167 DyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
.++... .+.|-++.|+-. +|.++++
T Consensus 140 ~~~~~~--~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 140 HHMPDR--GRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp TTSSCH--HHHHHHHHTTEEEEEEEEEE
T ss_pred hhCCCH--HHHHHHHHHHcCCCeEEEEE
Confidence 999533 577788888755 5666665
No 62
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.49 E-value=0.068 Score=40.88 Aligned_cols=99 Identities=19% Similarity=0.239 Sum_probs=66.4
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec-cccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALD 167 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVS-DaLD 167 (223)
.-.+||.+|..|......|.+. ..+..|||+-+ ++.+..+++..-.+--+..+|+.- +|.. .+|++|+.. ..+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CCCC-SCEEEEEECSSGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cccC-CCccEEEEcCCchh
Confidence 3468999999998887777765 56788888643 333444443321111244566642 3332 689999976 6778
Q ss_pred ccChhhhccccccchhhc-cCceEEE
Q 027423 168 YLSPKYLNKTLPDLARVA-SDGVLIF 192 (223)
Q Consensus 168 yLspryLNkTLPeLaRvs-adglViF 192 (223)
|+++..+.+.|.++.|+- .+|++|+
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 888888888999988865 4666665
No 63
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.39 E-value=0.035 Score=43.24 Aligned_cols=99 Identities=22% Similarity=0.248 Sum_probs=68.4
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||.||..+......|.+.. ..+..|||+.+ ++.+..+++..-- .=-+..+|+. .+|+...+|++|+.++.+.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEechhh
Confidence 4589999999999888888764 57888988753 2333333332211 1113456765 5677789999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++.. ..+.|.++.|+-. +|.++++
T Consensus 117 ~~~~--~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 117 HLQS--PEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCcEEEEE
Confidence 9963 3477888888654 5666665
No 64
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=94.12 E-value=0.056 Score=44.35 Aligned_cols=110 Identities=22% Similarity=0.173 Sum_probs=71.1
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-ccccccccc-ccccchhHHHHhhhhhcce--eeeeecCCCCCCCCC
Q 027423 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGIV--RVADIKFPLPYRAKS 156 (223)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEP-ydiedad~~CKsLVrKGiV--RvADIkfpLPYR~kS 156 (223)
+.+-+.|. ..-.+||.||-.+......|++.- ..+..|++. --++.+..+++..--.+-| ...|+.-++|. .
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 248 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPV---T 248 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC---C
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC---C
Confidence 44445553 235689999999999888888764 456777763 2233344443322111123 44566446664 4
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEee
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (223)
|++|+.++.|.+++.....+.|-++.|+- .+|.+++.-
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999999999998877667788888864 567666553
No 65
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.09 E-value=0.17 Score=40.58 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=68.7
Q ss_pred hHHHHHhc---cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---e--eeeeecCCCC
Q 027423 82 PILKKAYG---DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLP 151 (223)
Q Consensus 82 P~LkkaYG---dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKGi---V--RvADIkfpLP 151 (223)
+-+-+.|. ..-.+||.||-.+......|++.- ..+..|++.- ++-..++..+ +.|+ | ...|+.- .|
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 228 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA---SVLEVAKENARIQGVASRYHTIAGSAFE-VD 228 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH---HHHHHHHHHHHHHTCGGGEEEEESCTTT-SC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH---HHHHHHHHHHHhcCCCcceEEEeccccc-CC
Confidence 33444554 455799999999998888777663 4567777654 2222233222 2222 3 3455532 23
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 152 YR~kSFSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
.. +.|++|+.++.|.|.++....+.|-++.|+- .+|.+++.
T Consensus 229 ~~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 229 YG-NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp CC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 32 3499999999999999888888888888864 56755554
No 66
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.97 E-value=0.15 Score=41.30 Aligned_cols=109 Identities=15% Similarity=0.169 Sum_probs=72.0
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-ccccccccc-ccccchhHHHHhhhhhcce--eeeeecCCCCCCCC
Q 027423 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGIV--RVADIKFPLPYRAK 155 (223)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEP-ydiedad~~CKsLVrKGiV--RvADIkfpLPYR~k 155 (223)
.+.+-+.|+ .. .+||.||..+......|++.- ..+..|++. --++.+..+++..--..-| ...|+.-|+| +
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~ 232 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVP---S 232 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC---S
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC---C
Confidence 345555553 23 799999999999888887653 456777765 1123344443322111223 3456544555 6
Q ss_pred CccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 156 SFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 156 SFSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
+|++|+.++.|.+.++....+.|-++.|+ ..+|.+++.
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 89999999999999988877888888876 456777666
No 67
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=93.90 E-value=0.054 Score=40.48 Aligned_cols=103 Identities=19% Similarity=0.159 Sum_probs=64.1
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
.-.+||-+|-.+-.....|.+. ..+.+|||+.+ ++-+..+++.+--.. -+..+|+.-.++ ...+|++|++...+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAPP 154 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccchh
Confidence 3468999999988777666665 67889988764 333444444321111 244566644333 367999999999998
Q ss_pred ccChhhhccccccchh-hccCceEEEeecCcchhhcc
Q 027423 168 YLSPKYLNKTLPDLAR-VASDGVLIFAGISSMFHLMK 203 (223)
Q Consensus 168 yLspryLNkTLPeLaR-vsadglViF~G~P~q~~L~k 203 (223)
++.+ ++.| +..+|.+++.=.++.+++..
T Consensus 155 ~~~~--------~~~~~L~pgG~lv~~~~~~~~~~~~ 183 (210)
T 3lbf_A 155 EIPT--------ALMTQLDEGGILVLPVGEEHQYLKR 183 (210)
T ss_dssp SCCT--------HHHHTEEEEEEEEEEECSSSCEEEE
T ss_pred hhhH--------HHHHhcccCcEEEEEEcCCceEEEE
Confidence 8764 3444 45677777763334444433
No 68
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=93.84 E-value=0.091 Score=39.38 Aligned_cols=85 Identities=19% Similarity=0.259 Sum_probs=59.7
Q ss_pred ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 170 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLs 170 (223)
.-.+||.+|..+......|- .+..||++.+- .--+..+|+.- +|+...+|++|+.++++.+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~-- 127 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------DPRVTVCDMAQ-VPLEDESVDVAVFCLSLMG-- 127 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------STTEEESCTTS-CSCCTTCEEEEEEESCCCS--
T ss_pred CCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------CceEEEecccc-CCCCCCCEeEEEEehhccc--
Confidence 34589999999987766652 56777776654 12345667643 6777889999999999964
Q ss_pred hhhhccccccchhhc-cCceEEEeec
Q 027423 171 PKYLNKTLPDLARVA-SDGVLIFAGI 195 (223)
Q Consensus 171 pryLNkTLPeLaRvs-adglViF~G~ 195 (223)
..+.+.|-++.|+- .+|.++++-.
T Consensus 128 -~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 128 -TNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 34567777888864 5677777643
No 69
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=93.82 E-value=0.052 Score=43.30 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=65.8
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||.||..|......|.+.- ..+..||++.+ ++-+..+++..-.+=-+.++|+. .+|+ +.+|++|+....+.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIEL-NDKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCCC-SSCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcCc-CCCeeEEEECChhh
Confidence 4689999999998888777762 46888987643 23333333322112235567876 4666 57999999999999
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++... .+.|-++.|+-. +|.+++.
T Consensus 101 ~~~~~--~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 101 HMTTP--ETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp GCSSH--HHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCH--HHHHHHHHHHcCCCCEEEEE
Confidence 98532 467777777655 5555544
No 70
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=93.77 E-value=0.14 Score=37.82 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=63.6
Q ss_pred eeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccCh
Q 027423 94 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 171 (223)
Q Consensus 94 kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLsp 171 (223)
+||.+|..+......|.+. ..+..|||+-+ ++.+..+.+..-.+--+..+|+. .+|+...+|++|+.+ +-++.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~--~~~~~~ 107 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLA-DFDIVADAWEGIVSI--FCHLPS 107 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTT-TBSCCTTTCSEEEEE--CCCCCH
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChh-hcCCCcCCccEEEEE--hhcCCH
Confidence 9999999998777666665 56888887642 22233332221001224456663 346667899999985 456677
Q ss_pred hhhccccccchhhcc-CceEEEee
Q 027423 172 KYLNKTLPDLARVAS-DGVLIFAG 194 (223)
Q Consensus 172 ryLNkTLPeLaRvsa-dglViF~G 194 (223)
....+.|-++.|+-. +|.++++.
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 788888899988754 67777763
No 71
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=93.63 E-value=0.082 Score=39.48 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=64.0
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
-.+||-+|..+......|.+....+..|||.-+ ++-+..+++..--.+ -+..+|+. ++-.++|++|+....+++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHH
Confidence 358999999998877776665556888888643 344555554332222 23445653 233589999998766654
Q ss_pred cChhhhccccccchhh-ccCceEEEeecCc
Q 027423 169 LSPKYLNKTLPDLARV-ASDGVLIFAGISS 197 (223)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~P~ 197 (223)
+.+.+.++.|+ ..+|.+++++...
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 45667777775 5678888875443
No 72
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.60 E-value=0.11 Score=43.42 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=74.1
Q ss_pred hHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh-hc-----ceeeeeecC---CCC
Q 027423 82 PILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKF---PLP 151 (223)
Q Consensus 82 P~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr-KG-----iVRvADIkf---pLP 151 (223)
++++..+...-.+||-||-.|-.....|++.- ..+..|++. +++-..++...+ .| -+...|+-- |+|
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p 246 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL---PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP 246 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC---HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC
T ss_pred HHHHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC---HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC
Confidence 55666666678999999999988888888753 446666653 343333433322 22 234567654 355
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 152 YR~kSFSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
++|++|+.+.+|.++++...-+.|-++.|+ ..+|.+++.
T Consensus 247 ---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 247 ---TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp ---CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 899999999999999988877888888885 567877764
No 73
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=93.51 E-value=0.15 Score=38.71 Aligned_cols=110 Identities=13% Similarity=0.148 Sum_probs=68.5
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCC--CCCCCc
Q 027423 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLP--YRAKSF 157 (223)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLP--YR~kSF 157 (223)
+++.++..-.+||-+|-.+-.....|.+.- +.+..|||+.+ ++.+..+++..- .+=-+..+|+.- +| +...+|
T Consensus 34 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~ 112 (214)
T 1yzh_A 34 WRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEI 112 (214)
T ss_dssp HHHHHTSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCC
T ss_pred HHHHcCCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCC
Confidence 446678777899999999998887777664 56889998653 344555554321 111134567653 55 667889
Q ss_pred cEEEecccccccChhhh------ccccccchh-hccCceEEEee
Q 027423 158 PLVIVSDALDYLSPKYL------NKTLPDLAR-VASDGVLIFAG 194 (223)
Q Consensus 158 SlVIVSDaLDyLspryL------NkTLPeLaR-vsadglViF~G 194 (223)
++|++.-...+...++- .+.|.++.| +..+|.+++..
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 99987633223222221 234556666 46678888864
No 74
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=93.50 E-value=0.042 Score=43.13 Aligned_cols=100 Identities=21% Similarity=0.209 Sum_probs=67.9
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhh-----hhhcceeeeeecCCCC---CCCCCccEEE
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-----VHKGIVRVADIKFPLP---YRAKSFPLVI 161 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsL-----VrKGiVRvADIkfpLP---YR~kSFSlVI 161 (223)
-.+||.||..|......|.+. ..+..||++.+ ++-+..++... ..+-.+..+|+. .+| +-..+|++|+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDAVI 135 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEEEE
Confidence 358999999999888777766 44888888753 23333332111 112223445542 344 6678999999
Q ss_pred ec-ccccccCh-----hhhccccccchhhcc-CceEEEe
Q 027423 162 VS-DALDYLSP-----KYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 162 VS-DaLDyLsp-----ryLNkTLPeLaRvsa-dglViF~ 193 (223)
.. +++.|+.. ..+.+.|-++.|+-. +|.++++
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 98 99999988 668888999999755 5566554
No 75
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=93.44 E-value=0.041 Score=44.59 Aligned_cols=123 Identities=10% Similarity=0.166 Sum_probs=77.6
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhh------------------------------
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHK------------------------------ 138 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrK------------------------------ 138 (223)
-.+||-||-.+-.+...|.+. ...+..||+.-+ ++.|..+.+.....
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 358999999998887777766 356888988653 44444444332211
Q ss_pred ---------------------------cce--eeeeecCC----CCCCCCCccEEEeccccccc----Chhhhccccccc
Q 027423 139 ---------------------------GIV--RVADIKFP----LPYRAKSFPLVIVSDALDYL----SPKYLNKTLPDL 181 (223)
Q Consensus 139 ---------------------------GiV--RvADIkfp----LPYR~kSFSlVIVSDaLDyL----spryLNkTLPeL 181 (223)
..| +.+|+.-. +|+...+|++|+...++.|+ ++..+-+.+-++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~ 206 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRI 206 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHH
Confidence 122 33444322 34677899999999999998 666777888888
Q ss_pred hhh-ccCceEEEeecCcch--hhccccchhHHHHHH
Q 027423 182 ARV-ASDGVLIFAGISSMF--HLMKFSSDTWTEIHA 214 (223)
Q Consensus 182 aRv-sadglViF~G~P~q~--~L~kfssswW~r~~~ 214 (223)
.|+ ..+|++|+.-.|-.- ...+.+..++..+..
T Consensus 207 ~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~ 242 (292)
T 3g07_A 207 YRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYR 242 (292)
T ss_dssp HHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHH
T ss_pred HHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhc
Confidence 886 457888886444221 333445555554443
No 76
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=93.41 E-value=0.068 Score=41.21 Aligned_cols=109 Identities=18% Similarity=0.144 Sum_probs=64.8
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCC-CCCCCCCccEEEe-cccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP-LPYRAKSFPLVIV-SDAL 166 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfp-LPYR~kSFSlVIV-SDaL 166 (223)
.-.+||.||..|-.....|.+....+.+|||+.+ ++-+..+++..-.+--+..+|+.-. .|+...+|++|+. +..+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 4468999999999888878665566889998764 2233333332211112233444321 1667789999987 5543
Q ss_pred --cccChhhhccccccchhhc-cCceEEEeecCcch
Q 027423 167 --DYLSPKYLNKTLPDLARVA-SDGVLIFAGISSMF 199 (223)
Q Consensus 167 --DyLspryLNkTLPeLaRvs-adglViF~G~P~q~ 199 (223)
.........+.|.++.|+= .+|.++|.-.....
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~ 175 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG 175 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHH
Confidence 1222222335578888874 57787777554443
No 77
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=93.37 E-value=0.14 Score=38.01 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=72.0
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCC-CCCC
Q 027423 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLP-YRAK 155 (223)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLP-YR~k 155 (223)
.+..|+......=.+||-+|-.|-.+...+++....+..|||..+ ++-+..+++..-- +--+..+|+.-.++ +...
T Consensus 33 l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 112 (189)
T 3p9n_A 33 LFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTS 112 (189)
T ss_dssp HHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSS
T ss_pred HHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCC
Confidence 345555432234468999999998877778877667889988653 4445555543211 11245566543222 3367
Q ss_pred CccEEEecccccccChhhhccccccchh---hccCceEEEee
Q 027423 156 SFPLVIVSDALDYLSPKYLNKTLPDLAR---VASDGVLIFAG 194 (223)
Q Consensus 156 SFSlVIVSDaLDyLspryLNkTLPeLaR---vsadglViF~G 194 (223)
+|++|+...... .....+.+.+.++.| +..+|++++.-
T Consensus 113 ~fD~i~~~~p~~-~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 113 PVDLVLADPPYN-VDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp CCSEEEECCCTT-SCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred CccEEEECCCCC-cchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 899887654422 224677888889987 77888888863
No 78
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=93.34 E-value=0.074 Score=40.62 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=65.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||-||-.+-.....|.+.-..+.-||++.+ ++.+..+.+..- .+=-+..+|+. .+|+ ..+|++|+..+++.
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVGATW 114 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECCChH
Confidence 358999999998877777765556778887643 344444443221 11224567774 3566 88999999999998
Q ss_pred ccChhhhccccccchhhcc-CceEEEe
Q 027423 168 YLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 168 yLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
++.. ..+.|-++.|+-. +|.++++
T Consensus 115 ~~~~--~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 115 IAGG--FAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp GTSS--SHHHHHHHTTSEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCeEEEEe
Confidence 8852 4566778888755 5666664
No 79
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=93.27 E-value=0.078 Score=40.99 Aligned_cols=97 Identities=19% Similarity=0.238 Sum_probs=60.0
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.+||-+|-.+-.....|.+....+..|||+.+ ++.+..+++..--.. -+..+|+..++|-. ..|++||+...+.++
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK-APYDVIIVTAGAPKI 171 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG-CCEEEEEECSBBSSC
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCC-CCccEEEECCcHHHH
Confidence 48999999987777766665447888888643 344444444321111 24556775555432 249999999998877
Q ss_pred Chhhhccccccchh-hccCceEEEe-ecCcc
Q 027423 170 SPKYLNKTLPDLAR-VASDGVLIFA-GISSM 198 (223)
Q Consensus 170 spryLNkTLPeLaR-vsadglViF~-G~P~q 198 (223)
.+ ++.| +..+|.++++ +.+..
T Consensus 172 ~~--------~~~~~L~pgG~lvi~~~~~~~ 194 (235)
T 1jg1_A 172 PE--------PLIEQLKIGGKLIIPVGSYHL 194 (235)
T ss_dssp CH--------HHHHTEEEEEEEEEEECSSSS
T ss_pred HH--------HHHHhcCCCcEEEEEEecCCC
Confidence 54 3444 4456777766 44443
No 80
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=93.17 E-value=0.084 Score=44.23 Aligned_cols=102 Identities=12% Similarity=0.131 Sum_probs=72.0
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCC-CCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY-RAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPY-R~kSFSlVIVSDaLDyL 169 (223)
.+||-+|..|-..-..|.+. ..+..|||+.+ ++-+..+++... --+++.|+.++++- -..+|.+|+.+.++.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 58999999988766666654 56888888754 344444443321 11334444442232 24689999999999999
Q ss_pred ChhhhccccccchhhccCceEEEeecCc
Q 027423 170 SPKYLNKTLPDLARVASDGVLIFAGISS 197 (223)
Q Consensus 170 spryLNkTLPeLaRvsadglViF~G~P~ 197 (223)
.+..+.+.|.++.|+-..|.++++-.++
T Consensus 124 ~~~~~~~~l~~l~~lLPGG~l~lS~~~g 151 (261)
T 3iv6_A 124 TTEEARRACLGMLSLVGSGTVRASVKLG 151 (261)
T ss_dssp CHHHHHHHHHHHHHHHTTSEEEEEEEBS
T ss_pred CHHHHHHHHHHHHHhCcCcEEEEEeccC
Confidence 9999999999999977999999985555
No 81
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=93.06 E-value=0.11 Score=38.97 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=63.5
Q ss_pred cceeeeecCCcchhhhhcccccc--cccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee--tEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
-.+||.+|..+-.....|.+... .+..|||+.+ ++-+..+++..--.. -+..+|+.-++| ...+|++||+...+
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAAG 156 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSBB
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCch
Confidence 35899999998877777776553 6888888653 233333333221111 234567654444 25689999999999
Q ss_pred cccChhhhccccccchhh-ccCceEEEeecCcchhhccc
Q 027423 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGISSMFHLMKF 204 (223)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~P~q~~L~kf 204 (223)
.++.. ++.|+ ..+|.++++=.++.+++.++
T Consensus 157 ~~~~~--------~~~~~L~pgG~lv~~~~~~~~~~~~~ 187 (215)
T 2yxe_A 157 PKIPE--------PLIRQLKDGGKLLMPVGRYLQRLVLA 187 (215)
T ss_dssp SSCCH--------HHHHTEEEEEEEEEEESSSSEEEEEE
T ss_pred HHHHH--------HHHHHcCCCcEEEEEECCCCcEEEEE
Confidence 87753 44443 45677777633333555554
No 82
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=93.03 E-value=0.12 Score=39.47 Aligned_cols=97 Identities=14% Similarity=0.126 Sum_probs=64.6
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.-.+||.+|-.+-.....|.+.- ..+..|||+.+ +.-..++....+--+..+|+.- +| -..+|++|+..+++.++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD--DMLEKAADRLPNTNFGKADLAT-WK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH--HHHHHHHHHSTTSEEEECCTTT-CC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHhCCCcEEEECChhh-cC-ccCCcCEEEEeCchhhC
Confidence 34689999999888777666552 56788887653 1112222222233456777753 45 57899999999999999
Q ss_pred Chhhhccccccchhhcc-CceEEEe
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~ 193 (223)
. ...+.|.++.|+-. +|.++++
T Consensus 109 ~--~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 109 P--DHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp T--THHHHHHHHGGGEEEEEEEEEE
T ss_pred C--CHHHHHHHHHHhcCCCeEEEEE
Confidence 4 35677888888755 5666665
No 83
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=92.96 E-value=0.32 Score=37.27 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=62.6
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCC-CCCccEEEecccccc
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYR-AKSFPLVIVSDALDY 168 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR-~kSFSlVIVSDaLDy 168 (223)
..-.+||-||-.|......|.+. ..+..||++.+ +.-..++....+--+..+|+.-++|+. ..+|++|+.+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~----- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSP--ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR----- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCH--HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----
Confidence 34468999999998877777766 56888988754 122223322233346678887778988 8899999887
Q ss_pred cChhhhccccccchhhcc-CceEE
Q 027423 169 LSPKYLNKTLPDLARVAS-DGVLI 191 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglVi 191 (223)
....+.|.++.|+-. +|.++
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEE
Confidence 235567778887654 56665
No 84
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=92.85 E-value=0.29 Score=38.04 Aligned_cols=92 Identities=23% Similarity=0.223 Sum_probs=58.8
Q ss_pred cccceeeeecCCcchhhhhcccc-ccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
..-.+||-+|..+-.....|++. ...+..|||+.+ +.-..++....+--+.++|+. .+|+...+|++|+..++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK--VAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH--HHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCCh--
Confidence 34468999999996666666655 256888988753 122222222222245667764 467778899999987652
Q ss_pred cChhhhccccccchhhcc-CceEEEe
Q 027423 169 LSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~ 193 (223)
..+.++.|+-. +|.+++.
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITA 177 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEE
T ss_pred -------hhHHHHHHhcCCCcEEEEE
Confidence 34677777755 5666655
No 85
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=92.79 E-value=0.41 Score=36.26 Aligned_cols=102 Identities=18% Similarity=0.262 Sum_probs=65.7
Q ss_pred hhhHHHHHhccccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccE
Q 027423 80 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPL 159 (223)
Q Consensus 80 aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSl 159 (223)
.+..|++.-. -.+||.+|..+......|.+. .|+|+.+ +.-..|+.. .--+..+|+. .+|+...+|++
T Consensus 38 ~~~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~--~~~~~a~~~--~~~~~~~d~~-~~~~~~~~fD~ 105 (219)
T 1vlm_A 38 ELQAVKCLLP--EGRGVEIGVGTGRFAVPLKIK-----IGVEPSE--RMAEIARKR--GVFVLKGTAE-NLPLKDESFDF 105 (219)
T ss_dssp HHHHHHHHCC--SSCEEEETCTTSTTHHHHTCC-----EEEESCH--HHHHHHHHT--TCEEEECBTT-BCCSCTTCEEE
T ss_pred HHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHH-----hccCCCH--HHHHHHHhc--CCEEEEcccc-cCCCCCCCeeE
Confidence 3444544433 458999999998887777765 6776543 111222221 2234456663 46777889999
Q ss_pred EEecccccccChhhhccccccchhhcc-CceEEEeec
Q 027423 160 VIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGI 195 (223)
Q Consensus 160 VIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~ 195 (223)
|+..+.|.++. -..+.|-++.|+-. +|.++++..
T Consensus 106 v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 106 ALMVTTICFVD--DPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp EEEESCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchHhhcc--CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99999999984 23567778887754 567666643
No 86
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=92.67 E-value=0.14 Score=37.74 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=60.7
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCC--CCCCCCC-ccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP--LPYRAKS-FPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfp--LPYR~kS-FSlVIVSDaLDyL 169 (223)
.+||.+|..+......|.+. ..+..|||+.+ ..-..++.. .+.-+...|+.-. .|..... |++|+.+.++.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-GIEAVGVDGDR--TLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCH--HHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 79999999999888777776 56788887753 222223322 2222334443221 2444554 99999999998
Q ss_pred Chhhhccccccchhhcc-CceEEEe
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~ 193 (223)
.....+.|.++.|+-. +|.++++
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEE
Confidence 3455578888888765 5666665
No 87
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=92.61 E-value=0.015 Score=48.99 Aligned_cols=103 Identities=16% Similarity=0.241 Sum_probs=67.1
Q ss_pred HHHHHhcc-ccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeee-----eecCCCCCCCCC
Q 027423 83 ILKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVA-----DIKFPLPYRAKS 156 (223)
Q Consensus 83 ~LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvA-----DIkfpLPYR~kS 156 (223)
.+.+.++. .-.+||-||-.+-.....|.+ ...+..||||.+ +.-..++. +|+--.. |.--.+|+...+
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~--~~~~~a~~---~~~~~~~~~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSS--GVAAKARE---KGIRVRTDFFEKATADDVRRTEGP 171 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTTTHHHHHH-TTCEEEEECCCH--HHHHHHHT---TTCCEECSCCSHHHHHHHHHHHCC
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHH-cCCcEEEECCCH--HHHHHHHH---cCCCcceeeechhhHhhcccCCCC
Confidence 33344442 345899999999887666665 456899998853 22222332 2321111 111234666789
Q ss_pred ccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
|++|+..++|.|+. .+++.|-++.|+-. +|++++.
T Consensus 172 fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 172 ANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp EEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEE
Confidence 99999999999995 67889999999865 5566654
No 88
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=92.56 E-value=0.082 Score=36.79 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=64.6
Q ss_pred ccceeeeecCCcchhhhhcccc--ccccccccccccccchhHHHHhhhhhcceeeeeecCC-----CC--CCCCCccEEE
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP-----LP--YRAKSFPLVI 161 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfp-----LP--YR~kSFSlVI 161 (223)
.-.+||.+|..+......|.+. .+.+..|+|+-++.+. .+--+..+|+.-. +| +...+|++|+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI--------VGVDFLQGDFRDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC--------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc--------CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence 3458999999998888777776 2478999998775433 1222345566432 11 5568999999
Q ss_pred ecccccccChhh---------hccccccchhh-ccCceEEEeecCc
Q 027423 162 VSDALDYLSPKY---------LNKTLPDLARV-ASDGVLIFAGISS 197 (223)
Q Consensus 162 VSDaLDyLspry---------LNkTLPeLaRv-sadglViF~G~P~ 197 (223)
....+.+..-.. ..+.+.++.|+ ..+|.++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 877776654321 14566677665 4567888765544
No 89
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.17 E-value=0.21 Score=42.17 Aligned_cols=102 Identities=23% Similarity=0.152 Sum_probs=70.7
Q ss_pred ccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhh--c-----c--eeeeeecCC-----CCC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--G-----I--VRVADIKFP-----LPY 152 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrK--G-----i--VRvADIkfp-----LPY 152 (223)
.-.+||-+|..|-.....|.+. ...+..||++.+ ++-+..+.+..-.+ | - +..+|+.-. .|+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 3458999999998877777776 456889998754 34455555443222 3 2 345666432 177
Q ss_pred CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEee
Q 027423 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 153 R~kSFSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~G 194 (223)
...+|++|+...++.++.. ..+.|.++.|+= .+|.++++-
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEE
Confidence 7899999999999999853 467888888875 467777763
No 90
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=91.88 E-value=0.26 Score=39.93 Aligned_cols=102 Identities=12% Similarity=0.172 Sum_probs=60.6
Q ss_pred ceeeeecCCcchhhhhcccccccccccccc-c--cccchhHHH-----Hhhhh----hcceeeeeecC-----CCC-C-C
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP-Y--DIEDADARC-----KSLVH----KGIVRVADIKF-----PLP-Y-R 153 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEP-y--diedad~~C-----KsLVr----KGiVRvADIkf-----pLP-Y-R 153 (223)
.+||.+|-.|..+--.|.+....+..||+. . -++-+..|+ +..-- ++-|++..... .++ + .
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 489999999877655666655457888886 3 244455555 22100 01244321111 011 0 3
Q ss_pred CCCccEEEecccccccChhhhccccccchhhcc------CceEEEeecC
Q 027423 154 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVAS------DGVLIFAGIS 196 (223)
Q Consensus 154 ~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsa------dglViF~G~P 196 (223)
..+|++||.+|.+-+ +..+.+.+.++.|+-. +|.++++-.|
T Consensus 161 ~~~fD~Ii~~dvl~~--~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 161 LQRFQVVLLADLLSF--HQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp CSSBSEEEEESCCSC--GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred CCCCCEEEEeCcccC--hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 578999999999876 4556677788888655 8865554334
No 91
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.76 E-value=0.29 Score=39.82 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=71.7
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhh-hhhcc---ee--eeeecCCCCC
Q 027423 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSL-VHKGI---VR--VADIKFPLPY 152 (223)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsL-VrKGi---VR--vADIkfpLPY 152 (223)
+|.+-+.|. ..-.+||-||-.|-.....|++.- ..+..|+ |++++-...+.- .+.|+ |+ ..|+--|+|-
T Consensus 158 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~ 234 (332)
T 3i53_A 158 YTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA 234 (332)
T ss_dssp HTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC
Confidence 344444554 345799999999998888888753 3455555 444433333332 22232 44 4566546664
Q ss_pred CCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 153 R~kSFSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
+|++|+.+++|.|.+....-+.|-++.|+ ..+|.+++.
T Consensus 235 ---~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 235 ---GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp ---SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred ---CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 89999999999999998888888888886 557777665
No 92
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=91.68 E-value=0.37 Score=36.44 Aligned_cols=94 Identities=15% Similarity=0.058 Sum_probs=58.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
-.+||.+|..+-.....|.+.. .+..|||+-+ ++-+..+++..- +=-+..+|+.-++| ...+|++||+...+.++
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 3589999999977666666554 7788888642 222333332211 11244566654444 45789999999999887
Q ss_pred Chhhhccccccchhh-ccCceEEEeecC
Q 027423 170 SPKYLNKTLPDLARV-ASDGVLIFAGIS 196 (223)
Q Consensus 170 spryLNkTLPeLaRv-sadglViF~G~P 196 (223)
.. ++.|+ ..+|.+++.-.+
T Consensus 148 ~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 148 LC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CH--------HHHHTEEEEEEEEEEECS
T ss_pred HH--------HHHHHcCCCcEEEEEEcC
Confidence 63 34443 456777776333
No 93
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.63 E-value=0.19 Score=40.06 Aligned_cols=99 Identities=11% Similarity=0.161 Sum_probs=69.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||-||-.+-.....|.+.-..+..||++-+ ++-+..+++..--. =-+..+|+. .+ ..+|++|+...++.
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSLGAFE 148 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEESCGG
T ss_pred cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEcchHH
Confidence 358999999998888888777347788887643 33344444332111 114566764 23 78999999999999
Q ss_pred cc-------Chhhhccccccchhhc-cCceEEEee
Q 027423 168 YL-------SPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 168 yL-------spryLNkTLPeLaRvs-adglViF~G 194 (223)
++ .++.+.+.|.++.|+- .+|.+++..
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99 6688889999999865 466776653
No 94
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=91.34 E-value=0.12 Score=40.01 Aligned_cols=95 Identities=14% Similarity=0.189 Sum_probs=62.1
Q ss_pred ceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhcceeeeeecCC---CCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfp---LPYR~kSFSlVIVSDaL 166 (223)
.+||-+|-.|-.....|.+. ...+..|||+-+ ++.+..+++.. ..=....+|+.-| +|.. .+|++|+ .
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~-~--- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY-E--- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-E---
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-E---
Confidence 47999999998887777776 346889998765 46666666654 2212345677654 3443 6899998 2
Q ss_pred cccChhhhccccccchh-hccCceEEEe
Q 027423 167 DYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~ 193 (223)
|.-.|......|.++.| +..+|.++++
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 33344333444777775 4567888775
No 95
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=90.91 E-value=0.17 Score=38.65 Aligned_cols=104 Identities=13% Similarity=0.036 Sum_probs=68.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.+||-+|-.|-.+--.+++....+..|||..+ ++-+..|++..- .+--+..+|+.-.+|....+|++|+..-. |-
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p--~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP--FR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS--SS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC--CC
Confidence 58999999998877777777656888887542 444555554321 11124557765556666779998876433 22
Q ss_pred Chhhhccccccchh---hccCceEEEeecCcch
Q 027423 170 SPKYLNKTLPDLAR---VASDGVLIFAGISSMF 199 (223)
Q Consensus 170 spryLNkTLPeLaR---vsadglViF~G~P~q~ 199 (223)
.....+.+.++.+ +..+|++++.-.+.+.
T Consensus 134 -~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 134 -RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp -TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred -CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 3445566777776 7889999988766544
No 96
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.74 E-value=0.34 Score=38.96 Aligned_cols=103 Identities=14% Similarity=0.048 Sum_probs=67.5
Q ss_pred cccceeeeecCCcchhhhhcc--cccccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEec
Q 027423 90 DSMHKVLHVGPDTCSVVSTLL--KEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVS 163 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LL--kEeetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~kSFSlVIVS 163 (223)
..-.+||-||-.+-.....|. +....+..|||+.+ ++-+..+++..--.+ -+..+|+.- +|+. .+|++|+..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LDTR-EGYDLLTSN 194 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CCCC-SCEEEEECC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CCcc-CCeEEEEEC
Confidence 334679999999988887773 45567888887642 233333333211111 245567643 4554 899999999
Q ss_pred cccccc-Chhhhccccccchhhc-cCceEEEee
Q 027423 164 DALDYL-SPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 164 DaLDyL-spryLNkTLPeLaRvs-adglViF~G 194 (223)
..+.|+ +|...-+.|-++.|+= .+|.++++.
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999998 6766556778888764 466777653
No 97
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=90.69 E-value=0.37 Score=35.90 Aligned_cols=98 Identities=11% Similarity=0.054 Sum_probs=59.7
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.-.+||.+|-.+..+...|.+....+..|||.-+ ++.+..+++ +--+..+|+.- +| .+|++||....+.+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~-~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE-IS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG-CC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH-CC---CCeeEEEECCCchh
Confidence 3458999999999887777766555688888642 333444433 33456677653 44 78999998877777
Q ss_pred cChhhhccccccchhhccCceEEEeecCcc
Q 027423 169 LSPKYLNKTLPDLARVASDGVLIFAGISSM 198 (223)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~G~P~q 198 (223)
+...-..+.+-++.|+. |.++..-.|+.
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~~~~~ 150 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIGNAKA 150 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEEEGGG
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEEcCch
Confidence 76433335566777776 55554445544
No 98
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=90.14 E-value=0.35 Score=35.34 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=58.6
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc--ee--eeeecCCCCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi--VR--vADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.+||-+|-.|-.....|.+. ..+..|||..+ ++-+..+++.. |+ |+ .+|..--.++-..+|++|+.+ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~---~~~~v~~~~~~~~~l~~~~~~~fD~v~~~--~ 97 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDL---GIENTELILDGHENLDHYVREPIRAAIFN--L 97 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHH---TCCCEEEEESCGGGGGGTCCSCEEEEEEE--E
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCcHHHHHhhccCCcCEEEEe--C
Confidence 57999999997777667666 78889988654 44555555532 32 22 244433222447899999654 2
Q ss_pred cccCh---------hhhccccccchh-hccCceEEEeecCcch
Q 027423 167 DYLSP---------KYLNKTLPDLAR-VASDGVLIFAGISSMF 199 (223)
Q Consensus 167 DyLsp---------ryLNkTLPeLaR-vsadglViF~G~P~q~ 199 (223)
.|+.+ .-.-+.|.++.| +..+|.++++-++++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 44432 222344566666 4567888888777653
No 99
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=89.82 E-value=0.22 Score=39.76 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=66.2
Q ss_pred hhhhHHHHHhc--cccceeeeecCCcchhh----hhccccc-cc--ccccccccc--ccchhHHHHhhhhhc--ceee--
Q 027423 79 RAIPILKKAYG--DSMHKVLHVGPDTCSVV----STLLKEE-ET--EAWGVEPYD--IEDADARCKSLVHKG--IVRV-- 143 (223)
Q Consensus 79 ~aiP~LkkaYG--dsM~kVLHVGPdtC~VV----s~LLkEe-et--EAWGVEPyd--iedad~~CKsLVrKG--iVRv-- 143 (223)
+.+|-+-+..| ..=.+||-||-.|-.+- +.++... .. +..||||-+ ++.+..+.+.. .| .|++
T Consensus 38 ~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~--~~~~~v~~~~ 115 (292)
T 2aot_A 38 KKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT--SNLENVKFAW 115 (292)
T ss_dssp HTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC--SSCTTEEEEE
T ss_pred HhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc--cCCCcceEEE
Confidence 34554433344 23348999999998643 3333321 22 237888764 22233222210 12 2332
Q ss_pred --eeec-CC----CCCCCCCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 144 --ADIK-FP----LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 144 --ADIk-fp----LPYR~kSFSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
+|+. ++ -|+...+|++|+.+.+|.|+. .+.++|-++.|+ ..+|.++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 116 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp ECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEE
T ss_pred EecchhhhhhhhccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEE
Confidence 2321 22 135678999999999999996 467899999998 667777776
No 100
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=89.81 E-value=0.16 Score=38.89 Aligned_cols=103 Identities=10% Similarity=0.044 Sum_probs=66.1
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh---hhcceeeeeecCCCCC-CCCC-ccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV---HKGIVRVADIKFPLPY-RAKS-FPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV---rKGiVRvADIkfpLPY-R~kS-FSlVIVSDa 165 (223)
.+||-+|-.|-.+.-.+++....+..|||..+ ++-+..|++..- .+--+..+|+.-.+|. ...+ |++|+....
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP 134 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC
Confidence 58999999888776667777666889988653 445555554321 1112445666433443 3568 998886544
Q ss_pred ccccChhhhccccccchh---hccCceEEEeecCcc
Q 027423 166 LDYLSPKYLNKTLPDLAR---VASDGVLIFAGISSM 198 (223)
Q Consensus 166 LDyLspryLNkTLPeLaR---vsadglViF~G~P~q 198 (223)
|- ...+.+.+.++.+ +..+|+++++-.|..
T Consensus 135 --~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 --FH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 22 3345566777744 678899999877765
No 101
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=89.36 E-value=0.063 Score=39.06 Aligned_cols=104 Identities=11% Similarity=0.049 Sum_probs=65.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||-+|-.+......+++....+.+|||+.+ ++.+..+++..- .+--+..+|+.-.+|.-.++|++|+......
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 358999999999988888877667899998653 444555554431 1223455777555565556799988653321
Q ss_pred ccChhhhccccccch--h-hccCceEEEeecCcc
Q 027423 168 YLSPKYLNKTLPDLA--R-VASDGVLIFAGISSM 198 (223)
Q Consensus 168 yLspryLNkTLPeLa--R-vsadglViF~G~P~q 198 (223)
.....+.+..++ | +..+|++++.-.+.+
T Consensus 112 ---~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 112 ---KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 122344455553 3 567888888754443
No 102
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=89.32 E-value=0.06 Score=41.16 Aligned_cols=99 Identities=7% Similarity=-0.040 Sum_probs=66.6
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcc--eeeeeecC---CCCCCC-CCccEEEeccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI--VRVADIKF---PLPYRA-KSFPLVIVSDA 165 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGi--VRvADIkf---pLPYR~-kSFSlVIVSDa 165 (223)
-.+||-+|..|......|.+... +..||++.+ ++-..++......- +..+|+.- +.++.. .+|.+|+...+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSK--SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS-CEEEEESCH--HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCH--HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 35799999999988888877655 788887643 23333443333222 34455532 222221 24899999999
Q ss_pred ccccChhhhccccccchhhcc-CceEEEe
Q 027423 166 LDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
+.++++..+.+.|-++.|+-. +|.+++.
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999999999999999765 5655544
No 103
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=89.30 E-value=1.9 Score=35.45 Aligned_cols=107 Identities=19% Similarity=0.175 Sum_probs=70.8
Q ss_pred hhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---e--eeeeecCCCCC
Q 027423 81 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLPY 152 (223)
Q Consensus 81 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKGi---V--RvADIkfpLPY 152 (223)
++.+-+.++ ..-.+||-||-.+-.....|++.- +.+..|++. +++-..++... +.|+ | ...|+.- +|+
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 254 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL---PGAIDLVNENAAEKGVADRMRGIAVDIYK-ESY 254 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCTTTEEEEECCTTT-SCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec---HHHHHHHHHHHHhcCCCCCEEEEeCcccc-CCC
Confidence 444555554 345799999999998888887764 456777765 33333333322 2232 3 3456532 244
Q ss_pred CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 153 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 153 R~kSFSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
. .+++|+.+..|.++++....+.|-++.|+- .+|.+++.
T Consensus 255 ~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 255 P--EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp C--CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred C--CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 349999999999999888888888888874 56777655
No 104
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=89.00 E-value=0.53 Score=34.81 Aligned_cols=99 Identities=12% Similarity=-0.028 Sum_probs=59.1
Q ss_pred ceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||.+|..+-.....|.+. ...+..|||+.+ ++-+..+++.+--+. -+..+|+.-.. ...+|++|+. +.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~-~~~~~ 143 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVIS-RAFAS 143 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEEC-SCSSS
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEE-eccCC
Confidence 48999999998887777765 356888988653 334444444331111 13345554332 3478999984 44322
Q ss_pred cChhhhccccccchhh-ccCceEEEeecCcch
Q 027423 169 LSPKYLNKTLPDLARV-ASDGVLIFAGISSMF 199 (223)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~P~q~ 199 (223)
+.+.+.++.|+ ..+|.+++.-.+.|.
T Consensus 144 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~ 170 (207)
T 1jsx_A 144 -----LNDMVSWCHHLPGEQGRFYALKGQMPE 170 (207)
T ss_dssp -----HHHHHHHHTTSEEEEEEEEEEESSCCH
T ss_pred -----HHHHHHHHHHhcCCCcEEEEEeCCCch
Confidence 34555556554 557887777444444
No 105
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=88.98 E-value=0.37 Score=38.18 Aligned_cols=55 Identities=18% Similarity=0.147 Sum_probs=41.9
Q ss_pred eeeeeecCCCCCC---CCCccEEEecccccccCh--hhhccccccchhh-ccCceEEEeec
Q 027423 141 VRVADIKFPLPYR---AKSFPLVIVSDALDYLSP--KYLNKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 141 VRvADIkfpLPYR---~kSFSlVIVSDaLDyLsp--ryLNkTLPeLaRv-sadglViF~G~ 195 (223)
+..+|+.-+.|+- ..+|.+|+.+-+|+|+.| .-+-+.|.+++|+ -..|.+||++.
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6688888765643 458999999999999754 4455688888884 56788888864
No 106
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=88.87 E-value=0.36 Score=36.88 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=59.0
Q ss_pred ceeeeecCCcchhhhhcccccc-------cccccccccc--ccchhHHHHhhh------hhcceeeeeecCCCCCCCCCc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEE-------TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSF 157 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEee-------tEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLPYR~kSF 157 (223)
.+||.+|-.+......|.+.-. .+..|||+.+ ++-+..+.+..- .+=-+..+|+.-++|- ..+|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCc
Confidence 4899999999777766665332 4888998654 444555544331 1112456777665443 2689
Q ss_pred cEEEecccccccChhhhccccccchh-hccCceEEEe
Q 027423 158 PLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 158 SlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~ 193 (223)
++|++..++..+. .++.| +..+|.+++.
T Consensus 165 D~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 165 NAIHVGAAAPDTP--------TELINQLASGGRLIVP 193 (227)
T ss_dssp EEEEECSCBSSCC--------HHHHHTEEEEEEEEEE
T ss_pred cEEEECCchHHHH--------HHHHHHhcCCCEEEEE
Confidence 9999999887654 33444 3567877776
No 107
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=88.78 E-value=0.52 Score=38.95 Aligned_cols=107 Identities=18% Similarity=0.181 Sum_probs=69.7
Q ss_pred hHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCc
Q 027423 82 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF 157 (223)
Q Consensus 82 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKG--iVRvADIkfpLPYR~kSF 157 (223)
+.+-+.|. ..-.+||-||-.+-.....|++.- +.+..|++.-++-. ..+.+..-..+ -+...|+--|+| +|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~-~~~~~~~~~~~~v~~~~~d~~~~~p----~~ 248 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA-RHRLDAPDVAGRWKVVEGDFLREVP----HA 248 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT-TCCCCCGGGTTSEEEEECCTTTCCC----CC
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh-cccccccCCCCCeEEEecCCCCCCC----CC
Confidence 34445554 345689999999999888888753 44555655422211 11111000011 234567765777 89
Q ss_pred cEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 158 PLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 158 SlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
++|+.+++|.++++...-+.|-++.|+= .+|.+++.
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999999999999888888899998874 46776664
No 108
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=88.54 E-value=0.23 Score=41.16 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=65.6
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhh---h--hhcceeeeee
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADI 146 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsL---V--rKGiVRvADI 146 (223)
.|.+..+|.+.. ..-.+||.+|-.+..+...+++. ...+..+||.-+ ++-+..+.+.+ . .+=-+..+|.
T Consensus 77 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~ 153 (296)
T 1inl_A 77 HEMLAHVPMFLH---PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG 153 (296)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred HHHHhHHHHhcC---CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 355555565532 23379999999999999999987 346777777532 23333333321 1 1112445665
Q ss_pred cCCCCCCCCCccEEEecccccc-cChh---hhccccccchh-hccCceEEEe-ecC
Q 027423 147 KFPLPYRAKSFPLVIVSDALDY-LSPK---YLNKTLPDLAR-VASDGVLIFA-GIS 196 (223)
Q Consensus 147 kfpLPYR~kSFSlVIVSDaLDy-Lspr---yLNkTLPeLaR-vsadglViF~-G~P 196 (223)
.-.++...++|++||+ |+.|. ..|. |.-+.+.++.| +..+|++++. +.|
T Consensus 154 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 154 AEYVRKFKNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp HHHGGGCSSCEEEEEE-EC----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred HHHHhhCCCCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 4345555678999885 66554 3221 22233444444 4678888876 445
No 109
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=88.42 E-value=0.28 Score=40.17 Aligned_cols=117 Identities=21% Similarity=0.290 Sum_probs=66.4
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhh---h--hhcceeeeeec
Q 027423 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADIK 147 (223)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsL---V--rKGiVRvADIk 147 (223)
|.+..+|.+.. ..-++||.+|-.+..+...+++. ...+.-+||.-+ ++-+..+.+.+ . .+=-+..+|..
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~ 139 (275)
T 1iy9_A 63 EMVAHVPLFTH---PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGF 139 (275)
T ss_dssp HHHHHHHHHHS---SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSH
T ss_pred HHHHHHHHhhC---CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHH
Confidence 44445555432 24579999999999999999987 346677776432 22233333221 0 11135566754
Q ss_pred CCCCCCCCCccEEEecccccccChh-hh--ccccccch-hhccCceEEEe-ecC
Q 027423 148 FPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLA-RVASDGVLIFA-GIS 196 (223)
Q Consensus 148 fpLPYR~kSFSlVIVSDaLDyLspr-yL--NkTLPeLa-RvsadglViF~-G~P 196 (223)
--|+-..++|++||+ |..+...|. .| ..-+.++. .+..+|++++. +.|
T Consensus 140 ~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 140 MHIAKSENQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp HHHHTCCSCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT
T ss_pred HHHhhCCCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 334444678999887 776643321 11 12233444 35678888876 445
No 110
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=88.15 E-value=0.35 Score=39.26 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=65.1
Q ss_pred cceeeeecCCcchhhhhccccccccccccccccc--cchhHHHHh------------------hhhhcceeeeeecCCCC
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKS------------------LVHKGIVRVADIKFPLP 151 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydi--edad~~CKs------------------LVrKGiVRvADIkfpLP 151 (223)
=.+||-+|=.+=.....|.+. .-+..||+..+- +.|....+. .-.+--+.++|+ +-+|
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~l~ 146 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FDLP 146 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TTGG
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc-ccCC
Confidence 358999998876666555554 557888887642 223222210 001112456787 4577
Q ss_pred CCC-CCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 152 YRA-KSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 152 YR~-kSFSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
... .+|.+|+...+|.+|.+.-..+.+-+++|+= ..|.++++
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 653 7999999999999998877777788888855 45666443
No 111
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=87.84 E-value=0.25 Score=37.82 Aligned_cols=94 Identities=15% Similarity=0.058 Sum_probs=63.8
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh-------------hhhhcceeeeeecCCCCCCC-CC
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS-------------LVHKGIVRVADIKFPLPYRA-KS 156 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs-------------LVrKGiVRvADIkfpLPYR~-kS 156 (223)
.+||-+|=.|=.....|.+. ..+..||+..+ |+-+..+.+. ...+--+..+|+ +-+|+.. .+
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~~~ 101 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDIGH 101 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHHHS
T ss_pred CEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccCCC
Confidence 58999998887777666665 45788887654 3333332210 000112456776 3566654 79
Q ss_pred ccEEEecccccccChhhhccccccchhhccCc
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVASDG 188 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvsadg 188 (223)
|++|+...++.++.+.-..+.+-+++|+=..|
T Consensus 102 fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg 133 (203)
T 1pjz_A 102 CAAFYDRAAMIALPADMRERYVQHLEALMPQA 133 (203)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE
T ss_pred EEEEEECcchhhCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999877777889999976654
No 112
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=87.62 E-value=0.66 Score=40.30 Aligned_cols=122 Identities=13% Similarity=0.097 Sum_probs=75.4
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCC
Q 027423 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP 151 (223)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLP 151 (223)
|..+.+.+|-..+.-...-.+||-+|-.+..+...|.+. ..+.+|||.-+ ++-+..|++..--..-+..+|+.-. +
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~-~ 293 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA-L 293 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-S
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc-c
Confidence 445566665332211223458999999998887777776 56888888643 3445555543322234566777543 3
Q ss_pred CCCCCccEEEecccccc---cChhhhccccccchh-hccCceEEEeecCc
Q 027423 152 YRAKSFPLVIVSDALDY---LSPKYLNKTLPDLAR-VASDGVLIFAGISS 197 (223)
Q Consensus 152 YR~kSFSlVIVSDaLDy---LspryLNkTLPeLaR-vsadglViF~G~P~ 197 (223)
....+|++||....+.+ .....+.+.+.++.| +..+|.+++..++.
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 34689999998766554 333444455556555 46788888887664
No 113
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=87.21 E-value=0.56 Score=37.34 Aligned_cols=96 Identities=17% Similarity=0.113 Sum_probs=60.5
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhh--hhhcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL--VHKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsL--VrKGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.+||-+|-.+-.....|++. ...+..|+|+.+ ++.+..+++.. ..+=-+..+|+.-++ ...+|++||. |.-
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--~~~~fD~Vi~-~~~ 188 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI--SDQMYDAVIA-DIP 188 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC--CSCCEEEEEE-CCS
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC--cCCCccEEEE-cCc
Confidence 58999999988877777765 356888888643 44455555433 011123456665544 4678999987 321
Q ss_pred cccChhhhccccccchh-hccCceEEEeecCc
Q 027423 167 DYLSPKYLNKTLPDLAR-VASDGVLIFAGISS 197 (223)
Q Consensus 167 DyLspryLNkTLPeLaR-vsadglViF~G~P~ 197 (223)
...+.|.++.| +..+|.++++..+.
T Consensus 189 ------~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 189 ------DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ------CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 22466777777 46678887776444
No 114
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=87.14 E-value=0.28 Score=40.84 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=66.9
Q ss_pred ceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccc-
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY- 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy- 168 (223)
.+||.+|-.+..+...|.+... .+..|||..+ ++-+..+++..--..-+..+|+- ..+ ..+|++|+....+.+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-~~~--~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVF-SEV--KGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT-TTC--CSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccc-ccc--cCCeeEEEECCCcccC
Confidence 4899999999998888877653 4788888654 45555555543222334566762 222 679999999887765
Q ss_pred --cChhhhccccccchhh-ccCceEEEeec
Q 027423 169 --LSPKYLNKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 169 --LspryLNkTLPeLaRv-sadglViF~G~ 195 (223)
.+.....+.+-++.|+ ..+|.+++..+
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 2344456667777775 56788887754
No 115
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=86.45 E-value=0.5 Score=39.01 Aligned_cols=94 Identities=11% Similarity=0.110 Sum_probs=65.2
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
...+||.||-.+-.....|++.- ..+..|++. +++-..++.+ .+ -+...|+.-++| .|++|+.+++|.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~p----~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSGS--NNLTYVGGDMFTSIP----NADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCB--TTEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhcccC--CCcEEEeccccCCCC----CccEEEeehhhcc
Confidence 34689999999999888888653 445666654 3333333332 22 133467633666 3999999999999
Q ss_pred cChhhhccccccchhhcc----CceEEEe
Q 027423 169 LSPKYLNKTLPDLARVAS----DGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa----dglViF~ 193 (223)
++....-+.|-++.|+=. +|.+++.
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 988777788888888744 6877776
No 116
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=86.24 E-value=1.3 Score=32.60 Aligned_cols=107 Identities=11% Similarity=0.080 Sum_probs=62.8
Q ss_pred ccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSD 164 (223)
.-.+||-+|..+-.....|++. ...+..|||..+ ++-+..+++..- .+=-+..+|+.-..++-..+|++|+..-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 3458999999998877777776 346888988653 344444443321 1112445665433335558999998653
Q ss_pred cc-c------ccChhhhccccccchhh-ccCceEEEeecCc
Q 027423 165 AL-D------YLSPKYLNKTLPDLARV-ASDGVLIFAGISS 197 (223)
Q Consensus 165 aL-D------yLspryLNkTLPeLaRv-sadglViF~G~P~ 197 (223)
.+ . .-.+...-+.+-++.|+ ..+|.++++.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 22 0 01122222356666664 5678888887665
No 117
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=86.20 E-value=0.89 Score=38.06 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=68.6
Q ss_pred CCccchHHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh-----h-hhc
Q 027423 69 GDFSCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL-----V-HKG 139 (223)
Q Consensus 69 g~~sCt~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsL-----V-rKG 139 (223)
.|.....|.+..+|.+.. ..-++||.+|-.++.+...|++.. ..+..+||.-+ ++-+..+.+.+ - .+=
T Consensus 64 ~de~~Y~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv 140 (294)
T 3adn_A 64 RDEFIYHEMMTHVPLLAH---GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRF 140 (294)
T ss_dssp TTHHHHHHHHHHHHHHHS---TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTC
T ss_pred CchhHHHHHHHHHHHhcC---CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCce
Confidence 344444666666666532 345799999999999999999874 45677777532 23233333222 0 123
Q ss_pred ceeeeeecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-ecC
Q 027423 140 IVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GIS 196 (223)
Q Consensus 140 iVRvADIkfpLPYR~kSFSlVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~P 196 (223)
-+.++|..-.++....+|++||+ |.-|-..|. .| ...+-++.| +..+|++++. +.|
T Consensus 141 ~~~~~D~~~~l~~~~~~fDvIi~-D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 141 KLVIDDGVNFVNQTSQTFDVIIS-DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp CEECSCSCC---CCCCCEEEEEE-CC----------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred EEEEChHHHHHhhcCCCccEEEE-CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 46678876556666789998877 665543332 11 223334444 4667877775 444
No 118
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=86.18 E-value=2 Score=31.82 Aligned_cols=92 Identities=15% Similarity=0.139 Sum_probs=57.8
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEecccccccChh
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 172 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyLspr 172 (223)
.+||-+|..|..+...|.+.. +..|||.-+-- ++. ..+--+..+|+.-|+ ...+|++|+..-.+-..+++
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~-----~~~-~~~~~~~~~d~~~~~--~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRA-----LES-HRGGNLVRADLLCSI--NQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS--EEEEEESCHHH-----HHT-CSSSCEEECSTTTTB--CGGGCSEEEECCCCBTTCCC
T ss_pred CeEEEeccCccHHHHHHHhcC--cEEEEECCHHH-----Hhc-ccCCeEEECChhhhc--ccCCCCEEEECCCCccCCcc
Confidence 499999999998888888776 88888764311 111 223346678876644 45899999885444332222
Q ss_pred -------hhccccccchhhccCceEEEee
Q 027423 173 -------YLNKTLPDLARVASDGVLIFAG 194 (223)
Q Consensus 173 -------yLNkTLPeLaRvsadglViF~G 194 (223)
-.-..+.++.|...+|.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~lpgG~l~~~~ 123 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAVTVGMLYLLV 123 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHCCSSEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhCCCCEEEEEE
Confidence 1122344555544888888864
No 119
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=86.10 E-value=0.12 Score=42.16 Aligned_cols=114 Identities=19% Similarity=0.231 Sum_probs=64.2
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-------------c
Q 027423 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-------------I 140 (223)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-------------i 140 (223)
|.+..+|.+.. ..-.+||.+|-.+..+...+++....+..|||.-+ ++-+..+. .+ ..| -
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~-~~~l~~~~~~~~~~~v~ 137 (281)
T 1mjf_A 63 EPLVHPAMLAH---PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KI-DNGLLEAMLNGKHEKAK 137 (281)
T ss_dssp HHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CT-TTTHHHHHHTTCCSSEE
T ss_pred HHHHHHHHhhC---CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hh-ccccccccccCCCCcEE
Confidence 44444454431 23468999999999999999988556788887542 22233222 11 002 2
Q ss_pred eeeeeecCCCCCCCCCccEEEecccccccCh-hhh--ccccccchhh-ccCceEEEe-ecC
Q 027423 141 VRVADIKFPLPYRAKSFPLVIVSDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFA-GIS 196 (223)
Q Consensus 141 VRvADIkfpLPYR~kSFSlVIVSDaLDyLsp-ryL--NkTLPeLaRv-sadglViF~-G~P 196 (223)
+..+|..--++- ..+|++||+ |+-+...| ..| ...+-++.|+ ..+|++++. +.|
T Consensus 138 ~~~~D~~~~l~~-~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 138 LTIGDGFEFIKN-NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp EEESCHHHHHHH-CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEECchHHHhcc-cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 345665322333 678999885 77654433 221 2334454554 668888775 666
No 120
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=85.98 E-value=0.26 Score=41.30 Aligned_cols=116 Identities=19% Similarity=0.242 Sum_probs=63.8
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeeeee
Q 027423 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVADI 146 (223)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi------VRvADI 146 (223)
|.+..+|.+. . ..-++||.+|-.+..+...|++.. ..+.-+||.-+ ++-+..+.+.+ ..|+ +..+|.
T Consensus 83 e~l~~~~l~~--~-~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~-~~~~~~~rv~v~~~Da 158 (304)
T 2o07_A 83 EMIANLPLCS--H-PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGM-AIGYSSSKLTLHVGDG 158 (304)
T ss_dssp HHHHHHHHTT--S-SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGCTTEEEEESCH
T ss_pred HHHHHHHHhh--C-CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh-hcccCCCcEEEEECcH
Confidence 4555555432 1 234799999999999999998863 45677777532 22233333221 1122 456675
Q ss_pred cCCCCCCCCCccEEEecccccccChh---hhccccccchh-hccCceEEEe-ecC
Q 027423 147 KFPLPYRAKSFPLVIVSDALDYLSPK---YLNKTLPDLAR-VASDGVLIFA-GIS 196 (223)
Q Consensus 147 kfpLPYR~kSFSlVIVSDaLDyLspr---yLNkTLPeLaR-vsadglViF~-G~P 196 (223)
.--|+....+|++||+ |+-+...|. +....+.++.| +..+|++++. +.|
T Consensus 159 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 159 FEFMKQNQDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp HHHHHTCSSCEEEEEE-ECC-----------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHhhCCCCceEEEE-CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 4334445688999887 776654431 11223444444 4677888775 344
No 121
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=85.69 E-value=3.5 Score=34.45 Aligned_cols=108 Identities=14% Similarity=0.200 Sum_probs=71.6
Q ss_pred hhhHHHHHhc-cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhh-hhcc---ee--eeeecCCCC
Q 027423 80 AIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---VR--VADIKFPLP 151 (223)
Q Consensus 80 aiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLV-rKGi---VR--vADIkfpLP 151 (223)
.++.+-+.|. ..-.+||-||-.+-.....|++.- ..+..|++ ++++-...+... +.|+ |+ ..|+.-|+|
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p 266 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLE---RPPVAEEARELLTGRGLADRCEILPGDFFETIP 266 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEc---CHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC
Confidence 3566667775 346799999999988888887763 33455554 344333343322 2332 44 456654555
Q ss_pred CCCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 152 YR~kSFSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
- +|++|+.+++|.|.+....-+.|-++.|+= .+|.+++.
T Consensus 267 ~---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 267 D---GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp S---SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred C---CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3 899999999999999877667777777764 46766664
No 122
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=85.67 E-value=0.83 Score=38.07 Aligned_cols=104 Identities=12% Similarity=0.158 Sum_probs=69.1
Q ss_pred hhHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhc-ceeeeeecCCCCCCCCC
Q 027423 81 IPILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKS 156 (223)
Q Consensus 81 iP~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKG-iVRvADIkfpLPYR~kS 156 (223)
++.+-+.|. ..-.+||.||-.+-.....|++.- +.+..|++. +++-..++.+ .+ -+...|+.-|+| .
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~---~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL---PQVIENAPPL--SGIEHVGGDMFASVP---Q- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCC--TTEEEEECCTTTCCC---C-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh---HHHHHhhhhc--CCCEEEeCCcccCCC---C-
Confidence 355556664 345799999999999888888764 344454453 2332333322 22 133457644665 2
Q ss_pred ccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
|++|+.++.|.+++....-+.|-++.|+= .+|.+++.
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999999999998877778888888874 46777665
No 123
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=85.64 E-value=0.25 Score=34.98 Aligned_cols=103 Identities=14% Similarity=0.098 Sum_probs=62.2
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCC---CCCccEEEecccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYR---AKSFPLVIVSDAL 166 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR---~kSFSlVIVSDaL 166 (223)
-.+||.+|..+......|.+.... ..|||.-+ ++-+..+.+..--+--+..+|+.-.+|.- .++|++|+.....
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 358999999999888777776544 88888642 23344443322102234556665444432 2489998876543
Q ss_pred cccChhhhccccccch--h-hccCceEEEeecCcch
Q 027423 167 DYLSPKYLNKTLPDLA--R-VASDGVLIFAGISSMF 199 (223)
Q Consensus 167 DyLspryLNkTLPeLa--R-vsadglViF~G~P~q~ 199 (223)
. ..+.+.+..+. | +..+|+++++-.+.+.
T Consensus 121 ~----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 121 A----MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp T----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred c----hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 2 34455566665 4 5678888887655443
No 124
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=85.62 E-value=1.6 Score=36.51 Aligned_cols=95 Identities=15% Similarity=0.201 Sum_probs=62.2
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---ee--eeeec-CCCCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---VR--VADIK-FPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---VR--vADIk-fpLPYR~kSFSlVIVSDa 165 (223)
.+||-||-.|-.+...+.+....+..|||+-++ + ..++..++ .|+ |+ .+|+. +++| .+|++||....
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~--~-~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---~~~D~Ivs~~~ 125 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 125 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEEECCC
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHH--H-HHHHHHHHHcCCCCcEEEEEcchhhCCCC---CceeEEEEeCc
Confidence 589999999988887777776679999999753 3 34444443 243 33 45543 2444 57999988777
Q ss_pred ccccChhhhccccccchhh-ccCceEEEe
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
+.++....+-.++-++.|+ ..+|++|+.
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7777654444455455554 567777754
No 125
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=85.29 E-value=0.29 Score=41.26 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=66.7
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhcc------eeeeee
Q 027423 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGI------VRVADI 146 (223)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKGi------VRvADI 146 (223)
|.+..+|.+.. ..-.+||.+|-.+..+...+++. ...+.-+||.-+ ++-+..+.+.+ ..|+ +..+|.
T Consensus 104 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~-~~~~~~~~v~~~~~D~ 179 (321)
T 2pt6_A 104 EMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI-SCGYEDKRVNVFIEDA 179 (321)
T ss_dssp HHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-SGGGGSTTEEEEESCH
T ss_pred HHHHHHHHhcC---CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEEccH
Confidence 45555555432 23478999999999999999887 345677776532 23333333322 1122 445665
Q ss_pred cCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-ecC
Q 027423 147 KFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GIS 196 (223)
Q Consensus 147 kfpLPYR~kSFSlVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~P 196 (223)
.-.++....+|++||+ |..|...|. .| ...+.++.| +..+|++++. +.|
T Consensus 180 ~~~l~~~~~~fDvIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 180 SKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp HHHHHHCCSCEEEEEE-ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHhhcCCCceEEEE-CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 4334444678998875 665544332 12 233445554 4678888875 444
No 126
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=85.05 E-value=0.5 Score=33.64 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=60.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.-.+||.+|..+-.....+.+.. .+..|+|+.+ ++-+..+++..-- +--+..+|+.-++|.- .+|++|+.+..+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 34589999999977777776665 7788887643 3444444443211 1123456665445542 489999988766
Q ss_pred cccChhhhccccccchhh-ccCceEEEeec
Q 027423 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~ 195 (223)
.. +.+.+-++.|+ ..+|.+++...
T Consensus 111 ~~-----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 111 GE-----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp TC-----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 43 35566666775 45667777643
No 127
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=84.76 E-value=1.4 Score=35.83 Aligned_cols=99 Identities=11% Similarity=0.241 Sum_probs=67.7
Q ss_pred cceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh-hcc---ee--eeeecCCCCCCCCCccEEEecc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KGI---VR--VADIKFPLPYRAKSFPLVIVSD 164 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr-KGi---VR--vADIkfpLPYR~kSFSlVIVSD 164 (223)
-.+||.||-.+-.....|++.- ..+..|++. +++-..++...+ .|+ |+ ..|+.-+.++-+++|++|+.++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL---PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC---HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 5799999999999888888753 456667644 333333433322 232 33 3455433323457799999999
Q ss_pred cccccChhhhccccccchhhc-cCceEEEe
Q 027423 165 ALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 165 aLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
.|.++++....+.|-++.|+= .+|.+++.
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999988888999888864 46766664
No 128
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=84.75 E-value=0.36 Score=40.27 Aligned_cols=117 Identities=19% Similarity=0.233 Sum_probs=68.6
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh---hc-------ceee
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KG-------IVRV 143 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr---KG-------iVRv 143 (223)
.|.+..+|.+.. ..-.+||.+|-.++.+...+++.. ..+.-|||.-+ ++-..|+.-.. .| -+.+
T Consensus 64 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~~~~~~~~v~~~~ 138 (314)
T 1uir_A 64 HETLVHPAMLTH---PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDG--ELVEVAKRHMPEWHQGAFDDPRAVLVI 138 (314)
T ss_dssp HHHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCH--HHHHHHHHHCHHHHTTGGGCTTEEEEE
T ss_pred HHHHHHHHHhcC---CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHhHhhccccccCCceEEEE
Confidence 355555555432 234799999999999999999863 45677777543 12223332221 12 2456
Q ss_pred eeecCCCCCCCCCccEEEeccccccc---Ch-hh--hccccccchh-hccCceEEEe-ecCc
Q 027423 144 ADIKFPLPYRAKSFPLVIVSDALDYL---SP-KY--LNKTLPDLAR-VASDGVLIFA-GISS 197 (223)
Q Consensus 144 ADIkfpLPYR~kSFSlVIVSDaLDyL---sp-ry--LNkTLPeLaR-vsadglViF~-G~P~ 197 (223)
+|+.--++....+|++||+ |..+.. .| .. ....+-++.| +..+|++++. |.|.
T Consensus 139 ~D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 199 (314)
T 1uir_A 139 DDARAYLERTEERYDVVII-DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMIL 199 (314)
T ss_dssp SCHHHHHHHCCCCEEEEEE-ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEEC
T ss_pred chHHHHHHhcCCCccEEEE-CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 7765445555788999887 666554 22 11 1233444454 4667887776 5554
No 129
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=84.50 E-value=2.1 Score=34.86 Aligned_cols=100 Identities=15% Similarity=0.271 Sum_probs=64.1
Q ss_pred ccceeeeecCCc---chhhhhcccc--ccccccccccccccchhHHHHhhhh-hcc--eeeeeecCC------------C
Q 027423 91 SMHKVLHVGPDT---CSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVH-KGI--VRVADIKFP------------L 150 (223)
Q Consensus 91 sM~kVLHVGPdt---C~VVs~LLkE--eetEAWGVEPydiedad~~CKsLVr-KGi--VRvADIkfp------------L 150 (223)
...+||.+|-.+ -.+ ..++.+ .+.+..||+.- ++.-..++.+.. .+- +..+|+.-+ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~-~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNT-HEVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCH-HHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChH-HHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 347999998777 544 344433 24677787753 222233333332 232 345666321 3
Q ss_pred CCCCCCccEEEecccccccChhhhccccccchh-hccCceEEEeec
Q 027423 151 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGI 195 (223)
Q Consensus 151 PYR~kSFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G~ 195 (223)
|+ .+|.+|+...+|-|+++.-..+.|-+++| +...|.++|+-.
T Consensus 154 d~--~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CT--TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CC--CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 33 38999999999999998777889999999 456777777743
No 130
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=84.43 E-value=1.8 Score=34.26 Aligned_cols=92 Identities=9% Similarity=0.055 Sum_probs=59.3
Q ss_pred ceeeeecCCcchhhhhcccc-----cccccccccccc--ccchhHHHHhhhhhcceeeeeecCC--CCCCC-CCccEEEe
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-----EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP--LPYRA-KSFPLVIV 162 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-----eetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfp--LPYR~-kSFSlVIV 162 (223)
.+||-||-.|-.....|.+. ...+..|||..+ ++-+. .+-.+=-+..+|+.-. ||+-. .+|.+|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999988777666654 467899999765 23332 2211222456787654 56543 37999876
Q ss_pred cccccccChhhhccccccchh--hccCceEEEe
Q 027423 163 SDALDYLSPKYLNKTLPDLAR--VASDGVLIFA 193 (223)
Q Consensus 163 SDaLDyLspryLNkTLPeLaR--vsadglViF~ 193 (223)
..+ +. .+-+.|-++.| +...|++++.
T Consensus 159 d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 159 DNA--HA---NTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp ESS--CS---SHHHHHHHHHHHTCCTTCEEEEC
T ss_pred CCc--hH---hHHHHHHHHHHhhCCCCCEEEEE
Confidence 443 21 22346777775 7788999985
No 131
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=83.68 E-value=1.1 Score=33.74 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=58.9
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhh------hhhcceeeeeecCCCCCCCCCccEEE
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSL------VHKGIVRVADIKFPLPYRAKSFPLVI 161 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsL------VrKGiVRvADIkfpLPYR~kSFSlVI 161 (223)
-.+||.+|-.+-.....|.+.- ..+..|+|+.+ ++-+..+++.. ..+=-+..+|+.-. +....+|++|+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~ 156 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAIH 156 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEEE
Confidence 3589999999877776666542 25788888653 44455555542 11112445676533 22356799999
Q ss_pred ecccccccChhhhccccccchh-hccCceEEEeecC
Q 027423 162 VSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGIS 196 (223)
Q Consensus 162 VSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 196 (223)
+...+..+ +.++.| +..+|.++++-.|
T Consensus 157 ~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 157 VGAAAPVV--------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp ECSBBSSC--------CHHHHHTEEEEEEEEEEESC
T ss_pred ECCchHHH--------HHHHHHhcCCCcEEEEEEec
Confidence 88777443 234444 4567888887433
No 132
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=83.17 E-value=1 Score=38.31 Aligned_cols=94 Identities=18% Similarity=0.327 Sum_probs=59.7
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhh-c-----ceeeeeec-CCCCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIK-FPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrK-G-----iVRvADIk-fpLPYR~kSFSlVIVSDa 165 (223)
.+||-||-.|-.....+.+....+..|||+.++- ..++..+++ | -+..+|+. +++| .+|++||. +.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~---~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~Iv~-~~ 137 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMA---DHARALVKANNLDHIVEVIEGSVEDISLP---EKVDVIIS-EW 137 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTH---HHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEEEEE-CC
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHH---HHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceEEEE-cC
Confidence 6899999999888777777766689999987432 333433332 2 23445653 3455 78999886 55
Q ss_pred ccc-cCh-hhhccccccchh-hccCceEEEe
Q 027423 166 LDY-LSP-KYLNKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 166 LDy-Lsp-ryLNkTLPeLaR-vsadglViF~ 193 (223)
+.| +.+ ..+.+.+-++.| +..+|++|+.
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 444 332 345556666644 4567777665
No 133
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=82.78 E-value=0.85 Score=35.46 Aligned_cols=106 Identities=13% Similarity=0.075 Sum_probs=62.0
Q ss_pred ccceeeeecCCcchhhhhcccc---cccccccccc--ccccchhHHHHhh------------------------------
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEP--YDIEDADARCKSL------------------------------ 135 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE---eetEAWGVEP--ydiedad~~CKsL------------------------------ 135 (223)
.-.+||.+|=.|-.+.-.|.+. ...+..|||. --++-|..+.+..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3468999999888777666654 3567888864 3344455444433
Q ss_pred ---hhhcc----------eeeeeecCCCCC----CCCCccEEEecccccccCh-------hhhccccccchh-hccCceE
Q 027423 136 ---VHKGI----------VRVADIKFPLPY----RAKSFPLVIVSDALDYLSP-------KYLNKTLPDLAR-VASDGVL 190 (223)
Q Consensus 136 ---VrKGi----------VRvADIkfpLPY----R~kSFSlVIVSDaLDyLsp-------ryLNkTLPeLaR-vsadglV 190 (223)
|+.++ +..+|+.-+++. ..++|++|+..-..-+... ..+.+.+.++.| +..+|.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22111 566787655542 3458998876433322221 222344555555 4678999
Q ss_pred EEeecC
Q 027423 191 IFAGIS 196 (223)
Q Consensus 191 iF~G~P 196 (223)
++++..
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 987654
No 134
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=82.65 E-value=2.4 Score=31.52 Aligned_cols=100 Identities=14% Similarity=0.114 Sum_probs=62.1
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.-.+||-+|..+-.+...|.+.. ..+..|||+.+ ++-+..+++..- .+=-+..+|+.-.++.- .+|++|+....+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSG 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCC
Confidence 34689999999987777777664 46788887643 344444444321 11123446664444433 679999887765
Q ss_pred cccChhhhccccccchhh-ccCceEEEeecC
Q 027423 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAGIS 196 (223)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G~P 196 (223)
. .+.+.+.++.|+ ..+|.+++....
T Consensus 119 ~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 119 G-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp T-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred c-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4 444666777764 567888877543
No 135
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=82.24 E-value=0.77 Score=38.15 Aligned_cols=106 Identities=14% Similarity=0.137 Sum_probs=69.4
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc-------ceeeeee-------cCCCCCCCCC
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-------IVRVADI-------KFPLPYRAKS 156 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG-------iVRvADI-------kfpLPYR~kS 156 (223)
.+||-||=.|-....++++....+..||++-+ |+.|..+.+..-.+. -.+++|+ ..+-|+-..+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~ 129 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGK 129 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSC
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCC
Confidence 57999998887777778877667788887764 455555554331110 1346666 1222344679
Q ss_pred ccEEEeccccccc-Chhhhccccccchhhcc-CceEEEeecCcch
Q 027423 157 FPLVIVSDALDYL-SPKYLNKTLPDLARVAS-DGVLIFAGISSMF 199 (223)
Q Consensus 157 FSlVIVSDaLDyL-spryLNkTLPeLaRvsa-dglViF~G~P~q~ 199 (223)
|++|+...++-|+ .+.-..+.|-+++|+=. .|++|++ .|...
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~-~~~~~ 173 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT-TMDGD 173 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE-EECHH
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE-eCCHH
Confidence 9999999999886 44456789999999755 5566554 44433
No 136
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=82.17 E-value=0.84 Score=36.37 Aligned_cols=97 Identities=21% Similarity=0.278 Sum_probs=60.9
Q ss_pred ccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcc-e--eeeeecCCCCCCCCCccEEEeccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-V--RVADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGi-V--RvADIkfpLPYR~kSFSlVIVSDa 165 (223)
.-.+||-+|-.+-.....+.+... +..|||+-+ ++.+..|++ +.|+ + ..+|+.-++| ..+|++|+..-.
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~---~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~ 193 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAK---RNGVRPRFLEGSLEAALP--FGPFDLLVANLY 193 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHH---HTTCCCEEEESCHHHHGG--GCCEEEEEEECC
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHH---HcCCcEEEEECChhhcCc--CCCCCEEEECCc
Confidence 346899999999666555665544 888887533 444555444 2343 3 3345543343 568999986533
Q ss_pred ccccChhhhccccccchhh-ccCceEEEeecCcc
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGISSM 198 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~P~q 198 (223)
.+ .+.+.++++.|+ ..+|.++++|....
T Consensus 194 ~~-----~~~~~l~~~~~~LkpgG~lils~~~~~ 222 (254)
T 2nxc_A 194 AE-----LHAALAPRYREALVPGGRALLTGILKD 222 (254)
T ss_dssp HH-----HHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred HH-----HHHHHHHHHHHHcCCCCEEEEEeeccC
Confidence 32 356778888875 56788998875443
No 137
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=81.49 E-value=0.75 Score=34.74 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=59.2
Q ss_pred ceeeeecCCcchhhhhccccc------ccccccccccc--ccchhHHHHhhh------hhcceeeeeecCCCC---CCCC
Q 027423 93 HKVLHVGPDTCSVVSTLLKEE------ETEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLP---YRAK 155 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe------etEAWGVEPyd--iedad~~CKsLV------rKGiVRvADIkfpLP---YR~k 155 (223)
.+||.+|-.+......|.+.- +.+..|||+.+ ++-+..+++..- .+=-+..+|+.-.+| ....
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 589999999977666666543 35889998754 344555544331 111244566654331 3457
Q ss_pred CccEEEecccccccChhhhccccccchh-hccCceEEEeecC
Q 027423 156 SFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGIS 196 (223)
Q Consensus 156 SFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 196 (223)
+|++|++...+..+ +.++.+ +..+|.++++-.|
T Consensus 162 ~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 89999998887643 344444 4567777777433
No 138
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=80.65 E-value=1.5 Score=34.48 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=69.9
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc--ee--eeeecCCCC--CCC
Q 027423 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLP--YRA 154 (223)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi--VR--vADIkfpLP--YR~ 154 (223)
+.+.||..-..||-||-.+-.....|.+.. +....|||+.+ ++.+..+++ +.|+ |+ .+|+.-.|| +..
T Consensus 27 ~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~---~~~l~nv~~~~~Da~~~l~~~~~~ 103 (218)
T 3dxy_A 27 FPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH---EEGLSNLRVMCHDAVEVLHKMIPD 103 (218)
T ss_dssp HHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HTTCSSEEEECSCHHHHHHHHSCT
T ss_pred HHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH---HhCCCcEEEEECCHHHHHHHHcCC
Confidence 567788888899999999988887777654 56799999875 233444433 2343 44 356543333 567
Q ss_pred CCccEEEecccccccChhhhc------cccccchh-hccCceEEEeecCc
Q 027423 155 KSFPLVIVSDALDYLSPKYLN------KTLPDLAR-VASDGVLIFAGISS 197 (223)
Q Consensus 155 kSFSlVIVSDaLDyLspryLN------kTLPeLaR-vsadglViF~G~P~ 197 (223)
.||+.|++.=..-|-..+... ..+.+++| +...|.++|+-.+.
T Consensus 104 ~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp TCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 899999875111122222222 25667777 66788888876544
No 139
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=80.42 E-value=1.3 Score=34.58 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=57.3
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccccccc--cchhHHHHhhhhhcc-eeeeeecCC---CCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFP---LPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydi--edad~~CKsLVrKGi-VRvADIkfp---LPYR~kSFSlVIVSDa 165 (223)
.+||-+|-.|-.....|.+.- ..+.+|||+.+- ++.-..++.. .++ ..++|+.-+ +|.. .+|++|+. |.
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~-~~ 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQ-DI 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEE-CC
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEE-ec
Confidence 489999999887666555432 457899988752 3333444432 222 235687765 4443 78999875 43
Q ss_pred ccccChhhhccccccchhh-ccCceEEEe
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
..|......|.++.|+ ..+|.++++
T Consensus 135 ---~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 ---AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 2232222336778876 556777776
No 140
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=80.40 E-value=1.7 Score=36.56 Aligned_cols=100 Identities=20% Similarity=0.156 Sum_probs=60.9
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccc-hhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIED-ADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydied-ad~~CKsLVrKG--iVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.+||-||-.|-.....|.+....+..|||+-++-+ |..+++..--.+ -+..+|+.- +|+...+|++||......++
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCBBTB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEEccccccc
Confidence 58999999999887777777667999999985222 333333221112 234456532 23446889998865433333
Q ss_pred -Chhhhccccccchhh-ccCceEEEe
Q 027423 170 -SPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 170 -spryLNkTLPeLaRv-sadglViF~ 193 (223)
....+.+.|-++.|+ ..+|++|+.
T Consensus 147 ~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 147 FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 344555666666664 556777644
No 141
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=80.15 E-value=1.6 Score=34.41 Aligned_cols=113 Identities=15% Similarity=0.140 Sum_probs=63.2
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeeecC
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKF 148 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkf 148 (223)
.+..+.+-.|-+... -.+||-||-.+-.....|++. +..+..|||..+ ++-+..+++..--.. -+..+|+.-
T Consensus 49 ~~~~~~l~~l~~~~~--~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQ--AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcC--CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334444444433322 369999999998777666665 257888888643 444555554322111 245567644
Q ss_pred CCCCCC--CCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027423 149 PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (223)
Q Consensus 149 pLPYR~--kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (223)
.+|.-. .+|++|++ |+-.--.++||++.. ..+..+|++|+.
T Consensus 127 ~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpGG~lv~~ 169 (248)
T 3tfw_A 127 SLESLGECPAFDLIFI-DADKPNNPHYLRWAL---RYSRPGTLIIGD 169 (248)
T ss_dssp HHHTCCSCCCCSEEEE-CSCGGGHHHHHHHHH---HTCCTTCEEEEE
T ss_pred HHHhcCCCCCeEEEEE-CCchHHHHHHHHHHH---HhcCCCeEEEEe
Confidence 444433 48999986 442111234444433 234567888775
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=79.94 E-value=2.3 Score=32.62 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=60.1
Q ss_pred cceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCccEEEeccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~kSFSlVIVSDa 165 (223)
=.+||-+|-.+......|++. . ..+..|+|.-+ ++.+..+++..--.. -+..+|+.-+ ....+|++|+. |
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~-~- 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVIL-D- 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEE-C-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEE-C-
Confidence 358999999998888777766 3 67888887642 444555555432122 2445666644 44678999886 3
Q ss_pred ccccChhhhccccccchhh-ccCceEEEee
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G 194 (223)
+....+.+.++.|+ ..+|.+++..
T Consensus 170 -----~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 170 -----LPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred -----CCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 23335677777775 4566666553
No 143
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=79.67 E-value=1.4 Score=33.49 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=64.1
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||-+|-.+-.....|.+.. .+..|||..+ ++-+..+++..- .+--+..+|+.-.. ...+|++|+....+.+
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcCC
Confidence 589999999998888887764 7888888653 444555554332 12235567765433 3579999997766655
Q ss_pred cChhhhccccccchhh-ccCceEEEe
Q 027423 169 LSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~ 193 (223)
+.+..+.+.++.|+ ..+|++|+.
T Consensus 157 --~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 --PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp --GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred --cchhhhHHHHHHhhcCCcceeHHH
Confidence 45566688888886 556665544
No 144
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=79.53 E-value=1.2 Score=34.03 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=64.1
Q ss_pred cceeeeecCCcchhhhhcccc--ccccccccccccc--cchhHHHHhhhhhcceeeeeecCC--CCCCCCCccEEEeccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRAKSFPLVIVSDA 165 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPydi--edad~~CKsLVrKGiVRvADIkfp--LPYR~kSFSlVIVSDa 165 (223)
-.+||-+|-.|-.....|++. ...+..|||+.+- +++-.+++.. ..=-+..+|+.-+ +|.-..+|++|+. |.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~-~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA-DV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE-CC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE-cC
Confidence 358999999998888888776 3468899987642 5555555543 1112345777653 4555679999886 44
Q ss_pred ccccChhhhccccccchhh-ccCceEEEeecC
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGIS 196 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~P 196 (223)
. .|......+.++.|+ ..+|.++++=.|
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 3 444333346666654 567777776444
No 145
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=79.43 E-value=1.6 Score=33.97 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=57.7
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhh----hhhcceeeeeecCCCCCCCCCccEEEecc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL----VHKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsL----VrKGiVRvADIkfpLPYR~kSFSlVIVSD 164 (223)
.+||-+|-.+-.....|++. ...+..|+|.-+ ++.+..+++.. ...=-+..+|+.- +|+...+|++|+. |
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 178 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-SELPDGSVDRAVL-D 178 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG-CCCCTTCEEEEEE-E
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh-cCCCCCceeEEEE-C
Confidence 48999999988887777764 356788887532 34455554433 1111234466643 2445678999987 3
Q ss_pred cccccChhhhccccccchhh-ccCceEEEee
Q 027423 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (223)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~G 194 (223)
. ..| .+.|.++.|+ ..+|.+++..
T Consensus 179 ~---~~~---~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 179 M---LAP---WEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp S---SCG---GGGHHHHHHHEEEEEEEEEEE
T ss_pred C---cCH---HHHHHHHHHhCCCCCEEEEEe
Confidence 2 222 3667777775 4566666543
No 146
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=78.69 E-value=1.3 Score=33.65 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=57.0
Q ss_pred ccceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhh-h-hhcceeeeeecCCCCCCCCCccEEEecc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSL-V-HKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsL-V-rKGiVRvADIkfpLPYR~kSFSlVIVSD 164 (223)
.-.+||.+|-.+......|++. . ..+..|+|+-+ ++-+..+++.. = .+=-+..+|+.- +|+...+|++|+. |
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE-AELEEAAYDGVAL-D 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-CCCCTTCEEEEEE-E
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-cCCCCCCcCEEEE-C
Confidence 3458999999998877777766 2 56788887532 34444444322 0 111234456642 3555678999986 2
Q ss_pred cccccChhhhccccccchhhc-cCceEEEee
Q 027423 165 ALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 165 aLDyLspryLNkTLPeLaRvs-adglViF~G 194 (223)
+....+.|.++.|+- .+|.+++.-
T Consensus 174 ------~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 174 ------LMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ------SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ------CcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 223346677777754 456666554
No 147
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=78.00 E-value=2.8 Score=32.24 Aligned_cols=107 Identities=17% Similarity=0.251 Sum_probs=64.0
Q ss_pred HHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc--e--eeeeecCCCC--CCC
Q 027423 84 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLP--YRA 154 (223)
Q Consensus 84 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi--V--RvADIkfpLP--YR~ 154 (223)
++..||+.-.+||-||-.+-.....|.+.- +.+..|||..+ ++-+..+.+ +.|+ | ..+|+.- +| +..
T Consensus 31 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~---~~~~~nv~~~~~d~~~-l~~~~~~ 106 (213)
T 2fca_A 31 WNTVFGNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK---DSEAQNVKLLNIDADT-LTDVFEP 106 (213)
T ss_dssp HHHHHTSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HSCCSSEEEECCCGGG-HHHHCCT
T ss_pred HHHHcCCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH---HcCCCCEEEEeCCHHH-HHhhcCc
Confidence 445678777899999999988887777653 57888998764 233333332 2333 3 3356543 33 456
Q ss_pred CCccEEEecccccccChhh----h--ccccccchh-hccCceEEEee
Q 027423 155 KSFPLVIVSDALDYLSPKY----L--NKTLPDLAR-VASDGVLIFAG 194 (223)
Q Consensus 155 kSFSlVIVSDaLDyLspry----L--NkTLPeLaR-vsadglViF~G 194 (223)
.+|+.|++.-...+...+. + -+.|.+++| +..+|.++|+.
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 7899887532211221111 1 223556666 46778888874
No 148
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=77.63 E-value=2 Score=35.11 Aligned_cols=94 Identities=21% Similarity=0.168 Sum_probs=53.9
Q ss_pred ceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhh------------hhcceeeeeecCCC-CCCCC
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV------------HKGIVRVADIKFPL-PYRAK 155 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsLV------------rKGiVRvADIkfpL-PYR~k 155 (223)
.+||-+|-.+-.....|.+. . ..+..|||..+ ++-+..+.+.+- .+=-+..+|+.-.+ ++...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 48999999998777777765 2 27889988654 444555554321 11224456765433 45567
Q ss_pred CccEEEecccccccChhhhccccccchhhcc-CceEEEe
Q 027423 156 SFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 156 SFSlVIVSDaLDyLspryLNkTLPeLaRvsa-dglViF~ 193 (223)
+|++|+. |.. .|. ..++++.|+=. +|.+++.
T Consensus 187 ~fD~V~~-~~~---~~~---~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 187 TFDAVAL-DML---NPH---VTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp -EEEEEE-CSS---STT---TTHHHHGGGEEEEEEEEEE
T ss_pred CeeEEEE-CCC---CHH---HHHHHHHHhcCCCcEEEEE
Confidence 8999886 433 332 26777777654 4555543
No 149
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=77.44 E-value=1 Score=34.88 Aligned_cols=97 Identities=12% Similarity=0.189 Sum_probs=59.3
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCC-CCCCCccEEEeccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLP-YRAKSFPLVIVSDA 165 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLP-YR~kSFSlVIVSDa 165 (223)
-.+||-+|-.+-.....|.+. ...+..|||..+ ++-+..+++..-- +=-+..+|+.-.+| .-..+|++|++.-.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 368999999998877777763 267788888643 4445555543321 11355678765566 66789999985322
Q ss_pred ccccChhhhccccccchhhccCceEEE
Q 027423 166 LDYLSPKYLNKTLPDLARVASDGVLIF 192 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF 192 (223)
.. --++++++..+ .+..+|++|+
T Consensus 152 ~~-~~~~~l~~~~~---~LkpgG~lv~ 174 (232)
T 3ntv_A 152 KA-QSKKFFEIYTP---LLKHQGLVIT 174 (232)
T ss_dssp SS-SHHHHHHHHGG---GEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---hcCCCeEEEE
Confidence 11 12334443332 2456788877
No 150
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=77.24 E-value=3.7 Score=31.48 Aligned_cols=96 Identities=14% Similarity=0.044 Sum_probs=60.6
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
=.+||-+|..|-...-.|.+. ..+.+|||+-+ ++-+..+++.+--. =-+..+|+.-.++.- .+|++|+....+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~- 132 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG- 132 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC-
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc-
Confidence 358999999997776666666 77899998643 44455555443212 123456665444443 469999876644
Q ss_pred ccChhhhccccccchh-hccCceEEEeecC
Q 027423 168 YLSPKYLNKTLPDLAR-VASDGVLIFAGIS 196 (223)
Q Consensus 168 yLspryLNkTLPeLaR-vsadglViF~G~P 196 (223)
.++ .+.++.| +...|.+++....
T Consensus 133 --~~~----~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 133 --SQA----LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp --CHH----HHHHHHHHSCTTCEEEEEECS
T ss_pred --cHH----HHHHHHHhcCCCcEEEEEecC
Confidence 222 5666666 4667888887543
No 151
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=76.91 E-value=2.7 Score=33.26 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=45.9
Q ss_pred ccceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhh-hcceeeeeecCCCCCCCCCccEEEec
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVS 163 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVr-KGiVRvADIkfpLPYR~kSFSlVIVS 163 (223)
.-.+||-+|-.+..+...|.++ ...+.+|||..+ ++-+..|++.+-- +--+..+|+.-++| ..+|++|+..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~n 183 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSN 183 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEEC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEEC
Confidence 3458999999998887777755 356888888653 4445555554311 11234456655554 5789998874
No 152
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=76.60 E-value=6.5 Score=29.63 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=56.7
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEeccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 167 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaLD 167 (223)
-.+||-+|-.+......|++. ..+..|+|+.+ ++-+..+.+..- .+--+..+|+.-++ ....+|++|+. |
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~-~--- 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFV-D--- 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEE-C---
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEE-C---
Confidence 358999999988777777776 67788887643 333444443221 11123345665433 13568999986 2
Q ss_pred ccChhhhccccccchhh-ccCceEEEeec
Q 027423 168 YLSPKYLNKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 168 yLspryLNkTLPeLaRv-sadglViF~G~ 195 (223)
+....+.+.++.|+ ..+|.+++.-.
T Consensus 166 ---~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 166 ---VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ---SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 22334566677764 55676666543
No 153
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=76.52 E-value=1.5 Score=37.17 Aligned_cols=116 Identities=20% Similarity=0.213 Sum_probs=64.5
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhh---c------ceeee
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---G------IVRVA 144 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrK---G------iVRvA 144 (223)
.|.+..+|.+.. ..-++||.+|-.+..+...|++.. ..+..+||.-+ ++-..|+.-..+ | -+..+
T Consensus 95 ~e~l~~l~l~~~---~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~Ar~~~~~~~~~~~~~rv~~~~~ 169 (314)
T 2b2c_A 95 QEMLAHLPMFAH---PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE--MVIDVAKKFLPGMSCGFSHPKLDLFCG 169 (314)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH--HHHHHHHHHCTTTSGGGGCTTEEEECS
T ss_pred HHHHHHHHHhhC---CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHhccccCCCCEEEEEC
Confidence 455555665432 234799999999999999998863 45677776532 122233332221 2 24556
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe-ecC
Q 027423 145 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GIS 196 (223)
Q Consensus 145 DIkfpLPYR~kSFSlVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~P 196 (223)
|..-.|+....+|++||+ |+.|...|. .| ...+-++.| +..+|++++. |.|
T Consensus 170 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 170 DGFEFLKNHKNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp CHHHHHHHCTTCEEEEEE-CCC-------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred hHHHHHHhcCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 764334445678998885 777665442 12 344445554 4567877775 555
No 154
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=76.32 E-value=3.8 Score=34.33 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=57.5
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc-----eeeeeecCCCCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi-----VRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.+||-||-.|..+...+.+....+..|||+-++ -..++..++ .|+ +..+|+. .+|+...+|++||.....
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~---~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEI---LYQAMDIIRLNKLEDTITLIKGKIE-EVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTH---HHHHHHHHHHTTCTTTEEEEESCTT-TSCCSCSCEEEEEECCCB
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHH---HHHHHHHHHHcCCCCcEEEEEeeHH-HhcCCCCcEEEEEEcCch
Confidence 589999999988777777766568999998753 233333332 232 3445653 234446789998865421
Q ss_pred ccc-Chhhhccccccchhh-ccCceEE
Q 027423 167 DYL-SPKYLNKTLPDLARV-ASDGVLI 191 (223)
Q Consensus 167 DyL-spryLNkTLPeLaRv-sadglVi 191 (223)
..+ ....+.+.|-++.|+ ..+|++|
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 112 123344555555564 4567766
No 155
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=76.02 E-value=0.42 Score=34.44 Aligned_cols=103 Identities=12% Similarity=0.096 Sum_probs=61.8
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeecCC---CCCCCCCccEEEecc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFP---LPYRAKSFPLVIVSD 164 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfp---LPYR~kSFSlVIVSD 164 (223)
-.+||-+|-.+......+++....+..|||..+ ++.+..+++..- .+--+..+|+.-. +|....+|++|+...
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 358999999999887778876667899998653 444555554331 1223455676433 233467899888644
Q ss_pred cccccChhhhccccccc--hh-hccCceEEEeecCc
Q 027423 165 ALDYLSPKYLNKTLPDL--AR-VASDGVLIFAGISS 197 (223)
Q Consensus 165 aLDyLspryLNkTLPeL--aR-vsadglViF~G~P~ 197 (223)
. |. .....+.+-.+ .| +..+|++++.-.+.
T Consensus 125 ~--~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 125 P--YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp C--GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred C--CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 3 22 22233344444 33 46778887764333
No 156
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=75.44 E-value=1.5 Score=36.15 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=62.7
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcc-eeeeeecCCCCCCCCCccEEEecccccc
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGI-VRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGi-VRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
...+||.||..+-.....|++.- ..+..|++. .++-...+.+ .++ +...|+--|+| +|++|+.+..|.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~----~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ---PQVVGNLTGN--ENLNFVGGDMFKSIP----SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC---HHHHSSCCCC--SSEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc---HHHHhhcccC--CCcEEEeCccCCCCC----CceEEEEcccccC
Confidence 44789999999999888888764 334555543 2222222221 231 23456644665 4999999999999
Q ss_pred cChhhhccccccchhhcc----CceEEEe
Q 027423 169 LSPKYLNKTLPDLARVAS----DGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa----dglViF~ 193 (223)
++....-+.|-++.|+-. +|.+++.
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 988766678888888744 6866664
No 157
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=75.44 E-value=1.6 Score=33.11 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=59.0
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCC--CCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY--RAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPY--R~kSFSlVIVSDaL 166 (223)
.+||-+|..+......|.+. ...+..|||+-+ ++++..+++.. .+=-+..+|+.-+..+ -..+|++|+ +|..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~-~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIF-EDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEE-ECCC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEE-ECCC
Confidence 48999999998777777655 246788887654 34555555544 2222445777654322 235899988 4543
Q ss_pred cccChhhhccccccchhh-ccCceEEEe
Q 027423 167 DYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
.|......+.++.|+ ..+|.++++
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 443333336777765 456777776
No 158
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=74.81 E-value=0.64 Score=37.35 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=54.7
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhc--cee---eeeecCCCCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG--IVR---VADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKG--iVR---vADIkfpLPYR~kSFSlVIVSDa 165 (223)
.+||-+|-.|-.....|++....+..||++-+ ++-+-.+.......+ -++ .+|+..++ +...+|++|+.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~D~v~~~-- 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR-PSFTSIDVSFIS-- 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC-CSEEEECCSSSC--
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC-CCEEEEEEEhhh--
Confidence 58999999999988888888656899998753 333333322211111 111 13333322 233344444332
Q ss_pred ccccChhhhccccccchhhc-cCceEEEeecC
Q 027423 166 LDYLSPKYLNKTLPDLARVA-SDGVLIFAGIS 196 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRvs-adglViF~G~P 196 (223)
+.+.|+++.|+- .+|.+++.-.|
T Consensus 116 --------l~~~l~~i~rvLkpgG~lv~~~~p 139 (232)
T 3opn_A 116 --------LDLILPPLYEILEKNGEVAALIKP 139 (232)
T ss_dssp --------GGGTHHHHHHHSCTTCEEEEEECH
T ss_pred --------HHHHHHHHHHhccCCCEEEEEECc
Confidence 378999999985 46777775433
No 159
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=74.74 E-value=2.1 Score=32.60 Aligned_cols=106 Identities=10% Similarity=-0.006 Sum_probs=61.5
Q ss_pred cceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCCCC-----CCccEE
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRA-----KSFPLV 160 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPYR~-----kSFSlV 160 (223)
-++||-+|-.+-...-.|.+. ...+.+|||..+ ++-+..+++..--.. -+..+|..-.+|.-. .+|++|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 368999999887776666653 367889998754 455555555432111 245567633344433 689999
Q ss_pred EecccccccChhhhccccccchhhccCceEEEe--ecCcch
Q 027423 161 IVSDALDYLSPKYLNKTLPDLARVASDGVLIFA--GISSMF 199 (223)
Q Consensus 161 IVSDaLDyLspryLNkTLPeLaRvsadglViF~--G~P~q~ 199 (223)
++.-......+ ++ +.+-.+..+..+|++++. -.|+..
T Consensus 139 ~~d~~~~~~~~-~~-~~~~~~~~LkpgG~lv~~~~~~~~~~ 177 (221)
T 3u81_A 139 FLDHWKDRYLP-DT-LLLEKCGLLRKGTVLLADNVIVPGTP 177 (221)
T ss_dssp EECSCGGGHHH-HH-HHHHHTTCCCTTCEEEESCCCCCCCH
T ss_pred EEcCCcccchH-HH-HHHHhccccCCCeEEEEeCCCCcchH
Confidence 86543433211 11 222233456778888886 344443
No 160
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=74.38 E-value=3 Score=30.88 Aligned_cols=90 Identities=14% Similarity=0.030 Sum_probs=51.4
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEeccccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVSDaLDyL 169 (223)
-.+||-+|..+......|.+....+..|||.- -++.+..+++..--+--+..+|+.- +| .+|++||..-.....
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cC---CCCCEEEEcCCCccc
Confidence 35899999999988777777655578888864 2333444443221012244566643 33 489998865443333
Q ss_pred Chhhhccccccchhhc
Q 027423 170 SPKYLNKTLPDLARVA 185 (223)
Q Consensus 170 spryLNkTLPeLaRvs 185 (223)
+..-..+.|-++.|+.
T Consensus 126 ~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS 141 (207)
T ss_dssp STTTTHHHHHHHHHHC
T ss_pred cCCchHHHHHHHHHhc
Confidence 3222223344556665
No 161
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=73.12 E-value=2.8 Score=35.40 Aligned_cols=95 Identities=12% Similarity=0.088 Sum_probs=57.6
Q ss_pred cceeeeecCCcchhhhhcccccc-cccccccc--ccccchhHHHHhhhhhcc----eeeeeecCCCCC-CCCCccEEEec
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEP--YDIEDADARCKSLVHKGI----VRVADIKFPLPY-RAKSFPLVIVS 163 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEee-tEAWGVEP--ydiedad~~CKsLVrKGi----VRvADIkfpLPY-R~kSFSlVIVS 163 (223)
-.+||-+| .|..+.-.|.+... .++.|||. --++-+..|++.+ |+ +..+|+.-+||- -..+|++||+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~---g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI---GYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH---TCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 46899999 98877666655543 67888874 3345566665533 43 456788777875 35689998864
Q ss_pred ccccccChhhhccccccchhhccC-c-eEEEe
Q 027423 164 DALDYLSPKYLNKTLPDLARVASD-G-VLIFA 193 (223)
Q Consensus 164 DaLDyLspryLNkTLPeLaRvsad-g-lViF~ 193 (223)
-.. .+.-+.+-|.+..|+-.. | +++|+
T Consensus 249 ~p~---~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 249 PPE---TLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CCS---SHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCC---chHHHHHHHHHHHHHcccCCeEEEEE
Confidence 211 111123445556665544 7 44555
No 162
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=73.09 E-value=2.3 Score=38.43 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=63.6
Q ss_pred ccceeeeecCCcchhhhhccccc-cccccccccccc--cch-------hHHHHhhhhh-cceee--e-eecCCCCC--CC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDA-------DARCKSLVHK-GIVRV--A-DIKFPLPY--RA 154 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydi--eda-------d~~CKsLVrK-GiVRv--A-DIkfpLPY--R~ 154 (223)
.=.+||-+|-.+-.+...|.+.- ..+++|||..+- +-| ..+|+.+--+ +-|++ + |..-+.|+ -.
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 34689999999999888887753 357999997652 333 5555543110 23443 3 33222232 13
Q ss_pred CCccEEEecccccccChhhhccccccchhhccCc-eEEEe
Q 027423 155 KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDG-VLIFA 193 (223)
Q Consensus 155 kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadg-lViF~ 193 (223)
.+|++|++++++ + . .-+++.|-++.|+-..| .+++.
T Consensus 322 ~~FDvIvvn~~l-~-~-~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 322 PQCDVILVNNFL-F-D-EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGCSEEEECCTT-C-C-HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCCCEEEEeCcc-c-c-ccHHHHHHHHHHhCCCCeEEEEe
Confidence 689999988776 2 2 46778888999987754 55554
No 163
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=72.93 E-value=1.4 Score=33.10 Aligned_cols=120 Identities=13% Similarity=0.069 Sum_probs=66.9
Q ss_pred chHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeee
Q 027423 73 CTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADI 146 (223)
Q Consensus 73 Ct~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADI 146 (223)
...+..+.+-.+.+... -.+||-+|..+-.....|++. +..+..|||..+ ++-+..+++..--.. -+..+|+
T Consensus 48 ~~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQ--AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp CCHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cCHHHHHHHHHHHHhhC--CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 34444444444444332 358999999998877777664 367888888653 444555554332111 2445676
Q ss_pred cCCCCCCC-----CCccEEEecccccccChhhhccccccchh-hccCceEEEe--ecCcch
Q 027423 147 KFPLPYRA-----KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA--GISSMF 199 (223)
Q Consensus 147 kfpLPYR~-----kSFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~--G~P~q~ 199 (223)
.-.+|.-. .+|++|++ |+- .....+.+.++.| +...|++++. -++|..
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~-~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~ 181 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYI-DAD----KANTDLYYEESLKLLREGGLIAVDNVLRRGQV 181 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEE-CSC----GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGG
T ss_pred HHHHHHhhhccCCCCccEEEE-CCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcc
Confidence 43343322 78999984 332 2222233444444 4567888773 455554
No 164
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=72.45 E-value=1.9 Score=31.37 Aligned_cols=53 Identities=25% Similarity=0.365 Sum_probs=40.1
Q ss_pred cceeeeeecCCCCC---CCCCccEEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 139 GIVRVADIKFPLPY---RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 139 GiVRvADIkfpLPY---R~kSFSlVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
--+..+|+. .+|+ ...+|++|+.+.+|.|+.+ .+.+.|.++.|+= .+|.+++.
T Consensus 44 ~~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 44 GRVSVENIK-QLLQSAHKESSFDIILSGLVPGSTTL-HSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp SEEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEechh-cCccccCCCCCEeEEEECChhhhccc-CHHHHHHHHHHHCCCCEEEEEE
Confidence 345678886 3444 7899999999999999933 3578899999975 56777774
No 165
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=71.70 E-value=7.6 Score=32.18 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=54.5
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---e--eeeeecCCCCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---V--RvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.+||-||-.|......+.+....+..|||+-++ + ..++..++ .|+ | ..+|+. .+|....+|++||..-..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~--~-~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSI--I-EMAKELVELNGFSDKITLLRGKLE-DVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTH--H-HHHHHHHHHTTCTTTEEEEESCTT-TSCCSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHH--H-HHHHHHHHHcCCCCCEEEEECchh-hccCCCCcccEEEEeCch
Confidence 589999999988777777665668999998643 2 23333333 232 3 345553 123335789988864322
Q ss_pred cccC-hhhhccccccchhh-ccCceEE
Q 027423 167 DYLS-PKYLNKTLPDLARV-ASDGVLI 191 (223)
Q Consensus 167 DyLs-pryLNkTLPeLaRv-sadglVi 191 (223)
..+. ..-+.+.|-++.|+ ..+|++|
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2331 22233344444454 4567766
No 166
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=71.05 E-value=7.6 Score=30.36 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=61.9
Q ss_pred cccceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhhhcc--eee--eee-cCCCCCCCCCccEEEecc
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI--VRV--ADI-KFPLPYRAKSFPLVIVSD 164 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVrKGi--VRv--ADI-kfpLPYR~kSFSlVIVSD 164 (223)
..=.+||-||-.+-.....+.+....+.+|||+.+ +.-..++...++.- +++ .|. ....+.-..+|..|+. |
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~--~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~-D 135 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY-D 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE-C
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCH--HHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE-e
Confidence 34468999999998877777776667899999873 44444444443322 332 232 1234555788998863 4
Q ss_pred ccc-cc---Chhhhccccccchhhc-cCceEEEee
Q 027423 165 ALD-YL---SPKYLNKTLPDLARVA-SDGVLIFAG 194 (223)
Q Consensus 165 aLD-yL---spryLNkTLPeLaRvs-adglViF~G 194 (223)
+.- .. .-.+..+.+-|++||= ..|+.+|..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 321 11 1123456677888864 567777764
No 167
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=70.74 E-value=3.5 Score=35.83 Aligned_cols=99 Identities=11% Similarity=0.165 Sum_probs=67.8
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeeecCC---CCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADIkfp---LPYR~kSFSlVIVSDaL 166 (223)
.+||-+|-.+-.+--.|.+. ..+..|||..+ ++.|..|.+..- .+=-+..+|+.-. +|+...+|++|++
T Consensus 288 ~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~---- 362 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL---- 362 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE----
T ss_pred CEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE----
Confidence 58999999988877766665 67889998654 566766665321 1112455676544 4566778998875
Q ss_pred cccChhh--hccccccchhhccCceEEEeecCcch
Q 027423 167 DYLSPKY--LNKTLPDLARVASDGVLIFAGISSMF 199 (223)
Q Consensus 167 DyLspry--LNkTLPeLaRvsadglViF~G~P~q~ 199 (223)
+|-| +...+..|++...+++|.++-+|...
T Consensus 363 ---dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~tl 394 (433)
T 1uwv_A 363 ---DPARAGAAGVMQQIIKLEPIRIVYVSCNPATL 394 (433)
T ss_dssp ---CCCTTCCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred ---CCCCccHHHHHHHHHhcCCCeEEEEECChHHH
Confidence 3444 44556677777889999999888765
No 168
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=70.43 E-value=4 Score=30.67 Aligned_cols=74 Identities=11% Similarity=-0.018 Sum_probs=46.1
Q ss_pred cccceeeeecCC-cchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCCCCccEEEec
Q 027423 90 DSMHKVLHVGPD-TCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS 163 (223)
Q Consensus 90 dsM~kVLHVGPd-tC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~kSFSlVIVS 163 (223)
..-.+||-+|-. +......|.+....+..|||.-+ ++-+..+++..--+=-+..+|+....++...+|++|+..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 345789999999 66655555544367788888643 344555544321122355677654556667899999853
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=68.09 E-value=9.2 Score=30.13 Aligned_cols=93 Identities=11% Similarity=0.141 Sum_probs=56.1
Q ss_pred ceeeeecCCcchhhhhcccc-c-ccccccccccc--ccchhHHHHhhh--hhcceeeeeecCCCCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-e-etEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
.+||-+|-.+......|++. . ..+..|+|..+ ++-+..+.+..- .+=-+..+|+.-.+ ...+|++|+. |
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~V~~-~-- 188 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--DEKDVDALFL-D-- 188 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--SCCSEEEEEE-C--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--cCCccCEEEE-C--
Confidence 48999999997777777765 3 56788887543 344444443321 11123456665443 3468999886 3
Q ss_pred cccChhhhccccccchhh-ccCceEEEee
Q 027423 167 DYLSPKYLNKTLPDLARV-ASDGVLIFAG 194 (223)
Q Consensus 167 DyLspryLNkTLPeLaRv-sadglViF~G 194 (223)
|.+..+.|.++.|+ ..+|.+++.-
T Consensus 189 ----~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 189 ----VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ----CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 33445677777775 4556666553
No 170
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=65.60 E-value=4.9 Score=31.25 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=52.0
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhh-----cc----eeeeeecCCCC--CCCCC
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-----GI----VRVADIKFPLP--YRAKS 156 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrK-----Gi----VRvADIkfpLP--YR~kS 156 (223)
.-.+||-||-.+......|.+.. +.+..|||..+ ++-+..+++.+-+. |+ +..+|+.-.|| +...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 45689999999999988888765 56899999764 45566666654211 32 44578765577 77889
Q ss_pred ccEEEec
Q 027423 157 FPLVIVS 163 (223)
Q Consensus 157 FSlVIVS 163 (223)
|+.|++.
T Consensus 129 ~d~v~~~ 135 (246)
T 2vdv_E 129 LSKMFFC 135 (246)
T ss_dssp EEEEEEE
T ss_pred cCEEEEE
Confidence 9999854
No 171
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=63.29 E-value=8.2 Score=31.53 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=58.7
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEecccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
-.+||.+|-.+-.....|.+.. ..+..|||+-+ ++.+..+++..--.. -+..+|+.-.+| ...+|++|++...+
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVGV 154 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSBB
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCCH
Confidence 3589999999866665555443 23488888643 333444443221111 234566654444 45789999999999
Q ss_pred cccChhhhccccccch-hhccCceEEEeecCc
Q 027423 167 DYLSPKYLNKTLPDLA-RVASDGVLIFAGISS 197 (223)
Q Consensus 167 DyLspryLNkTLPeLa-RvsadglViF~G~P~ 197 (223)
.++.. ++. .+..+|++++.-.|.
T Consensus 155 ~~~~~--------~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 155 DEVPE--------TWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SCCCH--------HHHHHEEEEEEEEEEBCBG
T ss_pred HHHHH--------HHHHhcCCCcEEEEEECCC
Confidence 88762 232 345678888774444
No 172
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=62.66 E-value=7.2 Score=33.55 Aligned_cols=103 Identities=11% Similarity=0.123 Sum_probs=64.3
Q ss_pred ceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh--hhcce--eeeeecCCCCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV--HKGIV--RVADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV--rKGiV--RvADIkfpLPYR~kSFSlVIVSDa 165 (223)
.+||-+|-.+..+-..+.+.. ..+..|||.-+ ++-+..|++..- .+.-| ..+|+--++ ...+|++||....
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--EPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--CTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--CCCCeeEEEECCC
Confidence 689999999999888888765 67889998753 333444444321 11124 567766544 4679999987654
Q ss_pred ccc---cChhhhccccccchh-hccCceEEEeecCc
Q 027423 166 LDY---LSPKYLNKTLPDLAR-VASDGVLIFAGISS 197 (223)
Q Consensus 166 LDy---LspryLNkTLPeLaR-vsadglViF~G~P~ 197 (223)
+.. +...-..+-+-++.| +..+|.+++.++..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 421 111112234566766 57889999987544
No 173
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=61.85 E-value=6.8 Score=32.75 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=61.3
Q ss_pred ceeeeecCCcchhhhhcccccccccccccc--ccccchhHHHHhhhh--hcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP--YDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEP--ydiedad~~CKsLVr--KGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||-+|-.|...--. .+ ...+++|||. --++.+..|++..-- +--+..+|+.-.+ .+|++||+ |
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~-d---- 265 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIM-N---- 265 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEE-C----
T ss_pred CEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEE-C----
Confidence 5899999999887666 66 5778889884 446667777664321 1224456765433 78998885 4
Q ss_pred cChhhhccccccchhh-ccCceEEEeec
Q 027423 169 LSPKYLNKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 169 LspryLNkTLPeLaRv-sadglViF~G~ 195 (223)
.|++..+.+.++.|+ ..+|++++..+
T Consensus 266 -pP~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 266 -LPKFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp -CTTTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -CcHhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 266666777777776 46787777644
No 174
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=60.71 E-value=6.5 Score=31.26 Aligned_cols=110 Identities=16% Similarity=0.145 Sum_probs=62.1
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeeee
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVAD 145 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvAD 145 (223)
.+..+.+-.|.+..+ -++||-||-.+-...-.|.+. ++.+..|||..+ ++-+..+++. .|+ ++.+|
T Consensus 65 ~~~~~ll~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~i~~~~gd 139 (247)
T 1sui_A 65 ADEGQFLSMLLKLIN--AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK---AGVDHKIDFREGP 139 (247)
T ss_dssp HHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH---TTCGGGEEEEESC
T ss_pred HHHHHHHHHHHHhhC--cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCCeEEEECC
Confidence 344444444444333 358999999988776666553 257888988754 2334444432 233 44556
Q ss_pred ecCCCCCC------CCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027423 146 IKFPLPYR------AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (223)
Q Consensus 146 IkfpLPYR------~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (223)
..--+|.- ..+|++|++ |+-.--.+.|+...++ .+...|++++.
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~d 189 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFV-DADKDNYLNYHKRLID---LVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEE-CSCSTTHHHHHHHHHH---HBCTTCCEEEE
T ss_pred HHHHHHHHHhccCCCCCEEEEEE-cCchHHHHHHHHHHHH---hCCCCeEEEEe
Confidence 54333421 478999876 4422122455554432 35678888874
No 175
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=59.63 E-value=4.5 Score=29.30 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=40.2
Q ss_pred cccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCC---CCCCccEEEe
Q 027423 90 DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY---RAKSFPLVIV 162 (223)
Q Consensus 90 dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPY---R~kSFSlVIV 162 (223)
..-.+||-+|-.|......|.+.. ..+..|||..+ ++-+..+++..-.+--+..+|+.-+++- ...+|++|+.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 344689999999998888887764 45788888643 4445555443211222445666554432 2389999987
No 176
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=57.97 E-value=16 Score=31.72 Aligned_cols=96 Identities=17% Similarity=0.221 Sum_probs=56.7
Q ss_pred ceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhhhhcc----eeeeeecCCCCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPy--diedad~~CKsLVrKGi----VRvADIkfpLPYR~kSFSlVIVSDa 165 (223)
.+||-||=.+-..-+-++.+ -..+.-|||.- -++-|..+.+. .|+ +..+|.. .+| ..+|++|+++ +
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~---~gl~~v~~v~gDa~-~l~--d~~FDvV~~~-a 196 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG---LGVDGVNVITGDET-VID--GLEFDVLMVA-A 196 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH---HTCCSEEEEESCGG-GGG--GCCCSEEEEC-T
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh---cCCCCeEEEECchh-hCC--CCCcCEEEEC-C
Confidence 58999986553332233322 35667777643 23434444332 244 3345553 356 5799999975 3
Q ss_pred ccccChhhhccccccchhh-ccCceEEEeecCcch
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGISSMF 199 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF~G~P~q~ 199 (223)
+ . .-..+.+.++.|+ ...|.+++...++++
T Consensus 197 ~---~-~d~~~~l~el~r~LkPGG~Lvv~~~~~~r 227 (298)
T 3fpf_A 197 L---A-EPKRRVFRNIHRYVDTETRIIYRTYTGMR 227 (298)
T ss_dssp T---C-SCHHHHHHHHHHHCCTTCEEEEEECCGGG
T ss_pred C---c-cCHHHHHHHHHHHcCCCcEEEEEcCcchh
Confidence 3 2 2334688899986 567788887777765
No 177
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=57.00 E-value=6.7 Score=33.48 Aligned_cols=117 Identities=19% Similarity=0.188 Sum_probs=65.6
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhhhcc------eeeee
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI------VRVAD 145 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVrKGi------VRvAD 145 (223)
.|.+..+|.+.- ..-.+||.+|-.+..+...|++.. ..+..+||.-+ ++-+..+.+.+ ..|+ +..+|
T Consensus 107 ~e~L~~l~l~~~---~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~-~~gl~~~rv~~~~~D 182 (334)
T 1xj5_A 107 QEMITHLPLCSI---PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDV-AIGYEDPRVNLVIGD 182 (334)
T ss_dssp HHHHHHHHHTTS---SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGSTTEEEEESC
T ss_pred HHHHHHHHHhhC---CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEECC
Confidence 345555554421 233789999999999999999874 45777777543 22233333221 0122 45567
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhh---hccccccchh-hccCceEEEe-ecC
Q 027423 146 IKFPLP-YRAKSFPLVIVSDALDYLSPKY---LNKTLPDLAR-VASDGVLIFA-GIS 196 (223)
Q Consensus 146 IkfpLP-YR~kSFSlVIVSDaLDyLspry---LNkTLPeLaR-vsadglViF~-G~P 196 (223)
..-.++ ....+|++||+ |+.+...+.. ..+.+.++.| +..+|++++. +.|
T Consensus 183 ~~~~l~~~~~~~fDlIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 183 GVAFLKNAAEGSYDAVIV-DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp HHHHHHTSCTTCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred HHHHHHhccCCCccEEEE-CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 543232 23578998875 6554332211 1233444544 4577888885 444
No 178
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=56.82 E-value=7.8 Score=31.25 Aligned_cols=97 Identities=14% Similarity=0.030 Sum_probs=62.7
Q ss_pred ceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhh-hhcceeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPy--diedad~~CKsLV-rKGiVRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||-+|-.+...--.|.+. ...+.+|||.- -++.+..|++..- ..=.+..+|+.-. |. ..+|++||+.-
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~---- 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGY---- 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECC----
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECC----
Confidence 58999999998887777765 35688898864 3566666665321 1112556777544 55 67899987642
Q ss_pred cChhhhccccccchh-hccCceEEEeecCc
Q 027423 169 LSPKYLNKTLPDLAR-VASDGVLIFAGISS 197 (223)
Q Consensus 169 LspryLNkTLPeLaR-vsadglViF~G~P~ 197 (223)
|+-+.+.+.++.| +..+|+++++-++.
T Consensus 195 --p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 --VHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred --cccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 3344455555443 46788998887765
No 179
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=56.35 E-value=2.4 Score=34.71 Aligned_cols=113 Identities=18% Similarity=0.194 Sum_probs=65.3
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhh---------hcceeee
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---------KGIVRVA 144 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVr---------KGiVRvA 144 (223)
.|.+..+|.+.. ..-.+||.+|-.++.+...+++.. ..+.-+||.-+ ++-..|+.-.. +=-+.++
T Consensus 65 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~ 139 (283)
T 2i7c_A 65 HEMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE--TVIEVSKIYFKNISCGYEDKRVNVFIE 139 (283)
T ss_dssp HHHHHHHHHTTS---SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred HHHHHHHHHhcC---CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHhHHhccccCCCcEEEEEC
Confidence 455555665421 234799999999999999999764 35666666432 12223333221 1125566
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--ccccccchh-hccCceEEEe
Q 027423 145 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 145 DIkfpLPYR~kSFSlVIVSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~ 193 (223)
|..--++-...+|++||+ |+.|...|. .| ...+-++.| +..+|++++.
T Consensus 140 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 140 DASKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp CHHHHHHHCCSCEEEEEE-ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ChHHHHHhCCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 764334433678999886 665554432 11 233344444 4678888876
No 180
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=55.79 E-value=14 Score=26.95 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=56.4
Q ss_pred cceeeeecCCcchhhhhccccc---cccccccccccccchhHHHHhhhhhcceeeeeecCCC-------C----------
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE---ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-------P---------- 151 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe---etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpL-------P---------- 151 (223)
-.+||.+|-.|-.+...|.+.- ..+..|||..++... ..=.+..+|+.-.. |
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccchhhhhhccccccccccchhh
Confidence 3689999998877766666653 578999998885321 11123345654321 1
Q ss_pred -------CCCCCccEEEecccccccChhhh---------ccccccchhh-ccCceEEEeec
Q 027423 152 -------YRAKSFPLVIVSDALDYLSPKYL---------NKTLPDLARV-ASDGVLIFAGI 195 (223)
Q Consensus 152 -------YR~kSFSlVIVSDaLDyLspryL---------NkTLPeLaRv-sadglViF~G~ 195 (223)
+...+|++|+..-++.+...... .+.|.+..|+ ..+|.+++.-+
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 34568999986444444311111 1245556665 66788877543
No 181
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=54.92 E-value=16 Score=27.19 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=54.4
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhcc--eeeeeecCCCCCCCCCccEEEeccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI--VRVADIKFPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKGi--VRvADIkfpLPYR~kSFSlVIVSDa 165 (223)
-.+||-+|-.+......|.+.- ..+..|||+.+ ++-+..+++..--..- +..+|..-.+|.-.. |++|++. +
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~-~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD-C 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE-T
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc-C
Confidence 3689999999988777666542 57888998753 3334444432211111 344666444454456 9999864 2
Q ss_pred ccccChhhhccccccchh-hccCceEEEe
Q 027423 166 LDYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 166 LDyLspryLNkTLPeLaR-vsadglViF~ 193 (223)
-.--.+.+| .++.| +..+|++++.
T Consensus 135 ~~~~~~~~l----~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 135 DVFNGADVL----ERMNRCLAKNALLIAV 159 (210)
T ss_dssp TTSCHHHHH----HHHGGGEEEEEEEEEE
T ss_pred ChhhhHHHH----HHHHHhcCCCeEEEEE
Confidence 111113334 34443 4567888773
No 182
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=50.82 E-value=11 Score=30.78 Aligned_cols=97 Identities=20% Similarity=0.262 Sum_probs=55.9
Q ss_pred ceeeeecCCcchhhhhcccc--ccccccccccccc--cchhHHHHhhhhhcc-eeeeeecCCCCCC--CCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFPLPYR--AKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPydi--edad~~CKsLVrKGi-VRvADIkfpLPYR--~kSFSlVIVSDa 165 (223)
.+||-+|-.|-...+.|.+- .+....|||..+- ++.-..++. +.++ ...+|+.-|.+|+ ..+|++|+ +|+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~~~~~D~I~-~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSVVENVDVLY-VDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTTCCCEEEEE-ECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhccccceEEEE-ecC
Confidence 58999988876666555432 3568899987652 232223322 1232 3468888777665 46899876 454
Q ss_pred ccccChhhhccccccchh--hccCceEEEeecC
Q 027423 166 LDYLSPKYLNKTLPDLAR--VASDGVLIFAGIS 196 (223)
Q Consensus 166 LDyLspryLNkTLPeLaR--vsadglViF~G~P 196 (223)
-. | ..-+.|.+.++ +..+|.++++=++
T Consensus 155 a~---~-~~~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 155 AQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp CC---T-THHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CC---h-hHHHHHHHHHHHhCCCCeEEEEEEcc
Confidence 32 2 11122333344 6778888877433
No 183
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=50.78 E-value=13 Score=29.85 Aligned_cols=93 Identities=5% Similarity=-0.034 Sum_probs=59.3
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhc-c-eeeeeecCCCCCCCCCccEEEecccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKG-I-VRVADIKFPLPYRAKSFPLVIVSDALDY 168 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKG-i-VRvADIkfpLPYR~kSFSlVIVSDaLDy 168 (223)
.+||-+|-.|...--.+.+....+..|||.- -++.+..|++..--.. + +..+|+.-.++ ..+|++||. |.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~-~~--- 200 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM-GY--- 200 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE-CC---
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEE-CC---
Confidence 5899999999888777777655578998864 3666766665321122 2 45677755555 788999976 32
Q ss_pred cChhhhccccccchhhcc-CceEEEe
Q 027423 169 LSPKYLNKTLPDLARVAS-DGVLIFA 193 (223)
Q Consensus 169 LspryLNkTLPeLaRvsa-dglViF~ 193 (223)
|....+.++++.|+-. +|++++.
T Consensus 201 --p~~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 201 --VVRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred --chhHHHHHHHHHHHCCCCeEEEEE
Confidence 2222345566666544 5666664
No 184
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=50.73 E-value=5.1 Score=30.46 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=56.6
Q ss_pred ceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh--hcceeeeeecCCCCCC--CCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYR--AKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVr--KGiVRvADIkfpLPYR--~kSFSlVIVSDa 165 (223)
.+||-+|-.+......|.+.- ..+..|||+.+ ++-+..+++..-- +=-+..+|+.-.+|.- ..+|++|++...
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 135 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAA 135 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGG
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCC
Confidence 489999999877766666543 56788888643 3344444443211 1123446665545544 578999987554
Q ss_pred ccccChhhhccccccchhhccCceEEEe
Q 027423 166 LDYLSPKYLNKTLPDLARVASDGVLIFA 193 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRvsadglViF~ 193 (223)
.. --+++|+.... .+..+|++++.
T Consensus 136 ~~-~~~~~l~~~~~---~L~pgG~lv~~ 159 (233)
T 2gpy_A 136 KG-QYRRFFDMYSP---MVRPGGLILSD 159 (233)
T ss_dssp GS-CHHHHHHHHGG---GEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---HcCCCeEEEEE
Confidence 32 12344444332 24567888875
No 185
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=50.32 E-value=13 Score=29.54 Aligned_cols=101 Identities=15% Similarity=0.183 Sum_probs=62.6
Q ss_pred ccccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhhh---hcc----eeeeeecCCCC--CCCCC
Q 027423 89 GDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLP--YRAKS 156 (223)
Q Consensus 89 GdsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLVr---KGi----VRvADIkfpLP--YR~kS 156 (223)
...-.+||-||-.+-.....|.+.- +....|||+.+ ++-|..+++.|-+ .++ +..+|+.-.|| +...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3445689999999988888777663 57889999875 4456666665421 222 34577765566 66789
Q ss_pred ccEEEecccccccChhhh----------ccccccchhh-ccCceEEEe
Q 027423 157 FPLVIVSDALDYLSPKYL----------NKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 157 FSlVIVSDaLDyLspryL----------NkTLPeLaRv-sadglViF~ 193 (223)
|+.|++. |-.|-.- ...|-+++|+ ..+|.++|+
T Consensus 124 ~D~v~~~----~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 124 LTKMFFL----FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEEE----SCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEEe----CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 9998753 2233211 1245566766 456777775
No 186
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=49.81 E-value=7.4 Score=30.96 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=43.6
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeee-cCCCCCCCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADI-KFPLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADI-kfpLPYR~kSFSlVIVSDaLDyL 169 (223)
.+||-+||.+-..-..|++.. .+..|||.-+ ++-+..+++.. .+--+..+|+ ++++|- ..+| +|++|.-=+.
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~~~~~~-~~~~--~vv~nlPy~~ 106 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFKFPK-NQSY--KIFGNIPYNI 106 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCCCCS-SCCC--EEEEECCGGG
T ss_pred CEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHhCCccc-CCCe--EEEEeCCccc
Confidence 579999999999888887665 6788888643 23333333321 1223455665 334432 1334 7888754444
Q ss_pred Ch
Q 027423 170 SP 171 (223)
Q Consensus 170 sp 171 (223)
+.
T Consensus 107 ~~ 108 (244)
T 1qam_A 107 ST 108 (244)
T ss_dssp HH
T ss_pred CH
Confidence 33
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=49.71 E-value=12 Score=29.34 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=62.9
Q ss_pred hHHHHhhhhHHHHHhccc-cceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhh-cce--eeee
Q 027423 74 TSEIQRAIPILKKAYGDS-MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK-GIV--RVAD 145 (223)
Q Consensus 74 t~eV~~aiP~LkkaYGds-M~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrK-GiV--RvAD 145 (223)
..+..+.+-.|-+..+.. -.+||-+|..+-..--.|.+. .+.+..|||..+ ++-+..+++..--. .-| +.+|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 355555566666655421 228999999887766656553 357888888754 34455554432111 122 3444
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027423 146 IKFPLP-YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (223)
Q Consensus 146 IkfpLP-YR~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (223)
..-.+| ....+|++|++ |+-.---++|+++.++ .+...|++++.
T Consensus 118 a~~~l~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~d 162 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFG-QVSPMDLKALVDAAWP---LLRRGGALVLA 162 (221)
T ss_dssp HHHHGGGSCTTCEEEEEE-CCCTTTHHHHHHHHHH---HEEEEEEEEET
T ss_pred HHHHHHHhcCCCcCeEEE-cCcHHHHHHHHHHHHH---HcCCCcEEEEe
Confidence 432233 22679999976 4321112345444432 34567777774
No 188
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=49.06 E-value=15 Score=30.84 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=66.7
Q ss_pred hHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 027423 82 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (223)
Q Consensus 82 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFS 158 (223)
+-+-++|. ..-.+||-||-.|-.....|++.- ..+.-|++ +..+-...+.. .+=-+...|+--|+| +. .
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~-~~v~~~~~d~~~~~p---~~-D 263 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFD---LPHVIQDAPAF-SGVEHLGGDMFDGVP---KG-D 263 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEe---hHHHHHhhhhc-CCCEEEecCCCCCCC---CC-C
Confidence 33444553 345789999999999888888753 34455544 32222222211 111133467654776 23 9
Q ss_pred EEEecccccccChhhhccccccchhhc-cCceEEEe
Q 027423 159 LVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 193 (223)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRvs-adglViF~ 193 (223)
+|+.+.+|.++++...-+.|-++.|+= .+|.+++.
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999999999888778888888764 56766664
No 189
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=48.71 E-value=20 Score=27.70 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=59.5
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhh--hhcceeeeeec
Q 027423 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK 147 (223)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIk 147 (223)
..+..+.+-.|-+... -.+||-+|-.+......|.+. ++.+..|||+.+ ++-+..+++..- .+=-+..+|..
T Consensus 57 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTG--AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CHHHHHHHHHHHHHHT--CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CHHHHHHHHHHHHhcC--CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444444444433332 358999999988877766664 256788888653 333433333211 11123445542
Q ss_pred C---CCCCCC--CCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027423 148 F---PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (223)
Q Consensus 148 f---pLPYR~--kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (223)
- .+|... .+|++|++ |+-.---+.|++..+ ..+...|++++.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpgG~lv~~ 181 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFI-DADKRNYPRYYEIGL---NLLRRGGLMVID 181 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEE-CSCGGGHHHHHHHHH---HTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCcCEEEE-CCCHHHHHHHHHHHH---HHcCCCeEEEEe
Confidence 1 233333 78999885 432111134444443 234567888774
No 190
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=48.58 E-value=8.3 Score=30.16 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=62.8
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeee
Q 027423 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 144 (223)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvA 144 (223)
..+..+.+-.|-+..+ -++||-+|..+......|++. ++.+..+||..+ ++-+..+++. .|+ ++.+
T Consensus 55 ~~~~~~~l~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~g~~~~i~~~~g 129 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVN--AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK---AGVEHKINFIES 129 (237)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH---TTCGGGEEEEES
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCcEEEEEc
Confidence 3444455555444432 358999999998877766654 257888888653 2334444332 233 3445
Q ss_pred eecCCCCC------CCCCccEEEecccccccChhhhccccccchhhccCceEEEe
Q 027423 145 DIKFPLPY------RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 193 (223)
Q Consensus 145 DIkfpLPY------R~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~ 193 (223)
|..--+|- ...+|.+|++ |+-.-..+.|+++.++ .+..+|++++.
T Consensus 130 da~~~l~~l~~~~~~~~~fD~I~~-d~~~~~~~~~l~~~~~---~L~pGG~lv~d 180 (237)
T 3c3y_A 130 DAMLALDNLLQGQESEGSYDFGFV-DADKPNYIKYHERLMK---LVKVGGIVAYD 180 (237)
T ss_dssp CHHHHHHHHHHSTTCTTCEEEEEE-CSCGGGHHHHHHHHHH---HEEEEEEEEEE
T ss_pred CHHHHHHHHHhccCCCCCcCEEEE-CCchHHHHHHHHHHHH---hcCCCeEEEEe
Confidence 55322331 1468999885 4432223455555442 34567888774
No 191
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=48.10 E-value=12 Score=28.82 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=57.6
Q ss_pred cceeeeecCCcchhhhhccc-ccccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCC---CCCccEEEecc
Q 027423 92 MHKVLHVGPDTCSVVSTLLK-EEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYR---AKSFPLVIVSD 164 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLk-EeetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR---~kSFSlVIVSD 164 (223)
-.+||-+|-.|-..--.|.+ ....+..|||+-+ ++-+..+++.+--.. -+..+|+. .+|.. ..+|++|+...
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAE-TFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHH-HHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHH-HhcccccccCCccEEEEec
Confidence 35899999998765544443 3456788988754 344555655442112 13334552 13332 57899988644
Q ss_pred cccccChhhhccccccchhh-ccCceEEEe-ecCcchh
Q 027423 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFA-GISSMFH 200 (223)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~-G~P~q~~ 200 (223)
+ .-+.+.+.++.|+ ..+|.+++. |...+.+
T Consensus 150 -~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~ 181 (240)
T 1xdz_A 150 -V-----ARLSVLSELCLPLVKKNGLFVALKAASAEEE 181 (240)
T ss_dssp -C-----SCHHHHHHHHGGGEEEEEEEEEEECC-CHHH
T ss_pred -c-----CCHHHHHHHHHHhcCCCCEEEEEeCCCchHH
Confidence 2 1234555666554 567787776 5433333
No 192
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=47.94 E-value=14 Score=32.54 Aligned_cols=95 Identities=20% Similarity=0.189 Sum_probs=64.8
Q ss_pred cceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhcc---eeeeeecCCCCCCCCCccEEEecccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKGI---VRVADIKFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKGi---VRvADIkfpLPYR~kSFSlVIVSDaL 166 (223)
-.+||-+|-.+-..--.|.+. ..+..|||.. -+++|..|++. .|+ +..+|+.-.+|- +|++||+ |
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~---ngl~v~~~~~d~~~~~~~---~fD~Vv~-d-- 360 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEI---NNVDAEFEVASDREVSVK---GFDTVIV-D-- 360 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH---HTCCEEEEECCTTTCCCT---TCSEEEE-C--
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEECChHHcCcc---CCCEEEE-c--
Confidence 358999999988877666654 5688999865 36677777653 232 455676544432 7998886 3
Q ss_pred cccChh--hhccccccchhhccCceEEEeecCcch
Q 027423 167 DYLSPK--YLNKTLPDLARVASDGVLIFAGISSMF 199 (223)
Q Consensus 167 DyLspr--yLNkTLPeLaRvsadglViF~G~P~q~ 199 (223)
.|| +-.+.+..++++..+|+|+++-+|...
T Consensus 361 ---PPr~g~~~~~~~~l~~l~p~givyvsc~p~tl 392 (425)
T 2jjq_A 361 ---PPRAGLHPRLVKRLNREKPGVIVYVSCNPETF 392 (425)
T ss_dssp ---CCTTCSCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred ---CCccchHHHHHHHHHhcCCCcEEEEECChHHH
Confidence 232 122356677888899999999988765
No 193
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=47.37 E-value=28 Score=28.38 Aligned_cols=67 Identities=13% Similarity=0.237 Sum_probs=44.6
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhhhc--ceeeeeecCCCCCCCCCc---cEEEe
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF---PLVIV 162 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVrKG--iVRvADIkfpLPYR~kSF---SlVIV 162 (223)
.+||-+|-.|..+.-.|.++...+.+|||.. -++-+..|++.+--.+ -+..+|+.-++| .+| ++|+.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Ivs 198 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMILS 198 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEEE
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEEE
Confidence 4899999999988888877756678888864 3455666665442111 234567665555 578 88765
No 194
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=46.12 E-value=8.7 Score=30.44 Aligned_cols=119 Identities=13% Similarity=0.131 Sum_probs=67.6
Q ss_pred chHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc--ceeeeee
Q 027423 73 CTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADI 146 (223)
Q Consensus 73 Ct~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG--iVRvADI 146 (223)
...+..+.+-.|-+..+ -++||-+|-.+-..--.|.+. ++.+..|||..+ ++-+..+++..=-.. -++.+|.
T Consensus 44 i~~~~~~~l~~l~~~~~--~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTR--AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp CCHHHHHHHHHHHHHHT--CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred cCHHHHHHHHHHHhhcC--cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 44444454444444332 369999999887766666552 367889998654 566777766432222 2445666
Q ss_pred cCCCCCC-----CCCccEEEecccccccChhhhccccccchh-hccCceEEEe--ecCcc
Q 027423 147 KFPLPYR-----AKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA--GISSM 198 (223)
Q Consensus 147 kfpLPYR-----~kSFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~--G~P~q 198 (223)
.-.+|.- ..+|++|++ |+-.--.++||+ ++.| +...|++++. -++|.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~-d~~~~~~~~~l~----~~~~~LkpGG~lv~d~~~~~g~ 176 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFI-DADKTNYLNYYE----LALKLVTPKGLIAIDNIFWDGK 176 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEE-ESCGGGHHHHHH----HHHHHEEEEEEEEEECSSSSSC
T ss_pred HHHHHHHhhccCCCCEeEEEE-cCChHHhHHHHH----HHHHhcCCCeEEEEECCccCCc
Confidence 4444432 478999876 332111123444 4334 4567888873 44443
No 195
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=45.98 E-value=41 Score=24.94 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=56.7
Q ss_pred ccceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHH-hhhhhc----ceeeeeecCCCCCCCCCccEEEe
Q 027423 91 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCK-SLVHKG----IVRVADIKFPLPYRAKSFPLVIV 162 (223)
Q Consensus 91 sM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CK-sLVrKG----iVRvADIkfpLPYR~kSFSlVIV 162 (223)
.-.+||-+|-.+......|.+.. ..+..|||+.+ ++.+-.+.+ ..-++| -+..+|+.- +|+-..+ ..|.+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CEEEE
Confidence 44689999999999888887754 67899998765 222221111 112233 245677754 6665554 55442
Q ss_pred cccccccChhhh---ccccccchhh-ccCceEEEe
Q 027423 163 SDALDYLSPKYL---NKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 163 SDaLDyLspryL---NkTLPeLaRv-sadglViF~ 193 (223)
.=...-+-..++ .+.|.++.|+ ..+|.++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 110000000111 5667788886 456777765
No 196
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=45.10 E-value=17 Score=29.88 Aligned_cols=68 Identities=21% Similarity=0.232 Sum_probs=39.3
Q ss_pred ceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh-hhcceeeeee-cCCCCCCCCCccEEEecccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADI-KFPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV-rKGiVRvADI-kfpLPYR~kSFSlVIVSDaL 166 (223)
.+||-+|+.+-..-..|++. ..+..|||..+ ++.+..+++..- .+=-+..+|+ +++++ +|++|+. |.-
T Consensus 44 ~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~----~~D~Vv~-n~p 115 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP----KFDVCTA-NIP 115 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC----CCSEEEE-ECC
T ss_pred CEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc----cCCEEEE-cCC
Confidence 58999999999988877765 56888888653 344444443210 1111344565 44433 7887764 543
No 197
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=43.34 E-value=20 Score=26.77 Aligned_cols=113 Identities=15% Similarity=0.135 Sum_probs=62.2
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc--ceeeeeec
Q 027423 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIK 147 (223)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIk 147 (223)
+.+..+.+-.|-+... -.+||-+|..+-.....|.+.- ..+..|||..+ ++-+..+++..--.. -+..+|+.
T Consensus 43 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQG--ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp CHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444455544433332 3689999999988777776652 56888888654 444555554321111 23456663
Q ss_pred CCCCC---CC-CCccEEEecccccccChhhhccccccchh-hccCceEEEe
Q 027423 148 FPLPY---RA-KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 148 fpLPY---R~-kSFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~ 193 (223)
-.+|- .. .+|++|++ |+-.--.++||+ ++.| +..+|++++.
T Consensus 121 ~~~~~~~~~~~~~fD~v~~-d~~~~~~~~~l~----~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFI-DADKQNNPAYFE----WALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEE-CSCGGGHHHHHH----HHHHTCCTTCEEEEE
T ss_pred HHHHHHHhcCCCCcCEEEE-cCCcHHHHHHHH----HHHHhcCCCcEEEEe
Confidence 33332 11 57999875 332212234444 4434 4567777765
No 198
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=42.46 E-value=13 Score=32.45 Aligned_cols=46 Identities=24% Similarity=0.427 Sum_probs=31.4
Q ss_pred cChhhhcc---ccccchhhccCceEEEeecCcchhhccc-cchhHHHHHHHhh
Q 027423 169 LSPKYLNK---TLPDLARVASDGVLIFAGISSMFHLMKF-SSDTWTEIHALMY 217 (223)
Q Consensus 169 LspryLNk---TLPeLaRvsadglViF~G~P~q~~L~kf-ssswW~r~~~~~~ 217 (223)
-++.+||+ ++|+...-.-||+|| ||-|-.. ..| .-.||.+.-.+|-
T Consensus 92 ~~~~hl~~~y~~f~~~~~~~~DglII-TGsP~~~--~~~ed~~yw~el~~li~ 141 (312)
T 2h2w_A 92 TPIEHILKFYTTFSAVKDRKFDGFII-TGAPVEL--LPFEEVDYWEELTEIME 141 (312)
T ss_dssp SCHHHHHHHCBCGGGTTTCCEEEEEE-CCCSCTT--SCGGGSTTHHHHHHHHH
T ss_pred ccHHHHhhccCCcccccccCcCEEEE-CCCCCCC--CCCccCchHHHHHHHHH
Confidence 45678887 788886666788776 8888422 234 4679988766653
No 199
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=42.35 E-value=32 Score=30.43 Aligned_cols=131 Identities=11% Similarity=0.072 Sum_probs=76.4
Q ss_pred hhhHHHHHhc------cccceeeeecCCcchhhhhcccc-ccccccccc--cccccchhHHHHhhhhhcceeeeeecCCC
Q 027423 80 AIPILKKAYG------DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVE--PYDIEDADARCKSLVHKGIVRVADIKFPL 150 (223)
Q Consensus 80 aiP~LkkaYG------dsM~kVLHVGPdtC~VVs~LLkE-eetEAWGVE--Pydiedad~~CKsLVrKGiVRvADIkfpL 150 (223)
-+|.|..-|. ..-.+||-+|=.+=-+---+..+ ...+.|++. +=-+|=+..++..+=-.+-+++.|.--+.
T Consensus 115 RLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~ 194 (281)
T 3lcv_B 115 RLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR 194 (281)
T ss_dssp HGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC
T ss_pred HhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC
Confidence 3688888887 44668888876654444444444 566777752 11223345555443333456777755444
Q ss_pred CCCCCCccEEEecccccccChhhhccccccchhhccCceEEEeecCcc----h--hhccccchhHHHHHH
Q 027423 151 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGISSM----F--HLMKFSSDTWTEIHA 214 (223)
Q Consensus 151 PYR~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G~P~q----~--~L~kfssswW~r~~~ 214 (223)
| +-.|++|+..+++.+|...-=-.-+-=+.++.++|+|| .+|-+ + .+-.+-+.||.+..+
T Consensus 195 p--~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvV--Sfp~ksl~Grs~gm~~~Y~~~~e~~~~ 260 (281)
T 3lcv_B 195 L--DEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVV--TFPTKSLGQRSKGMFQNYSQSFESQAR 260 (281)
T ss_dssp C--CSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEE--EEECC-------CHHHHHHHHHHHHHH
T ss_pred C--CCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEE--eccchhhcCCCcchhhHHHHHHHHHHH
Confidence 3 56789998877777775441111111346788888877 44442 1 444467788887654
No 200
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=42.27 E-value=14 Score=30.14 Aligned_cols=108 Identities=16% Similarity=0.092 Sum_probs=61.0
Q ss_pred HHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHh----hhh-hcceeeeeec
Q 027423 75 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS----LVH-KGIVRVADIK 147 (223)
Q Consensus 75 ~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKs----LVr-KGiVRvADIk 147 (223)
.|.+..+|.+. -..-++||.+|-.++.+...+++.. .+..+||.-+ ++-+..+... +-. +=-+.++|..
T Consensus 59 ~e~l~~~~~~~---~~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~ 134 (262)
T 2cmg_A 59 SELLAHMGGCT---KKELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD 134 (262)
T ss_dssp HHHHHHHHHTT---SSCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG
T ss_pred HHHHHHHhhhc---CCCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHH
Confidence 34455555442 1244799999999999999999884 7778887542 1212222111 100 1123445653
Q ss_pred CCCCCCCCCccEEEecccccccChhhhccccccchh-hccCceEEEe-ecCc
Q 027423 148 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA-GISS 197 (223)
Q Consensus 148 fpLPYR~kSFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~-G~P~ 197 (223)
--+ .+|++||+ |+-| |.. .+.++.| +..+|++++. |.|.
T Consensus 135 ~~~----~~fD~Ii~-d~~d---p~~---~~~~~~~~L~pgG~lv~~~~~~~ 175 (262)
T 2cmg_A 135 LDI----KKYDLIFC-LQEP---DIH---RIDGLKRMLKEDGVFISVAKHPL 175 (262)
T ss_dssp SCC----CCEEEEEE-SSCC---CHH---HHHHHHTTEEEEEEEEEEEECTT
T ss_pred HHH----hhCCEEEE-CCCC---hHH---HHHHHHHhcCCCcEEEEEcCCcc
Confidence 222 78998886 5433 332 3445444 4567877775 5664
No 201
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=41.50 E-value=13 Score=29.04 Aligned_cols=71 Identities=13% Similarity=0.016 Sum_probs=46.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhh--cceeeeeecCCCC-CCCCCccEEEe
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLP-YRAKSFPLVIV 162 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrK--GiVRvADIkfpLP-YR~kSFSlVIV 162 (223)
-.+||-+|-.|-.+--.|.+....+..|||.-+ ++-+..|++..--. --+..+|+.-..+ +...+|++||.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEE
Confidence 458999999988777777766555888888643 44455555433211 2345577764443 45789999987
No 202
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=40.81 E-value=8.7 Score=30.10 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=42.3
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhhhhcceeeeeecCCCCCCC-CCccEEEecc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA-KSFPLVIVSD 164 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLPYR~-kSFSlVIVSD 164 (223)
-.+||-+|+.+..+...|.+.. .+..|||.-+ ++-+..+++ ...+--+..+|+. .+|+.. .+| +|++|
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~-~~~~~~~~~f--~vv~n 100 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDIL-QFQFPNKQRY--KIVGN 100 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCT-TTTCCCSSEE--EEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChh-hcCcccCCCc--EEEEe
Confidence 3589999999988877777664 7889998643 344555554 1112234456763 234432 577 56665
No 203
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=40.31 E-value=28 Score=31.16 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=54.2
Q ss_pred ceeeeecCCcchhhhhccccccccccccccccccchhHHHHhhhh-hcc---e--eeeeec-CCCCCCCCCccEEEeccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIK-FPLPYRAKSFPLVIVSDA 165 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad~~CKsLVr-KGi---V--RvADIk-fpLPYR~kSFSlVIVSDa 165 (223)
.+||-||-.|-.+.-.|.+....+..|||.-++ + ..++..++ .|+ | ..+|+. +++| .+|++|+..-.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~--l-~~A~~~~~~~gl~~~v~~~~~d~~~~~~~---~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHHH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHHH--H-HHHHHHHHHcCCCCcEEEEECchhhCccC---CCeEEEEEeCc
Confidence 589999999987776666655668899987652 2 22333222 233 3 344553 2444 57998775433
Q ss_pred ccccChhhhccccccchhh-ccCceEEE
Q 027423 166 LDYLSPKYLNKTLPDLARV-ASDGVLIF 192 (223)
Q Consensus 166 LDyLspryLNkTLPeLaRv-sadglViF 192 (223)
+.++...-+..++-++.|+ ..+|++++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 3445433333344444554 55677764
No 204
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=39.25 E-value=27 Score=28.44 Aligned_cols=66 Identities=26% Similarity=0.319 Sum_probs=40.5
Q ss_pred cceeeeecCCcchhhhhcccccccccccccccc--ccchhHHHHhhh--hhcceeeeeec-CCCCCCCCCccEEEe
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIK-FPLPYRAKSFPLVIV 162 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEPyd--iedad~~CKsLV--rKGiVRvADIk-fpLPYR~kSFSlVIV 162 (223)
=.+||-|||.+......|++. ..+..|||+-+ ++.+..+++..- .+=-+..+|+- +++| +|+.|+.
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~----~fD~vv~ 99 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP----FFDTCVA 99 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC----CCSEEEE
T ss_pred CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch----hhcEEEE
Confidence 358999999999988888766 45788888643 233333333210 12224456763 4555 6886655
No 205
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=38.95 E-value=10 Score=32.69 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=22.7
Q ss_pred hhhhccccccchhhccCc-eEEEeecCcch
Q 027423 171 PKYLNKTLPDLARVASDG-VLIFAGISSMF 199 (223)
Q Consensus 171 pryLNkTLPeLaRvsadg-lViF~G~P~q~ 199 (223)
---+|+|||+|-+.+.++ .||..| |+-.
T Consensus 195 stlvN~Tl~~lL~~~~~a~~vvl~G-PStp 223 (270)
T 3l5o_A 195 ASVVDKTLPRLLELSRNARRITLVG-PGTP 223 (270)
T ss_dssp HHHHHTCHHHHHHHTTTSSEEEEES-TTCC
T ss_pred ehhhcCCHHHHHhhCCCCCEEEEEC-CCch
Confidence 456999999999999776 788889 6554
No 206
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=38.78 E-value=31 Score=29.41 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=56.4
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc-cccch-hHHHHhhhhhcceeeeeecC-CCCCCCCCccEEEeccccccc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY-DIEDA-DARCKSLVHKGIVRVADIKF-PLPYRAKSFPLVIVSDALDYL 169 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy-dieda-d~~CKsLVrKGiVRvADIkf-pLPYR~kSFSlVIVSDaLDyL 169 (223)
..||-+|-.|-..-..|++....+.+||+.- +|=+. -.+=...+......+.++.. .||. .+|++|++ |.. +.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~-d~s-f~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE--GLPSFASI-DVS-FI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT--CCCSEEEE-CCS-SS
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC--CCCCEEEE-Eee-Hh
Confidence 5899999999988888888877789999884 33332 11000000000001111111 1332 36998775 543 22
Q ss_pred Chhhhccccccchhhcc-CceEEEeecC
Q 027423 170 SPKYLNKTLPDLARVAS-DGVLIFAGIS 196 (223)
Q Consensus 170 spryLNkTLPeLaRvsa-dglViF~G~P 196 (223)
.|.+.||++.|+-. +|.+|+.=.|
T Consensus 163 ---sl~~vL~e~~rvLkpGG~lv~lvkP 187 (291)
T 3hp7_A 163 ---SLNLILPALAKILVDGGQVVALVKP 187 (291)
T ss_dssp ---CGGGTHHHHHHHSCTTCEEEEEECG
T ss_pred ---hHHHHHHHHHHHcCcCCEEEEEECc
Confidence 46999999999866 4566665334
No 207
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=38.27 E-value=14 Score=31.94 Aligned_cols=46 Identities=26% Similarity=0.521 Sum_probs=25.8
Q ss_pred cChhhhcc---ccccchhhccCceEEEeecCcchhhccc-cchhHHHHHHHhh
Q 027423 169 LSPKYLNK---TLPDLARVASDGVLIFAGISSMFHLMKF-SSDTWTEIHALMY 217 (223)
Q Consensus 169 LspryLNk---TLPeLaRvsadglViF~G~P~q~~L~kf-ssswW~r~~~~~~ 217 (223)
-++.+||+ ++|+...-.-||+|| ||-|-. ...| .-.||.+.-.+|-
T Consensus 80 ~~~~hl~~~y~~f~~~~~~~~DglII-TGap~~--~~~~ed~~yw~el~~li~ 129 (301)
T 2vdj_A 80 VAQEHLTSFYKTFRDIENEKFDGLII-TGAPVE--TLSFEEVDYWEELKRIME 129 (301)
T ss_dssp -------CCEECHHHHTTSCEEEEEE-CCCTTT--TSCGGGSTTHHHHHHHHH
T ss_pred ccHHHHhhcccCcccccccccCEEEE-CCCCCc--CCCcccCchHHHHHHHHH
Confidence 35668887 688775556788776 888842 2234 4679988766653
No 208
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=36.81 E-value=48 Score=27.76 Aligned_cols=104 Identities=12% Similarity=0.155 Sum_probs=66.7
Q ss_pred hHHHHHhc--cccceeeeecCCcchhhhhccccc-cccccccccccccchhHHHHhhhhhcceeeeeecCCCCCCCCCcc
Q 027423 82 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 158 (223)
Q Consensus 82 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPydiedad~~CKsLVrKGiVRvADIkfpLPYR~kSFS 158 (223)
+-+-++|. +.-.+||-||-.|-.....|++.- ..+.-+ +|+..+-...+.. .+=-+...|+--|+| +. .
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~-~~v~~~~~D~~~~~p---~~-D 261 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVN---FDLPHVISEAPQF-PGVTHVGGDMFKEVP---SG-D 261 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE---EECHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEE---ecCHHHHHhhhhc-CCeEEEeCCcCCCCC---CC-C
Confidence 44445553 345789999999999988888753 334433 3443322222221 111233467644777 23 9
Q ss_pred EEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 159 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 159 lVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
+|+.+.+|.++++...-+.|-++.|+ ..+|.+++.
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 99999999999988888888888886 456766664
No 209
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=36.22 E-value=13 Score=30.53 Aligned_cols=101 Identities=22% Similarity=0.300 Sum_probs=55.4
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhh----h-hhcceeeeeec-CCCCCCCCCccEEEe
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL----V-HKGIVRVADIK-FPLPYRAKSFPLVIV 162 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsL----V-rKGiVRvADIk-fpLPYR~kSFSlVIV 162 (223)
-.+||.+|-.+..+...|++.. ..+..|||.-+ ++-+..+...+ . .+=-+..+|+. ++......+|++||+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 3689999999999999999863 45777777542 22222222111 1 11124566753 222223678999886
Q ss_pred cccccccCh-hhh--ccccccchhh-ccCceEEEe
Q 027423 163 SDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 163 SDaLDyLsp-ryL--NkTLPeLaRv-sadglViF~ 193 (223)
|..+...| ..| ...+-++.|+ ..+|++++.
T Consensus 176 -d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 176 -DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp -ECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 66665443 111 2334455554 567777775
No 210
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=35.21 E-value=32 Score=26.37 Aligned_cols=71 Identities=10% Similarity=-0.010 Sum_probs=43.0
Q ss_pred ceeeeecCCcchhhhhccccc-cccccccccc--cccchhHHHHhhhhhc--ceeeeeecC----CCCCC-CCCccEEEe
Q 027423 93 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPY--DIEDADARCKSLVHKG--IVRVADIKF----PLPYR-AKSFPLVIV 162 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPy--diedad~~CKsLVrKG--iVRvADIkf----pLPYR-~kSFSlVIV 162 (223)
.+||-+|-.|..+...|++.- ..+..|||.. -++-|..+++..--.. -+..+|+.- ++|-. ..+|++|+.
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~ 146 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMC 146 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEE
T ss_pred CEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEE
Confidence 489999999988777776653 4678888754 3455555554331111 234456431 34432 268999876
Q ss_pred c
Q 027423 163 S 163 (223)
Q Consensus 163 S 163 (223)
.
T Consensus 147 n 147 (254)
T 2h00_A 147 N 147 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 211
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=34.48 E-value=47 Score=28.76 Aligned_cols=124 Identities=11% Similarity=0.110 Sum_probs=66.2
Q ss_pred hhHHHHHhc-----cccceeeeecCCcchhhhhccccccccccccccccccc-----hhHHHHhhhhhcceeeeeecCCC
Q 027423 81 IPILKKAYG-----DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIED-----ADARCKSLVHKGIVRVADIKFPL 150 (223)
Q Consensus 81 iP~LkkaYG-----dsM~kVLHVGPdtC~VVs~LLkEeetEAWGVEPydied-----ad~~CKsLVrKGiVRvADIkfpL 150 (223)
+|.|..-|. ..-.+||-+|=.+=-.---+. .....|| +||+. +..++..+=-..-++++|.--..
T Consensus 90 Lp~ld~fY~~i~~~~~p~~VLDlGCG~gpLal~~~--~~~~y~a---~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~ 164 (253)
T 3frh_A 90 LAELDTLYDFIFSAETPRRVLDIACGLNPLALYER--GIASVWG---CDIHQGLGDVITPFAREKDWDFTFALQDVLCAP 164 (253)
T ss_dssp GGGHHHHHHHHTSSCCCSEEEEETCTTTHHHHHHT--TCSEEEE---EESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC
T ss_pred hhhHHHHHHHHhcCCCCCeEEEecCCccHHHHHhc--cCCeEEE---EeCCHHHHHHHHHHHHhcCCCceEEEeecccCC
Confidence 677777762 235689999864432222222 4555555 34443 23332222222335677765443
Q ss_pred CCCCCCccEEEecccccccChhhhccccccchhhccCceEEEeecCcch------hhccccchhHHHHH
Q 027423 151 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGISSMF------HLMKFSSDTWTEIH 213 (223)
Q Consensus 151 PYR~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G~P~q~------~L~kfssswW~r~~ 213 (223)
-+.+|++|++.+++.+|....=---+-=|.|+.+.++|| .+|.++ .+-.+-+.||.+.-
T Consensus 165 --~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvV--sfPtksl~Gr~~gm~~~Y~~~~e~~~ 229 (253)
T 3frh_A 165 --PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAV--SFPTRSLGGRGKGMEANYAAWFEGGL 229 (253)
T ss_dssp --CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEE--EEECC-----------CHHHHHHHHS
T ss_pred --CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEE--EcChHHhcCCCcchhhHHHHHHHHHh
Confidence 245899999988777774322111122345888888776 677443 44456677777653
No 212
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=33.51 E-value=24 Score=29.34 Aligned_cols=42 Identities=17% Similarity=0.306 Sum_probs=33.6
Q ss_pred CCCccEEEecccccccChhhhccccccchhhccCceEEEeec
Q 027423 154 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGI 195 (223)
Q Consensus 154 ~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G~ 195 (223)
..+|++|+..+.|-|++|.-..+.+..+.++=..|=++|.|.
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 468999999999999999988999999998754444444443
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=33.34 E-value=7.3 Score=33.80 Aligned_cols=97 Identities=14% Similarity=0.242 Sum_probs=55.0
Q ss_pred eeeeecCCcchhhhhcccc-ccccccccccccccchhHHHHhhhh-----hcceeeeeec-CCCCCCCCCccEEEecccc
Q 027423 94 KVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH-----KGIVRVADIK-FPLPYRAKSFPLVIVSDAL 166 (223)
Q Consensus 94 kVLHVGPdtC~VVs~LLkE-eetEAWGVEPydiedad~~CKsLVr-----KGiVRvADIk-fpLPYR~kSFSlVIVSDaL 166 (223)
+||++|-.++.+...|++. .+.+.-+||.-+ ++-..|+.-.. +--|.++|.. |.-.+..++|.+||+ |+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp--~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~-D~~ 168 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDA--ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR-DVF 168 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCH--HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE-CCS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCH--HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE-CCC
Confidence 8999999999999999983 455666665422 12333433221 2235567753 322344678998875 554
Q ss_pred cccC-hhhh--ccccccch-hhccCceEEEe
Q 027423 167 DYLS-PKYL--NKTLPDLA-RVASDGVLIFA 193 (223)
Q Consensus 167 DyLs-pryL--NkTLPeLa-RvsadglViF~ 193 (223)
+... |..| -..+-++. ++..+|++++.
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 4321 2222 11122333 45678887765
No 214
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=32.35 E-value=25 Score=25.35 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=54.0
Q ss_pred ceeeeecCCcchhhhhcccc-cc---------ccccccccccccchhHHHHhhhhhccee-eeeecCCC-------CCCC
Q 027423 93 HKVLHVGPDTCSVVSTLLKE-EE---------TEAWGVEPYDIEDADARCKSLVHKGIVR-VADIKFPL-------PYRA 154 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE-ee---------tEAWGVEPydiedad~~CKsLVrKGiVR-vADIkfpL-------PYR~ 154 (223)
.+||.+|-.+-.....|.+. .. .+.+|||+.++.... ++ -+. .+|+.-+- +...
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~-~~-------~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLE-GA-------TFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCT-TC-------EEECSCCTTSHHHHHHHHHHSGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCC-CC-------eEEEeccCCCHHHHHHHHHhcCC
Confidence 58999999997666666665 22 689999988853211 11 112 34543211 1224
Q ss_pred CCccEEEeccccccc-----Chhh----hccccccchhh-ccCceEEEeecC
Q 027423 155 KSFPLVIVSDALDYL-----SPKY----LNKTLPDLARV-ASDGVLIFAGIS 196 (223)
Q Consensus 155 kSFSlVIVSDaLDyL-----spry----LNkTLPeLaRv-sadglViF~G~P 196 (223)
.+|++|+..-++++. .+.. +.+.+-++.|+ ..+|.+++.-+.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 589998864333331 1111 12455566665 567888887443
No 215
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=29.94 E-value=13 Score=28.43 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=53.8
Q ss_pred cceeeeecCCcchhhhhccccc--ccccccccccc--ccchhHHHHhhhhhc--ceeeeeecCCCCC-------------
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPY------------- 152 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe--etEAWGVEPyd--iedad~~CKsLVrKG--iVRvADIkfpLPY------------- 152 (223)
-.+||-+|-.+......|.+.- ..+..|||+.+ ++-+..+++..--.. -+..+|+.-.+|.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 3589999999887777776653 56888988653 333444443211111 2344555333331
Q ss_pred -C-C-CCccEEEecccccccChhhhccccccchhh-ccCceEEEe
Q 027423 153 -R-A-KSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 153 -R-~-kSFSlVIVSDaLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
- . .+|++|++.-..+ .+.+.+.++.|+ ..+|++++.
T Consensus 141 f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp TCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEE
Confidence 1 1 6899998753322 122334444443 457777775
No 216
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=29.39 E-value=25 Score=30.28 Aligned_cols=70 Identities=14% Similarity=0.240 Sum_probs=42.7
Q ss_pred ceeeeecCCcchhhhhcccccc-cccccccccc--ccchhHHHHhhhhhcceeeeeecCCCC-CCCCCccEEEe
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP-YRAKSFPLVIV 162 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEee-tEAWGVEPyd--iedad~~CKsLVrKGiVRvADIkfpLP-YR~kSFSlVIV 162 (223)
.+||-+|-.+-.....|.+... .+..|+|..+ ++.+..+++.+=-.--+..+|..-..+ +...+|++|++
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 4899998888776666665432 5777777544 555666655432122345567644322 34568999986
No 217
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=28.67 E-value=37 Score=24.79 Aligned_cols=25 Identities=4% Similarity=0.126 Sum_probs=11.2
Q ss_pred EEEeccccccc-Chhhhccccccchh
Q 027423 159 LVIVSDALDYL-SPKYLNKTLPDLAR 183 (223)
Q Consensus 159 lVIVSDaLDyL-spryLNkTLPeLaR 183 (223)
+|+.-|..|+- .+..+.+.+-.|++
T Consensus 36 vi~~GDl~~~~~~~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 36 IALIGNLMPKAAKSRDYAAFFRILSE 61 (228)
T ss_dssp EEEESCSSCTTCCHHHHHHHHHHHGG
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHh
Confidence 34455666654 44333333333433
No 218
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=28.04 E-value=19 Score=33.50 Aligned_cols=50 Identities=24% Similarity=0.349 Sum_probs=38.0
Q ss_pred ceeeeeec--CC---CCCCCCCccEEEecccccccChhhhccccccchhhccCceEEEee
Q 027423 140 IVRVADIK--FP---LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 194 (223)
Q Consensus 140 iVRvADIk--fp---LPYR~kSFSlVIVSDaLDyLspryLNkTLPeLaRvsadglViF~G 194 (223)
-+|||.++ .+ +||=.--| .+.++|||-..|-.|+-|.|-.-+||+||--.
T Consensus 250 A~Rva~~~~~~~lPV~~Y~r~~Y-----~~~~~fLS~~DL~~TigesaalGa~GiViWGs 304 (424)
T 2pe4_A 250 AFRVAVAAGDPNLPVLPYVQIFY-----DTTNHFLPLDELEHSLGESAAQGAAGVVLWVS 304 (424)
T ss_dssp HHHHHHHTTCTTCCBCCEECSBC-----BTSCCBCCHHHHHTTHHHHHHTTCSEEEEECC
T ss_pred HHHHHhccCCCCCceEEEEeeEe-----cCccccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 36788663 23 44432222 68889999999999999999999999999753
No 219
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.96 E-value=32 Score=23.04 Aligned_cols=16 Identities=44% Similarity=0.627 Sum_probs=12.5
Q ss_pred CCCCchhhhHHHHHHH
Q 027423 29 RSSPLLSVGLVLVGAF 44 (223)
Q Consensus 29 rsspllsi~lv~vgai 44 (223)
++||..+|+..++|.+
T Consensus 7 ~~~~~~~Ia~~vVGvl 22 (44)
T 2jwa_A 7 RASPLTSIISAVVGIL 22 (44)
T ss_dssp CCCSHHHHHHHHHHHH
T ss_pred CCCcccchHHHHHHHH
Confidence 4789988988888833
No 220
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=26.37 E-value=40 Score=27.83 Aligned_cols=100 Identities=10% Similarity=0.086 Sum_probs=55.7
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhc-ceeeeeecCCCCCCCCCccEEEec----
Q 027423 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVS---- 163 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKG-iVRvADIkfpLPYR~kSFSlVIVS---- 163 (223)
.+||-+|-.+-..-..|.+. ...+..|+|..+ ++.+..+++.+--.. .+..+|+.-..+ -..+|++|++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-LNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-GCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-ccccCCEEEEeCCCC
Confidence 48999988887776666653 346788887653 455666665431111 234456543222 35679998861
Q ss_pred ---------ccccccChhhhc-------cccccchhh-ccCceEEEe
Q 027423 164 ---------DALDYLSPKYLN-------KTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 164 ---------DaLDyLspryLN-------kTLPeLaRv-sadglViF~ 193 (223)
|+....+|..+. +.|-++.|+ ...|.++++
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 222223443332 444555554 567888885
No 221
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=26.17 E-value=47 Score=26.43 Aligned_cols=106 Identities=16% Similarity=0.065 Sum_probs=58.0
Q ss_pred cceeeeecCCcchhhhhcccc-cccccccccccc--ccchhHHHHhhhhhccee--eeeec-CCCC-CCCCCccEEEecc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGIVR--VADIK-FPLP-YRAKSFPLVIVSD 164 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPyd--iedad~~CKsLVrKGiVR--vADIk-fpLP-YR~kSFSlVIVSD 164 (223)
-.+||-||-.|-..--.|.+. .+.+..|||+.+ ++-+..+++.+=-.. |+ .+|+. ++.+ .-..+|++|+. .
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I~s-~ 158 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARAVA-R 158 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEEEE-E
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEEEE-C
Confidence 358999998887654444433 456788988765 445666666542222 33 34442 2211 12368998875 4
Q ss_pred cccccChhhhccccccchhh-ccCceEEE-eecCcchhhccc
Q 027423 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIF-AGISSMFHLMKF 204 (223)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF-~G~P~q~~L~kf 204 (223)
++.- +...+.+..|+ ..+|.+++ .|...+.|+..+
T Consensus 159 a~~~-----~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~ 195 (249)
T 3g89_A 159 AVAP-----LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPL 195 (249)
T ss_dssp SSCC-----HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTH
T ss_pred CcCC-----HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHH
Confidence 4321 23333444443 46776555 576556665543
No 222
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=26.08 E-value=18 Score=30.93 Aligned_cols=106 Identities=14% Similarity=0.119 Sum_probs=62.2
Q ss_pred ceeeeecCCcchhhhhccccccccccccccc--cccchhHHHHhhhh---hcceeeeeecCCCCC---CCCCccEEEecc
Q 027423 93 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVH---KGIVRVADIKFPLPY---RAKSFPLVIVSD 164 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkEeetEAWGVEPy--diedad~~CKsLVr---KGiVRvADIkfpLPY---R~kSFSlVIVSD 164 (223)
.+||-+|-.|..+--.+.+..-.+..|||.- -++.|..|.+..-- +--+..+|+.-.||. +..+|++||+ |
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~-D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII-D 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE-C
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE-C
Confidence 5899999999988777777665678888854 46677777664311 112455676433442 2458998875 3
Q ss_pred cccc-cChhhhcccccc---c-----hhhccCceEEEeecCcch
Q 027423 165 ALDY-LSPKYLNKTLPD---L-----ARVASDGVLIFAGISSMF 199 (223)
Q Consensus 165 aLDy-LspryLNkTLPe---L-----aRvsadglViF~G~P~q~ 199 (223)
-=-+ .++..+.+.+.+ | ..+..+|+++++..|...
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 1000 000111111222 1 446788999999887765
No 223
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=24.72 E-value=31 Score=25.73 Aligned_cols=110 Identities=18% Similarity=0.144 Sum_probs=57.3
Q ss_pred hHHHHhhhhHHHHHhccccceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc-----eeee
Q 027423 74 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 144 (223)
Q Consensus 74 t~eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi-----VRvA 144 (223)
..+..+.+-.+.+.- .-.+||-+|..+......|.+. +..+..|||+.+ ++-+..+.+. .|+ +..+
T Consensus 54 ~~~~~~~l~~l~~~~--~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~---~g~~~~i~~~~~ 128 (229)
T 2avd_A 54 TCEQAQLLANLARLI--QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQ---AEAEHKIDLRLK 128 (229)
T ss_dssp CHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHH---TTCTTTEEEEES
T ss_pred CHHHHHHHHHHHHhc--CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---CCCCCeEEEEEc
Confidence 334444443333332 2358999999988777666664 257888888654 3334333332 232 3345
Q ss_pred eecCCCC---C--CCCCccEEEecccccccChhhhccccccchh-hccCceEEEe
Q 027423 145 DIKFPLP---Y--RAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA 193 (223)
Q Consensus 145 DIkfpLP---Y--R~kSFSlVIVSDaLDyLspryLNkTLPeLaR-vsadglViF~ 193 (223)
|+.-.+| - ...+|++|+. |+-.--.++++ .++.| +..+|++++.
T Consensus 129 d~~~~~~~~~~~~~~~~~D~v~~-d~~~~~~~~~l----~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 129 PALETLDELLAAGEAGTFDVAVV-DADKENCSAYY----ERCLQLLRPGGILAVL 178 (229)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEEE-CSCSTTHHHHH----HHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCCccEEEE-CCCHHHHHHHH----HHHHHHcCCCeEEEEE
Confidence 5421111 1 1168999886 43211112333 33433 4567787774
No 224
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=24.28 E-value=18 Score=26.52 Aligned_cols=66 Identities=21% Similarity=0.273 Sum_probs=39.8
Q ss_pred HHHhhhhHHHHHhccccceeeeecCCcchhhhhccccccc-----------cccccccccccchhHHHHhhhhhcceeee
Q 027423 76 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEET-----------EAWGVEPYDIEDADARCKSLVHKGIVRVA 144 (223)
Q Consensus 76 eV~~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeet-----------EAWGVEPydiedad~~CKsLVrKGiVRvA 144 (223)
.+.+|--.+.+.|-..+++ ..+.|....|...|-.++.. +.-|++|- .+....+.|+++|+||..
T Consensus 10 ~l~ra~r~~~~~~~~~l~~-~gLt~~q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~~~~---tvsr~v~~Le~~glVr~~ 85 (148)
T 4fx0_A 10 TTRRAARQLGQAYDRALRP-SGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERT---TLTRNLEVMRRDGLVRVM 85 (148)
T ss_dssp HHHHHHHHHHHHHHHHHGG-GTCCHHHHHHHHHHHC---------CHHHHHHHHTCCHH---HHHHHHHHHHHTTSBC--
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHCCChh---hHHHHHHHHHHCCCEEee
Confidence 5677777777777766654 45666666666666554432 23344433 356788999999999976
Q ss_pred e
Q 027423 145 D 145 (223)
Q Consensus 145 D 145 (223)
|
T Consensus 86 ~ 86 (148)
T 4fx0_A 86 A 86 (148)
T ss_dssp -
T ss_pred C
Confidence 5
No 225
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=24.28 E-value=47 Score=28.92 Aligned_cols=67 Identities=13% Similarity=0.173 Sum_probs=40.5
Q ss_pred ceeeeecCCcchhhhhcccc--cccccccccccc--ccchhHHHHhhhhhcc--e--eeeeecCCCC-CCCCCccEEEe
Q 027423 93 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLP-YRAKSFPLVIV 162 (223)
Q Consensus 93 ~kVLHVGPdtC~VVs~LLkE--eetEAWGVEPyd--iedad~~CKsLVrKGi--V--RvADIkfpLP-YR~kSFSlVIV 162 (223)
.+||-+|-.+-..-..|.+. +..+..|+|..+ ++.+..+++.+ |+ | ..+|..-..+ +...+|++|++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM---GIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc---CCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 47999988877666666552 336777877654 45555555432 43 3 3356543222 54578999985
No 226
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=24.23 E-value=34 Score=27.11 Aligned_cols=72 Identities=15% Similarity=0.057 Sum_probs=45.1
Q ss_pred cceeeeecCCcchhhhhccccc-ccccccccccc--ccchhHHHHhhh-----hhcceeeeeecCCC------CCCCCCc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-----HKGIVRVADIKFPL------PYRAKSF 157 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEe-etEAWGVEPyd--iedad~~CKsLV-----rKGiVRvADIkfpL------PYR~kSF 157 (223)
-.+||-+|-.|-.+.-.|.+.. ..+..|||.-+ ++-+..|++.+- .+=-+..+|+.-.+ ++...+|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 3589999999887766665553 46788887643 333444544311 11234567876553 3567899
Q ss_pred cEEEec
Q 027423 158 PLVIVS 163 (223)
Q Consensus 158 SlVIVS 163 (223)
++||..
T Consensus 117 D~Vv~n 122 (260)
T 2ozv_A 117 HHVIMN 122 (260)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 998864
No 227
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=23.68 E-value=78 Score=25.53 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=25.1
Q ss_pred cceeeeecCCcchhhhhcccccccccccccc
Q 027423 92 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEP 122 (223)
Q Consensus 92 M~kVLHVGPdtC~VVs~LLkEeetEAWGVEP 122 (223)
-.+||-|||.+-..-..|++....+..|||.
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~~~v~avEi 62 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPLKKLYVIEL 62 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCCSEEEEECC
T ss_pred cCEEEEEcCchHHHHHHHHHcCCCeEEEEEC
Confidence 3579999999988888888775578888874
No 228
>2j0p_A HEMS, hemin transport protein HEMS; conformational changes, HAEM, iron, trans ION transport, proteobacteria, iron transport; HET: HEM 12P; 1.7A {Yersinia enterocolitica} SCOP: e.62.1.1 PDB: 2j0r_A*
Probab=23.40 E-value=14 Score=32.99 Aligned_cols=59 Identities=22% Similarity=0.350 Sum_probs=36.7
Q ss_pred HHhccccceeeeecCCcch-----hhhhccccccccccccccccc---cchhHHHHhhhhhcceeeeeec
Q 027423 86 KAYGDSMHKVLHVGPDTCS-----VVSTLLKEEETEAWGVEPYDI---EDADARCKSLVHKGIVRVADIK 147 (223)
Q Consensus 86 kaYGdsM~kVLHVGPdtC~-----VVs~LLkEeetEAWGVEPydi---edad~~CKsLVrKGiVRvADIk 147 (223)
.+.|+.|||| |+|+||=- .|.++.. +.....-++|=.- +..|.. ....|+..-.+.|++
T Consensus 130 D~~G~avhKI-yl~~~s~~~a~~~lv~~f~~-~~~~~l~~~p~~~~~~~~~~~~-~~~l~~~W~~m~D~h 196 (345)
T 2j0p_A 130 DHQGDALHKV-YVTEQTDMPAWEALLAQFIT-TENPELQLEPLSAPEVTEPTAT-DEAVDAEWRAMTDVH 196 (345)
T ss_dssp ETTSCEEEEE-ECCTTSCHHHHHHHHHHHBC-SCCCCCCCCC----------CC-HHHHHHHHHHCSSGG
T ss_pred CCCCCEEEEE-EeCCCCCHHHHHHHHHHHhh-cCCCccccCCCCCCcccCCchh-HHHHHHHHHHCcCHH
Confidence 3579999997 89999854 6777766 5554555555322 223333 466777777778876
No 229
>1sw5_A Osmoprotection protein (PROX); binding-protein, compatible solutes, cation-PI interactions, classical hydrogen bonds, protein binding; 1.80A {Archaeoglobus fulgidus} SCOP: c.94.1.1 PDB: 1sw4_A 1sw1_A 1sw2_A 3mam_A*
Probab=23.27 E-value=1.2e+02 Score=24.15 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=37.0
Q ss_pred hhhhHHHHHhccccceeeeecCCcchhhhhcccccccccc-ccccccccchhHHHHhhhhhcceeeeeecCCCC
Q 027423 79 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAW-GVEPYDIEDADARCKSLVHKGIVRVADIKFPLP 151 (223)
Q Consensus 79 ~aiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEeetEAW-GVEPydiedad~~CKsLVrKGiVRvADIkfpLP 151 (223)
..+|-++++||=+..++....|. .+..-|+.++..+| +-+|+-. +.+.+++.+.|=+--.|
T Consensus 151 ~g~~~~~~~yGl~~~~~~~~~~~---~~~~Al~~g~vd~~~~~~p~~~---------~~~~~l~~L~d~~~~~~ 212 (275)
T 1sw5_A 151 DGLPQIKKVYGFEFKEVKQMEPT---LMYEAIKNKQVDVIPAYTTDSR---------VDLFNLKILEDDKGALP 212 (275)
T ss_dssp TSHHHHHHHHTCCCSEEEECCGG---GHHHHHHTTSCSEEEEETTCHH---------HHHTTEEECBCTTCCSC
T ss_pred chHHHHHHhcCCCcccccCCCHH---HHHHHHHcCCCeEEEEeCCCcc---------hhcCCeEEccCCcccCC
Confidence 35777999999887777665443 33444555555553 3467543 22357777777554444
No 230
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=22.49 E-value=1.1e+02 Score=20.89 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=24.8
Q ss_pred cChhhhccccccchhhccCceEEEe--ecCcchhhc
Q 027423 169 LSPKYLNKTLPDLARVASDGVLIFA--GISSMFHLM 202 (223)
Q Consensus 169 LspryLNkTLPeLaRvsadglViF~--G~P~q~~L~ 202 (223)
+.-+|=-..+|...=++.+|.|+.. |.....+|.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 147 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLG 147 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHH
Confidence 5556656788999999999998876 666555444
No 231
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=21.77 E-value=29 Score=29.70 Aligned_cols=28 Identities=21% Similarity=0.434 Sum_probs=22.4
Q ss_pred hhhccccccchhhccCc-eEEEeecCcch
Q 027423 172 KYLNKTLPDLARVASDG-VLIFAGISSMF 199 (223)
Q Consensus 172 ryLNkTLPeLaRvsadg-lViF~G~P~q~ 199 (223)
--+|+|+|+|-..+.++ .||+.|--.+.
T Consensus 196 TlvN~Ti~~lL~~~~~a~~vvl~GPS~p~ 224 (270)
T 2h1q_A 196 SVVDKTLPRLLELSRNARRITLVGPGTPL 224 (270)
T ss_dssp HHHHTCHHHHHHHTTTSSEEEEESTTCCC
T ss_pred eeecCCHHHHHHhCccCCeEEEEecChhh
Confidence 36899999999888888 89999855443
No 232
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=21.27 E-value=27 Score=37.67 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=37.9
Q ss_pred eeeeecCCcchhhhhccccccccccccccccccchh--------HHHHhh-hhhcceeeeeecCCCCCCCCCccEEEecc
Q 027423 94 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDAD--------ARCKSL-VHKGIVRVADIKFPLPYRAKSFPLVIVSD 164 (223)
Q Consensus 94 kVLHVGPdtC~VVs~LLkEeetEAWGVEPydiedad--------~~CKsL-VrKGiVRvADIkfpLPYR~kSFSlVIVSD 164 (223)
|||.||..|++....+|+.-+...-...-|...|.+ ...+.| +.++ .=|+.-|-|+-+.+|.+||+++
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~---~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQG---QWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEE---CCCSSCCCC-----CCEEEEEC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccc---cccccccccCCCCceeEEEEcc
Confidence 899999999988777665432111011235544433 333332 0000 0022223345667899999999
Q ss_pred cccccChhhhccccccchhh-ccCceEEEe
Q 027423 165 ALDYLSPKYLNKTLPDLARV-ASDGVLIFA 193 (223)
Q Consensus 165 aLDyLspryLNkTLPeLaRv-sadglViF~ 193 (223)
.|. - -+.+++||-.+.++ ..+|.+++.
T Consensus 1320 vl~-~-t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1320 ALA-T-LGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp C----------------------CCEEEEE
T ss_pred ccc-c-cccHHHHHHHHHHhcCCCcEEEEE
Confidence 883 2 34577888777654 556655553
No 233
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=20.26 E-value=71 Score=26.74 Aligned_cols=127 Identities=12% Similarity=0.071 Sum_probs=75.4
Q ss_pred hhHHHHHhcc------ccceeeeecCCcchhhhhcccc-ccccccccccc--cccchhHHHHhhhhhcceeeeeecCCCC
Q 027423 81 IPILKKAYGD------SMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLVHKGIVRVADIKFPLP 151 (223)
Q Consensus 81 iP~LkkaYGd------sM~kVLHVGPdtC~VVs~LLkE-eetEAWGVEPy--diedad~~CKsLVrKGiVRvADIkfpLP 151 (223)
+|.|.+-|.. .-.+||-+|=.|=..--.+..+ ...+.|++.-- -+|=+..++..+=-.+-||++|.--..
T Consensus 33 Lp~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~- 111 (200)
T 3fzg_A 33 VATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDV- 111 (200)
T ss_dssp GGGHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHH-
T ss_pred hHhHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccC-
Confidence 4666666654 3558999997765554444433 14466664211 122234444333222368888875443
Q ss_pred CCCCCccEEEecccccccChhhhccccccc-hhhccCceEEEeecCcch------hhccccchhHHHHH
Q 027423 152 YRAKSFPLVIVSDALDYLSPKYLNKTLPDL-ARVASDGVLIFAGISSMF------HLMKFSSDTWTEIH 213 (223)
Q Consensus 152 YR~kSFSlVIVSDaLDyLspryLNkTLPeL-aRvsadglViF~G~P~q~------~L~kfssswW~r~~ 213 (223)
-+.+|++|+.-++|-+| +..-.++=++ .++.+.|++| .+|.++ .+..+-+.||.+.-
T Consensus 112 -~~~~~DvVLa~k~LHlL--~~~~~al~~v~~~L~pggvfI--Sfptksl~Gr~~gm~~~Y~~~~~~~~ 175 (200)
T 3fzg_A 112 -YKGTYDVVFLLKMLPVL--KQQDVNILDFLQLFHTQNFVI--SFPIKSLSGKEKGMEENYQLWFESFT 175 (200)
T ss_dssp -TTSEEEEEEEETCHHHH--HHTTCCHHHHHHTCEEEEEEE--EEECCCCC--CTTCCCCHHHHHHHHT
T ss_pred -CCCCcChhhHhhHHHhh--hhhHHHHHHHHHHhCCCCEEE--EeChHHhcCCCcchhhhHHHHHHHhc
Confidence 35679999999999999 4444444443 4566777655 677433 44456777887654
No 234
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=20.00 E-value=22 Score=23.00 Aligned_cols=21 Identities=33% Similarity=0.403 Sum_probs=15.4
Q ss_pred CCCCchhhhHHHHHHHhhhhhh
Q 027423 29 RSSPLLSVGLVLVGAFLLIGYA 50 (223)
Q Consensus 29 rsspllsi~lv~vgailli~Y~ 50 (223)
|+||..+|+.-++| +|++.-.
T Consensus 3 ~~s~~~sIaagVvg-lll~vii 23 (35)
T 1iij_A 3 RASPVTFIIATVVG-VLLFLIL 23 (35)
T ss_dssp THHHHHHHHHHHHH-HHHHHHH
T ss_pred CCCCCcEeHHHHHH-HHHHHHH
Confidence 56788889999999 6555443
Done!