Query 027424
Match_columns 223
No_of_seqs 186 out of 1302
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 09:44:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027424.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027424hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 6E-76 1.3E-80 530.6 24.0 221 1-221 174-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 1.9E-71 4.2E-76 503.6 23.0 219 1-219 165-386 (386)
3 KOG0053 Cystathionine beta-lya 100.0 1.7E-69 3.8E-74 485.0 21.9 221 1-222 187-408 (409)
4 COG2873 MET17 O-acetylhomoseri 100.0 1.3E-69 2.8E-74 476.4 20.4 221 1-221 172-426 (426)
5 PRK08861 cystathionine gamma-s 100.0 8.3E-68 1.8E-72 480.7 22.9 221 1-221 163-384 (388)
6 PRK09028 cystathionine beta-ly 100.0 1.1E-65 2.4E-70 467.4 22.5 216 1-221 171-388 (394)
7 PRK06702 O-acetylhomoserine am 100.0 2.9E-65 6.3E-70 468.9 23.4 221 1-221 172-425 (432)
8 PRK08114 cystathionine beta-ly 100.0 4.1E-65 8.9E-70 463.2 21.7 216 1-221 172-394 (395)
9 PRK05967 cystathionine beta-ly 100.0 5.6E-65 1.2E-69 462.5 22.1 215 1-222 174-393 (395)
10 PRK08045 cystathionine gamma-s 100.0 2.2E-64 4.7E-69 458.2 24.0 222 1-222 162-384 (386)
11 PRK07812 O-acetylhomoserine am 100.0 1.9E-63 4.2E-68 457.9 23.4 222 1-222 180-433 (436)
12 PLN02509 cystathionine beta-ly 100.0 4.3E-63 9.3E-68 458.1 25.2 223 1-223 242-464 (464)
13 PRK05613 O-acetylhomoserine am 100.0 2.7E-63 5.9E-68 457.1 23.7 220 1-220 180-436 (437)
14 PRK08248 O-acetylhomoserine am 100.0 2.5E-63 5.4E-68 456.9 23.3 222 1-222 174-429 (431)
15 TIGR02080 O_succ_thio_ly O-suc 100.0 8.3E-63 1.8E-67 447.2 24.2 221 1-221 161-382 (382)
16 PRK08574 cystathionine gamma-s 100.0 2E-62 4.4E-67 445.1 24.0 220 1-220 162-384 (385)
17 PRK05939 hypothetical protein; 100.0 2.5E-62 5.4E-67 446.1 23.8 221 1-221 156-397 (397)
18 PRK06176 cystathionine gamma-s 100.0 2.9E-62 6.3E-67 443.4 24.0 221 1-221 159-379 (380)
19 PRK06084 O-acetylhomoserine am 100.0 7E-62 1.5E-66 446.6 23.5 221 1-221 168-423 (425)
20 PRK08776 cystathionine gamma-s 100.0 2.5E-61 5.5E-66 440.5 24.1 221 1-221 170-391 (405)
21 PRK06434 cystathionine gamma-l 100.0 2E-61 4.3E-66 438.2 22.2 212 1-220 173-384 (384)
22 PRK07671 cystathionine beta-ly 100.0 4.3E-61 9.3E-66 435.3 24.2 219 1-219 159-377 (377)
23 PRK08249 cystathionine gamma-s 100.0 4.7E-61 1E-65 437.9 24.2 221 1-222 174-395 (398)
24 PRK08134 O-acetylhomoserine am 100.0 9.5E-61 2.1E-65 439.9 23.7 222 1-222 174-429 (433)
25 PRK05994 O-acetylhomoserine am 100.0 1.5E-60 3.2E-65 438.1 24.5 221 1-221 173-427 (427)
26 PRK07810 O-succinylhomoserine 100.0 1.4E-60 3.1E-65 435.4 24.0 218 1-218 180-402 (403)
27 PRK07504 O-succinylhomoserine 100.0 1.5E-60 3.2E-65 434.5 23.9 222 1-222 175-397 (398)
28 TIGR01329 cysta_beta_ly_E cyst 100.0 3.2E-60 6.8E-65 429.7 23.6 222 1-222 156-377 (378)
29 TIGR01325 O_suc_HS_sulf O-succ 100.0 9.6E-60 2.1E-64 426.7 23.2 217 1-218 164-380 (380)
30 PRK08133 O-succinylhomoserine 100.0 1.1E-59 2.4E-64 427.7 23.8 219 1-220 171-390 (390)
31 PRK07049 methionine gamma-lyas 100.0 5.2E-59 1.1E-63 427.9 24.2 216 5-221 209-427 (427)
32 TIGR01324 cysta_beta_ly_B cyst 100.0 9.1E-59 2E-63 420.2 24.5 215 1-221 160-377 (377)
33 TIGR01328 met_gam_lyase methio 100.0 1.1E-58 2.4E-63 421.3 23.9 219 1-220 169-390 (391)
34 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 1E-58 2.2E-63 424.9 23.4 219 1-219 167-418 (418)
35 PRK07811 cystathionine gamma-s 100.0 1.5E-58 3.3E-63 420.0 23.8 217 1-220 171-388 (388)
36 cd00614 CGS_like CGS_like: Cys 100.0 6.9E-58 1.5E-62 412.7 23.1 219 1-219 150-369 (369)
37 PRK06460 hypothetical protein; 100.0 1.3E-57 2.8E-62 412.4 24.9 220 1-221 155-375 (376)
38 PRK06234 methionine gamma-lyas 100.0 3.2E-57 6.9E-62 412.8 23.5 220 1-221 174-398 (400)
39 PRK08064 cystathionine beta-ly 100.0 4.2E-57 9E-62 410.9 23.7 221 1-221 163-383 (390)
40 PRK07503 methionine gamma-lyas 100.0 5.6E-57 1.2E-61 411.6 23.8 220 1-221 175-397 (403)
41 PRK07269 cystathionine gamma-s 100.0 2.6E-56 5.7E-61 402.4 21.6 203 1-219 161-363 (364)
42 PRK07050 cystathionine beta-ly 100.0 1.6E-55 3.5E-60 401.0 21.2 215 1-221 175-392 (394)
43 PRK06767 methionine gamma-lyas 100.0 5.6E-55 1.2E-59 396.2 23.7 214 1-220 171-385 (386)
44 PRK07582 cystathionine gamma-l 100.0 1.4E-54 3.1E-59 391.2 23.1 209 1-220 157-365 (366)
45 PLN02242 methionine gamma-lyas 100.0 1.8E-53 3.9E-58 390.2 22.7 219 1-223 188-418 (418)
46 PRK05968 hypothetical protein; 100.0 1.5E-51 3.3E-56 374.3 22.3 215 1-222 172-388 (389)
47 PRK08247 cystathionine gamma-s 100.0 1.2E-48 2.6E-53 352.4 21.6 205 1-221 161-365 (366)
48 TIGR00474 selA seryl-tRNA(sec) 99.7 3.6E-17 7.9E-22 151.6 7.4 105 1-108 240-371 (454)
49 PRK04311 selenocysteine syntha 99.6 2.3E-15 5E-20 140.0 5.7 105 1-109 245-377 (464)
50 PF01276 OKR_DC_1: Orn/Lys/Arg 99.3 3.6E-12 7.9E-17 116.7 8.5 100 1-105 192-314 (417)
51 PLN03227 serine palmitoyltrans 99.2 3.1E-10 6.6E-15 103.6 15.3 185 1-220 163-382 (392)
52 COG0112 GlyA Glycine/serine hy 99.2 3.8E-10 8.1E-15 101.4 14.3 185 1-220 189-390 (413)
53 PRK15029 arginine decarboxylas 99.2 4.4E-11 9.6E-16 116.6 8.3 104 1-109 336-465 (755)
54 PLN02721 threonine aldolase 99.1 1.8E-09 3.9E-14 95.7 13.7 173 1-220 166-352 (353)
55 PRK13578 ornithine decarboxyla 99.1 2.1E-10 4.6E-15 111.2 7.9 104 2-111 308-442 (720)
56 PRK13034 serine hydroxymethylt 99.1 6.1E-09 1.3E-13 95.8 17.3 103 1-108 191-305 (416)
57 TIGR03576 pyridox_MJ0158 pyrid 99.1 3.4E-09 7.4E-14 95.3 15.0 167 2-218 164-345 (346)
58 cd00609 AAT_like Aspartate ami 99.0 6.8E-09 1.5E-13 90.9 14.9 110 1-111 160-281 (350)
59 PLN02271 serine hydroxymethylt 99.0 3.8E-09 8.2E-14 99.7 12.4 188 1-219 321-539 (586)
60 cd00616 AHBA_syn 3-amino-5-hyd 99.0 6.8E-09 1.5E-13 92.0 13.5 196 1-219 128-352 (352)
61 PLN03226 serine hydroxymethylt 99.0 9.1E-09 2E-13 96.3 14.3 187 1-219 206-418 (475)
62 PF00464 SHMT: Serine hydroxym 99.0 2.1E-08 4.6E-13 91.7 15.6 146 1-168 192-366 (399)
63 PTZ00094 serine hydroxymethylt 99.0 2.1E-08 4.6E-13 93.1 15.7 179 1-220 205-408 (452)
64 PRK07179 hypothetical protein; 99.0 2.1E-08 4.6E-13 91.5 14.9 174 1-222 206-400 (407)
65 TIGR01979 sufS cysteine desulf 98.9 5.2E-08 1.1E-12 88.4 15.8 187 1-220 184-401 (403)
66 cd06452 SepCysS Sep-tRNA:Cys-t 98.9 4.3E-08 9.3E-13 87.9 14.8 111 1-115 164-286 (361)
67 cd00378 SHMT Serine-glycine hy 98.9 1.3E-07 2.8E-12 85.8 17.6 180 1-221 184-386 (402)
68 PRK13580 serine hydroxymethylt 98.9 4.9E-08 1.1E-12 91.3 15.0 178 1-220 243-445 (493)
69 PRK05957 aspartate aminotransf 98.9 6.1E-08 1.3E-12 88.0 14.8 109 1-111 188-309 (389)
70 PRK05764 aspartate aminotransf 98.9 2E-07 4.3E-12 84.3 17.6 109 1-111 192-314 (393)
71 PRK10874 cysteine sulfinate de 98.9 9.7E-08 2.1E-12 86.7 15.6 181 1-220 185-398 (401)
72 cd06453 SufS_like Cysteine des 98.9 7.3E-08 1.6E-12 86.3 14.5 138 1-157 164-330 (373)
73 PRK07324 transaminase; Validat 98.8 1.1E-07 2.5E-12 85.9 14.9 114 1-117 181-303 (373)
74 cd06502 TA_like Low-specificit 98.8 5.3E-08 1.1E-12 85.8 12.1 171 1-219 154-336 (338)
75 PRK00011 glyA serine hydroxyme 98.8 1.5E-07 3.3E-12 85.9 15.3 104 1-109 188-303 (416)
76 TIGR01822 2am3keto_CoA 2-amino 98.8 2E-07 4.3E-12 84.2 15.9 104 1-108 195-312 (393)
77 PRK05958 8-amino-7-oxononanoat 98.8 3.1E-07 6.6E-12 82.3 16.9 132 1-156 193-339 (385)
78 COG0520 csdA Selenocysteine ly 98.8 3.7E-07 8.1E-12 83.9 17.7 184 1-219 187-400 (405)
79 cd00615 Orn_deC_like Ornithine 98.8 7.4E-09 1.6E-13 90.7 6.2 101 1-106 178-293 (294)
80 PRK06939 2-amino-3-ketobutyrat 98.8 2.6E-07 5.6E-12 83.2 16.2 104 1-108 199-316 (397)
81 cd06454 KBL_like KBL_like; thi 98.8 2.9E-07 6.3E-12 81.3 16.3 103 1-108 157-273 (349)
82 TIGR02539 SepCysS Sep-tRNA:Cys 98.8 3.4E-07 7.4E-12 82.6 15.9 106 1-109 171-288 (370)
83 TIGR01821 5aminolev_synth 5-am 98.8 4.3E-07 9.4E-12 82.6 16.1 174 1-221 202-397 (402)
84 TIGR03392 FeS_syn_CsdA cystein 98.7 3.7E-07 8E-12 82.8 14.9 182 1-221 182-396 (398)
85 PLN02483 serine palmitoyltrans 98.7 5.6E-07 1.2E-11 84.6 16.5 103 1-108 265-388 (489)
86 PRK06108 aspartate aminotransf 98.7 2.9E-07 6.4E-12 82.7 14.0 109 1-111 186-308 (382)
87 TIGR00858 bioF 8-amino-7-oxono 98.7 8.5E-07 1.8E-11 78.5 16.6 132 1-156 171-317 (360)
88 PLN02855 Bifunctional selenocy 98.7 3.6E-07 7.8E-12 83.8 14.5 188 1-219 198-417 (424)
89 TIGR03588 PseC UDP-4-keto-6-de 98.7 5.3E-07 1.2E-11 81.5 15.2 108 1-111 143-281 (380)
90 PRK15399 lysine decarboxylase 98.7 4.4E-08 9.5E-13 95.2 8.5 102 3-109 320-443 (713)
91 TIGR01140 L_thr_O3P_dcar L-thr 98.7 6.4E-07 1.4E-11 79.6 15.0 107 1-111 153-267 (330)
92 PRK13392 5-aminolevulinate syn 98.7 6.6E-07 1.4E-11 81.7 14.8 177 1-221 203-398 (410)
93 PLN02651 cysteine desulfurase 98.7 4.3E-07 9.3E-12 81.6 13.4 180 1-207 163-359 (364)
94 TIGR03537 DapC succinyldiamino 98.7 1.1E-06 2.3E-11 78.6 15.6 106 1-108 164-278 (350)
95 TIGR03402 FeS_nifS cysteine de 98.7 3.9E-07 8.5E-12 82.1 12.7 193 1-220 161-372 (379)
96 PRK08056 threonine-phosphate d 98.7 1.1E-06 2.4E-11 78.8 15.5 173 1-219 170-354 (356)
97 PRK06358 threonine-phosphate d 98.6 1.4E-06 3E-11 78.2 15.9 170 2-218 170-353 (354)
98 PRK13393 5-aminolevulinate syn 98.6 1.3E-06 2.8E-11 79.7 15.7 174 1-221 202-397 (406)
99 TIGR01977 am_tr_V_EF2568 cyste 98.6 8.2E-07 1.8E-11 79.6 14.1 188 1-220 162-375 (376)
100 TIGR03531 selenium_SpcS O-phos 98.6 2.2E-07 4.8E-12 86.3 10.4 104 1-108 230-344 (444)
101 TIGR03403 nifS_epsilon cystein 98.6 1.5E-06 3.3E-11 78.4 15.7 190 1-219 165-374 (382)
102 PRK15400 lysine decarboxylase 98.6 5.7E-08 1.2E-12 94.4 6.7 101 2-109 322-443 (714)
103 TIGR01825 gly_Cac_T_rel pyrido 98.6 2.4E-06 5.2E-11 76.9 16.6 103 1-108 188-304 (385)
104 PRK07568 aspartate aminotransf 98.6 9.8E-07 2.1E-11 79.9 14.1 114 1-117 190-316 (397)
105 PRK06207 aspartate aminotransf 98.6 2E-06 4.3E-11 78.7 15.8 109 1-111 206-327 (405)
106 PRK09295 bifunctional cysteine 98.6 3E-06 6.4E-11 77.3 16.7 180 1-218 189-398 (406)
107 PRK09064 5-aminolevulinate syn 98.6 2.1E-06 4.5E-11 78.3 15.6 174 1-221 203-398 (407)
108 PRK06348 aspartate aminotransf 98.6 4.3E-06 9.3E-11 75.7 17.2 109 1-111 190-310 (384)
109 PRK06290 aspartate aminotransf 98.6 3.3E-06 7.1E-11 77.6 16.0 173 1-222 207-407 (410)
110 PRK07337 aminotransferase; Val 98.5 4.4E-06 9.6E-11 75.6 16.5 107 1-109 191-307 (388)
111 TIGR03540 DapC_direct LL-diami 98.5 2.9E-06 6.4E-11 76.6 15.3 106 1-108 192-310 (383)
112 PRK09331 Sep-tRNA:Cys-tRNA syn 98.5 3.3E-07 7.1E-12 83.3 8.5 109 1-112 183-303 (387)
113 PRK00854 rocD ornithine--oxo-a 98.5 1.3E-06 2.9E-11 79.3 12.4 171 1-219 216-400 (401)
114 TIGR01814 kynureninase kynuren 98.5 3.5E-06 7.6E-11 76.9 15.0 42 1-42 196-238 (406)
115 PRK06225 aspartate aminotransf 98.5 3.3E-06 7.1E-11 76.3 14.6 182 1-221 185-377 (380)
116 PRK06107 aspartate aminotransf 98.5 5.7E-06 1.2E-10 75.5 16.0 108 2-111 195-317 (402)
117 TIGR01976 am_tr_V_VC1184 cyste 98.5 5E-06 1.1E-10 75.2 15.3 56 1-61 181-237 (397)
118 PRK09276 LL-diaminopimelate am 98.5 7.6E-06 1.6E-10 73.9 16.5 106 1-108 194-312 (385)
119 PRK08960 hypothetical protein; 98.5 8E-06 1.7E-10 74.0 16.7 107 1-109 193-309 (387)
120 TIGR03539 DapC_actino succinyl 98.5 7.5E-06 1.6E-10 73.4 16.0 107 1-109 170-290 (357)
121 PRK07681 aspartate aminotransf 98.5 4.4E-06 9.5E-11 76.0 14.7 113 1-117 194-319 (399)
122 COG1921 SelA Selenocysteine sy 98.5 1.9E-07 4.1E-12 84.7 5.3 85 1-89 182-271 (395)
123 TIGR01265 tyr_nico_aTase tyros 98.5 1.1E-05 2.4E-10 73.6 16.9 115 1-117 197-329 (403)
124 PRK11706 TDP-4-oxo-6-deoxy-D-g 98.5 7.6E-06 1.7E-10 74.1 15.5 107 1-110 141-272 (375)
125 PRK14012 cysteine desulfurase; 98.5 4.4E-06 9.5E-11 76.2 14.0 190 1-220 169-379 (404)
126 cd06451 AGAT_like Alanine-glyo 98.5 4.6E-06 9.9E-11 74.3 13.7 105 1-108 149-278 (356)
127 TIGR01141 hisC histidinol-phos 98.4 2.5E-06 5.3E-11 75.8 11.9 117 5-144 173-298 (346)
128 PRK02948 cysteine desulfurase; 98.4 5.8E-06 1.2E-10 74.5 14.3 193 1-219 163-373 (381)
129 PRK07682 hypothetical protein; 98.4 5.6E-06 1.2E-10 74.6 13.9 106 1-108 182-299 (378)
130 PRK07865 N-succinyldiaminopime 98.4 3.6E-05 7.7E-10 69.1 18.4 106 1-108 176-295 (364)
131 PRK07550 hypothetical protein; 98.4 8.1E-06 1.8E-10 73.8 14.3 109 1-111 191-312 (386)
132 PRK09148 aminotransferase; Val 98.4 2.1E-05 4.5E-10 71.9 17.0 107 1-109 193-312 (405)
133 PRK07777 aminotransferase; Val 98.4 1.9E-05 4.1E-10 71.5 16.5 106 1-108 187-305 (387)
134 PRK08361 aspartate aminotransf 98.4 1.1E-05 2.4E-10 73.1 14.9 114 1-117 194-320 (391)
135 TIGR03301 PhnW-AepZ 2-aminoeth 98.4 9.5E-06 2.1E-10 71.7 14.1 106 1-109 150-279 (355)
136 COG0436 Aspartate/tyrosine/aro 98.4 2E-05 4.3E-10 72.2 16.6 169 1-213 191-381 (393)
137 cd06450 DOPA_deC_like DOPA dec 98.4 3E-06 6.5E-11 74.9 10.8 106 1-145 173-287 (345)
138 TIGR02326 transamin_PhnW 2-ami 98.4 8.1E-06 1.8E-10 73.1 13.6 106 1-109 154-284 (363)
139 PRK12414 putative aminotransfe 98.4 2.5E-05 5.4E-10 70.8 16.8 107 1-109 190-308 (384)
140 TIGR02006 IscS cysteine desulf 98.4 1.4E-05 3E-10 72.9 15.2 190 1-219 167-376 (402)
141 PRK09147 succinyldiaminopimela 98.4 2.5E-05 5.4E-10 70.9 16.9 106 1-108 194-317 (396)
142 COG0156 BioF 7-keto-8-aminopel 98.4 1.7E-05 3.7E-10 72.5 15.5 173 1-220 196-386 (388)
143 PRK08363 alanine aminotransfer 98.4 2.7E-05 5.9E-10 70.8 17.0 111 1-111 194-318 (398)
144 TIGR01437 selA_rel uncharacter 98.4 2E-06 4.3E-11 77.8 9.1 110 1-115 174-289 (363)
145 PRK07309 aromatic amino acid a 98.4 2.5E-05 5.5E-10 70.9 16.4 107 1-109 194-311 (391)
146 PRK08068 transaminase; Reviewe 98.4 9.1E-06 2E-10 73.6 13.4 107 1-109 195-314 (389)
147 PRK15481 transcriptional regul 98.4 2.6E-05 5.7E-10 71.7 16.6 105 1-108 240-356 (431)
148 PLN00145 tyrosine/nicotianamin 98.4 2.8E-05 6.1E-10 71.9 16.7 116 1-117 218-352 (430)
149 PF00266 Aminotran_5: Aminotra 98.4 2.9E-05 6.2E-10 69.8 16.5 175 1-210 164-368 (371)
150 PLN02187 rooty/superroot1 98.3 2.5E-05 5.4E-10 72.9 16.2 111 1-111 232-360 (462)
151 PRK08175 aminotransferase; Val 98.3 3.5E-05 7.7E-10 70.0 16.3 107 1-109 192-311 (395)
152 TIGR01264 tyr_amTase_E tyrosin 98.3 3.1E-05 6.6E-10 70.5 15.9 115 1-117 196-327 (401)
153 PLN02656 tyrosine transaminase 98.3 3.9E-05 8.5E-10 70.2 16.7 110 1-111 197-325 (409)
154 COG1982 LdcC Arginine/lysine/o 98.3 1.3E-06 2.7E-11 82.5 6.8 193 2-220 191-404 (557)
155 PRK09265 aminotransferase AlaT 98.3 2.4E-05 5.1E-10 71.4 14.9 115 1-117 196-328 (404)
156 PRK13520 L-tyrosine decarboxyl 98.3 2.9E-05 6.4E-10 69.3 14.7 170 1-219 176-370 (371)
157 PRK04781 histidinol-phosphate 98.3 5.8E-05 1.2E-09 68.1 16.6 169 5-219 183-362 (364)
158 PRK05942 aspartate aminotransf 98.3 7.4E-05 1.6E-09 67.9 17.5 106 1-108 198-316 (394)
159 PRK00950 histidinol-phosphate 98.3 6E-06 1.3E-10 73.7 9.8 81 1-85 183-267 (361)
160 PRK14807 histidinol-phosphate 98.2 3.6E-05 7.8E-10 68.9 14.6 106 2-111 174-285 (351)
161 TIGR03812 tyr_de_CO2_Arch tyro 98.2 6.5E-05 1.4E-09 67.2 16.1 108 1-110 178-309 (373)
162 PRK02731 histidinol-phosphate 98.2 9.6E-06 2.1E-10 72.6 10.7 170 5-220 185-366 (367)
163 PF00155 Aminotran_1_2: Aminot 98.2 3.7E-05 7.9E-10 68.5 14.3 103 2-108 177-295 (363)
164 PTZ00433 tyrosine aminotransfe 98.2 5.7E-05 1.2E-09 69.2 15.7 110 1-111 205-331 (412)
165 PRK06425 histidinol-phosphate 98.2 2.3E-05 5.1E-10 69.6 12.7 104 2-109 151-263 (332)
166 PRK03244 argD acetylornithine 98.2 2E-05 4.3E-10 71.6 12.3 168 1-220 212-394 (398)
167 PRK07908 hypothetical protein; 98.2 0.00016 3.4E-09 64.5 17.9 171 5-221 167-348 (349)
168 PLN00175 aminotransferase fami 98.2 0.00014 3.1E-09 66.8 17.7 107 1-109 215-333 (413)
169 PRK13355 bifunctional HTH-doma 98.2 9.1E-05 2E-09 70.0 16.7 110 1-111 309-436 (517)
170 TIGR03538 DapC_gpp succinyldia 98.2 0.00012 2.7E-09 66.4 16.8 106 1-108 193-316 (393)
171 TIGR03235 DNA_S_dndA cysteine 98.2 3.5E-05 7.7E-10 68.7 13.0 172 1-202 163-353 (353)
172 PRK07683 aminotransferase A; V 98.2 0.00013 2.8E-09 66.2 16.8 106 1-108 189-306 (387)
173 PTZ00377 alanine aminotransfer 98.2 0.0002 4.3E-09 67.1 18.4 115 1-117 246-393 (481)
174 PRK08912 hypothetical protein; 98.2 9.1E-05 2E-09 67.0 15.6 107 1-109 187-306 (387)
175 PRK02610 histidinol-phosphate 98.2 4.5E-05 9.8E-10 68.9 13.3 103 5-111 198-307 (374)
176 PRK13479 2-aminoethylphosphona 98.1 4.6E-05 9.9E-10 68.3 13.1 106 1-109 156-285 (368)
177 PRK05839 hypothetical protein; 98.1 8.5E-05 1.8E-09 67.2 14.9 66 2-69 184-262 (374)
178 PRK05387 histidinol-phosphate 98.1 6.9E-05 1.5E-09 66.7 14.1 101 6-109 175-284 (353)
179 PRK07366 succinyldiaminopimela 98.1 0.00015 3.2E-09 65.7 16.4 106 1-108 193-312 (388)
180 PLN02880 tyrosine decarboxylas 98.1 4.3E-05 9.2E-10 72.0 13.2 124 1-143 264-417 (490)
181 PF01041 DegT_DnrJ_EryC1: DegT 98.1 1E-05 2.3E-10 72.9 8.8 114 1-117 135-269 (363)
182 PLN00143 tyrosine/nicotianamin 98.1 0.00017 3.8E-09 66.0 16.7 109 1-110 198-325 (409)
183 cd00610 OAT_like Acetyl ornith 98.1 4.3E-05 9.3E-10 69.3 12.6 124 1-144 220-354 (413)
184 PRK13237 tyrosine phenol-lyase 98.1 2.5E-05 5.4E-10 72.7 11.0 106 1-109 206-336 (460)
185 KOG2467 Glycine/serine hydroxy 98.1 6.4E-05 1.4E-09 67.7 13.1 182 1-219 212-425 (477)
186 PRK09082 methionine aminotrans 98.1 0.00013 2.8E-09 66.1 15.5 106 1-108 191-309 (386)
187 PTZ00376 aspartate aminotransf 98.1 7.9E-05 1.7E-09 68.0 14.0 170 1-219 204-402 (404)
188 PLN02409 serine--glyoxylate am 98.1 0.00018 3.9E-09 65.8 16.4 104 2-108 165-292 (401)
189 PLN02822 serine palmitoyltrans 98.1 9.2E-05 2E-09 69.6 14.7 105 1-110 270-389 (481)
190 TIGR02379 ECA_wecE TDP-4-keto- 98.1 9.6E-05 2.1E-09 67.2 14.4 106 1-109 141-272 (376)
191 PRK05664 threonine-phosphate d 98.1 0.0003 6.4E-09 62.5 17.3 103 2-108 153-262 (330)
192 cd00613 GDC-P Glycine cleavage 98.1 6.9E-05 1.5E-09 67.7 13.2 58 1-59 184-244 (398)
193 PRK08636 aspartate aminotransf 98.1 0.00038 8.3E-09 63.5 18.1 106 1-108 203-321 (403)
194 PRK04870 histidinol-phosphate 98.1 0.00014 3E-09 65.0 14.5 101 5-111 182-290 (356)
195 PF03841 SelA: L-seryl-tRNA se 98.1 6.9E-06 1.5E-10 74.1 5.9 105 1-109 165-297 (367)
196 PRK11658 UDP-4-amino-4-deoxy-L 98.1 4.3E-05 9.4E-10 69.4 11.2 106 1-110 143-276 (379)
197 PRK04366 glycine dehydrogenase 98.0 0.00014 3.1E-09 68.2 14.8 54 1-54 233-291 (481)
198 TIGR02618 tyr_phenol_ly tyrosi 98.0 3.7E-05 8E-10 71.4 10.1 105 1-108 199-328 (450)
199 COG1168 MalY Bifunctional PLP- 98.0 0.00023 4.9E-09 64.3 14.7 178 1-220 186-386 (388)
200 PRK04612 argD acetylornithine 98.0 6E-05 1.3E-09 69.3 11.5 171 1-220 216-403 (408)
201 PLN02955 8-amino-7-oxononanoat 98.0 0.00019 4.1E-09 67.3 14.8 166 1-219 274-460 (476)
202 TIGR01885 Orn_aminotrans ornit 98.0 7.7E-05 1.7E-09 68.0 12.0 169 1-219 215-401 (401)
203 PRK03080 phosphoserine aminotr 98.0 0.00022 4.8E-09 64.7 14.8 175 3-220 161-373 (378)
204 PRK04073 rocD ornithine--oxo-a 98.0 9.7E-05 2.1E-09 67.3 12.5 168 1-218 215-395 (396)
205 PRK09105 putative aminotransfe 98.0 0.00021 4.5E-09 64.7 14.5 99 4-108 195-302 (370)
206 PRK06836 aspartate aminotransf 98.0 0.00016 3.4E-09 65.8 13.7 102 5-109 206-320 (394)
207 PRK15407 lipopolysaccharide bi 98.0 5.8E-05 1.2E-09 70.1 10.8 107 1-110 181-330 (438)
208 PRK09440 avtA valine--pyruvate 98.0 0.00013 2.9E-09 66.5 12.9 105 1-108 207-324 (416)
209 PRK10534 L-threonine aldolase; 98.0 6.6E-05 1.4E-09 66.3 10.4 104 2-109 156-267 (333)
210 PRK01688 histidinol-phosphate 98.0 7.9E-05 1.7E-09 66.8 10.9 107 6-117 177-293 (351)
211 PRK08153 histidinol-phosphate 98.0 0.00018 3.9E-09 64.9 13.2 171 5-221 186-366 (369)
212 COG2008 GLY1 Threonine aldolas 97.9 0.00012 2.6E-09 65.5 11.4 110 1-117 158-279 (342)
213 PRK02936 argD acetylornithine 97.9 0.00016 3.4E-09 65.2 12.3 121 1-145 196-329 (377)
214 PRK03158 histidinol-phosphate 97.9 0.00019 4E-09 64.2 12.5 100 5-108 182-292 (359)
215 PRK07505 hypothetical protein; 97.9 0.00044 9.4E-09 63.1 14.9 81 1-85 204-297 (402)
216 TIGR01788 Glu-decarb-GAD gluta 97.9 0.0004 8.7E-09 64.5 14.8 184 1-222 211-431 (431)
217 PRK04635 histidinol-phosphate 97.9 0.00018 4E-09 64.4 12.2 102 6-111 178-289 (354)
218 PLN02397 aspartate transaminas 97.9 0.00048 1E-08 63.5 15.2 170 1-221 222-422 (423)
219 PTZ00125 ornithine aminotransf 97.9 0.00021 4.6E-09 64.7 12.0 171 1-221 207-396 (400)
220 PRK08354 putative aminotransfe 97.8 0.00059 1.3E-08 60.0 14.1 51 1-51 145-196 (311)
221 PRK05937 8-amino-7-oxononanoat 97.8 0.00071 1.5E-08 61.1 14.3 101 1-106 168-278 (370)
222 PRK06959 putative threonine-ph 97.8 0.0011 2.3E-08 59.4 15.3 102 3-108 160-268 (339)
223 PRK06173 adenosylmethionine--8 97.8 0.00015 3.2E-09 67.2 10.0 169 1-220 236-425 (429)
224 PRK14808 histidinol-phosphate 97.8 0.00055 1.2E-08 61.1 13.3 102 4-109 165-273 (335)
225 PLN02231 alanine transaminase 97.8 0.0034 7.4E-08 59.9 19.3 116 1-117 299-445 (534)
226 PRK05964 adenosylmethionine--8 97.8 0.00021 4.5E-09 65.9 10.8 172 1-220 229-422 (423)
227 PLN00144 acetylornithine trans 97.8 0.00053 1.1E-08 62.5 13.3 168 1-220 196-380 (382)
228 PRK07392 threonine-phosphate d 97.8 0.00093 2E-08 59.9 14.7 105 2-111 174-289 (360)
229 TIGR03246 arg_catab_astC succi 97.8 0.00026 5.5E-09 64.7 11.3 173 1-220 208-395 (397)
230 cd00617 Tnase_like Tryptophana 97.8 0.00033 7.1E-09 65.1 12.1 106 1-109 181-311 (431)
231 PRK01278 argD acetylornithine 97.8 0.00042 9.2E-09 62.8 12.5 103 1-107 204-313 (389)
232 TIGR00707 argD acetylornithine 97.8 0.00028 6E-09 63.3 10.9 102 1-108 199-309 (379)
233 PRK02627 acetylornithine amino 97.8 0.00035 7.6E-09 63.1 11.6 100 1-106 211-319 (396)
234 PRK14809 histidinol-phosphate 97.7 0.001 2.2E-08 59.6 14.3 75 6-84 186-265 (357)
235 PLN03026 histidinol-phosphate 97.7 0.00057 1.2E-08 62.0 12.8 101 7-111 205-313 (380)
236 PRK08088 4-aminobutyrate amino 97.7 0.00071 1.5E-08 62.4 13.5 174 1-221 228-424 (425)
237 PRK06918 4-aminobutyrate amino 97.7 0.00057 1.2E-08 63.6 12.9 82 1-87 248-335 (451)
238 PRK05166 histidinol-phosphate 97.7 0.00087 1.9E-08 60.4 13.7 102 5-109 190-303 (371)
239 TIGR00700 GABAtrnsam 4-aminobu 97.7 0.00064 1.4E-08 62.6 12.9 120 1-143 226-357 (420)
240 PRK06855 aminotransferase; Val 97.7 0.0023 4.9E-08 59.2 16.6 110 1-111 199-328 (433)
241 PRK03317 histidinol-phosphate 97.7 0.0012 2.5E-08 59.4 14.3 104 2-109 186-299 (368)
242 PRK01533 histidinol-phosphate 97.7 0.0005 1.1E-08 62.1 11.9 163 2-219 180-354 (366)
243 TIGR01366 serC_3 phosphoserine 97.7 0.003 6.5E-08 57.1 16.9 106 1-111 150-283 (361)
244 TIGR03542 DAPAT_plant LL-diami 97.7 0.0015 3.3E-08 59.5 15.1 107 1-109 201-329 (402)
245 PLN02590 probable tyrosine dec 97.7 0.0011 2.3E-08 63.3 14.4 176 1-219 312-531 (539)
246 PRK11522 putrescine--2-oxoglut 97.7 0.00044 9.5E-09 64.7 11.6 170 1-221 260-452 (459)
247 PRK12381 bifunctional succinyl 97.7 0.0005 1.1E-08 62.9 11.7 173 1-220 212-399 (406)
248 PRK05093 argD bifunctional N-s 97.7 0.00059 1.3E-08 62.3 12.1 138 1-156 213-359 (403)
249 PRK13238 tnaA tryptophanase/L- 97.7 0.0017 3.7E-08 60.8 15.1 105 1-108 206-335 (460)
250 PLN02450 1-aminocyclopropane-1 97.7 0.0034 7.3E-08 58.8 17.0 104 2-108 220-347 (468)
251 TIGR00508 bioA adenosylmethion 97.7 0.00045 9.8E-09 63.9 11.0 134 1-154 237-384 (427)
252 PRK09257 aromatic amino acid a 97.7 0.0018 3.9E-08 58.9 14.8 108 1-108 200-332 (396)
253 PRK03321 putative aminotransfe 97.7 0.00073 1.6E-08 60.2 11.9 163 5-219 176-350 (352)
254 TIGR03372 putres_am_tran putre 97.6 0.0016 3.6E-08 60.6 14.4 131 1-156 253-401 (442)
255 PRK07986 adenosylmethionine--8 97.6 0.00037 8.1E-09 64.6 10.1 166 1-220 234-423 (428)
256 cd00611 PSAT_like Phosphoserin 97.6 0.0051 1.1E-07 55.3 17.2 126 1-146 158-303 (355)
257 PRK09264 diaminobutyrate--2-ox 97.6 0.00047 1E-08 63.7 10.7 175 1-220 227-416 (425)
258 COG0079 HisC Histidinol-phosph 97.6 0.0026 5.6E-08 57.7 15.2 166 6-219 177-353 (356)
259 PLN02624 ornithine-delta-amino 97.6 0.0014 2.9E-08 61.6 13.5 167 1-219 253-443 (474)
260 PF06838 Met_gamma_lyase: Meth 97.6 0.0025 5.5E-08 57.7 14.4 138 5-159 189-333 (403)
261 PLN02376 1-aminocyclopropane-1 97.6 0.0041 8.9E-08 58.7 16.7 105 1-108 227-354 (496)
262 TIGR01364 serC_1 phosphoserine 97.6 0.0042 9.2E-08 56.0 16.1 127 1-146 150-295 (349)
263 PRK05367 glycine dehydrogenase 97.6 0.0038 8.3E-08 63.3 16.9 114 1-118 665-800 (954)
264 PRK07590 L,L-diaminopimelate a 97.6 0.0088 1.9E-07 54.6 17.9 107 1-109 204-336 (409)
265 TIGR02407 ectoine_ectB diamino 97.5 0.0012 2.6E-08 60.8 12.1 131 1-156 223-369 (412)
266 PLN02724 Molybdenum cofactor s 97.5 0.011 2.3E-07 59.1 19.4 48 6-55 230-278 (805)
267 PRK13360 omega amino acid--pyr 97.5 0.0033 7.2E-08 58.5 14.8 171 1-221 244-441 (442)
268 PRK08117 4-aminobutyrate amino 97.5 0.0011 2.4E-08 61.3 11.6 175 1-220 236-429 (433)
269 PRK06777 4-aminobutyrate amino 97.5 0.0012 2.5E-08 61.0 11.6 119 1-143 227-358 (421)
270 PRK06058 4-aminobutyrate amino 97.5 0.0012 2.6E-08 61.4 11.7 119 1-143 248-379 (443)
271 TIGR03799 NOD_PanD_pyr putativ 97.5 0.00065 1.4E-08 64.6 9.9 114 1-117 290-428 (522)
272 PLN02607 1-aminocyclopropane-1 97.5 0.0056 1.2E-07 57.0 15.9 105 1-108 228-354 (447)
273 PRK06082 4-aminobutyrate amino 97.5 0.0021 4.6E-08 60.1 12.5 122 1-144 257-390 (459)
274 PRK05630 adenosylmethionine--8 97.4 0.00075 1.6E-08 62.4 9.2 122 1-145 230-369 (422)
275 PLN02672 methionine S-methyltr 97.4 0.0078 1.7E-07 61.6 16.8 108 1-109 857-990 (1082)
276 PRK07678 aminotransferase; Val 97.4 0.0056 1.2E-07 57.1 14.4 178 1-221 242-450 (451)
277 PRK00451 glycine dehydrogenase 97.4 0.0026 5.7E-08 58.7 12.1 50 1-54 228-284 (447)
278 PRK09792 4-aminobutyrate trans 97.4 0.0021 4.6E-08 59.3 11.4 82 1-87 227-314 (421)
279 PRK02769 histidine decarboxyla 97.4 0.0028 6.1E-08 57.9 12.0 113 1-118 185-320 (380)
280 PRK03967 histidinol-phosphate 97.3 0.0033 7.2E-08 56.0 11.9 101 4-108 167-274 (337)
281 PRK08360 4-aminobutyrate amino 97.3 0.0017 3.6E-08 60.5 10.0 119 1-143 233-364 (443)
282 PLN02414 glycine dehydrogenase 97.3 0.0022 4.7E-08 65.1 11.4 54 1-54 691-749 (993)
283 PRK05355 3-phosphoserine/phosp 97.3 0.012 2.6E-07 53.3 14.9 169 5-219 165-357 (360)
284 PRK05965 hypothetical protein; 97.3 0.0058 1.3E-07 57.1 13.2 121 1-143 244-382 (459)
285 PRK05769 4-aminobutyrate amino 97.3 0.0033 7.2E-08 58.5 11.5 116 1-143 250-379 (441)
286 PRK05367 glycine dehydrogenase 97.3 0.0045 9.7E-08 62.8 13.1 52 1-55 230-287 (954)
287 PLN02760 4-aminobutyrate:pyruv 97.3 0.0038 8.2E-08 59.1 12.0 122 1-144 289-428 (504)
288 PRK04260 acetylornithine amino 97.3 0.0072 1.6E-07 54.5 13.3 119 1-143 194-325 (375)
289 COG0075 Serine-pyruvate aminot 97.3 0.0083 1.8E-07 54.9 13.5 107 1-109 156-285 (383)
290 COG1104 NifS Cysteine sulfinat 97.3 0.0074 1.6E-07 55.1 13.2 193 1-220 166-377 (386)
291 TIGR00461 gcvP glycine dehydro 97.2 0.003 6.4E-08 63.7 11.5 154 1-158 653-863 (939)
292 COG1167 ARO8 Transcriptional r 97.2 0.017 3.8E-07 54.0 15.9 113 1-117 255-383 (459)
293 PF01212 Beta_elim_lyase: Beta 97.2 3.8E-05 8.1E-10 67.7 -2.0 111 1-117 153-277 (290)
294 TIGR00709 dat 2,4-diaminobutyr 97.2 0.0048 1E-07 57.4 11.6 117 1-143 235-365 (442)
295 COG0076 GadB Glutamate decarbo 97.2 0.0046 9.9E-08 58.0 11.5 124 1-143 232-379 (460)
296 COG0399 WecE Predicted pyridox 97.2 0.0045 9.9E-08 56.5 11.0 106 1-110 144-270 (374)
297 PF00202 Aminotran_3: Aminotra 97.2 0.001 2.2E-08 59.7 6.5 118 1-143 206-337 (339)
298 PRK06105 aminotransferase; Pro 97.1 0.011 2.3E-07 55.4 13.3 121 1-143 247-385 (460)
299 PRK05639 4-aminobutyrate amino 97.1 0.0059 1.3E-07 57.1 11.5 118 1-143 251-381 (457)
300 PRK06541 hypothetical protein; 97.1 0.01 2.3E-07 55.5 13.0 121 1-143 250-385 (460)
301 PRK06943 adenosylmethionine--8 97.1 0.011 2.5E-07 55.1 13.1 170 1-220 251-446 (453)
302 PRK12566 glycine dehydrogenase 97.1 0.0054 1.2E-07 61.7 11.3 42 1-42 666-709 (954)
303 TIGR00713 hemL glutamate-1-sem 97.1 0.0033 7.2E-08 57.7 9.2 120 1-144 224-358 (423)
304 PRK03715 argD acetylornithine 97.0 0.012 2.5E-07 54.0 12.6 166 1-220 208-393 (395)
305 COG0160 GabT 4-aminobutyrate a 97.0 0.0086 1.9E-07 55.8 11.7 169 1-221 251-446 (447)
306 PRK06938 diaminobutyrate--2-ox 97.0 0.006 1.3E-07 57.1 10.8 115 1-143 260-390 (464)
307 PRK09221 beta alanine--pyruvat 97.0 0.021 4.5E-07 53.2 14.1 170 1-220 247-443 (445)
308 PRK00062 glutamate-1-semialdeh 97.0 0.0029 6.3E-08 58.4 8.3 120 1-144 226-360 (426)
309 COG3977 Alanine-alpha-ketoisov 97.0 0.01 2.2E-07 52.6 11.1 59 1-64 207-273 (417)
310 TIGR03251 LAT_fam L-lysine 6-t 97.0 0.012 2.7E-07 54.5 12.4 165 1-220 247-430 (431)
311 PRK06062 hypothetical protein; 97.0 0.005 1.1E-07 57.5 9.7 118 1-143 243-378 (451)
312 KOG1359 Glycine C-acetyltransf 97.0 0.01 2.2E-07 52.5 10.8 132 1-156 218-364 (417)
313 PRK08593 4-aminobutyrate amino 97.0 0.007 1.5E-07 56.4 10.6 119 1-143 236-367 (445)
314 COG1103 Archaea-specific pyrid 96.9 0.0028 6.1E-08 55.4 6.9 110 1-113 181-303 (382)
315 PRK07482 hypothetical protein; 96.9 0.033 7.2E-07 52.1 14.4 121 1-143 249-388 (461)
316 PRK07495 4-aminobutyrate amino 96.9 0.01 2.2E-07 55.0 10.8 174 1-221 227-422 (425)
317 PRK07036 hypothetical protein; 96.9 0.017 3.6E-07 54.2 12.3 120 1-143 249-388 (466)
318 PLN02414 glycine dehydrogenase 96.8 0.025 5.5E-07 57.6 13.9 51 1-55 258-315 (993)
319 PRK06149 hypothetical protein; 96.8 0.014 3E-07 59.6 11.9 118 1-143 773-906 (972)
320 PLN02368 alanine transaminase 96.8 0.026 5.6E-07 52.0 12.7 115 1-117 238-385 (407)
321 PRK06917 hypothetical protein; 96.8 0.042 9.2E-07 51.2 14.2 120 1-143 229-365 (447)
322 PRK08637 hypothetical protein; 96.8 0.057 1.2E-06 49.0 14.7 58 5-62 183-256 (388)
323 PRK06916 adenosylmethionine--8 96.8 0.017 3.7E-07 54.0 11.5 120 1-143 253-391 (460)
324 PRK07481 hypothetical protein; 96.8 0.025 5.5E-07 52.7 12.4 121 1-143 242-381 (449)
325 PRK07030 adenosylmethionine--8 96.8 0.024 5.3E-07 53.1 12.3 119 1-143 244-382 (466)
326 PRK00615 glutamate-1-semialdeh 96.8 0.014 3E-07 54.3 10.6 100 1-106 230-340 (433)
327 PRK12403 putative aminotransfe 96.7 0.017 3.7E-07 54.0 10.8 120 1-143 251-388 (460)
328 PLN03032 serine decarboxylase; 96.6 0.035 7.5E-07 50.7 12.0 113 1-117 186-322 (374)
329 KOG1549 Cysteine desulfurase N 96.6 0.012 2.6E-07 54.3 8.6 51 1-54 206-257 (428)
330 PRK08297 L-lysine aminotransfe 96.5 0.027 5.9E-07 52.4 11.0 165 1-220 254-441 (443)
331 TIGR02617 tnaA_trp_ase tryptop 96.5 0.012 2.7E-07 54.8 8.2 104 1-108 212-344 (467)
332 PRK12389 glutamate-1-semialdeh 96.5 0.027 5.9E-07 52.1 10.6 101 1-106 229-339 (428)
333 COG0161 BioA Adenosylmethionin 96.5 0.021 4.6E-07 53.2 9.6 121 1-143 244-381 (449)
334 PRK06931 diaminobutyrate--2-ox 96.4 0.044 9.6E-07 51.3 11.5 115 1-143 254-384 (459)
335 PRK04013 argD acetylornithine/ 96.4 0.04 8.6E-07 50.1 10.9 113 1-145 191-310 (364)
336 PF00282 Pyridoxal_deC: Pyrido 96.3 0.0076 1.6E-07 54.9 5.5 115 1-117 219-363 (373)
337 KOG2862 Alanine-glyoxylate ami 96.2 0.34 7.4E-06 43.3 15.1 104 1-109 168-302 (385)
338 COG3844 Kynureninase [Amino ac 96.2 0.063 1.4E-06 48.2 10.5 179 1-221 191-403 (407)
339 PLN02452 phosphoserine transam 96.1 0.095 2.1E-06 47.7 11.7 131 6-157 170-321 (365)
340 PLN02974 adenosylmethionine-8- 96.0 0.055 1.2E-06 54.2 10.5 121 1-143 614-756 (817)
341 KOG0259 Tyrosine aminotransfer 96.0 0.19 4E-06 46.0 12.6 115 1-117 227-361 (447)
342 TIGR00699 GABAtrns_euk 4-amino 95.9 0.025 5.3E-07 53.2 7.0 128 1-156 280-425 (464)
343 COG4992 ArgD Ornithine/acetylo 95.8 0.058 1.3E-06 49.6 8.9 166 1-221 213-399 (404)
344 KOG1368 Threonine aldolase [Am 95.7 0.024 5.2E-07 50.2 5.8 115 1-120 183-305 (384)
345 PRK08742 adenosylmethionine--8 95.7 0.12 2.6E-06 48.6 10.9 119 1-143 266-403 (472)
346 PRK06148 hypothetical protein; 95.7 0.12 2.7E-06 53.0 11.8 117 1-143 813-946 (1013)
347 KOG0633 Histidinol phosphate a 95.6 0.36 7.9E-06 42.3 12.6 168 5-217 190-374 (375)
348 PRK07480 putative aminotransfe 95.3 0.21 4.5E-06 46.8 11.1 121 1-143 248-384 (456)
349 TIGR03801 asp_4_decarbox aspar 95.3 0.35 7.6E-06 46.2 12.7 53 2-55 269-327 (521)
350 PRK07483 hypothetical protein; 95.2 0.14 3E-06 47.7 9.4 120 1-143 229-365 (443)
351 PRK12462 phosphoserine aminotr 95.0 1.5 3.3E-05 40.0 15.2 137 3-158 165-321 (364)
352 COG4100 Cystathionine beta-lya 94.8 0.41 9E-06 42.7 10.7 139 6-159 201-344 (416)
353 TIGR01365 serC_2 phosphoserine 94.8 0.25 5.5E-06 45.1 9.9 101 5-110 154-284 (374)
354 PRK07046 aminotransferase; Val 94.8 0.14 3.1E-06 47.8 8.4 120 1-143 247-385 (453)
355 PLN02263 serine decarboxylase 94.6 0.56 1.2E-05 44.2 11.6 113 1-117 253-389 (470)
356 COG1932 SerC Phosphoserine ami 94.2 1.1 2.4E-05 40.7 12.1 169 7-220 171-363 (365)
357 KOG0628 Aromatic-L-amino-acid/ 93.3 1.2 2.6E-05 41.7 11.0 140 1-158 260-427 (511)
358 PRK09275 aspartate aminotransf 93.2 1.6 3.5E-05 41.8 12.2 52 3-55 273-328 (527)
359 PF02347 GDC-P: Glycine cleava 93.2 0.67 1.5E-05 43.2 9.4 105 1-108 221-364 (429)
360 TIGR03811 tyr_de_CO2_Ent tyros 93.1 2.5 5.4E-05 41.2 13.4 80 27-108 373-475 (608)
361 KOG1357 Serine palmitoyltransf 92.9 0.28 6.2E-06 45.7 6.3 100 2-108 302-424 (519)
362 KOG1360 5-aminolevulinate synt 92.8 3.2 6.9E-05 38.6 12.8 103 1-108 328-446 (570)
363 KOG0257 Kynurenine aminotransf 90.6 0.8 1.7E-05 42.2 6.6 105 1-108 200-326 (420)
364 COG1448 TyrB Aspartate/tyrosin 90.6 2.7 5.9E-05 38.5 9.9 143 3-160 202-369 (396)
365 TIGR00461 gcvP glycine dehydro 90.6 2.9 6.3E-05 42.7 11.1 51 1-54 218-274 (939)
366 PF04864 Alliinase_C: Allinase 89.5 3.7 8E-05 37.3 9.7 177 6-215 162-360 (363)
367 PLN02482 glutamate-1-semialdeh 89.2 1 2.2E-05 42.5 6.4 100 1-106 275-385 (474)
368 PRK06209 glutamate-1-semialdeh 88.9 1.1 2.4E-05 41.5 6.3 100 1-106 212-327 (431)
369 PF05889 SLA_LP_auto_ag: Solub 88.1 0.34 7.4E-06 44.4 2.3 58 1-61 180-245 (389)
370 KOG1404 Alanine-glyoxylate ami 88.0 2.3 5E-05 39.2 7.5 115 1-143 241-373 (442)
371 KOG1405 4-aminobutyrate aminot 87.9 1.3 2.7E-05 40.5 5.7 144 1-169 300-453 (484)
372 COG0403 GcvP Glycine cleavage 87.2 1.8 4E-05 40.1 6.4 50 2-54 236-291 (450)
373 COG0001 HemL Glutamate-1-semia 85.8 1.9 4.1E-05 40.2 5.8 123 1-143 229-363 (432)
374 KOG0629 Glutamate decarboxylas 84.9 1.3 2.8E-05 41.2 4.3 113 1-116 278-421 (510)
375 KOG0256 1-aminocyclopropane-1- 82.2 8.7 0.00019 35.7 8.4 82 2-86 255-349 (471)
376 KOG0634 Aromatic amino acid am 82.0 46 0.00099 31.3 14.9 55 1-57 232-313 (472)
377 KOG2040 Glycine dehydrogenase 80.0 4 8.6E-05 40.1 5.6 151 2-156 706-912 (1001)
378 COG3033 TnaA Tryptophanase [Am 79.7 3.2 7E-05 38.0 4.7 105 1-109 214-347 (471)
379 COG3564 Uncharacterized protei 73.4 1 2.2E-05 33.2 -0.1 37 121-160 69-111 (116)
380 KOG1383 Glutamate decarboxylas 71.0 20 0.00044 33.7 7.6 171 5-220 248-446 (491)
381 PRK12566 glycine dehydrogenase 70.7 14 0.00031 37.9 7.1 51 1-54 232-288 (954)
382 COG2022 ThiG Uncharacterized e 57.7 3.6 7.8E-05 35.4 0.1 30 3-32 179-209 (262)
383 COG1003 GcvP Glycine cleavage 51.3 11 0.00023 35.4 2.2 40 1-40 229-270 (496)
384 KOG1412 Aspartate aminotransfe 45.9 1.1E+02 0.0023 27.9 7.4 113 30-160 246-376 (410)
385 KOG1402 Ornithine aminotransfe 41.0 49 0.0011 30.2 4.6 98 1-107 236-342 (427)
386 PRK08446 coproporphyrinogen II 36.9 77 0.0017 28.4 5.4 13 196-208 108-120 (350)
387 PF01037 AsnC_trans_reg: AsnC 36.2 1.2E+02 0.0027 19.7 6.1 45 96-155 10-55 (74)
388 PF05690 ThiG: Thiazole biosyn 33.4 5.5 0.00012 34.3 -2.4 30 3-32 172-202 (247)
389 TIGR03687 pupylate_cterm ubiqu 29.9 51 0.0011 19.4 1.9 15 205-219 3-17 (33)
390 TIGR00538 hemN oxygen-independ 28.3 92 0.002 29.0 4.6 13 196-208 161-173 (455)
391 PRK12595 bifunctional 3-deoxy- 27.6 25 0.00054 32.0 0.6 31 4-34 285-323 (360)
392 KOG1401 Acetylornithine aminot 27.1 1.3E+02 0.0027 28.2 5.0 82 1-87 235-325 (433)
393 PRK05628 coproporphyrinogen II 27.0 1.4E+02 0.003 26.9 5.4 12 196-207 118-129 (375)
394 PF03930 Flp_N: Recombinase Fl 25.8 1.2E+02 0.0026 21.7 3.6 30 191-220 27-56 (82)
395 COG1920 Predicted nucleotidylt 24.5 2E+02 0.0043 24.2 5.2 73 144-216 99-183 (210)
396 PF04214 DUF411: Protein of un 24.2 1.3E+02 0.0028 20.9 3.5 23 98-120 42-64 (70)
397 PRK13347 coproporphyrinogen II 22.7 1.7E+02 0.0037 27.3 5.2 14 196-209 162-175 (453)
398 COG3473 Maleate cis-trans isom 22.5 2.4E+02 0.0052 24.1 5.4 118 27-159 67-206 (238)
399 cd02958 UAS UAS family; UAS is 22.1 1.5E+02 0.0032 21.6 3.8 27 194-220 87-113 (114)
400 KOG1403 Predicted alanine-glyo 21.0 4.7E+02 0.01 23.8 7.2 129 2-158 239-395 (452)
401 PRK13398 3-deoxy-7-phosphohept 20.2 50 0.0011 28.7 1.0 29 5-33 195-231 (266)
402 KOG3843 Predicted serine hydro 20.1 18 0.00039 32.1 -1.8 49 1-52 182-237 (432)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-76 Score=530.56 Aligned_cols=221 Identities=54% Similarity=0.891 Sum_probs=211.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcCCCCChHhHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSGLAPFDCWI 79 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g~~~sp~da~l 79 (223)
+||++|+.+||||||+||++|+||++||||||||+|||++||||+++|+++.+++++++.+....+ .+|..++|+|||+
T Consensus 174 ~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l 253 (396)
T COG0626 174 LAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWL 253 (396)
T ss_pred HHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 478999999999999999999999999999999999999999999999887777778777766555 6999999999999
Q ss_pred HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcc
Q 027424 80 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 159 (223)
Q Consensus 80 l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~ 159 (223)
++||||||.+||++|++||++||+||++||.|++|+|||+++||+|++++||++|+||||||++.+.+++++|+++|++|
T Consensus 254 ~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~ 333 (396)
T COG0626 254 LLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLF 333 (396)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999995438899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
.+++||||+|||+++|+.|+|..+++|+|++.||++++|||||||||++|||+||+|||+++
T Consensus 334 ~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 334 KLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred EEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=1.9e-71 Score=503.56 Aligned_cols=219 Identities=48% Similarity=0.819 Sum_probs=198.3
Q ss_pred CccccC-CEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecC-hhHHHHHHHHHHhcCCCCChHhHH
Q 027424 1 MAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERLAKELYFLQNAEGSGLAPFDCW 78 (223)
Q Consensus 1 ia~~~g-~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~-~~~~~~l~~~~~~~g~~~sp~da~ 78 (223)
+||++| +++||||||++|++++||++||||||||+|||++||+|+++|+|++++ +++.++++..+..+|.+++|+|||
T Consensus 165 ~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ 244 (386)
T PF01053_consen 165 LAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAW 244 (386)
T ss_dssp HHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHH
T ss_pred HHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHH
Confidence 478999 999999999999999999999999999999999999999999999888 677788888889999999999999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH-HHHHHHHhhcC
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTK 157 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~-~~~~~f~~~l~ 157 (223)
+++|||+||.+||+++++||++||+||++||.|++|+||||++||+|+++++|++|+||||||++++. +++++|+++|+
T Consensus 245 ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~ 324 (386)
T PF01053_consen 245 LLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALK 324 (386)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-S
T ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999766 58999999999
Q ss_pred cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 158 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 158 l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
+|.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||+
T Consensus 325 l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 325 LFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp SSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999996
No 3
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-69 Score=485.01 Aligned_cols=221 Identities=47% Similarity=0.714 Sum_probs=211.8
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++|||||||++|++++||++|||||+||+||||+||||++||+++.|.++++++++..+..+|.+++|++||++
T Consensus 187 la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll 266 (409)
T KOG0053|consen 187 LAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLL 266 (409)
T ss_pred HHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE-EeCCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf-~~~~~~~~~~f~~~l~l~ 159 (223)
.|+++|+.+||+++.+||+++|+||++||.|++|+||||++||+|+++++|.+|.+|+++| .+++.+.+++|+++||+|
T Consensus 267 ~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~ 346 (409)
T KOG0053|consen 267 SRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLF 346 (409)
T ss_pred hcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999999999999999999999876554555 558899999999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
++|+|||++|||+++|+.|||++ ++|+|.+.||+++|||+||||||.+|||+||+|||+++.
T Consensus 347 ~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~~ 408 (409)
T KOG0053|consen 347 TKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKAK 408 (409)
T ss_pred hcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999 999999999999999999999999999999999999764
No 4
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-69 Score=476.40 Aligned_cols=221 Identities=43% Similarity=0.737 Sum_probs=205.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChh----------------------HH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER----------------------LA 58 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~----------------------~~ 58 (223)
+||++|+|+|||||+++|++++|+++||||||||+|||++||+..+||+++..+.- +.
T Consensus 172 iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~ 251 (426)
T COG2873 172 IAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYT 251 (426)
T ss_pred HHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehh
Confidence 58999999999999999999999999999999999999999999999999875421 01
Q ss_pred H---------HH-HHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHH
Q 027424 59 K---------EL-YFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 128 (223)
Q Consensus 59 ~---------~l-~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 128 (223)
+ +. ....+.+|+++||+++|++++|||||.+||+|+++||+++|+||++||+|.+|+||||++||+|+++
T Consensus 252 ~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la 331 (426)
T COG2873 252 ETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALA 331 (426)
T ss_pred hhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHH
Confidence 1 11 1234678999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC
Q 027424 129 YSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 206 (223)
Q Consensus 129 ~~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd 206 (223)
+|+. +|+|+++||++ ++.++.++|+++|++|...+++|+.+||+.||+++||.++++|++.++||++++||+|||+||
T Consensus 332 ~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGIEd 411 (426)
T COG2873 332 KKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGIED 411 (426)
T ss_pred HhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEeccCC
Confidence 9986 69999999999 677999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 027424 207 VNDLISDLDKALRTG 221 (223)
Q Consensus 207 ~~dL~~dl~~Al~~~ 221 (223)
++|||+||+|||+++
T Consensus 412 ~~DiiaDl~qAl~~~ 426 (426)
T COG2873 412 IDDIIADLEQALEAA 426 (426)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999874
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=8.3e-68 Score=480.74 Aligned_cols=221 Identities=44% Similarity=0.715 Sum_probs=213.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|++++|+++|||++++|+|||++||+|++||+++++++++.++++.++..+|.+++|+|||++
T Consensus 163 la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~ 242 (388)
T PRK08861 163 KAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMT 242 (388)
T ss_pred HHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHH
Confidence 47889999999999999999999999999999999999999999999999888778888888888999999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+|||+||.+||+||++||++||+||++||.|++|+||||++||+|+++++|++|+||||||++ ++.+.+.+|+++|++|
T Consensus 243 ~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~ 322 (388)
T PRK08861 243 LRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALF 322 (388)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5688899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
.+++||||++||+++|++++|+.+++++|++.||++++|||||||||+||||+||+|||+++
T Consensus 323 ~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 323 SLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred eEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999965
No 6
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.1e-65 Score=467.38 Aligned_cols=216 Identities=32% Similarity=0.554 Sum_probs=201.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++++||||+++|++++|+++|||+|++|+|||++||||+++|+++ .+++++++++..+..+|.+++|+|||++
T Consensus 171 la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~-~~~~~~~~l~~~~~~~G~~~~p~~a~l~ 249 (394)
T PRK09028 171 IAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTAT-ANEKHWDQLREHSYLMGQCTSPDDVYLA 249 (394)
T ss_pred HHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEE-CCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999999999775 4456677788777889999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC--CHHHHHHHHhhcCc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVVETTKY 158 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~--~~~~~~~f~~~l~l 158 (223)
+|||+||.+||++|++||++||+||++||+|++|+||||++||+|+++++|++|+|||+||+++ +.+.+++|+++|++
T Consensus 250 ~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l 329 (394)
T PRK09028 250 MRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQH 329 (394)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999994 57889999999999
Q ss_pred ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 159 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
|.+++||||++||+++|++++|... +++.|+.+++|||||||||+||||+||+|||++.
T Consensus 330 ~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~~ 388 (394)
T PRK09028 330 FKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFERY 388 (394)
T ss_pred ceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999998887643 2347888899999999999999999999999853
No 7
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.9e-65 Score=468.90 Aligned_cols=221 Identities=34% Similarity=0.591 Sum_probs=204.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecCh---------hH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------RL-------------- 57 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~---------~~-------------- 57 (223)
+||++|++|||||||++|++++|+++|||||+||+|||++||+|+++|+++.++. ++
T Consensus 172 iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~ 251 (432)
T PRK06702 172 AAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQ 251 (432)
T ss_pred HHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhh
Confidence 5899999999999999999999999999999999999999999999998874331 11
Q ss_pred --------HHHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHH
Q 027424 58 --------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 129 (223)
Q Consensus 58 --------~~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~ 129 (223)
.+......+.+|.++||++||+++|+|+|+..||+++++||.+|++||++||.|++|+|||+++||+|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~ 331 (432)
T PRK06702 252 NFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQ 331 (432)
T ss_pred ccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHH
Confidence 111223455679999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCH
Q 027424 130 SQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV 207 (223)
Q Consensus 130 ~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~ 207 (223)
+|| .|+||||||++ ++.+.+.+|+++|++|.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||+
T Consensus 332 ~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~ 411 (432)
T PRK06702 332 KYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIEDV 411 (432)
T ss_pred HhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCH
Confidence 999 78999999999 6778899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC
Q 027424 208 NDLISDLDKALRTG 221 (223)
Q Consensus 208 ~dL~~dl~~Al~~~ 221 (223)
||||+||+|||+-.
T Consensus 412 eDLi~Dl~~Al~~~ 425 (432)
T PRK06702 412 SDIIADLEAALVGG 425 (432)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999854
No 8
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.1e-65 Score=463.23 Aligned_cols=216 Identities=29% Similarity=0.503 Sum_probs=197.5
Q ss_pred Ccccc--CCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHH
Q 027424 1 MAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 78 (223)
Q Consensus 1 ia~~~--g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ 78 (223)
+||++ |++++|||||++|++++|+++|||+|+||+|||++||||+++|+++.+ ++.+++++..+..+|.+++|+|||
T Consensus 172 ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~~a~ 250 (395)
T PRK08114 172 AVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQLRENSYLMGQMVDADTAY 250 (395)
T ss_pred HHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcC-HHHHHHHHHHHHhccCCCCHHHHH
Confidence 47887 499999999999999999999999999999999999999999987655 456677777778899999999999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC---CHHHHHHHHhh
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---SLALSKHVVET 155 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~---~~~~~~~f~~~ 155 (223)
|++|||+||.+||+||++||.+||+||++||.|++|+||||++||+|+++++|++|+||||||+++ +.+++.+|+++
T Consensus 251 l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~ 330 (395)
T PRK08114 251 MTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDN 330 (395)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999994 47889999999
Q ss_pred cCcceeccccCCCCCCCC--CCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 156 TKYFSITVSFGSVKSLIS--MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~--~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+++|.+++||||++||++ +|..++|.. +++ +.|+.+++|||||||||+||||+||+|||++.
T Consensus 331 l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 331 FSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred CCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999 566666655 443 45677799999999999999999999999864
No 9
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.6e-65 Score=462.52 Aligned_cols=215 Identities=31% Similarity=0.560 Sum_probs=198.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|++++|+++|||||+||+|||++||+|+++|+++.+ ++.+++++.....+|.+++|+|||++
T Consensus 174 la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~da~l~ 252 (395)
T PRK05967 174 AAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSAN-EKCWPQLLEAHGTLGLCAGPDDTYQI 252 (395)
T ss_pred HHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcC-HHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 47999999999999999999999999999999999999999999999987655 46677787777789999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-----CHHHHHHHHhh
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-----SLALSKHVVET 155 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-----~~~~~~~f~~~ 155 (223)
+|||+||.+||+||++||.+||+||++||+|++|+||||++||+|++++||++|+|||+||+++ +.+.+++|+++
T Consensus 253 ~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~ 332 (395)
T PRK05967 253 LRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDA 332 (395)
T ss_pred HcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999994 36889999999
Q ss_pred cCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 156 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
|++|.+++||||++||++|+ .++.+.+.+.|+.+++|||||||||++|||+||+|||+++.
T Consensus 333 l~l~~~~~slG~~~sLi~~~------~~~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 333 LEIFGLGYSWGGYESLALHV------KLGDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAAS 393 (395)
T ss_pred CCcceEccCCCCcceeeeeC------CCChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhhh
Confidence 99999999999999999863 33445555579999999999999999999999999999753
No 10
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.2e-64 Score=458.21 Aligned_cols=222 Identities=43% Similarity=0.683 Sum_probs=213.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|..++|+++|||+|++|+|||++||+|+++|+++++++++.+++...+...|.+++|+++|++
T Consensus 162 ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~ 241 (386)
T PRK08045 162 LAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLL 241 (386)
T ss_pred HHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999887777888888888889999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+|+|+|+..||+++++||++||+||++||.|++|+||||++||+|+++++|++|+||||||++ ++.+++++|+++|++|
T Consensus 242 ~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~ 321 (386)
T PRK08045 242 LRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLF 321 (386)
T ss_pred HhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccce
Confidence 999999999999999999999999999999999999999999999999999999999999999 5678889999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++++
T Consensus 322 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 322 TLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAAN 384 (386)
T ss_pred eEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999875
No 11
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.9e-63 Score=457.94 Aligned_cols=222 Identities=41% Similarity=0.664 Sum_probs=205.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecCh-------------------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE------------------------- 55 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~------------------------- 55 (223)
+||++|+++|||||+++|++++|+++|||+|++|+|||++||+|++||+++.+..
T Consensus 180 la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (436)
T PRK07812 180 VAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAE 259 (436)
T ss_pred HHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhh
Confidence 4799999999999999999999999999999999999999999999998875431
Q ss_pred ----hH-HHHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHh
Q 027424 56 ----RL-AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 130 (223)
Q Consensus 56 ----~~-~~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~ 130 (223)
.+ .+......+..|..++|+|||+++|+|+||.+||+++++||.+||+||++||.|++|+|||+++||+|+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~ 339 (436)
T PRK07812 260 LGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKR 339 (436)
T ss_pred cchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHH
Confidence 00 0112234567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHH
Q 027424 131 QA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 208 (223)
Q Consensus 131 ~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~ 208 (223)
|+ +|+||||||++ ++.+.+++|+++|++|..++||||++||+++|++++|+.+++|+|++.||++++|||||||||+|
T Consensus 340 ~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGlEd~~ 419 (436)
T PRK07812 340 LAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGIEGID 419 (436)
T ss_pred hCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHH
Confidence 99 78999999999 66788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 027424 209 DLISDLDKALRTGP 222 (223)
Q Consensus 209 dL~~dl~~Al~~~~ 222 (223)
|||+||+|||+++.
T Consensus 420 dli~dl~~Al~~~~ 433 (436)
T PRK07812 420 DILADLEAGFAAAK 433 (436)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999753
No 12
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=4.3e-63 Score=458.06 Aligned_cols=223 Identities=87% Similarity=1.330 Sum_probs=214.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++||||||+++|+.++|+.+|+|++++|+|||++||+|++||+++++++.+.++++..+...|..++|++||++
T Consensus 242 lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~ 321 (464)
T PLN02509 242 MAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_pred HHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999888877777777777777888999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++|+|+..||+++++||+++++||++||.|++|+||||++||+|+++++|++|+|||+||++++.+.+++|+++|++|.
T Consensus 322 lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~ 401 (464)
T PLN02509 322 LRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFS 401 (464)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 223 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~~ 223 (223)
+++||||++||+++|++++|+.+++|+|++.||++++|||||||||+||||+||+|||++.++
T Consensus 402 ~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~~~~ 464 (464)
T PLN02509 402 IAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRTGPL 464 (464)
T ss_pred EcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcccCC
Confidence 999999999999999999999999999999999999999999999999999999999998874
No 13
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.7e-63 Score=457.05 Aligned_cols=220 Identities=38% Similarity=0.594 Sum_probs=204.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChh------------------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------------ 56 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~------------------------ 56 (223)
+||++|++++||||+++|..++|+++|||++++|+|||++||+|++||+++.+++.
T Consensus 180 la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (437)
T PRK05613 180 VAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHG 259 (437)
T ss_pred HHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCcccccc
Confidence 47999999999999999999999999999999999999999999999998865320
Q ss_pred ----------H-HHHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcch
Q 027424 57 ----------L-AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 125 (223)
Q Consensus 57 ----------~-~~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~ 125 (223)
+ .+........+|.+++|++||+++|||+||.+||+++++||.+||+||++||+|++|+|||+++||+|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~ 339 (437)
T PRK05613 260 LKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWY 339 (437)
T ss_pred ccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccH
Confidence 0 01122345678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec
Q 027424 126 ELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 203 (223)
Q Consensus 126 ~~~~~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG 203 (223)
+++++|+ .|+||||||++ ++.+.+++|+++|++|..++||||++||+++|++++|+.+++|+|++.||++++||||||
T Consensus 340 ~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvG 419 (437)
T PRK05613 340 ATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVG 419 (437)
T ss_pred HHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEec
Confidence 9999996 78999999999 577889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc
Q 027424 204 IEDVNDLISDLDKALRT 220 (223)
Q Consensus 204 lEd~~dL~~dl~~Al~~ 220 (223)
|||++|||+||+|||++
T Consensus 420 lE~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 420 IEDIDDIIADLEGGFAA 436 (437)
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 99999999999999986
No 14
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.5e-63 Score=456.90 Aligned_cols=222 Identities=41% Similarity=0.689 Sum_probs=206.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhH-----------------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL----------------------- 57 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~----------------------- 57 (223)
+||++|+++|||||+++|+.++|+++|+|+|++|+|||++||+|++||+++.+++..
T Consensus 174 la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (431)
T PRK08248 174 IAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYT 253 (431)
T ss_pred HHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhh
Confidence 478999999999999999999999999999999999999999999999887654211
Q ss_pred ---------HHHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHH
Q 027424 58 ---------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 128 (223)
Q Consensus 58 ---------~~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 128 (223)
..........+|..++|+|||+++|||+||.+||+++++||.+||+||++||.|++|+|||+++||+|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~ 333 (431)
T PRK08248 254 DAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELA 333 (431)
T ss_pred hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHH
Confidence 11223455678999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC
Q 027424 129 YSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 206 (223)
Q Consensus 129 ~~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd 206 (223)
++|+ +|+||||||++ ++.+.+++|+++|++|.+++||||++||+++|++++|+.+++|+|+++||++++|||||||||
T Consensus 334 ~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd 413 (431)
T PRK08248 334 KKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGTEA 413 (431)
T ss_pred HHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEeccCC
Confidence 9999 68999999999 677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC
Q 027424 207 VNDLISDLDKALRTGP 222 (223)
Q Consensus 207 ~~dL~~dl~~Al~~~~ 222 (223)
+||||+||+|||+++.
T Consensus 414 ~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 414 IDDILDDLRQAIRQSQ 429 (431)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999999764
No 15
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=8.3e-63 Score=447.25 Aligned_cols=221 Identities=44% Similarity=0.766 Sum_probs=212.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++||||||+++|..++|+++|+|++++|+|||++||+|+++|+++.+++++.++++.++..+|.+++|+++|++
T Consensus 161 la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~ 240 (382)
T TIGR02080 161 LAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLT 240 (382)
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999998888888888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+|+++|+..||+++++||..+++||++||.|++|+||||++||+|+++++|++|+||||||++ ++.+++.+|+++|++|
T Consensus 241 lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~ 320 (382)
T TIGR02080 241 LRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLF 320 (382)
T ss_pred HcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5678889999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
.+++||||++||+++|++++|+.+++++|++.||++++|||||||||++|||+||+|||+++
T Consensus 321 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~~ 382 (382)
T TIGR02080 321 TLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRAA 382 (382)
T ss_pred eEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999864
No 16
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2e-62 Score=445.13 Aligned_cols=220 Identities=44% Similarity=0.678 Sum_probs=211.4
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++||||+|+++|+.++|+++|+|+|++|+|||++||+|++||+++++++++.++++..+...|..++|+++|++
T Consensus 162 la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~ 241 (385)
T PRK08574 162 AAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLV 241 (385)
T ss_pred HHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999987788888888888778888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC--CCCeeEEEEe-CCHHHHHHHHhhcC
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLT-GSLALSKHVVETTK 157 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~--g~ggl~sf~~-~~~~~~~~f~~~l~ 157 (223)
+++|+|+..|++++++||.++++||++||.|++|+||||++||+|+++++|++ |+||||||++ ++.+++++|+++|+
T Consensus 242 l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~ 321 (385)
T PRK08574 242 LRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLK 321 (385)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999996 7999999999 67889999999999
Q ss_pred cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 158 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 158 l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+|.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++
T Consensus 322 l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 384 (385)
T PRK08574 322 LIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGS 384 (385)
T ss_pred cceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 17
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-62 Score=446.15 Aligned_cols=221 Identities=31% Similarity=0.483 Sum_probs=202.8
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecCh-------hH-------------HHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------RL-------------AKE 60 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~-------~~-------------~~~ 60 (223)
+||++|++++||||+++|..++|+++|+|+|++|+|||++||+|++||+++.+.. .+ ..+
T Consensus 156 la~~~gi~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (397)
T PRK05939 156 LCRERGLLYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQ 235 (397)
T ss_pred HHHHcCCEEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHH
Confidence 4789999999999999999999999999999999999999999999998864321 00 011
Q ss_pred H-HHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeE
Q 027424 61 L-YFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 139 (223)
Q Consensus 61 l-~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~ 139 (223)
+ ....+.+|..++|+|||+++|||+||.+||++|++||.+||+||++||+|++|+||||++||+|+++++|+.|+||||
T Consensus 236 ~~~~~~~~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~ 315 (397)
T PRK05939 236 IRKKGLRDMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLL 315 (397)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEE
Confidence 1 123357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 140 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 140 sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
||++++.+.+.+|++++++|.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||+
T Consensus 316 sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~ 395 (397)
T PRK05939 316 SFELADGIDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALD 395 (397)
T ss_pred EEEeCCHHHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHh
Confidence 99996566889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cC
Q 027424 220 TG 221 (223)
Q Consensus 220 ~~ 221 (223)
+.
T Consensus 396 ~~ 397 (397)
T PRK05939 396 AT 397 (397)
T ss_pred cC
Confidence 63
No 18
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=2.9e-62 Score=443.42 Aligned_cols=221 Identities=48% Similarity=0.786 Sum_probs=213.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|+.++|+++|+|++++|+|||++||+|+++|+++.+++++.++++..+...|..++|+++|++
T Consensus 159 la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~ 238 (380)
T PRK06176 159 VAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLL 238 (380)
T ss_pred HHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999888778888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++++|+..||+++++||.++++||++||.|.+|+||+|++||+|+++++|++|+|||+||++++.+.+.+|+++|++|.
T Consensus 239 ~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~ 318 (380)
T PRK06176 239 QRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFI 318 (380)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999977888999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||+++
T Consensus 319 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 319 LGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred EccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999875
No 19
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=7e-62 Score=446.63 Aligned_cols=221 Identities=40% Similarity=0.678 Sum_probs=203.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHH----------------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA---------------------- 58 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~---------------------- 58 (223)
+||++|++||||||+++|+.++|+++|||||++|+|||++||+|++||+++.++...+
T Consensus 168 la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (425)
T PRK06084 168 AAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTY 247 (425)
T ss_pred HHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchh
Confidence 4789999999999999999999999999999999999999999999998876432100
Q ss_pred -----------HHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHH
Q 027424 59 -----------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 127 (223)
Q Consensus 59 -----------~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~ 127 (223)
.........+|..++|++||+++|+|+||..||+++++||+++|+||++||+|++|+|||+++||+|++
T Consensus 248 ~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~ 327 (425)
T PRK06084 248 TEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHEL 327 (425)
T ss_pred hhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHH
Confidence 001122456799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCC-CCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC
Q 027424 128 HYSQAKG-AGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE 205 (223)
Q Consensus 128 ~~~~~~g-~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE 205 (223)
+++|++| +||||||++ ++.+++++|+++|++|.+++||||++||+++|++++|+.+++|+|++.||++++||||||||
T Consensus 328 ~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE 407 (425)
T PRK06084 328 ARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIE 407 (425)
T ss_pred HHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC
Confidence 9999988 899999999 67788999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcC
Q 027424 206 DVNDLISDLDKALRTG 221 (223)
Q Consensus 206 d~~dL~~dl~~Al~~~ 221 (223)
|++|||+||+|||+++
T Consensus 408 d~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 408 HIDDIIADLAQALDAS 423 (425)
T ss_pred CHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 20
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.5e-61 Score=440.51 Aligned_cols=221 Identities=44% Similarity=0.749 Sum_probs=212.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|..++|+++|||++++|+|||++||+|+++|+++.+++++.+++...+...|..++|+++|++
T Consensus 170 la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~ 249 (405)
T PRK08776 170 AAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLT 249 (405)
T ss_pred HHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999998999999999999999999999999999999888888888888777788888999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++++|+..|++++++|+..+++||++||.|++|+||++++||+|+++++|++|+|||+||++ ++.+++++|+|+|++|
T Consensus 250 ~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~ 329 (405)
T PRK08776 250 LRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYF 329 (405)
T ss_pred HhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 6778899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||+||||+||+|||+++
T Consensus 330 ~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 391 (405)
T PRK08776 330 TLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred eEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999865
No 21
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2e-61 Score=438.25 Aligned_cols=212 Identities=36% Similarity=0.630 Sum_probs=202.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++| ++||||+++|++++|+.+|||++++|+|||++||+|++||+|+++++++.++++..+...|..++|++||++
T Consensus 173 la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~ 250 (384)
T PRK06434 173 FCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLA 250 (384)
T ss_pred HHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 478887 678999999999999999999999999999999999999999888888888888777788999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++|+|+..||+++++||+++++||++||+|++|+||||+ ++++|++|+|||+||++++.+.+++|+++|++|.
T Consensus 251 ~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~ 324 (384)
T PRK06434 251 LRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPM 324 (384)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECCHHHHHHHHHhCCcce
Confidence 9999999999999999999999999999999999999995 8999999999999999977888999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++
T Consensus 325 ~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 325 VAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred EccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999974
No 22
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.3e-61 Score=435.32 Aligned_cols=219 Identities=51% Similarity=0.858 Sum_probs=211.9
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||++++++++|+++|+||+++|+|||++||+|+++|+++++++++.++++..+...|..++|+++|++
T Consensus 159 la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~ 238 (377)
T PRK07671 159 IAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLL 238 (377)
T ss_pred HHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999998888878888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+|+++|+..||+++++||..|++||++||.|.+|+||++++||+|+++++|++|+||||||++++.+.+.+|++++++|.
T Consensus 239 ~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~ 318 (377)
T PRK07671 239 LRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFT 318 (377)
T ss_pred HcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
+++||||++||+++|+.++|+.+++|+|++.||++++|||||||||++|||+||+|||+
T Consensus 319 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 319 LAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred EccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999985
No 23
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4.7e-61 Score=437.91 Aligned_cols=221 Identities=40% Similarity=0.709 Sum_probs=211.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|+.++|+.+|+|+|++|+||+++||+|.+||+++. ++++.++++..+...|..++|+++|++
T Consensus 174 la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~ 252 (398)
T PRK08249 174 AAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLI 252 (398)
T ss_pred HHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4789999999999999999999999999999999999999999999998865 567888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++++|+..|++++++||+.+++||++||.|++|+||||++||+|+++++|++|+||||||++ ++.+.+++|+++|++|
T Consensus 253 l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~ 332 (398)
T PRK08249 253 LRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYA 332 (398)
T ss_pred HhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5778899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++++
T Consensus 333 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 333 HRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAHLE 395 (398)
T ss_pred eEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999998754
No 24
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=9.5e-61 Score=439.93 Aligned_cols=222 Identities=39% Similarity=0.633 Sum_probs=203.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChh------------------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------------ 56 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~------------------------ 56 (223)
+||++|+++|||||+++|++++|+++|||++++|+|||++||+|++||+++.+...
T Consensus 174 la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 253 (433)
T PRK08134 174 IAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFA 253 (433)
T ss_pred HHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchh
Confidence 47999999999999999999999999999999999999999999999988743210
Q ss_pred -------HHH-HHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHH
Q 027424 57 -------LAK-ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 128 (223)
Q Consensus 57 -------~~~-~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 128 (223)
+.. ........+|..++|++||+++++|+|+..||+++++||.++++||++||.|++|+||++++||+|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~ 333 (433)
T PRK08134 254 EESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALA 333 (433)
T ss_pred hccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 000 011123567889999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC
Q 027424 129 YSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 206 (223)
Q Consensus 129 ~~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd 206 (223)
++|+ +|+||||||++ ++.+.+++|+++|++|.+++|||+++||+++|++++|+.+++|+|++.||++++|||||||||
T Consensus 334 ~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGlE~ 413 (433)
T PRK08134 334 KRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGLED 413 (433)
T ss_pred HHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCC
Confidence 9999 78999999999 567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC
Q 027424 207 VNDLISDLDKALRTGP 222 (223)
Q Consensus 207 ~~dL~~dl~~Al~~~~ 222 (223)
+||||+||+|||++++
T Consensus 414 ~~dli~dl~~Al~~~~ 429 (433)
T PRK08134 414 ADDLIDDLKRALKAAE 429 (433)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999999753
No 25
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.5e-60 Score=438.13 Aligned_cols=221 Identities=41% Similarity=0.699 Sum_probs=203.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecCh-----------------h-----HH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----------------R-----LA 58 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~-----------------~-----~~ 58 (223)
+||++|+++|||||+++|+.++|+++|||+|++|+|||++||+|++||+++.++. . +.
T Consensus 173 la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 252 (427)
T PRK05994 173 VAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLH 252 (427)
T ss_pred HHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHH
Confidence 4789999999999999999999999999999999999999999999998875321 0 11
Q ss_pred HH----------HHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHH
Q 027424 59 KE----------LYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 128 (223)
Q Consensus 59 ~~----------l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 128 (223)
+. .....+..|..++|++||+++|+|+||..||+++++||+++++||++||+|++|+|||+++||+|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~ 332 (427)
T PRK05994 253 ETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALA 332 (427)
T ss_pred HHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 11 11124567999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC
Q 027424 129 YSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 206 (223)
Q Consensus 129 ~~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd 206 (223)
++|+ +|+||||||++ ++.+++++|+++|++|.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||
T Consensus 333 ~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~ 412 (427)
T PRK05994 333 QKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGIED 412 (427)
T ss_pred HHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEeccCC
Confidence 9996 78999999999 577889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 027424 207 VNDLISDLDKALRTG 221 (223)
Q Consensus 207 ~~dL~~dl~~Al~~~ 221 (223)
++|||+||+|||+++
T Consensus 413 ~~dli~dl~~Al~~~ 427 (427)
T PRK05994 413 VDDIIADLEQALAKA 427 (427)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999999864
No 26
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=1.4e-60 Score=435.36 Aligned_cols=218 Identities=39% Similarity=0.648 Sum_probs=207.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++||||||+++|+.++|+++|+|++|+|+|||++||+|++||+++++++.+.++++.+....|..++|+++|++
T Consensus 180 la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~ 259 (403)
T PRK07810 180 LAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVL 259 (403)
T ss_pred HHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999887765555677666778999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-C----CHHHHHHHHhh
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-G----SLALSKHVVET 155 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~----~~~~~~~f~~~ 155 (223)
+++|+|+..|++++++||.++++||++||.|++|+||||++||+|++++||++|+|||+||++ + +.+.+.+|+++
T Consensus 260 l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~ 339 (403)
T PRK07810 260 LKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDK 339 (403)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999 4 47889999999
Q ss_pred cCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 027424 156 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 218 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al 218 (223)
|++|.+++|||+++||+++|++++|+.+++|++++.||++++|||||||||++|||+||+|||
T Consensus 340 l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 340 LRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred CCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999998
No 27
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=1.5e-60 Score=434.53 Aligned_cols=222 Identities=36% Similarity=0.626 Sum_probs=210.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++++.++|+++|+|++++|+|||++||++.+||+++.+++.+.+.++......|..++|+++|++
T Consensus 175 la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~ 254 (398)
T PRK07504 175 IANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTL 254 (398)
T ss_pred HHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999998877655555566666778999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++|+|+..|++++++||+.+++||++||.|.+|+||||++||+|+++++|++|+|||+||++ ++.+++++|+++|++|
T Consensus 255 l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~ 334 (398)
T PRK07504 255 LKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIV 334 (398)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 6788899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
..++||||++||+++|++++|+.+++|+|++.||++++|||||||||+||||+||+|||+++.
T Consensus 335 ~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 335 RISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKVR 397 (398)
T ss_pred eecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999764
No 28
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=3.2e-60 Score=429.74 Aligned_cols=222 Identities=77% Similarity=1.190 Sum_probs=213.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|+.++|+++|+|++++|+|||++||+|+++|+++++++++.++++..+...|..++|+++|++
T Consensus 156 la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~ 235 (378)
T TIGR01329 156 MAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLL 235 (378)
T ss_pred HHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999888887878888777778999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++++|+..|++++++||..+++||++||.|++|+||+|++||+|+++++++.|+||||||++++.+.+.+|+++|++|.
T Consensus 236 ~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 236 LRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFS 315 (378)
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++++
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 377 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTAP 377 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999886
No 29
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=9.6e-60 Score=426.67 Aligned_cols=217 Identities=45% Similarity=0.748 Sum_probs=207.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++||||+|+++|+.++|+++|+|||++|+||+++||++++||+++.++ ++.++++......|..++|+++|++
T Consensus 164 la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~-~~~~~l~~~~~~~g~~~~p~~a~~~ 242 (380)
T TIGR01325 164 LAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE-ELMAEVAVYLRHTGPAMSPFNAWVL 242 (380)
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCH-HHHHHHHHHHHhhCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999999999887655 5667777666778989999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++++|+..|++++++||..+++||++||.|++|+||++++||+|++++||+.|+||||||++++.+.+++|+++|++|.
T Consensus 243 l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~ 322 (380)
T TIGR01325 243 LKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVS 322 (380)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999987888999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 218 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al 218 (223)
+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||
T Consensus 323 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 323 ITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred EcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999997
No 30
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1.1e-59 Score=427.69 Aligned_cols=219 Identities=42% Similarity=0.767 Sum_probs=207.8
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||+|+++|..++|+++|+|++++|+|||++||++++||+++.++ ++.+++.......|..++|+++|++
T Consensus 171 la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~-~~~~~~~~~~~~~g~~~~~~~a~~~ 249 (390)
T PRK08133 171 IAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSK-ELMEEVFGFLRTAGPTLSPFNAWVF 249 (390)
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCH-HHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999999999997665 4556666666778989999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++++|+..|++++++|+..+++||++||.|++|+||||++||+|+++++|++|+|||+||++ ++.+.+.+|++++++|
T Consensus 250 l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~ 329 (390)
T PRK08133 250 LKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLI 329 (390)
T ss_pred HcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5788899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||+||||+||+|||++
T Consensus 330 ~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 330 SITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred eEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999974
No 31
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=5.2e-59 Score=427.87 Aligned_cols=216 Identities=38% Similarity=0.678 Sum_probs=206.3
Q ss_pred cCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHHHhcH
Q 027424 5 HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 84 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll~~~l 84 (223)
+|+++||||||.+|+.++|+++|+|||++|+|||++||+++.+|+++. ++++.++++..+..+|.+++|+++|+++++|
T Consensus 209 ~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L 287 (427)
T PRK07049 209 HRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLG-RKALIRQVRALRSAIGTQLDPHSCWMLGRSL 287 (427)
T ss_pred CCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHcCC
Confidence 789999999999999999999999999999999999999999999875 4567788888888889999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCC--CCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCccee
Q 027424 85 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL--PEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSI 161 (223)
Q Consensus 85 ~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l--~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~ 161 (223)
+|+..|++++++|+..+++||++||+|.+|+|||+ ++||+|+++++|++|+||||||++ ++.+.+++|+++|++|.+
T Consensus 288 ~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~ 367 (427)
T PRK07049 288 ETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKL 367 (427)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEE
Confidence 99999999999999999999999999999999986 999999999999999999999999 577889999999999999
Q ss_pred ccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 162 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 162 ~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
++||||++||+++|++++|+.+++|+|++.||++++|||||||||+||||+||+|||+++
T Consensus 368 ~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 427 (427)
T PRK07049 368 AVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPDDLIADLAQALDAA 427 (427)
T ss_pred cccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999864
No 32
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=9.1e-59 Score=420.19 Aligned_cols=215 Identities=28% Similarity=0.506 Sum_probs=197.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|+.++|+++|||+|++|+|||++||+|++||+++.++ +.+++++......|.+++|+++|++
T Consensus 160 la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~~~l~~~~~~~G~~l~p~~a~~~ 238 (377)
T TIGR01324 160 AARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA-RTWDQLREHSYLMGQMVDADDAYTT 238 (377)
T ss_pred HHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCH-HHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999999999887765 4556676667788999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-C-CHHHHHHHHhhcCc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-G-SLALSKHVVETTKY 158 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~-~~~~~~~f~~~l~l 158 (223)
+|+++|+..||+++++||.++|+||++||.|++|+||||++||+|+++++|++|+|||+||++ + +.+.+.+|+++|++
T Consensus 239 ~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~ 318 (377)
T TIGR01324 239 LRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQL 318 (377)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999 4 67889999999999
Q ss_pred ceeccccCCCCCCCCCCc-cccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 159 FSITVSFGSVKSLISMPC-FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~-~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
|.+++||||++||+++|. .++|. .+.+.|+.+++|||||||||++|||+||+|||++.
T Consensus 319 ~~~~~slG~~~sl~~~~~~~~~~~-----~~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 319 FGLGYSWGGYESLALCNQPELGHR-----PNIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred ceEeccCCCccceeecCCCCCCHH-----HHHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 999999999999997432 56664 34577899999999999999999999999999863
No 33
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=1.1e-58 Score=421.33 Aligned_cols=219 Identities=42% Similarity=0.806 Sum_probs=205.4
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--HHhcCCCCChHhHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCW 78 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--~~~~g~~~sp~da~ 78 (223)
+||++|+++|||+|+++|+.++|+.+|+|+|++|+||+++||++.+||+++.+ +++.++++.. ....|..++|+++|
T Consensus 169 la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~-~~li~~l~~~~~~~~~g~~l~~~~a~ 247 (391)
T TIGR01328 169 DAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGK-AELLQQIRMVGIKDMTGSVISPFDAW 247 (391)
T ss_pred HHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcC-HHHHHHHHHHHHHhCCCCCCCcHHHH
Confidence 47899999999999999999999999999999999999999999999988654 5666666643 23457789999999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcC
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTK 157 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~ 157 (223)
+++++|+++..|++++++||+.+++||++||.|++|+||||++||+|+++++|++|+||||||++ ++.+++++|+++|+
T Consensus 248 l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~ 327 (391)
T TIGR01328 248 LILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLK 327 (391)
T ss_pred HHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 57788999999999
Q ss_pred cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 158 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 158 l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+|.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++
T Consensus 328 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 328 LIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDA 390 (391)
T ss_pred cceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999985
No 34
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=1e-58 Score=424.86 Aligned_cols=219 Identities=42% Similarity=0.716 Sum_probs=200.9
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChh------------------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------------ 56 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~------------------------ 56 (223)
+||++|+++|||||++++++++|+++|+|+|++|+||+++||++++||+++.++..
T Consensus 167 la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~ 246 (418)
T TIGR01326 167 VAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTE 246 (418)
T ss_pred HHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhh
Confidence 47899999999999999999999999999999999999999999999988743210
Q ss_pred -------HHHHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHH
Q 027424 57 -------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 129 (223)
Q Consensus 57 -------~~~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~ 129 (223)
+.+......+..|..++|+++|+++++++|+..||+++++||.++|+||.+||+|.+|+|||+++||+|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~ 326 (418)
T TIGR01326 247 TFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAK 326 (418)
T ss_pred hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 0011112345679999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh-CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCH
Q 027424 130 SQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV 207 (223)
Q Consensus 130 ~~~-~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~ 207 (223)
+|+ .|+||||||++ ++.+.+++|+++|++|..++||||++||+++|++++|+.+++++|++.||++++|||||||||+
T Consensus 327 ~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~ 406 (418)
T TIGR01326 327 KYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVGIENI 406 (418)
T ss_pred HhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecCCCH
Confidence 999 78999999999 6778899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 027424 208 NDLISDLDKALR 219 (223)
Q Consensus 208 ~dL~~dl~~Al~ 219 (223)
+|||+||+|||+
T Consensus 407 ~dl~~dl~~Al~ 418 (418)
T TIGR01326 407 DDIIADLEQALE 418 (418)
T ss_pred HHHHHHHHHhhC
Confidence 999999999985
No 35
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.5e-58 Score=420.04 Aligned_cols=217 Identities=47% Similarity=0.789 Sum_probs=206.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++||||||+++++.++|+++|+|++++|+|||++||+|+++|+++++++++.++++..+...|..++|+++|++
T Consensus 171 la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~ 250 (388)
T PRK07811 171 LAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLT 250 (388)
T ss_pred HHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999998999999999999999999999999999998888888888887777778989999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++|+++..|++++++||+.+++||++||.|++|+|||+++||+|+++++|++|+||||||++ ++.+.+.+|+++|++|
T Consensus 251 ~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~ 330 (388)
T PRK07811 251 LRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVF 330 (388)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5788899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
.+++||||++||+++|++++|+.++++ +.||++++|||||||||++|||+||+|||++
T Consensus 331 ~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 331 TLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred eeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 999999999999999999999999865 4599999999999999999999999999974
No 36
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=6.9e-58 Score=412.71 Aligned_cols=219 Identities=55% Similarity=0.914 Sum_probs=210.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++|+|||||++|++++|+++|+|+|++|+||+++||+|+++|+++++++++.++++..+..+|..++|.++|++
T Consensus 150 la~~~g~~livD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~ 229 (369)
T cd00614 150 LAHEHGALLVVDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLL 229 (369)
T ss_pred HHHHcCCEEEEECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999887757878888777788999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++|+++..|++++++|++++++||++||.|.+|+||++++||+|+++++|++|+|+|+||++ ++.+.+.+|+++|++|
T Consensus 230 l~~l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~ 309 (369)
T cd00614 230 LRGLKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLF 309 (369)
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 4788999999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
.+++||||++||+++|++++|+.+++++++..||++++|||||||||++|||+||+|||+
T Consensus 310 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 310 SLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999985
No 37
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-57 Score=412.40 Aligned_cols=220 Identities=44% Similarity=0.702 Sum_probs=208.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||+|+++|+.+.|+++|+||+++|+||+++||+|.++|+++. ++++.++++..+..+|.+++|.++|++
T Consensus 155 la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~~~l~~~~~~~g~~~~~~~a~~~ 233 (376)
T PRK06460 155 VCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAG-YGKLLNVIDQMRRTLGTSLDPHAAYLT 233 (376)
T ss_pred HHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEec-CHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4789999999999999998889999999999999999999999999998865 456778887777788888999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++++++..|++++++|+..+++||++||.|++|+||||++||+|+++++|++|+||||||++ ++.+.+.+|++++++|
T Consensus 234 l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~ 313 (376)
T PRK06460 234 LRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLI 313 (376)
T ss_pred HhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 5678899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||+||||+||+|||++.
T Consensus 314 ~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 314 IPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred eeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999864
No 38
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=3.2e-57 Score=412.84 Aligned_cols=220 Identities=40% Similarity=0.698 Sum_probs=206.2
Q ss_pred Ccccc--CCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--HHhcCCCCChHh
Q 027424 1 MAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFD 76 (223)
Q Consensus 1 ia~~~--g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--~~~~g~~~sp~d 76 (223)
+||++ |+++|||||+++++..+|+++|+||+++|+||+++||+++++|++++++ ++.++++.. +...|..++|++
T Consensus 174 la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~l~~~~~~~~~g~~l~p~~ 252 (400)
T PRK06234 174 IAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQVKLFGIKDMTGSVIGPFE 252 (400)
T ss_pred HHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecH-HHHHHHHHHHHHHhcCCCCCHHH
Confidence 36776 9999999999999999999999999999999999999999999987765 566766542 456788999999
Q ss_pred HHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhh
Q 027424 77 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVET 155 (223)
Q Consensus 77 a~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~ 155 (223)
+|+++++|+|+..|++++++||+++++||++||.|.+|+||+|++||+|+++++|++|+|||+||++ ++.+.+.+|+++
T Consensus 253 a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~ 332 (400)
T PRK06234 253 AFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNN 332 (400)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 567888999999
Q ss_pred cCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 156 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
|++|.+++||||++||+++|++++|..+++|+|++.||++++|||||||||++|||+||+|||+++
T Consensus 333 l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 333 VKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred CCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999864
No 39
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.2e-57 Score=410.86 Aligned_cols=221 Identities=49% Similarity=0.823 Sum_probs=212.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||+|+++|+.++|+++|+|++++|+||+++||+|+++|+++++++++.++++..+...|..++|+++|++
T Consensus 163 la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~ 242 (390)
T PRK08064 163 LAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLV 242 (390)
T ss_pred HHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999998888878888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++++|+..||+++++|+..+++||++||.|.+|+||+|++||+|+++++|++|+|||+||++++.+.+.+|+|++++|.
T Consensus 243 ~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~ 322 (390)
T PRK08064 243 LRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPV 322 (390)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999987888999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+++||||++||+++|++++|+.+++++|.+.||++++||+||||||++|||+||+|||+++
T Consensus 323 ~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 323 FAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred EcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999865
No 40
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=5.6e-57 Score=411.64 Aligned_cols=220 Identities=41% Similarity=0.737 Sum_probs=207.8
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH--HHHhcCCCCChHhHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQNAEGSGLAPFDCW 78 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~--~~~~~g~~~sp~da~ 78 (223)
+||++|++||||+|+++|+.++|+.+|+|++++|+||+++||+|+++|+++ .++++.++++. .+...|..++|+++|
T Consensus 175 la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~~~g~~~s~~~a~ 253 (403)
T PRK07503 175 IAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKDMTGAVMSPFDAF 253 (403)
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHhCcCCCCCHHHHH
Confidence 478999999999999999999999999999999999999999999999887 55667777763 356678899999999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcC
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTK 157 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~ 157 (223)
+++++|+++..|++++++||..+++||++||.|++|+||++++||+|+++++|+.|+|||+||++ ++.+.+.+|+++++
T Consensus 254 l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~ 333 (403)
T PRK07503 254 LLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQ 333 (403)
T ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 67788899999999
Q ss_pred cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 158 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 158 l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+|.+++|||++|||+++|.+++|+.+++|+|++.||++++|||||||||++|||+||+|||+++
T Consensus 334 l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~~ 397 (403)
T PRK07503 334 LFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDAC 397 (403)
T ss_pred cceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999865
No 41
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=2.6e-56 Score=402.45 Aligned_cols=203 Identities=47% Similarity=0.821 Sum_probs=194.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++||||||++|+.++|+++|||||++|+|||++||+|++||+|+++++++.++++..+...|..++|++||++
T Consensus 161 la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~ 240 (364)
T PRK07269 161 LAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLL 240 (364)
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999888888888888777788999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++|+||..|++++++||+++++||++||.|.+|+||| .|||+||++++.+++++|++++++|.
T Consensus 241 ~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~~~~~~~~f~~~l~~~~ 304 (364)
T PRK07269 241 MRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVADETRIPHILNSLKVFT 304 (364)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEECCHHHHHHHHHhCCcce
Confidence 99999999999999999999999999999999999996 49999999977888999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
+++|||+++||+++|++++|+.+++++|...||++++|||||||||++|||+||+|||+
T Consensus 305 ~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 305 FAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred EccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999996
No 42
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.6e-55 Score=401.00 Aligned_cols=215 Identities=31% Similarity=0.497 Sum_probs=201.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++|++|||+++|.+++|+++|+|++++|+|||++||+|+++|+++++++++.++++..+...|.+++|+++|++
T Consensus 175 ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~ 254 (394)
T PRK07050 175 AARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLV 254 (394)
T ss_pred HHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999888888888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC---CHHHHHHHHhhcC
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---SLALSKHVVETTK 157 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~---~~~~~~~f~~~l~ 157 (223)
+|+|+|+..||+++++||.+||+||++||.|.+|+||+|++||+|+++++|+.|+|+|++|+++ +.+.+++|+++++
T Consensus 255 lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~ 334 (394)
T PRK07050 255 LRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALE 334 (394)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999994 4688999999999
Q ss_pred cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 158 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 158 l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
++.+++||||++||++ |++++|...+ +.++.+++|||||||||+||||+||+|||+++
T Consensus 335 ~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 335 LFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEAA 392 (394)
T ss_pred CCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 9999999999999997 8888887653 23377899999999999999999999999864
No 43
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=5.6e-55 Score=396.24 Aligned_cols=214 Identities=44% Similarity=0.747 Sum_probs=200.9
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++|+||||+++|+.++|+++|+|++++|+|||++||++++||+++++++.+.+.++..+...|..++|+++|++
T Consensus 171 la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~ 250 (386)
T PRK06767 171 VAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLL 250 (386)
T ss_pred HHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999877655544445566778888999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l~ 159 (223)
+++|+|+..|++++.+|+..+++||++||+|++|+|| +|+++++|++++|||+||++ ++.+.+++|+++|++|
T Consensus 251 ~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~ 324 (386)
T PRK06767 251 LRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFI 324 (386)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999999 78999999999999999999 5678899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
.+++||||++||+++|++++|+.+++|+|++.||++++|||||||||++|||+||+|||++
T Consensus 325 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 325 TIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKK 385 (386)
T ss_pred EEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999985
No 44
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.4e-54 Score=391.24 Aligned_cols=209 Identities=38% Similarity=0.618 Sum_probs=194.4
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|+.++|+++|+|++++|+|||++||+++++|+++++++++.++++.++...|.+++|+++|++
T Consensus 157 ~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~ 236 (366)
T PRK07582 157 AAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLA 236 (366)
T ss_pred HHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 47889999999999999999999999999999999999999999999998877778888888888888999999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+|+|+|+..||+++++||+++++||++||+|++|+||||++||+|+++++|++|+||||||++++.+++.+|++++++|.
T Consensus 237 ~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~ 316 (366)
T PRK07582 237 HRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVV 316 (366)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
.++||||++||+.++.. ...++++++||+||||||++|||+||+|||++
T Consensus 317 ~~~s~G~~~sl~~~~~~-----------~~~~~~~~liR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 317 AATSFGGVHTSADRRAR-----------WGDAVPEGFVRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred ecccCCCccchhhhHHH-----------cCCCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999744321 12347899999999999999999999999986
No 45
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=1.8e-53 Score=390.24 Aligned_cols=219 Identities=29% Similarity=0.435 Sum_probs=202.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----HhcCCCCChHh
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGSGLAPFD 76 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----~~~g~~~sp~d 76 (223)
+||++|++||||||+ +++.++|+++|+||+++|+||+++||+++++|++++ ++++.++++..+ ...|..++|++
T Consensus 188 la~~~gi~livDea~-~~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~~~~g~~~~~~~ 265 (418)
T PLN02242 188 IAHEKGVTVVVDNTF-APMVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGALMLLGPTMNPKV 265 (418)
T ss_pred HHHHhCCEEEEECCC-CccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhhhccCCCCCHHH
Confidence 478999999999999 578889999999999999999999999999998875 456766666553 35688899999
Q ss_pred HHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh---CCCCeeEEEEeCCHHHHHHHH
Q 027424 77 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA---KGAGSVLSFLTGSLALSKHVV 153 (223)
Q Consensus 77 a~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~---~g~ggl~sf~~~~~~~~~~f~ 153 (223)
||+++++++|+..|++++++|+..+++||++|+ .+|+||||++||+|+++++|+ .|+||||||++++.+.+.+|+
T Consensus 266 A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~ 343 (418)
T PLN02242 266 AFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLM 343 (418)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999997 499999999999999999999 599999999998888999999
Q ss_pred hhcCcc----eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHhcCCC
Q 027424 154 ETTKYF----SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALRTGPL 223 (223)
Q Consensus 154 ~~l~l~----~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-~~dL~~dl~~Al~~~~~ 223 (223)
+++++| .+++|||+++||+++|++++|..+++|+|+..||++++||||||||| ++|||+||+|||+++.+
T Consensus 344 ~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl~~al~~~~~ 418 (418)
T PLN02242 344 RYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQFEKALSAMKL 418 (418)
T ss_pred HHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHHHHHHHHhhC
Confidence 999977 89999999999999999999999999999999999999999999995 99999999999998754
No 46
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-51 Score=374.30 Aligned_cols=215 Identities=33% Similarity=0.570 Sum_probs=196.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-HhcCCCCChHhHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWI 79 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~~~g~~~sp~da~l 79 (223)
+||++|++|+||||+++++.++|+++|+|+|++|+||+++||+|+++|+++.+ +++.++++... ...|..++|+++|+
T Consensus 172 la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~-~~~~~~l~~~~~~~~g~~~~~~~A~~ 250 (389)
T PRK05968 172 LAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGS-KEHIARINAEAYPYLGAKLSPFEAWL 250 (389)
T ss_pred HHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEEC-HHHHHHHHHHHHHhCCCCCChHHHHH
Confidence 47899999999999999998999999999999999999999999999988754 45666666543 35788899999999
Q ss_pred HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcc
Q 027424 80 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 159 (223)
Q Consensus 80 l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~ 159 (223)
++++|+++..|++++++||+++++||++||.|++|+||++++|| ++++.|+|||+||++++...+.+|+++|+++
T Consensus 251 ~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~-----~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~ 325 (389)
T PRK05968 251 LLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHP-----PAGLSGTSGLFSFIFREGIDVRAFADALKLF 325 (389)
T ss_pred HHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCh-----HHhCCCCceEEEEEECCHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999998 4567899999999996555789999999999
Q ss_pred eeccccCCCCCCCCCCccccCCC-CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCC
Q 027424 160 SITVSFGSVKSLISMPCFMSHAS-IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~-~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~ 222 (223)
.+++|||+++||++ |++++|.. ++++++++.||++++||+||||||++|||+||+|||+++.
T Consensus 326 ~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~~ 388 (389)
T PRK05968 326 RLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAAS 388 (389)
T ss_pred EEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHhh
Confidence 99999999999998 99999988 5588999999999999999999999999999999999764
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.2e-48 Score=352.45 Aligned_cols=205 Identities=46% Similarity=0.802 Sum_probs=193.8
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|+++|||||+++|++++|+++|+||+++|+|||++||+|+++|+++.+++++.+++...+...|..++|+++|++
T Consensus 161 la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~ 240 (366)
T PRK08247 161 IAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLL 240 (366)
T ss_pred HHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHH
Confidence 47899999999999999999999999999999999999999999999998876677878888778888889999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++|+|+..|++++++|+..+++||++||+|.+|+||+ .|||++|++++.+.+.+|++++++|.
T Consensus 241 ~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~~~~~~~~~~~l~~~~ 304 (366)
T PRK08247 241 IRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQDEEWVNPFLKSLKLIT 304 (366)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECCHHHHHHHHHcCCcce
Confidence 99999999999999999999999999999999999995 48999999977788899999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+++|||+++|++++|++++|+.+++++|...||++++|||||||||++|||+||+|||+++
T Consensus 305 ~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 305 FAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQV 365 (366)
T ss_pred EccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999874
No 48
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.69 E-value=3.6e-17 Score=151.62 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=88.9
Q ss_pred CccccCCEEEEecCC------------CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhH--------HHH
Q 027424 1 MAHAHGALLLVDNSI------------MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL--------AKE 60 (223)
Q Consensus 1 ia~~~g~~lvVDnT~------------~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~--------~~~ 60 (223)
+||++|++++||+|. .+|..++|+++|||+|++|.||+++|| ++|+++++++.+ .+.
T Consensus 240 la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp---~~G~i~g~~~~i~~l~~~~l~r~ 316 (454)
T TIGR00474 240 LGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP---QAGIIVGKKELIERLKKNPLTRA 316 (454)
T ss_pred HHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC---eEEEEEECHHHHHhhhhchhHHH
Confidence 489999999999983 235567899999999999999999999 689888776433 222
Q ss_pred HH-------HHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 61 LY-------FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 61 l~-------~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
++ .+...+|.+++|+++|+.+++|+|+..|++++++||+++++||++.
T Consensus 317 lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 317 LRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAA 371 (454)
T ss_pred HhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhh
Confidence 33 4456778889999999999999999999999999999999999875
No 49
>PRK04311 selenocysteine synthase; Provisional
Probab=99.57 E-value=2.3e-15 Score=139.96 Aligned_cols=105 Identities=22% Similarity=0.273 Sum_probs=85.4
Q ss_pred CccccCCEEEEec---------CC---CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH-----
Q 027424 1 MAHAHGALLLVDN---------SI---MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----- 63 (223)
Q Consensus 1 ia~~~g~~lvVDn---------T~---~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~----- 63 (223)
+||++|++++||+ |+ ..|..++|+++|||+|++|.+|+++|| ++|++++++ ++.++++.
T Consensus 245 lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp---~~G~i~g~~-~li~~l~~~~~~r 320 (464)
T PRK04311 245 LGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP---QAGIIVGKK-ELIARLKKHPLKR 320 (464)
T ss_pred HHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC---ceEEEEEcH-HHHHHHhhchhHH
Confidence 4899999999999 44 356667899999999999999999999 689887764 45454441
Q ss_pred -H----------HHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 64 -L----------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 64 -~----------~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
+ ...++..++|++++..+++++++..|++++.+||+++++||++|+
T Consensus 321 ~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 321 ALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAAL 377 (464)
T ss_pred HHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 1 223455567788888888999999999999999999999999986
No 50
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.33 E-value=3.6e-12 Score=116.74 Aligned_cols=100 Identities=25% Similarity=0.365 Sum_probs=73.7
Q ss_pred CccccCCEEEEecCCCCCCCcCc-----ccCCCc-------EEEecccccccCCcccceeEEEecChh-H-HHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-----LELGAD-------IVMHSATKFIAGHSDVMAGVLAVKGER-L-AKELYFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-----l~~GAD-------ivv~S~tK~l~G~~d~~~G~v~~~~~~-~-~~~l~~~~~ 66 (223)
+||++|++|+||++||+++.+.+ +.+||| +|++|+||+++ +.+|+++++.++++ + .+++.....
T Consensus 192 ~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~ 269 (417)
T PF01276_consen 192 ICHKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALS 269 (417)
T ss_dssp HHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHH
T ss_pred HhcccCCEEEEEccccccccCCCCccchhhccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHH
Confidence 47999999999999999876654 558999 99999999999 88999999999876 4 466777666
Q ss_pred hcCCCCChHhHHHHHhcHHHHHHHH---------HHHHhHHHHHHHHH
Q 027424 67 AEGSGLAPFDCWICLRGVKTMALRV---------EKQQDNAQKIAEFL 105 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~tl~~R~---------~~~~~na~~la~~L 105 (223)
+++ +.|| +|+++.||+.....| ++..+++..+.+.+
T Consensus 270 ~~~-TTSP--SY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i 314 (417)
T PF01276_consen 270 MHQ-TTSP--SYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKI 314 (417)
T ss_dssp HHS--SS----HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHc-CCCh--HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 766 6799 999999999854333 44556666666666
No 51
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.23 E-value=3.1e-10 Score=103.59 Aligned_cols=185 Identities=15% Similarity=0.173 Sum_probs=112.6
Q ss_pred CccccCCEEEEecCCCCCCC------------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--HH
Q 027424 1 MAHAHGALLLVDNSIMSPVL------------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--~~ 66 (223)
+|+++|++++|||+++.+.. ..|.. |+||++.|+||+++ .+||+++++ +++.+.++.. ..
T Consensus 163 l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~-~~Div~~slsk~~g----~~gg~v~~~-~~~~~~~~~~~~~~ 236 (392)
T PLN03227 163 LKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMV-HAEIVTFSLENAFG----SVGGMTVGS-EEVVDHQRLSGSGY 236 (392)
T ss_pred HHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCC-CceEEEeechhhhh----ccCcEEecC-HHHHHHHHHhCcCc
Confidence 47899999999999975543 24544 89999999999986 467877544 4554444322 22
Q ss_pred hcCCCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHh--cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 67 AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLA--SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~--~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
.+|..++|..++.....++.. ..+.++..+++..+.+.|+ .+|.|..|.- ++.-. ....|.++.|
T Consensus 237 ~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg-~~~~~---------~~~~~~i~~i 306 (392)
T PLN03227 237 CFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRN-RLVIT---------SDPISPIIYL 306 (392)
T ss_pred cccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccccccc-ccccC---------CCCCCCEEEE
Confidence 456666787777666666543 3567888889999999887 4555555542 22100 0235789999
Q ss_pred EeCCHHHH---------HHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----
Q 027424 142 LTGSLALS---------KHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---- 205 (223)
Q Consensus 142 ~~~~~~~~---------~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE---- 205 (223)
++++.... .+|.+.+ .++-. ..|.. ..+..| -+++..||+++-..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~--~~~~~-~~~~~~----------------~~P~~~iR~~~~~~~t~e 367 (392)
T PLN03227 307 RLSDQEATRRTDETLILDQIAHHSLSEGVAVV--STGGH-VKKFLQ----------------LVPPPCLRVVANASHTRE 367 (392)
T ss_pred EeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEE--ecccc-cCCcCC----------------CCCCceEEEEecCCCCHH
Confidence 99653221 2444333 23321 11211 111111 13567899999754
Q ss_pred CHHHHHHHHHHHHhc
Q 027424 206 DVNDLISDLDKALRT 220 (223)
Q Consensus 206 d~~dL~~dl~~Al~~ 220 (223)
|.+.+++.|+++++.
T Consensus 368 ei~~~~~~l~~~~~~ 382 (392)
T PLN03227 368 DIDKLLTVLGEAVEA 382 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566677777777654
No 52
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=3.8e-10 Score=101.44 Aligned_cols=185 Identities=22% Similarity=0.218 Sum_probs=125.8
Q ss_pred CccccCCEEEEecCC-----CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSI-----MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~-----~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
||++.|++|++|-++ +++.+++|+++ ||||..|+||+|.|+ +||++.++++++.+++...- ..|.--.|.
T Consensus 189 Iad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTlrGP---rGG~Il~~~eel~kkin~aV-FPg~qggpl 263 (413)
T COG0112 189 IADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTLRGP---RGGIILTNDEELAKKINSAV-FPGLQGGPL 263 (413)
T ss_pred HHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCCCCC---CceEEEeccHHHHHHhhhhc-CCccCCChH
Confidence 588999999999995 56778999998 999999999999999 79999998888888776531 223222453
Q ss_pred hHHHHHhc--HH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----
Q 027424 76 DCWICLRG--VK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---- 144 (223)
Q Consensus 76 da~ll~~~--l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~---- 144 (223)
---....+ ++ .+..+.++..+||+.||+.|.++.. +|.- |.. .+| ++-+++.
T Consensus 264 ~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~--~vvs-GgT--dnH------------l~lVDl~~~~~ 326 (413)
T COG0112 264 MHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGF--KVVS-GGT--DNH------------LVLVDLRSKGL 326 (413)
T ss_pred HHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCC--eEec-CCc--cce------------EEEEEcccCCC
Confidence 22221111 11 1356778999999999999998763 3332 322 222 4444442
Q ss_pred CHHHHHHHHhhcCcceeccccCCC-CCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 145 SLALSKHVVETTKYFSITVSFGSV-KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 145 ~~~~~~~f~~~l~l~~~~~s~G~~-~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+-..+.+.+++.++.-....+... ++ |..++- .+.| ++.+.|..+|-++.+++.+-+..+|+.
T Consensus 327 ~Gk~ae~~L~~~~It~NKN~iP~D~~~----p~~tSG--------IRiG-tpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 327 TGKKAEAALERAGITVNKNAIPFDPES----PFVTSG--------IRIG-TPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CHHHHHHHHHHcCEeeccCCCCCCCCC----CCCCcc--------ceec-cHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 335677788888887665555432 22 222211 2345 677888889988998888888888874
No 53
>PRK15029 arginine decarboxylase; Provisional
Probab=99.19 E-value=4.4e-11 Score=116.64 Aligned_cols=104 Identities=12% Similarity=0.098 Sum_probs=79.7
Q ss_pred CccccCCEEEEecCCCCCCCc-------Ccc-----c-CCCc-EEEecccccccCCcccceeEEEecCh--hHH-HHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPL-----E-LGAD-IVMHSATKFIAGHSDVMAGVLAVKGE--RLA-KELYF 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl-----~-~GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~--~~~-~~l~~ 63 (223)
+||++|++|+||++||+++.+ .++ . .||| +||+|+||+++ +.+|+.+++.+++ .+. +++..
T Consensus 336 ~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~--alTQaS~LHv~~~~~~id~~r~~~ 413 (755)
T PRK15029 336 LLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQ 413 (755)
T ss_pred HHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhccc--chhhhhhheeCCCccccCHHHHHH
Confidence 379999999999999997532 455 4 7999 99999999999 8899999999775 333 56777
Q ss_pred HHHhcCCCCChHhHHHHHhcHHHHHHHHH---------HHHhHHHHHHHHHhcCC
Q 027424 64 LQNAEGSGLAPFDCWICLRGVKTMALRVE---------KQQDNAQKIAEFLASHP 109 (223)
Q Consensus 64 ~~~~~g~~~sp~da~ll~~~l~tl~~R~~---------~~~~na~~la~~L~~~p 109 (223)
...+++ +.|| +|+++.||+.....|+ +..+.+..+.+.+++-+
T Consensus 414 ~l~~~q-STSP--SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 414 AYMMHA-TTSP--LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHc-CCCc--HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 777777 6799 9999999998654443 34556666666665543
No 54
>PLN02721 threonine aldolase
Probab=99.10 E-value=1.8e-09 Score=95.74 Aligned_cols=173 Identities=17% Similarity=0.185 Sum_probs=105.1
Q ss_pred CccccCCEEEEecCCC--C----CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIM--S----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~--s----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++++|+++. . +.....+..++|.++.|+||++++. .||+++ .++++.+.+.......+..++.
T Consensus 166 l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T PLN02721 166 LAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAP---VGSVIV-GSKSFIRKAKRLRKTLGGGMRQ 241 (353)
T ss_pred HHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCc---eeeEEe-cCHHHHHhHHHHHHhcCCCeeh
Confidence 4789999999999853 2 1112223348999999999999875 455454 4556666665555544433322
Q ss_pred --HhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH--HHHH
Q 027424 75 --FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSK 150 (223)
Q Consensus 75 --~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--~~~~ 150 (223)
..++....++++...++++..+++..+.+.|++.+.+..-.+| | .++++.|.+... ....
T Consensus 242 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~-----------~~~~~~~~~~~~~~~~~~ 305 (353)
T PLN02721 242 VGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAA-----V-----------ETNIVYFDITDGSRITAE 305 (353)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCC-----c-----------cceEEEEEccCCccccHH
Confidence 2344445567776677877788899999999988776320222 1 256788877321 1234
Q ss_pred HHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhc
Q 027424 151 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 220 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~ 220 (223)
.|.+.|.--.+.+. |. .++.||++++ -||.+.+++.|++++++
T Consensus 306 ~~~~~L~~~gi~v~----------~~-----------------~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 306 KLCKSLEEHGVLLM----------PG-----------------NSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred HHHHHHHhCCcEEe----------cC-----------------CCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 45444431111111 11 2357999997 34567788888777764
No 55
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.09 E-value=2.1e-10 Score=111.19 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=79.7
Q ss_pred ccccCCEEEEecCCCCCCCcCc---------ccCCCc----EEEecccccccCCcccceeEEEecChhH--------HHH
Q 027424 2 AHAHGALLLVDNSIMSPVLSRP---------LELGAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKE 60 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~p---------l~~GAD----ivv~S~tK~l~G~~d~~~G~v~~~~~~~--------~~~ 60 (223)
+|.++ +|+||++|++++.+.| +++||| +|++|+||+++ +.+|+.+++.+++.+ .++
T Consensus 308 ~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~LHvk~~~i~g~~~~v~~~r 384 (720)
T PRK13578 308 GHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQIHKKDNHIKGQARYCPHKR 384 (720)
T ss_pred hccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhhhhcCCcccccccccCCHHH
Confidence 67788 9999999999876666 578999 99999999999 778999999977543 256
Q ss_pred HHHHHHhcCCCCChHhHHHHHhcHHHHHHHH---------HHHHhHHHHHHHHH-hcCCCe
Q 027424 61 LYFLQNAEGSGLAPFDCWICLRGVKTMALRV---------EKQQDNAQKIAEFL-ASHPRV 111 (223)
Q Consensus 61 l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~---------~~~~~na~~la~~L-~~~p~v 111 (223)
+.....+++ +.|| +|+++.||+.....| ++..+.+..+.+.+ +..+.+
T Consensus 385 ~~~al~m~q-STSP--sY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~ 442 (720)
T PRK13578 385 LNNAFMLHA-STSP--FYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLI 442 (720)
T ss_pred HHHHHHHHc-CCCh--HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 666666666 6799 999999999854333 44566666666666 555544
No 56
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.09 E-value=6.1e-09 Score=95.80 Aligned_cols=103 Identities=23% Similarity=0.274 Sum_probs=70.3
Q ss_pred CccccCCEEEEecCCC-----CCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC---CCC
Q 027424 1 MAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG---SGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~-----s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g---~~~ 72 (223)
+||++|++|+||+|++ .+..+.|+. ++|+++.|++|+++|+. ||+++++++.+.+.++.. ...| ...
T Consensus 191 la~~~g~~livD~Aha~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~-~~~~~~~~~~ 265 (416)
T PRK13034 191 IADEVGALLMVDMAHIAGLVAAGEHPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSA-VFPGLQGGPL 265 (416)
T ss_pred HHHHcCCEEEEeCcccccCcccCCCCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhh-cCCcccCCcc
Confidence 4789999999999954 444456665 69999999999998874 888877776665554432 1222 123
Q ss_pred ChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~ 108 (223)
.|..+.+....++.+ ..+.++..+|+..+++.|++.
T Consensus 266 ~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 266 MHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER 305 (416)
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 334444433333333 234688899999999999876
No 57
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.09 E-value=3.4e-09 Score=95.33 Aligned_cols=167 Identities=17% Similarity=0.255 Sum_probs=103.6
Q ss_pred ccccCCEEEEecCCCCCC----CcC-cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 2 AHAHGALLLVDNSIMSPV----LSR-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~----~~~-pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
|+++|++|+||++++.++ ... ...+|+|+++.|++|.++|. .+|+++++ +++.+.+......++.+++|..
T Consensus 164 a~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~---r~G~v~~~-~~li~~l~~~~~~~~~s~~~~~ 239 (346)
T TIGR03576 164 AKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGP---RGGLLAGR-KELVDKIKSVGEQFGLEAQAPL 239 (346)
T ss_pred HHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhcccc---ceEEEEeC-HHHHHHHHHhhcCcccCccHHH
Confidence 678999999999998753 222 24568899999999998776 47888765 5677777766655555567767
Q ss_pred HHHHHhcHHHHH-HHH-HHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC---CHHHHHH
Q 027424 77 CWICLRGVKTMA-LRV-EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---SLALSKH 151 (223)
Q Consensus 77 a~ll~~~l~tl~-~R~-~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~---~~~~~~~ 151 (223)
.+....+|+.+. .++ +...++...+.+.+++ + .| +|. .++.+-+.+. +.+.+.+
T Consensus 240 ~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~---~-~~-~~~----------------~~~f~~~~~~~~~~~~~~~~ 298 (346)
T TIGR03576 240 LAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK---L-NV-ERT----------------PTGFVIKGVEEEKLIEIGLD 298 (346)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh---C-CC-CcC----------------CCeEEEEeCCCCCHHHHHHH
Confidence 777888887642 222 3334444444445542 2 22 231 2334444453 2355666
Q ss_pred HHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-----HHHHHHHHHHHH
Q 027424 152 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-----VNDLISDLDKAL 218 (223)
Q Consensus 152 f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-----~~dL~~dl~~Al 218 (223)
+++.-++.-. |.+ .+ .+ .++.+|||+|.++ .+-+++-|++.|
T Consensus 299 ll~~~gV~v~-------------~~~--~f---------~~-~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 299 LLRNYGIITI-------------TAV--GM---------PG-ASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHhCCEEEe-------------CCc--cc---------CC-CCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 6666555421 111 00 01 2568999999887 677888777665
No 58
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.04 E-value=6.8e-09 Score=90.90 Aligned_cols=110 Identities=19% Similarity=0.140 Sum_probs=75.4
Q ss_pred CccccCCEEEEecCCCCCCC--------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL--------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+||++|++++||++++.... ..+...+.|+++.|++|+++.. ....|+++++++++.+.++......+...
T Consensus 160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~-g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
T cd00609 160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLP-GLRIGYLIAPPEELLERLKKLLPYTTSGP 238 (350)
T ss_pred HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCc-ccceEEEecCHHHHHHHHHHHHHhcccCC
Confidence 47899999999999865321 2344567899999999999722 24567787766567676666555443445
Q ss_pred ChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 73 APFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 73 sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v 111 (223)
++...+.+...++.. ....++..+++..+.+.|++++..
T Consensus 239 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 281 (350)
T cd00609 239 STLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPL 281 (350)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 555555555555543 333466788889999999988753
No 59
>PLN02271 serine hydroxymethyltransferase
Probab=99.01 E-value=3.8e-09 Score=99.75 Aligned_cols=188 Identities=18% Similarity=0.166 Sum_probs=119.8
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCcEEEecccccccCCcccceeEEEecCh-------------------h
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------------------R 56 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~-------------------~ 56 (223)
||+++|++++||.++.+++ .++|+. +||+|+.|+||++.|+ .||++.++++ +
T Consensus 321 IAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGP---rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d 396 (586)
T PLN02271 321 IADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSLRGP---RGGIIFYRKGPKLRKQGMLLSHGDDNSHYD 396 (586)
T ss_pred HHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccCCCC---CceEEEecccccccccCCccccccccccHH
Confidence 5889999999999986654 357887 6999999999999999 5788877653 1
Q ss_pred HHHHHHHHHHhcCCCCChHhHH--HHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHH
Q 027424 57 LAKELYFLQNAEGSGLAPFDCW--ICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 129 (223)
Q Consensus 57 ~~~~l~~~~~~~g~~~sp~da~--ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~ 129 (223)
+.+++.... ..|..-+|...- -+..+++ .+....++..+||++||+.|.++.. +|.. |- +..|.++.
T Consensus 397 ~~~kI~~aV-fPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~--~vv~-gg--TdnHlvLv 470 (586)
T PLN02271 397 FEEKINFAV-FPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKC--RLVT-GG--TDNHLLLW 470 (586)
T ss_pred HHHHhhccc-CCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCC--eEee-CC--CCcceeee
Confidence 223332211 112222332221 2233344 2466789999999999999988753 3443 22 34455443
Q ss_pred hhhCCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 027424 130 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 209 (223)
Q Consensus 130 ~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~d 209 (223)
.. +..| + +-..+++.++..++......+.+.++-.... -.+.| ++.+.|...+-+|.+.
T Consensus 471 Dl-~~~g------~-~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~ps------------GiRiG-T~alT~rG~~e~d~~~ 529 (586)
T PLN02271 471 DL-TTLG------L-TGKNYEKVCEMCHITLNKTAIFGDNGTISPG------------GVRIG-TPAMTSRGCLESDFET 529 (586)
T ss_pred cC-cccC------C-CHHHHHHHHHHcCeEeccccCCCCCCCCCCC------------ccccc-CHHHHhcCCCcHHHHH
Confidence 32 2122 1 3356788899988887666666543322111 02344 6667777788888888
Q ss_pred HHHHHHHHHh
Q 027424 210 LISDLDKALR 219 (223)
Q Consensus 210 L~~dl~~Al~ 219 (223)
+.+-+.++++
T Consensus 530 iA~~i~~~~~ 539 (586)
T PLN02271 530 IADFLLRAAQ 539 (586)
T ss_pred HHHHHHHHHh
Confidence 8888888876
No 60
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.01 E-value=6.8e-09 Score=92.01 Aligned_cols=196 Identities=17% Similarity=0.186 Sum_probs=118.0
Q ss_pred CccccCCEEEEecCCCCCCCc--CcccCCCcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~pl~~GADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|+++|+|++.+.+... +++...+|+++.|++ |++++. .||+++.+++++.++++.....
T Consensus 128 l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (352)
T cd00616 128 IAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKY 204 (352)
T ss_pred HHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCcc
Confidence 478999999999997654322 223334799999966 999643 3787877776776666544321
Q ss_pred ------cCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 68 ------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 68 ------~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
....+++..+.+.+..++.+..+.++..+|++.+.+.|++.|+++ +..|. .. ......+++|
T Consensus 205 ~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~--~~---------~~~~~~~~~~ 272 (352)
T cd00616 205 EHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKELLADLPGIR-LPDVP--PG---------VKHSYHLYVI 272 (352)
T ss_pred ccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCcc-CCCCC--CC---------CceeeEEEEE
Confidence 122367778888888888888888999999999999999988763 33331 10 0113568888
Q ss_pred EeC-----CHHHHHHHHhhcCcceeccccCCCCCCCCCCcccc----C-CCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 027424 142 LTG-----SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS----H-ASIPVEVRQARGLTEDLVRISVGIEDVNDLI 211 (223)
Q Consensus 142 ~~~-----~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~----h-~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~ 211 (223)
.+. +.+...+.+..-++. .+..+- .++..+.... + ..++... -+..+.||+|++.-..++=+
T Consensus 273 ~~~~~~~~~~~~v~~~L~~~gI~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~----~~~~~~l~l~~~~~~t~~di 344 (352)
T cd00616 273 RLDPEAGESRDELIEALKEAGIE-TRVHYP---PLHHQPPYKKLLGYPPGDLPNAE----DLAERVLSLPLHPSLTEEEI 344 (352)
T ss_pred EECCcCCCCHHHHHHHHHHCCCC-eeeecC---ccccCHhhhhccCCCcCCChHHH----HHHhCeEEccCCCCCCHHHH
Confidence 874 234444445444442 221111 0000000000 0 0111111 12357899999987766666
Q ss_pred HHHHHHHh
Q 027424 212 SDLDKALR 219 (223)
Q Consensus 212 ~dl~~Al~ 219 (223)
+.+.++|+
T Consensus 345 ~~i~~~l~ 352 (352)
T cd00616 345 DRVIEALR 352 (352)
T ss_pred HHHHHHhC
Confidence 66666653
No 61
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.99 E-value=9.1e-09 Score=96.33 Aligned_cols=187 Identities=17% Similarity=0.167 Sum_probs=115.7
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCcEEEecccccccCCcccceeEEEecChh-------------HHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-------------LAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-------------~~~~l~ 62 (223)
+||++|++++||.+++.++. ..|++ ++|+++.|++|++.|+ .||++.++++. +.+.+.
T Consensus 206 ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-~~Div~~t~hK~L~GP---~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~ 281 (475)
T PLN03226 206 IADKVGALLMCDMAHISGLVAAQEAASPFE-YCDVVTTTTHKSLRGP---RGGMIFFRKGPKPPKGQGEGAVYDYEDKIN 281 (475)
T ss_pred HHHHcCCEEEEEchhhhCcccCCCCCCCCC-CCeEEEecCcccccCC---CceEEEEchhhcccccCCCccHHHHHHHhc
Confidence 58999999999999876653 35666 7999999999999887 47878776531 111111
Q ss_pred HHH-HhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCC
Q 027424 63 FLQ-NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 136 (223)
Q Consensus 63 ~~~-~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g 136 (223)
... ..++.+++|...+-+..+++-+ ..+.++..+|+..+++.|++. ++ +|..++-++ .=
T Consensus 282 ~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~-~l~~~~t~~-------------hi 346 (475)
T PLN03226 282 FAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GY-KLVTGGTDN-------------HL 346 (475)
T ss_pred cccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CC-EEEcCCCCC-------------CE
Confidence 110 1123345566666677777765 345788999999999999884 43 555443211 11
Q ss_pred eeEEEEe-C-CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 027424 137 SVLSFLT-G-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 214 (223)
Q Consensus 137 gl~sf~~-~-~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl 214 (223)
.+++|.. + +...+.+.++..++......+.+..+-+..|. -+.| ++.+.|..++.||.+.+.+-|
T Consensus 347 ~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~g------------iRiG-t~~lt~~g~~~~d~~~ia~~i 413 (475)
T PLN03226 347 VLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGG------------VRIG-TPAMTSRGLVEKDFEKVAEFL 413 (475)
T ss_pred EEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCC------------cccC-cHHHHHCCCCHHHHHHHHHHH
Confidence 2333321 2 44557777887777644333333222221111 1223 444566677778888888888
Q ss_pred HHHHh
Q 027424 215 DKALR 219 (223)
Q Consensus 215 ~~Al~ 219 (223)
.++|+
T Consensus 414 ~~~~~ 418 (475)
T PLN03226 414 HRAVT 418 (475)
T ss_pred HHHHH
Confidence 88887
No 62
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.98 E-value=2.1e-08 Score=91.70 Aligned_cols=146 Identities=21% Similarity=0.198 Sum_probs=90.8
Q ss_pred CccccCCEEEEecCC-----CCCCCcCcccCCCcEEEecccccccCCcccceeEEEec-------------ChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSI-----MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVK-------------GERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~-----~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~-------------~~~~~~~l~ 62 (223)
||++.|+.|++|-++ ++...++|+++ ||||..|+||+|.|+ +||+|.+| ++++.+++.
T Consensus 192 Iad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKtl~GP---rggiI~~~~~~~~~~~~~~~~~~~l~~~I~ 267 (399)
T PF00464_consen 192 IADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKTLRGP---RGGIILTNKGSKNVDKKGKEIDEELAEKID 267 (399)
T ss_dssp HHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGGG-SS---S-EEEEES-SEEEE-TTS-EEEHHHHHHHH
T ss_pred HHHhcCcEEEecccccccceehheecCcccc-ceEEEeecccccccc---CceEEEEcCCccccCCcccccHHHHHHHhc
Confidence 578999999999996 45678999996 999999999999999 79999988 456777776
Q ss_pred HHHHhcCCCCChHhHH--HHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCC
Q 027424 63 FLQNAEGSGLAPFDCW--ICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 135 (223)
Q Consensus 63 ~~~~~~g~~~sp~da~--ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ 135 (223)
... ..|..-+|.... -+.-+++ .+....++..+||+.||+.|++... +|.. |. +..|
T Consensus 268 ~av-fP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~--~v~~-gg--Td~H---------- 331 (399)
T PF00464_consen 268 SAV-FPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGF--KVVT-GG--TDNH---------- 331 (399)
T ss_dssp HHH-TTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT---EEGG-GS---SSS----------
T ss_pred ccc-CCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCc--EEEE-CC--CCCC----------
Confidence 532 223222342211 1222222 2467789999999999999999864 5554 21 2223
Q ss_pred CeeEEEEe---C-CHHHHHHHHhhcCcceeccccCCC
Q 027424 136 GSVLSFLT---G-SLALSKHVVETTKYFSITVSFGSV 168 (223)
Q Consensus 136 ggl~sf~~---~-~~~~~~~f~~~l~l~~~~~s~G~~ 168 (223)
++-+++ + +-..+.++++..+++.....+.+.
T Consensus 332 --~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d 366 (399)
T PF00464_consen 332 --QVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGD 366 (399)
T ss_dssp --EEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTT
T ss_pred --eEEEEecccccchHHHHHHHHhcCeeecccccCCC
Confidence 444444 1 335678889999988665555443
No 63
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.97 E-value=2.1e-08 Score=93.08 Aligned_cols=179 Identities=16% Similarity=0.168 Sum_probs=109.6
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-----HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-----NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-----~~~g~ 70 (223)
+||++|++++||.+++.+.. ..|+. |+|+++.|+||++.|+. ||.+.++++ +.+.+.... ..+..
T Consensus 205 i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-~~D~l~~S~hK~l~GP~---Gg~l~~~~~-~~~~l~~~~~~~~~p~~~G 279 (452)
T PTZ00094 205 ICDSVGAYLMADIAHTSGLVAAGVLPSPFP-YADVVTTTTHKSLRGPR---SGLIFYRKK-VKPDIENKINEAVFPGLQG 279 (452)
T ss_pred HHHHcCCEEEEeccchhccccCCCCCCCCC-CCcEEEcCCccCCCCCC---ceEEEEecc-cchHHHHhhccccCCCCCC
Confidence 47899999999999877654 45665 89999999999999874 677767653 222221110 01111
Q ss_pred CCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-
Q 027424 71 GLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG- 144 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~- 144 (223)
+.++...+-+..+++-+ ..+.++..+++..+++.|++. ++ +|..|+-. .| -.+++|...
T Consensus 280 ~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~-~v~~~~~~---~~----------~~~v~~~~~~ 344 (452)
T PTZ00094 280 GPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GY-DLVTGGTD---NH----------LVLVDLRPFG 344 (452)
T ss_pred CchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-Cc-EEecCCCC---Cc----------eEeecCCcCC
Confidence 34444455566666665 234577788999999999774 33 55555311 11 245555442
Q ss_pred -CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe--------cCCCHHHHHHHHH
Q 027424 145 -SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--------GIEDVNDLISDLD 215 (223)
Q Consensus 145 -~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv--------GlEd~~dL~~dl~ 215 (223)
+.+.+.+.++..+++. +. .. .|+. .....++.||+|. +-||++.|.+-|.
T Consensus 345 ~~~~~~~~~L~~~gI~v---s~----~~--~p~~------------~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 345 ITGSKMEKLLDAVNISV---NK----NT--IPGD------------KSALNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred CCHHHHHHHHHHCCcEE---ec----cc--CCCC------------CcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 3455666666666552 21 10 1111 0011356899998 4688999999999
Q ss_pred HHHhc
Q 027424 216 KALRT 220 (223)
Q Consensus 216 ~Al~~ 220 (223)
+++..
T Consensus 404 ~~~~~ 408 (452)
T PTZ00094 404 RAVKL 408 (452)
T ss_pred HHHHH
Confidence 88863
No 64
>PRK07179 hypothetical protein; Provisional
Probab=98.96 E-value=2.1e-08 Score=91.48 Aligned_cols=174 Identities=20% Similarity=0.263 Sum_probs=105.3
Q ss_pred CccccCCEEEEecCCCCCCC-------cCc--ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--HhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~p--l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~g 69 (223)
+|+++|++++||++++-... +.. +..++|+++.|++|.++|. +|+++++ +++.+.+.... ...+
T Consensus 206 l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~----~G~l~~~-~~~~~~~~~~~~~~~~~ 280 (407)
T PRK07179 206 IAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGR----AGIITCP-RELAEYVPFVSYPAIFS 280 (407)
T ss_pred HHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhcc----CeEEEeC-HHHHHHHHHhCcCeeeC
Confidence 47899999999999853221 112 2235799999999999864 6777665 45555443322 1244
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
.+..|..+..+...++.+ ..+.++..++...+.+.|++. ++ .|+ +.|.++.|+++..
T Consensus 281 ~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~------------------~~~~i~~l~~~~~ 340 (407)
T PRK07179 281 STLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GY-NIR------------------SESQIIALETGSE 340 (407)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC-CCC------------------CCCCEEEEEeCCH
Confidence 555665555444555543 356678888888888888765 22 111 2467888888543
Q ss_pred HHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 147 ALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 147 ~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
.....+.+.| +++ + +.++.|.. .-.++.||||++. ||.+.+++-|+++++
T Consensus 341 ~~~~~~~~~L~~~GI~------~---~~~~~p~~--------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~ 397 (407)
T PRK07179 341 RNTEVLRDALEERNVF------G---AVFCAPAT--------------PKNRNLIRLSLNADLTASDLDRVLEVCREARD 397 (407)
T ss_pred HHHHHHHHHHHHCCce------E---eeecCCCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 3334443333 333 1 11122211 0125789999997 677888888888777
Q ss_pred cCC
Q 027424 220 TGP 222 (223)
Q Consensus 220 ~~~ 222 (223)
...
T Consensus 398 ~~~ 400 (407)
T PRK07179 398 EVD 400 (407)
T ss_pred hhC
Confidence 543
No 65
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=98.91 E-value=5.2e-08 Score=88.36 Aligned_cols=187 Identities=20% Similarity=0.202 Sum_probs=103.0
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH---------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--------------- 64 (223)
+||++|++++||.+++.+.. .+.-++|+|+++.|++|+++..+ .|++..++ ++.+.+...
T Consensus 184 ~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~g~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 259 (403)
T TIGR01979 184 LAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTG---IGVLYGKE-ELLEQMPPFLGGGEMIAEVSFEET 259 (403)
T ss_pred HHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCC---ceEEEEch-HHHhcCCCeecCCCceeecccCcc
Confidence 47899999999999876543 34445799999999999886443 56676654 343333210
Q ss_pred ------HHhcCCCCChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 65 ------QNAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 65 ------~~~~g~~~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
.+....+.+....+-+..+++-+. ...++..+.+..+.+.|++.|.+ ++..|.- + .
T Consensus 260 ~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~-~~~~~~~---~---------~ 326 (403)
T TIGR01979 260 TYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGL-RIYGPRD---A---------E 326 (403)
T ss_pred ccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE-EEeCCCC---c---------c
Confidence 000011222222333444544432 22355566667777778777775 5654521 1 0
Q ss_pred CCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHH
Q 027424 134 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 209 (223)
Q Consensus 134 g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~d 209 (223)
..+++++|.+.+.. ...+.+.|+-..+.++-|..-+ .| ....+| .++.+|+|+|. ||++.
T Consensus 327 ~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~---~~-----------~~~~~~-~~~~iRiS~~~~~t~~di~~ 390 (403)
T TIGR01979 327 DRGGIISFNVEGVH-PHDVGTILDEEGIAVRSGHHCA---QP-----------LMRRFG-VPATCRASFYIYNTEEDIDA 390 (403)
T ss_pred ccCceEEEEeCCcC-HHHHHHHHhhCCEEEcchhhhh---HH-----------HHHHhC-CCCEEEEEeccCCCHHHHHH
Confidence 13689999874321 2233333333222233332100 01 112234 34789999996 57777
Q ss_pred HHHHHHHHHhc
Q 027424 210 LISDLDKALRT 220 (223)
Q Consensus 210 L~~dl~~Al~~ 220 (223)
|++-|++.++.
T Consensus 391 l~~~l~~~~~~ 401 (403)
T TIGR01979 391 LVEALKKVRKF 401 (403)
T ss_pred HHHHHHHHHHH
Confidence 77777766543
No 66
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=98.91 E-value=4.3e-08 Score=87.92 Aligned_cols=111 Identities=22% Similarity=0.226 Sum_probs=76.1
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--------hcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--------AEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--------~~g~~ 71 (223)
+||++|++++||++++.+.. +.+.++|+|+++.|+||+++++. .+|+++++ +++.+++..... ..|.+
T Consensus 164 ~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~--~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~ 240 (361)
T cd06452 164 VCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASA--PIGVLATT-EEWADIVFRTSQMFKIKEVELLGCT 240 (361)
T ss_pred HHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCC--CeEEEEEC-HHHHHHHhccccccccceeeeeccc
Confidence 47889999999999976542 55667899999999999998553 46777665 456565543221 22333
Q ss_pred CChHhHHHHHhcHHHHHHH---HHHHHhHHHHHHHHHhcCCCeeEEE
Q 027424 72 LAPFDCWICLRGVKTMALR---VEKQQDNAQKIAEFLASHPRVKKVN 115 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R---~~~~~~na~~la~~L~~~p~v~~V~ 115 (223)
..+..++.++.+++.+..+ .++..++++.+++.|++.|++ +|+
T Consensus 241 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~-~v~ 286 (361)
T cd06452 241 LRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGI-KQL 286 (361)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEE
Confidence 3233466677777765433 455567788999999999876 443
No 67
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=98.89 E-value=1.3e-07 Score=85.77 Aligned_cols=180 Identities=20% Similarity=0.233 Sum_probs=102.9
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc-CCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-g~~~sp 74 (223)
+||++|+++++|+++..++ ...++. ++|+++.|++|+++|+ .+|+++++++++.+++....... ..+..+
T Consensus 184 l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~ 259 (402)
T cd00378 184 IADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTLRGP---RGGLILTRKGELAKKINSAVFPGLQGGPHL 259 (402)
T ss_pred HHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCCCCC---CceEEEeccHHHHHHHHHHhCccccCCchH
Confidence 4789999999999964432 234566 8999999999999875 36767777656766665433211 111111
Q ss_pred HhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----C
Q 027424 75 FDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S 145 (223)
Q Consensus 75 ~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~----~ 145 (223)
.....+..++. .+..++++..+++..+.+.|+++ ++.-+..| ..+..+.+.+. +
T Consensus 260 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----------------~~~~~v~v~~~~~~~~ 322 (402)
T cd00378 260 HVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGG----------------TDNHLVLVDLRPKGIT 322 (402)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecC----------------CCCeEEEEeCCccCCC
Confidence 11111122222 33556788899999999999987 34222122 12555666663 2
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--------CCHHHHHHHHHHH
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDLISDLDKA 217 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--------Ed~~dL~~dl~~A 217 (223)
.+...+.+..-++.-.. + ..|...- . ...+..+|++... ||.+.+++-|.+.
T Consensus 323 ~~~~~~~l~~~gI~v~~---~------~~p~~~~-~----------~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~ 382 (402)
T cd00378 323 GKAAEDALEEAGITVNK---N------TLPWDPS-S----------PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARA 382 (402)
T ss_pred HHHHHHHHHHcCcEEcC---C------cCCCCCC-C----------CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHH
Confidence 23344444444433111 0 0121100 0 0123568997744 6788888888887
Q ss_pred HhcC
Q 027424 218 LRTG 221 (223)
Q Consensus 218 l~~~ 221 (223)
+...
T Consensus 383 ~~~~ 386 (402)
T cd00378 383 LKDA 386 (402)
T ss_pred Hhcc
Confidence 7643
No 68
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.89 E-value=4.9e-08 Score=91.34 Aligned_cols=178 Identities=17% Similarity=0.179 Sum_probs=114.4
Q ss_pred CccccCCEEEEecCCCCCCCc--------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-HhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~~~g~~ 71 (223)
+||++|++++||.+++.++.- +|+. ++|+++.|++|++.|+ .||++.+++ ++.+.+.... ..+|..
T Consensus 243 ia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~-~~D~vtgT~hKaL~GP---~GG~I~~~~-~l~~~L~~a~P~i~gg~ 317 (493)
T PRK13580 243 IADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVP-HADIVTTTTHKTLRGP---RGGLVLAKK-EYADAVDKGCPLVLGGP 317 (493)
T ss_pred HHHHcCCEEEEECchhhceeccccchhhcCCCC-CCcEEEeCChhhccCC---CeEEEEecH-HHHHHHhhCCCcccCCC
Confidence 588999999999998776531 5654 8999999999999876 488887764 5555553222 345666
Q ss_pred CChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 72 LAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
+.|.-+.....-.+.. ..+.++..+|+..+++.|++... .|.-.+ .-..++.+.+++..
T Consensus 318 l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~--~vv~gg---------------TdshIV~V~lg~~~ 380 (493)
T PRK13580 318 LPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGA--RLVTGG---------------TDNHLVLIDVTSFG 380 (493)
T ss_pred ccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCC--CccCCC---------------CCCCEEEEEeCCHH
Confidence 7775554444322222 34779999999999999988652 221111 13478888886432
Q ss_pred ----HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec--------CCCHHHHHHHHH
Q 027424 148 ----LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLD 215 (223)
Q Consensus 148 ----~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lEd~~dL~~dl~ 215 (223)
.+.+.+...+++..+.. .|+...- ...+.-|||++- .||.+.+.+-|.
T Consensus 381 ~~g~~a~~~L~e~GI~vn~i~---------~Ptvp~g-----------~~~~srLRIg~~A~ttrg~teedi~~iad~l~ 440 (493)
T PRK13580 381 LTGRQAESALLDAGIVTNRNS---------IPSDPNG-----------AWYTSGIRLGTPALTTLGMGSDEMDEVAELIV 440 (493)
T ss_pred HHHHHHHHHHHHCCeEEcccc---------CCCCCCC-----------CCCCceEEeccchhhhcCCCHHHHHHHHHHHH
Confidence 34555666677643322 3332100 012344777744 478999999999
Q ss_pred HHHhc
Q 027424 216 KALRT 220 (223)
Q Consensus 216 ~Al~~ 220 (223)
++++.
T Consensus 441 ~~l~~ 445 (493)
T PRK13580 441 KVLSN 445 (493)
T ss_pred HHHHh
Confidence 88864
No 69
>PRK05957 aspartate aminotransferase; Provisional
Probab=98.87 E-value=6.1e-08 Score=88.00 Aligned_cols=109 Identities=12% Similarity=0.044 Sum_probs=71.0
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|++||+|++++--.+ ..+..+ .--|++.|+||.++.+|..+|+++ + ++++.+++.......+..
T Consensus 188 ~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~-~-~~~~~~~~~~~~~~~~~~ 265 (389)
T PRK05957 188 ICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMV-I-PIHLLEAIKKIQDTILIC 265 (389)
T ss_pred HHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEe-c-CHHHHHHHHHHHhhcccC
Confidence 47899999999999752111 111111 123889999999988888877655 4 456777777666555444
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+....+.+...++. +....++..++...+.+.|++.+.+
T Consensus 266 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 309 (389)
T PRK05957 266 PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDR 309 (389)
T ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 554445555555543 3444466677888888999887654
No 70
>PRK05764 aspartate aminotransferase; Provisional
Probab=98.86 E-value=2e-07 Score=84.30 Aligned_cols=109 Identities=16% Similarity=0.110 Sum_probs=72.5
Q ss_pred CccccCCEEEEecCCCCCCCcC----c---c---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----P---L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----p---l---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++++|++++...+.. + + ..+-+|++.|+||.++.+|..+| +++. ++++.+++.......+.
T Consensus 192 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG-~i~~-~~~~~~~~~~~~~~~~~ 269 (393)
T PRK05764 192 VAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLG-YAAG-PKELIKAMSKLQSHSTS 269 (393)
T ss_pred HHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeE-EEec-CHHHHHHHHHHHhhccc
Confidence 3789999999999986432110 1 1 12467999999999987776664 4544 45677777666554554
Q ss_pred CCChHhHHHHHhcHH---H-HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 71 GLAPFDCWICLRGVK---T-MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~---t-l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+++...+.+.+.++ . +....++..++...+.+.|+++|.+
T Consensus 270 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 314 (393)
T PRK05764 270 NPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGL 314 (393)
T ss_pred CCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 567766666666664 2 2233455567778888999988654
No 71
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=98.86 E-value=9.7e-08 Score=86.72 Aligned_cols=181 Identities=19% Similarity=0.156 Sum_probs=101.3
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------------- 65 (223)
+||++|++++||++.+-+ +..+.-++++|+++.|++|.++..| .|++..++ ++.+++..+.
T Consensus 185 l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 260 (401)
T PRK10874 185 LAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTG---IGVLYGKS-ELLEAMSPWQGGGKMLTEVSFDGF 260 (401)
T ss_pred HHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCc---cEEEEEch-HHHhcCCCeecCCcceEeeccCcc
Confidence 478999999999998633 2233345689999999999775444 36776665 4444332110
Q ss_pred -------HhcCCCCChHhHHHHHhcHHHHH----HH-HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 66 -------NAEGSGLAPFDCWICLRGVKTMA----LR-VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 66 -------~~~g~~~sp~da~ll~~~l~tl~----~R-~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
+....+.+......+..+++.+. .+ .++..+.+..+.+.|+++|.+. +..| |
T Consensus 261 ~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~-~~~~-----~---------- 324 (401)
T PRK10874 261 TPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFR-SFRC-----Q---------- 324 (401)
T ss_pred CCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCC-----C----------
Confidence 00001222223344555665542 12 2444556777888888888764 3322 1
Q ss_pred CCCeeEEEEeCC--HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCH
Q 027424 134 GAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDV 207 (223)
Q Consensus 134 g~ggl~sf~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~ 207 (223)
.+++++|.+.+ .+...++++.-++. ++-|.. +. ....+..|. .+.||+|+|. ||+
T Consensus 325 -~~~i~~~~~~~~~~~~~~~~L~~~gI~---v~~g~~------~~--------~~~~~~~g~-~~~iRiS~~~~nt~edi 385 (401)
T PRK10874 325 -DSSLLAFDFAGVHHSDLVTLLAEYGIA---LRAGQH------CA--------QPLLAALGV-TGTLRASFAPYNTQSDV 385 (401)
T ss_pred -CCcEEEEEECCcCHHHHHHHHHHCCcE---Eecccc------ch--------HHHHHHhCC-CCEEEEEecccCCHHHH
Confidence 24688888743 23343444443332 222211 00 011123453 4789999994 567
Q ss_pred HHHHHHHHHHHhc
Q 027424 208 NDLISDLDKALRT 220 (223)
Q Consensus 208 ~dL~~dl~~Al~~ 220 (223)
+.+++.|++.++.
T Consensus 386 d~ll~al~~~~~~ 398 (401)
T PRK10874 386 DALVNAVDRALEL 398 (401)
T ss_pred HHHHHHHHHHHHH
Confidence 7788777777664
No 72
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=98.86 E-value=7.3e-08 Score=86.34 Aligned_cols=138 Identities=18% Similarity=0.179 Sum_probs=79.5
Q ss_pred CccccCCEEEEecCCCCCCCc-CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN------------- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~------------- 66 (223)
+|+++|+++++|++++.+... ..-++|+|+++-|.+|++++.+ .|+++.++ ++.+++.....
T Consensus 164 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g---~g~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 239 (373)
T cd06453 164 IAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTG---IGVLYGKE-ELLEEMPPYGGGGEMIEEVSFEET 239 (373)
T ss_pred HHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCC---cEEEEEch-HHhhcCCCeecCCCcccccccccc
Confidence 478999999999998766442 2235799999999999999743 46676654 44444332110
Q ss_pred -------hcCCCCChH-hHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 67 -------AEGSGLAPF-DCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 67 -------~~g~~~sp~-da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
.+.....+. ...-+..+++.+ ..+.++..+.+..+.+.|+++|.++-+ .| + .
T Consensus 240 ~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-----~---------~ 304 (373)
T cd06453 240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVY-GD-----A---------E 304 (373)
T ss_pred ccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CC-----c---------c
Confidence 000011221 122223334432 334466677788888889888876433 22 1 1
Q ss_pred CCCeeEEEEeCC--HHHHHHHHhhcC
Q 027424 134 GAGSVLSFLTGS--LALSKHVVETTK 157 (223)
Q Consensus 134 g~ggl~sf~~~~--~~~~~~f~~~l~ 157 (223)
..+++++|.+.+ .++..+++..-+
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~l~~~g 330 (373)
T cd06453 305 DRAGVVSFNLEGIHPHDVATILDQYG 330 (373)
T ss_pred ccCCeEEEEECCcCHHHHHHHHHHCC
Confidence 136788998743 233444444433
No 73
>PRK07324 transaminase; Validated
Probab=98.83 E-value=1.1e-07 Score=85.87 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=73.0
Q ss_pred CccccCCEEEEecCCCCCCCc----CcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+++..-... ..... .-.|++.|+||+++.+|..+|+++ + ++++.+++...+.....+.++.
T Consensus 181 ~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~-~-~~~li~~~~~~~~~~~~~~~~~ 258 (373)
T PRK07324 181 IARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIA-A-NEEVIDILRKYRDYTMICAGVF 258 (373)
T ss_pred HHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEe-c-CHHHHHHHHHHhCcEEecCChH
Confidence 378899999999997432111 11111 123889999999987888886654 4 5677777776665444445555
Q ss_pred hHHHHHhcHH---HHHHHH-HHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 76 DCWICLRGVK---TMALRV-EKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 76 da~ll~~~l~---tl~~R~-~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
..+.....++ .+..++ +...++...+.++|+.+|.+ .+..|
T Consensus 259 ~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~-~~~~p 303 (373)
T PRK07324 259 DDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRV-SYVKP 303 (373)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eEECC
Confidence 5555545554 334444 44466778899999988765 44555
No 74
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=98.82 E-value=5.3e-08 Score=85.80 Aligned_cols=171 Identities=15% Similarity=0.126 Sum_probs=102.8
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--CC
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--GL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~~ 72 (223)
+|+++|++++||+++.. +.....+..++|+++.|+||++++.+ |+ ++..++++.++++......|. ..
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV---GA-VVVGNRDFIARARRRRKQAGGGMRQ 229 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc---ce-EEECCHHHHHHHHHHHHHhCCChhh
Confidence 36789999999997521 11122334589999999999998653 44 444556677777655444332 23
Q ss_pred ChHhHHHHHhcHHH--HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHH
Q 027424 73 APFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALS 149 (223)
Q Consensus 73 sp~da~ll~~~l~t--l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~ 149 (223)
++..++.....|+. +..+.++..+++..+.+.|++++. . .+| ..++++.+... +....
T Consensus 230 ~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~-~~~----------------~~~~~~~v~~~~~~~~~ 290 (338)
T cd06502 230 SGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG--L-ESE----------------VQTNIVLLDPVEANAVF 290 (338)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC--C-ccc----------------ccCCeEEEecCCccHHH
Confidence 45555666666655 556678888899999999998764 2 223 14677777663 43444
Q ss_pred HHHHhhcCc-ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 150 KHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 150 ~~f~~~l~l-~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
.++.+.+.- ... | ++..++ ..+.||+++++...++-++.+..+|+
T Consensus 291 ~~l~~~l~~~~~~----g----i~~~~~-----------------~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 291 VELSKEAIERRGE----G----VLFYAW-----------------GEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred HHHHHHHHHhhhC----C----EEEEec-----------------CCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 444443210 000 1 000110 12679999998855555566665654
No 75
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=98.81 E-value=1.5e-07 Score=85.90 Aligned_cols=104 Identities=24% Similarity=0.285 Sum_probs=69.4
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh-
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP- 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp- 74 (223)
+||++|+++++|++++.+.. ..++. ++|+++.|++|+++|+ .||+++++++++.++++.... .+...+|
T Consensus 188 la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g~---~gg~i~~~~~~~~~~l~~~~~-~~~~~~~~ 262 (416)
T PRK00011 188 IADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRGP---RGGLILTNDEELAKKINSAVF-PGIQGGPL 262 (416)
T ss_pred HHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCCC---CceEEEeCCHHHHHHHHHHhC-ccccCCcc
Confidence 47899999999999754432 34566 8999999999999765 377787766677776654432 1211112
Q ss_pred --HhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 75 --FDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 75 --~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.-+.+....++ .+..+.++..+|+..+.+.|++.+
T Consensus 263 ~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 303 (416)
T PRK00011 263 MHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG 303 (416)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 11221122222 246678999999999999998753
No 76
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=98.81 E-value=2e-07 Score=84.19 Aligned_cols=104 Identities=15% Similarity=0.155 Sum_probs=64.6
Q ss_pred CccccCCEEEEecCCCCCCCc-C--------cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-R--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~--------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|+++++|++++.++.. + .+..++|+++.|++|.++|. -+|++++ ++++.+.+..... ..+
T Consensus 195 la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~---r~G~~~~-~~~~~~~l~~~~~~~~~~ 270 (393)
T TIGR01822 195 LADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGA---SGGFTTA-RKEVVELLRQRSRPYLFS 270 (393)
T ss_pred HHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCC---CcEEEEe-CHHHHHHHHHhCccceec
Confidence 478999999999998544321 1 11236899999999999874 3577765 4566665544211 223
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~ 108 (223)
.+..|.....+..+++.+ ..+.++..++...+.+.|++.
T Consensus 271 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 271 NSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 334454333344555544 233466677777788888764
No 77
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=98.81 E-value=3.1e-07 Score=82.28 Aligned_cols=132 Identities=17% Similarity=0.169 Sum_probs=81.3
Q ss_pred CccccCCEEEEecCCCCCCCc-C--------cccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-H-hc
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-R--------PLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N-AE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~--------pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~-~~ 68 (223)
+|+++|+++|+|++++.+... . .+... -+|++.|++|.+++. ||+++. ++++.+.+.... . ..
T Consensus 193 ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~----Gg~~~~-~~~~~~~~~~~~~~~~~ 267 (385)
T PRK05958 193 LARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS----GAAVLG-SETLIDYLINRARPFIF 267 (385)
T ss_pred HHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccC----CcEEEc-CHHHHHHHHHhCcccee
Confidence 478999999999998644221 0 12222 348899999999753 466654 455655543321 1 12
Q ss_pred CCCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 69 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
+...+|..+..+..+++.+ ..+.++..++...+.+.|+..+ + +| +| ..|++++|.+.+
T Consensus 268 ~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~-~~-~~----------------~~~~~~~~~~~~ 328 (385)
T PRK05958 268 TTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-F-QL-MD----------------SQSAIQPLIVGD 328 (385)
T ss_pred cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-C-Cc-CC----------------CCCCEEEEEeCC
Confidence 3335666555566666654 3455777788888889998763 2 12 11 257788888854
Q ss_pred HHHHHHHHhhc
Q 027424 146 LALSKHVVETT 156 (223)
Q Consensus 146 ~~~~~~f~~~l 156 (223)
.....+|.+.+
T Consensus 329 ~~~~~~~~~~l 339 (385)
T PRK05958 329 NERALALAAAL 339 (385)
T ss_pred HHHHHHHHHHH
Confidence 44455566555
No 78
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=3.7e-07 Score=83.91 Aligned_cols=184 Identities=23% Similarity=0.249 Sum_probs=110.6
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH-----------------
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----------------- 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~----------------- 62 (223)
+||++|++++||.+.+.|. ..+.-++|+|+++-|.||++.|+ +-.|++.++++ +.+++.
T Consensus 187 la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP--~GiGvLy~r~~-~l~~l~P~~~gg~~~~~~~~~~~ 263 (405)
T COG0520 187 LAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGP--TGIGVLYVRKE-LLEELEPFLGGGGMIEYVSRDEG 263 (405)
T ss_pred HHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCC--CceEEEEEchH-HHhhcCCcccCCCceeeeccccc
Confidence 4899999999999977664 35555689999999999999988 33677877764 333221
Q ss_pred ----HH-HHhcCCCCChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 63 ----FL-QNAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 63 ----~~-~~~~g~~~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
.. .+....+......+.+-.+++.+. ...++..+.+..+.+.|+..|.| +++-|..
T Consensus 264 ~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v-~i~g~~~------------- 329 (405)
T COG0520 264 VTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGV-EIYGPPD------------- 329 (405)
T ss_pred ccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCCc-------------
Confidence 00 111122222233444445555542 22355566677788889999997 5665532
Q ss_pred CCCCeeEEEEeCC--HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 027424 133 KGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 210 (223)
Q Consensus 133 ~g~ggl~sf~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL 210 (223)
...++++||.+.+ ..+..++++.-+++ +.-|. +++. +. -+..|++ +.+|+|.++=+.++=
T Consensus 330 ~~r~~~vsF~v~~~~~~dv~~~L~~~gI~---vr~g~------~ca~------p~--~~~~~~~-~~iR~S~~~YNt~ed 391 (405)
T COG0520 330 ADRGGIVSFNVKGIHPHDVATLLDEKGIA---VRAGH------HCAQ------PL--HRLLGVD-ATIRASLHLYNTEED 391 (405)
T ss_pred ccCceEEEEEeCCCCHHHHHHHHHhCCeE---EEecc------cccc------HH--HHhcCCC-CceEEEEeecCCHHH
Confidence 1268999999843 56777778777743 22221 1111 11 1334443 449999997544444
Q ss_pred HHHHHHHHh
Q 027424 211 ISDLDKALR 219 (223)
Q Consensus 211 ~~dl~~Al~ 219 (223)
++.|-+||+
T Consensus 392 id~l~~aL~ 400 (405)
T COG0520 392 VDRLLEALK 400 (405)
T ss_pred HHHHHHHHH
Confidence 444444444
No 79
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=98.81 E-value=7.4e-09 Score=90.70 Aligned_cols=101 Identities=23% Similarity=0.250 Sum_probs=67.1
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhH-HHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~-~~~l~~~~~~~g~~~s 73 (223)
+||++|++++||++++.++. ....+.|+|++++|+||+++| ..++|+++.+++.. ..++.......+ +.+
T Consensus 178 ~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g--~~~~~~l~~~~~~~~~~~~~~~~~~~~-tts 254 (294)
T cd00615 178 EAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPA--LTQGSMIHVKGDLVNPDRVNEALNLHQ-STS 254 (294)
T ss_pred HHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccch--HhHHHHHHhCCCcCCHHHHHHHHHHHC-CCC
Confidence 47899999999999986432 234557999999999999985 45788887765422 234444444444 457
Q ss_pred hHhHHHHHhcHHHHHH--------HHHHHHhHHHHHHHHHh
Q 027424 74 PFDCWICLRGVKTMAL--------RVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--------R~~~~~~na~~la~~L~ 106 (223)
| +|+++.+++.... ++++..+++..+.++|+
T Consensus 255 p--s~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 255 P--SYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred c--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 7 7888888776432 23445555555555543
No 80
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=98.80 E-value=2.6e-07 Score=83.19 Aligned_cols=104 Identities=18% Similarity=0.160 Sum_probs=65.1
Q ss_pred CccccCCEEEEecCCCCCCCcC---------cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|++||+|++++.++... .+..+.|+++.|++|.++|. .+|+++++ +++.+.+..... ..+
T Consensus 199 la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~---r~G~v~~~-~~~~~~l~~~~~~~~~~ 274 (397)
T PRK06939 199 LADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA---SGGYTAGR-KEVIDWLRQRSRPYLFS 274 (397)
T ss_pred HHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc---CceEEEeC-HHHHHHHHHhCcccccc
Confidence 4789999999999985443211 12225789999999999764 35777654 556666543221 223
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~ 108 (223)
.+..|..++.+..+++.+ ..+.++..++...+.+.|+..
T Consensus 275 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 275 NSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 334454444445555554 233466667778888888765
No 81
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=98.80 E-value=2.9e-07 Score=81.34 Aligned_cols=103 Identities=23% Similarity=0.233 Sum_probs=69.7
Q ss_pred CccccCCEEEEecCCCCCCC---------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL---------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~---------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|+++++|++++.+.. ....+.++|+++.|+||.+++. ||+++.+ +++.+.+..... ..+
T Consensus 157 ~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----gG~i~~~-~~~~~~~~~~~~~~~~~ 231 (349)
T cd06454 157 LAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV----GGYIAGS-KELIDYLRSYARGFIFS 231 (349)
T ss_pred HHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhccc----CCEEECC-HHHHHHHHHhchhhhcc
Confidence 47899999999999863321 1123468999999999999852 4766554 455555544322 123
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~ 108 (223)
...++.....+..+++.+ ..+.++..+++..+.+.|++.
T Consensus 232 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 232 TSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 356666666666777765 445677788888888888775
No 82
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=98.77 E-value=3.4e-07 Score=82.62 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=68.0
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh--------cCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------EGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------~g~~ 71 (223)
+||++|++++||++++.+. ...+..+++|+++.|++|++++.+ . .|+++++ +++.+.+...... .+.+
T Consensus 171 la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g-~-~G~l~~~-~~~i~~l~~~~~~~~~~~~~~~~~~ 247 (370)
T TIGR02539 171 VCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASG-P-CGVLGMS-EEWEDIVLRKSRYSPVKEVELLGCT 247 (370)
T ss_pred HHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCC-C-EEEEEEC-HHHHhhhcccccCCccceeeeeccc
Confidence 4789999999999997653 334556789999999999998532 2 4677665 4565655443221 1111
Q ss_pred CChHhHHHHHhcHHHHHH---HHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~---R~~~~~~na~~la~~L~~~p 109 (223)
..+..+..+..+++.... ++.+..+++..+.+.|++.+
T Consensus 248 ~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g 288 (370)
T TIGR02539 248 SRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIG 288 (370)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111124445556654333 34566777788999998875
No 83
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.75 E-value=4.3e-07 Score=82.64 Aligned_cols=174 Identities=18% Similarity=0.221 Sum_probs=104.3
Q ss_pred CccccCCEEEEecCCCCCCC----c---C--cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----S---R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~---~--pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|++++||++++.++. . . .+....||++.|++|.+++. ||++++ ++++.+.+..... .+.
T Consensus 202 l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~----GG~i~~-~~~~~~~l~~~~~~~~~t 276 (402)
T TIGR01821 202 LADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV----GGYIAA-SRKLIDAIRSYAPGFIFT 276 (402)
T ss_pred HHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccC----Cceeec-CHHHHHHHHHhCcCceec
Confidence 47899999999999763321 0 0 12224689999999999854 576654 4556665543222 123
Q ss_pred CCCChHhHHHHHhcHHHHH---HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~---~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
...+|..+..+..+|+.+. .+.++..++...+.+.|++.. + .+ +| ..|+++.|.+++.
T Consensus 277 ~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-~~----------------~~~~i~~i~~~~~ 337 (402)
T TIGR01821 277 TSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG-I-PV-IP----------------NPSHIVPVIIGDA 337 (402)
T ss_pred CcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC-C-Cc-CC----------------CCCCEEEEEeCCH
Confidence 3467766666667777643 334556688888889888752 2 11 11 1366778877654
Q ss_pred HHHHHHHhhc----CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHH
Q 027424 147 ALSKHVVETT----KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKAL 218 (223)
Q Consensus 147 ~~~~~f~~~l----~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv----GlEd~~dL~~dl~~Al 218 (223)
+.+.+|.+.| +++-.. +..|.. + -....||+|+ --||.+.+++.|++++
T Consensus 338 ~~a~~~~~~L~~~~Gi~v~~---------~~~p~~------~--------~g~~~lRis~~~~~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 338 ALCKKVSDLLLNKHGIYVQP---------INYPTV------P--------RGTERLRITPTPAHTDKMIDDLVEALLLVW 394 (402)
T ss_pred HHHHHHHHHHHhcCCEEEEe---------ECCCCC------C--------CCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 4455555543 232111 111110 0 0135799996 3467888888888887
Q ss_pred hcC
Q 027424 219 RTG 221 (223)
Q Consensus 219 ~~~ 221 (223)
+..
T Consensus 395 ~~~ 397 (402)
T TIGR01821 395 DRL 397 (402)
T ss_pred HHc
Confidence 654
No 84
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=98.73 E-value=3.7e-07 Score=82.84 Aligned_cols=182 Identities=20% Similarity=0.141 Sum_probs=100.8
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------------- 65 (223)
+||++|++++||++.+.+.. .+.-++++|+++-|.+|+++..+ .|++..++ ++.+++....
T Consensus 182 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T TIGR03392 182 LAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTG---IGVLYGKT-ELLEAMPPWQGGGKMLSHVSFDGF 257 (398)
T ss_pred HHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCc---eEEEEEcH-HHHhhCCCeecCCceEeecccccc
Confidence 47899999999999864432 23334689999999999776444 46676654 4444332110
Q ss_pred -------HhcCCCCChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 66 -------NAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 66 -------~~~g~~~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
+....+.+.....-+..+++.+. ...++..+.+..+.+.|++.|.+. +..+ |
T Consensus 258 ~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~-~~~~-----~---------- 321 (398)
T TIGR03392 258 IPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFR-SFRC-----P---------- 321 (398)
T ss_pred ccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeE-EeCC-----C----------
Confidence 00011222223334445555432 223455566777888888888764 3211 1
Q ss_pred CCCeeEEEEeCC--HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCH
Q 027424 134 GAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDV 207 (223)
Q Consensus 134 g~ggl~sf~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~ 207 (223)
.+++++|.+.+ .+...+.++.-++ .++-|..-+ ....+.+|. ++.||+|++. ||+
T Consensus 322 -~~~i~~~~~~~~~~~~l~~~L~~~gI---~v~~g~~~~--------------~~~~~~~g~-~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 322 -GSSLLAFDFAGVHHSDLAALLAESGI---ALRAGQHCA--------------QPLMAALGV-SGTLRASFAPYNTQQDV 382 (398)
T ss_pred -CCcEEEEEeCCcCHHHHHHHHHhCCE---EEecCccch--------------HHHHHHhCC-CCEEEEEeeccCCHHHH
Confidence 24689888743 2333333333332 223222100 011122342 4789999976 677
Q ss_pred HHHHHHHHHHHhcC
Q 027424 208 NDLISDLDKALRTG 221 (223)
Q Consensus 208 ~dL~~dl~~Al~~~ 221 (223)
+.+++-|+++++..
T Consensus 383 ~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 383 DALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888777653
No 85
>PLN02483 serine palmitoyltransferase
Probab=98.73 E-value=5.6e-07 Score=84.59 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=69.7
Q ss_pred CccccCCEEEEecCCCCCCC---------cCcc-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hc
Q 027424 1 MAHAHGALLLVDNSIMSPVL---------SRPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~---------~~pl-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~ 68 (223)
+|+++|+++++|++++-+.. .-.+ ..+.||++.|+||.+++. ||++++ ++++.+.++.... ..
T Consensus 265 la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~----GG~i~~-~~~li~~l~~~~~~~~~ 339 (489)
T PLN02483 265 VCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC----GGYIAG-SKELIQYLKRTCPAHLY 339 (489)
T ss_pred HHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC----ceEEEc-CHHHHHHHHHhCccccc
Confidence 47899999999999853321 0111 136799999999999864 587764 5567666654321 23
Q ss_pred CCCCChHhHHHHHhcHHHH---------HHHHHHHHhHHHHHHHHHhcC
Q 027424 69 GSGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl---------~~R~~~~~~na~~la~~L~~~ 108 (223)
+..++|..+..+..+|+.+ ..|.++..+|...+.+.|++.
T Consensus 340 ~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~ 388 (489)
T PLN02483 340 ATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM 388 (489)
T ss_pred cCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC
Confidence 4456665555566667543 245678888999999999886
No 86
>PRK06108 aspartate aminotransferase; Provisional
Probab=98.72 E-value=2.9e-07 Score=82.69 Aligned_cols=109 Identities=18% Similarity=0.147 Sum_probs=65.3
Q ss_pred CccccCCEEEEecCCCCCCCc------CcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++++..... ..+.+ .-.+++.|++|.++..+..+|. +++ ++++.+.+.........
T Consensus 186 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~-~~~-~~~~~~~~~~~~~~~~~ 263 (382)
T PRK06108 186 HCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW-LVA-PPALGQVLEKLIEYNTS 263 (382)
T ss_pred HHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceee-eeC-CHHHHHHHHHHHHhccc
Confidence 368899999999996432211 11111 2348899999999766666665 444 45566666554443333
Q ss_pred CCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 71 GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
..++.....+...|+. +....++..++...+.+.|+..|.+
T Consensus 264 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 308 (382)
T PRK06108 264 CVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGV 308 (382)
T ss_pred CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4455443344444432 3333455666777788888887654
No 87
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=98.72 E-value=8.5e-07 Score=78.49 Aligned_cols=132 Identities=19% Similarity=0.174 Sum_probs=80.4
Q ss_pred CccccCCEEEEecCCCCCCC-cC--c------c-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hc
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SR--P------L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~--p------l-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~ 68 (223)
+|+++|+++|+|++++.... .. + + ..+.||++.|++|++++. ||+++. ++++.+.+..... ..
T Consensus 171 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~----gG~~~~-~~~~~~~~~~~~~~~~~ 245 (360)
T TIGR00858 171 LAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY----GAYVAG-SQALIDYLINRARTLIF 245 (360)
T ss_pred HHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhcc----CcEEEc-CHHHHHHHHHhCcccee
Confidence 47899999999999853321 11 1 1 237899999999999864 477765 4456555543222 12
Q ss_pred CCCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 69 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
+...+|.....+..+++.+ ..+.++..++...+.+.|++.+ + ++. | ..|.++.+.++.
T Consensus 246 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~-~~~-~----------------~~~~~~~~~~~~ 306 (360)
T TIGR00858 246 STALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-F-TLM-P----------------SCTPIVPVIIGD 306 (360)
T ss_pred cCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-C-ccC-C----------------CCCCEEEEEeCC
Confidence 3334565444444555533 3455778888889999998764 2 221 2 146688888754
Q ss_pred HHHHHHHHhhc
Q 027424 146 LALSKHVVETT 156 (223)
Q Consensus 146 ~~~~~~f~~~l 156 (223)
.....+|.+.+
T Consensus 307 ~~~~~~~~~~l 317 (360)
T TIGR00858 307 NASALALAEEL 317 (360)
T ss_pred HHHHHHHHHHH
Confidence 33345555554
No 88
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=98.71 E-value=3.6e-07 Score=83.81 Aligned_cols=188 Identities=20% Similarity=0.217 Sum_probs=98.0
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH---------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--------------- 64 (223)
+||++|++++||.+++.+.. .+.-++|+|+++.|++|+++.++ .|++.++++ +.+++...
T Consensus 198 l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~ 273 (424)
T PLN02855 198 WAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTG---IGFLWGKSD-LLESMPPFLGGGEMISDVFLDHS 273 (424)
T ss_pred HHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCc---cEEEEEchh-hhhcCCCEecCCCceeeeecCcc
Confidence 47899999999999865532 33345789999999999665443 466766653 33332211
Q ss_pred ------HHhcCCCCChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 65 ------QNAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 65 ------~~~~g~~~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
.+....+.+....+.+..+++.+. ...++..+-+..+.+.|++.|.+ +++-|. ++.+.
T Consensus 274 ~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~-~i~~~~-~~~~~--------- 342 (424)
T PLN02855 274 TYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGV-RIYGPK-PSEGV--------- 342 (424)
T ss_pred ccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE-EEeCCC-ccccc---------
Confidence 000011112222233344444331 11234445556667777777876 455441 11111
Q ss_pred CCCeeEEEEeCCHHHHHHHHhhcCc-ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHH
Q 027424 134 GAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVN 208 (223)
Q Consensus 134 g~ggl~sf~~~~~~~~~~f~~~l~l-~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~ 208 (223)
..+++++|.+.+. ....+.+.|.- +.+.++-|..-+ + ......|+ ++.||+|+++ ||++
T Consensus 343 ~r~~~v~~~~~~~-~~~~v~~~L~~~~gI~v~~g~~c~----~----------~~~~~~g~-~~~iRiS~~~ynt~~di~ 406 (424)
T PLN02855 343 GRAALCAFNVEGI-HPTDLSTFLDQQHGVAIRSGHHCA----Q----------PLHRYLGV-NASARASLYFYNTKEEVD 406 (424)
T ss_pred CcccEEEEEECCc-CHHHHHHHhcccCCEEEechhhhh----H----------HHHHHhCC-CCeEEEEeccCCCHHHHH
Confidence 1368999988431 12233333321 122223222110 0 01123454 4689999985 5667
Q ss_pred HHHHHHHHHHh
Q 027424 209 DLISDLDKALR 219 (223)
Q Consensus 209 dL~~dl~~Al~ 219 (223)
.|++.|++.++
T Consensus 407 ~l~~~l~~~~~ 417 (424)
T PLN02855 407 AFIHALKDTIA 417 (424)
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 89
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=98.71 E-value=5.3e-07 Score=81.54 Aligned_cols=108 Identities=21% Similarity=0.279 Sum_probs=80.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCC----cEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh-------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGA----DIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GA----Divv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~------- 67 (223)
+|+++|++||+|++++.+..++.-..|. |+++.|++ |+++.. .||+++.+++++.++++..+..
T Consensus 143 l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~ 219 (380)
T TIGR03588 143 LAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTA---EGGAVTTNDEELAERMRLLRSHGITKDPL 219 (380)
T ss_pred HHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCccccc---CceEEEECCHHHHHHHHHHHHCCCCCCcc
Confidence 4789999999999987654333333445 99999986 889743 5888888888887766544320
Q ss_pred ----------------cC--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 68 ----------------EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 68 ----------------~g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.| ..++...+.+.+..|+.+..+.++..+|+..+.+.|++.|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~ 281 (380)
T TIGR03588 220 LFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYF 281 (380)
T ss_pred cccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 11 234556667777778889999999999999999999998865
No 90
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.71 E-value=4.4e-08 Score=95.17 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=72.8
Q ss_pred cccCCEE-EEecCCCCCCCcCc-------ccC--CCcEE---EecccccccCCcccceeEEEecChhHHHHHHHHHHhcC
Q 027424 3 HAHGALL-LVDNSIMSPVLSRP-------LEL--GADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 69 (223)
Q Consensus 3 ~~~g~~l-vVDnT~~s~~~~~p-------l~~--GADiv---v~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g 69 (223)
+..|+++ +||++|++++.++| +.. |||.+ +||+||+++ +.+|+.++++++.--.+++.....+++
T Consensus 320 ~~~g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~vd~~~~n~a~~m~~ 397 (713)
T PRK15399 320 QTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGEYDEETFNEAFMMHT 397 (713)
T ss_pred HHhCCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCCCCHHHHHHHHHHHc
Confidence 3447877 59999998765554 333 68988 999999999 778999999977422356666666666
Q ss_pred CCCChHhHHHHHhcHHHHHHHH---------HHHHhHHHHHHHHHhcCC
Q 027424 70 SGLAPFDCWICLRGVKTMALRV---------EKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~~R~---------~~~~~na~~la~~L~~~p 109 (223)
+.|| +|+++.||+....-| ++..+.+..+.+.+++.+
T Consensus 398 -STSP--sY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~ 443 (713)
T PRK15399 398 -STSP--SYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLR 443 (713)
T ss_pred -CCCc--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 6799 999999999864433 334555555555555443
No 91
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=98.69 E-value=6.4e-07 Score=79.56 Aligned_cols=107 Identities=16% Similarity=0.091 Sum_probs=67.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcc-c----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl-~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+++.......++ . .+.+|++.|+||+++.++..+|+ ++.+ +++.+++...... ...++.
T Consensus 153 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~-i~~~-~~~~~~l~~~~~~--~~~s~~ 228 (330)
T TIGR01140 153 RLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGF-VVAH-PALLARLREALGP--WTVNGP 228 (330)
T ss_pred HhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhh-eeCC-HHHHHHHHhcCCC--CCchHH
Confidence 368899999999998644322221 1 24569999999999877766655 5444 4566666544322 234454
Q ss_pred hHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 76 DCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 76 da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
....+.+-++. .....++..++...+.+.|++++.+
T Consensus 229 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 267 (330)
T TIGR01140 229 ARAAGRAALADTAWQAATRARLAAERARLAALLARLGGL 267 (330)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44444444443 2333466677778888999988754
No 92
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=98.67 E-value=6.6e-07 Score=81.73 Aligned_cols=177 Identities=17% Similarity=0.191 Sum_probs=102.4
Q ss_pred CccccCCEEEEecCCCCCCC-cC--------cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~--------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|++++||++++.+++ .+ .+....|+++.|++|.+++. ||++++ ++++.+.++.... ..+
T Consensus 203 l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~----GG~~~~-~~~~~~~l~~~~~~~~~s 277 (410)
T PRK13392 203 LADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL----GGYIAA-SADLIDFVRSFAPGFIFT 277 (410)
T ss_pred HHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc----cchhhc-CHHHHHHHHHhCcchhcc
Confidence 47889999999999874432 11 12225789999999999854 577755 4566665554432 123
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
..++|..++.+..+|+.+ ..+.++..++...+.+.|++.. + .+ +| +.++++.+.++..
T Consensus 278 ~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-~~----------------~~~~~~~i~~~~~ 338 (410)
T PRK13392 278 TALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG-I-PV-MP----------------SPSHIVPVMVGDP 338 (410)
T ss_pred CcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-C-CC-CC----------------CCCCEEEEEeCCH
Confidence 345665566566666654 3444667888888888888752 2 11 12 1355565666544
Q ss_pred HHHHHHHhhcC-cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhcC
Q 027424 147 ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 221 (223)
Q Consensus 147 ~~~~~f~~~l~-l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~~ 221 (223)
..+.+|.+.|. --.+.++-+ ..|.. + -..+.+|+|+- -||.+.+++.|+++++..
T Consensus 339 ~~~~~~~~~L~~~~GI~v~~~------~~p~~------~--------~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 339 TLCKAISDRLMSEHGIYIQPI------NYPTV------P--------RGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHHHHHHHhCCEEEeee------CCCCC------C--------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 34445554431 111111111 11110 0 02357999973 456777888887776643
No 93
>PLN02651 cysteine desulfurase
Probab=98.67 E-value=4.3e-07 Score=81.60 Aligned_cols=180 Identities=17% Similarity=0.105 Sum_probs=96.2
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-------HhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------~~~g~~~ 72 (223)
+||++|++++||.+.+.+. .+++-++|+|+++.|.+|+++.++ .|++..+++.+ .++.... .....+.
T Consensus 163 ~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G---~g~l~v~~~~~-~~l~p~~~g~~~~~~~~~GT~ 238 (364)
T PLN02651 163 LCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKG---VGALYVRRRPR-VRLEPLMSGGGQERGRRSGTE 238 (364)
T ss_pred HHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCc---eEEEEEcCCCC-CCCCccccCCCccCCccCCCc
Confidence 4789999999999988763 466667899999999999843332 45566665322 1111100 0111233
Q ss_pred ChHhHHHHHhcHHHHHHHHH----HHHhHHHHHHHHHhc-CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 73 APFDCWICLRGVKTMALRVE----KQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~----~~~~na~~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
+....+-+..+++.+..-++ +..+-+..+.+.|++ .|.+ +++-|.- |. ....++++|.+.+..
T Consensus 239 ~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~-~i~~~~~---~~--------~~~~~i~~~~~~~~~ 306 (364)
T PLN02651 239 NTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGV-RVNGPRD---PE--------KRYPGTLNLSFAYVE 306 (364)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCE-EEECCCC---cc--------cCcCCEEEEEeCCCC
Confidence 33334455566665533233 333344445555554 4666 5555521 10 013679999884311
Q ss_pred HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEecCCCH
Q 027424 148 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDV 207 (223)
Q Consensus 148 ~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvGlEd~ 207 (223)
.+.+...|.- +.++.|..=+ +..... ...-+.+|+. .+.||+|+|.-..
T Consensus 307 -~~~~~~~L~~--i~v~~g~~c~----~~~~~~----~~~~~~~g~~~~~~~~~vR~S~~~~~t 359 (364)
T PLN02651 307 -GESLLMGLKE--VAVSSGSACT----SASLEP----SYVLRALGVPEEMAHGSLRLGVGRFTT 359 (364)
T ss_pred -HHHHHHHhCC--EEEEchhhcC----CCCCCc----CHHHHHcCCChHHhCceEEEEcCCCCC
Confidence 1233333332 5566663211 111000 0122445654 4899999997653
No 94
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=98.66 E-value=1.1e-06 Score=78.61 Aligned_cols=106 Identities=21% Similarity=0.193 Sum_probs=66.8
Q ss_pred CccccCCEEEEecCCCCCCCcCc----ccCCCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP----LELGAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p----l~~GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++......+ ...+.| |++.|+||+++.++..+|. ++ .++.+.++++......+.+.++
T Consensus 164 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~-~~-~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
T TIGR03537 164 MCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGF-VA-GDEKLISFLRKLRANFGVASPD 241 (350)
T ss_pred HHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCcccccee-ee-cCHHHHHHHHHHHHhhccCCCH
Confidence 37889999999999864322211 222333 9999999999877777764 54 4566777777666555544444
Q ss_pred HhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~ 108 (223)
.....+...+. .+..+.++..++...+.+.|+.+
T Consensus 242 ~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 242 FVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV 278 (350)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 33333333332 23344466667777788888876
No 95
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=98.66 E-value=3.9e-07 Score=82.05 Aligned_cols=193 Identities=16% Similarity=0.160 Sum_probs=101.4
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHH-HHH--HHH--HhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELY--FLQ--NAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~-~l~--~~~--~~~g~~~sp 74 (223)
+||++|++++||.+.+.+.. .+.-++|+|+++.|.+|+++..| .|++.++++.... .+. ... ...| +.+.
T Consensus 161 l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~g~l~v~~~~~~~p~~~g~~~~~~~~~g-t~~~ 236 (379)
T TIGR03402 161 IAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKG---VGALYIRKGTRFRPLLRGGHQERGRRAG-TENV 236 (379)
T ss_pred HHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCc---eEEEEECCCCCCCCcccCCccCCCcCCC-CccH
Confidence 47899999999999865532 33345799999999999654333 4556566532110 000 000 0112 2232
Q ss_pred HhHHHHHhcHHHHHHHH----HHHHhHHHHHHHHHhc-CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 75 FDCWICLRGVKTMALRV----EKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 75 ~da~ll~~~l~tl~~R~----~~~~~na~~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
...+-+..+++-+...+ ++..+....+.+.|++ .|.+ ++.-| +. ....++++|.+.+.+ .
T Consensus 237 ~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~-~~~~~-----~~--------~~~~~~~~~~~~~~~-~ 301 (379)
T TIGR03402 237 PGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDA-RLNGD-----PT--------KRLPNTVNISFEYIE-G 301 (379)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCE-EEeCC-----Cc--------cCCCCEEEEEecCCC-H
Confidence 22333444554443333 4444455566666664 6665 23221 11 012467877763221 2
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
..+...|.-..+.++.|..-+- +.. .+....+.+|.+ ++.||+|.|. ||++.+++-|+++++.
T Consensus 302 ~~~~~~l~~~gI~v~~g~~c~~---~~~-----~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 302 EAILLLLDMEGICASSGSACTS---GSL-----EPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred HHHHHhhccCCEEEEchhhcCC---CCC-----CcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3455555443444555532111 100 001223455653 5789999998 7778888888777653
No 96
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.66 E-value=1.1e-06 Score=78.83 Aligned_cols=173 Identities=14% Similarity=0.158 Sum_probs=96.5
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|+++...... .+++ ....+++.|+||+++-.+..+|.++ ..++.+.+.+..... ....++
T Consensus 170 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v-~~~~~~~~~l~~~~~--~~~~~~ 246 (356)
T PRK08056 170 RCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLV-NSDDAAVARMRRQQM--PWSINA 246 (356)
T ss_pred HHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeee-cCCHHHHHHHHHhCC--CCchhH
Confidence 368899999999997432211 1122 2356999999999998898887755 444555555543221 112344
Q ss_pred HhHHHHHhcHH--HHHHH-HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-C-HHHH
Q 027424 75 FDCWICLRGVK--TMALR-VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-S-LALS 149 (223)
Q Consensus 75 ~da~ll~~~l~--tl~~R-~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~-~~~~ 149 (223)
...+.....++ .+..+ .++..++...+.+.|+..+.+ .+ +|. .|..+-+.+. + .+.+
T Consensus 247 ~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-~~~----------------~~~~~~~~~~~~~~~~~ 308 (356)
T PRK08056 247 FAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLL-TV-WPG----------------RANYLFLRCERPDIDLQ 308 (356)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-EE-cCC----------------CCcEEEEEcCCChHHHH
Confidence 43333333332 22333 355567778888999887765 33 331 2344444443 2 2222
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 219 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~ 219 (223)
+.+. .-++. +.-|.. + .|..++.||||+|- |+.+.|++.|++.++
T Consensus 309 ~~l~-~~gI~---v~~~~~------------f---------~~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 309 RALL-TQRIL---IRSCAN------------Y---------PGLDSRYYRVAIRSAAENERLLAALRNVLT 354 (356)
T ss_pred HHHH-HCCeE---EEECCC------------C---------CCCCCCEEEEEEcCHHHHHHHHHHHHHHHc
Confidence 2222 22321 111110 0 01235689999997 677888888887654
No 97
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.64 E-value=1.4e-06 Score=78.20 Aligned_cols=170 Identities=17% Similarity=0.232 Sum_probs=99.2
Q ss_pred ccccCCEEEEecCCCCCCCc----CcccC-CC-c--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 2 AHAHGALLLVDNSIMSPVLS----RPLEL-GA-D--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~----~pl~~-GA-D--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
|+++|+++|+|+++.-.... .++.. .. + |++.|+||.++-.|..+|.++ ..++.+.+.+...... ..++
T Consensus 170 a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv-~~~~~~~~~~~~~~~~--~~~~ 246 (354)
T PRK06358 170 CEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGL-TSNKNLAEKLLQMREP--WSIN 246 (354)
T ss_pred HHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeee-cCCHHHHHHHHHhCCC--Ccch
Confidence 67899999999997422211 11211 11 2 889999999987788887654 4455565555544322 2344
Q ss_pred hHhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC-HHHH
Q 027424 74 PFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALS 149 (223)
Q Consensus 74 p~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-~~~~ 149 (223)
....+.....++ .+....+...++...+.+.|+.+|.+ .|..| .|+.+.+.+.+ .+.+
T Consensus 247 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~~~~-----------------~g~f~~~~~~~~~~~~ 308 (354)
T PRK06358 247 TFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGI-KVYKP-----------------SVNFIFFKLEKPIDLR 308 (354)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCc-EEcCC-----------------cceEEEEEcCchHHHH
Confidence 444445555553 23444566677778888999887763 33333 34555566643 2333
Q ss_pred HHHHhhcCcc-eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 027424 150 KHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 218 (223)
Q Consensus 150 ~~f~~~l~l~-~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al 218 (223)
+++.+ -++. ..+..+| +..++.||||+|- |+.+.|++-|++.+
T Consensus 309 ~~l~~-~gI~v~~~~~f~-------------------------~~~~~~iRls~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 309 KELLK-KGILIRSCSNYR-------------------------GLDENYYRVAVKSREDNKKLLKALEVIL 353 (354)
T ss_pred HHHHH-CCeEEEECCCCC-------------------------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 33332 2321 1111111 1135789999997 77888888887654
No 98
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.64 E-value=1.3e-06 Score=79.74 Aligned_cols=174 Identities=17% Similarity=0.239 Sum_probs=102.4
Q ss_pred CccccCCEEEEecCCCCCCC-c--------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh--cC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-S--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~--------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--~g 69 (223)
+|+++|+.++||++++.+++ . ..+....||++.|++|.+++. ||++++ ++++.+.+...... .+
T Consensus 202 l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~----GG~~~~-~~~~~~~l~~~~~~~~~t 276 (406)
T PRK13393 202 VAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM----GGYITG-SAALCDFIRSFASGFIFT 276 (406)
T ss_pred HHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc----CceeeC-CHHHHHHHHHhCcCceec
Confidence 47899999999999864431 1 012223689999999999853 577754 45565555443221 23
Q ss_pred CCCChHhHHHHHhcHHHHH---HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~---~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
.+.+|..+..+..+|+.+. .+.++..++...+.+.|++.. . +-. ++.|+++.+.+++.
T Consensus 277 ~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-----~~~-------------~~~~~i~~v~~~~~ 337 (406)
T PRK13393 277 TSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG-I-----PHL-------------PNPSHIVPVMVGDP 337 (406)
T ss_pred CccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-C-----CcC-------------CCCCCeEEEEeCCH
Confidence 4567766666667776542 233555677888888887632 1 111 23567888877554
Q ss_pred HHHHHHHhhc----CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHH
Q 027424 147 ALSKHVVETT----KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKAL 218 (223)
Q Consensus 147 ~~~~~f~~~l----~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al 218 (223)
..+.++.+.| +++-.. + ..|.. + . ..+.||||+. -||.+.+++.|++++
T Consensus 338 ~~~~~l~~~L~~~~Gi~v~~---~------~~p~~------p------~--g~~~iRis~~~~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 338 VLCKQISDELLDRYGIYVQP---I------NYPTV------P------R--GTERLRITPSPLHTDADIEHLVQALSEIW 394 (406)
T ss_pred HHHHHHHHHHHHhCCEEEEe---E------CCCCC------C------C--CCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 3444554443 333211 1 11210 0 0 2357999996 456777777777776
Q ss_pred hcC
Q 027424 219 RTG 221 (223)
Q Consensus 219 ~~~ 221 (223)
+..
T Consensus 395 ~~~ 397 (406)
T PRK13393 395 ARL 397 (406)
T ss_pred Hhc
Confidence 644
No 99
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=98.63 E-value=8.2e-07 Score=79.55 Aligned_cols=188 Identities=19% Similarity=0.214 Sum_probs=104.6
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH---------------H
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---------------L 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~---------------~ 64 (223)
+||++|++++||.+++.+.. ...-+.|+|+++.|.+|+++|+.. .|+++ .+++.....+.. .
T Consensus 162 l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g-~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (376)
T TIGR01977 162 LAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQG-TGGLY-IREGIKLKPLKSGGTGSHSALIDQPSEL 239 (376)
T ss_pred HHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCC-ceEEE-EcCCcCcCceecCCCccccccccccccc
Confidence 47899999999999876543 233346999999999999988642 34444 444321111100 0
Q ss_pred -HHhcCCCCChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCee
Q 027424 65 -QNAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 138 (223)
Q Consensus 65 -~~~~g~~~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl 138 (223)
.+....+.+....+-+..+++.+. ...+++.+.++.+.+.|++.+.+ ++.-|.- + ...+++
T Consensus 240 ~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~-~~~~~~~---~---------~~~~~~ 306 (376)
T TIGR01977 240 PDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKV-KIYGPAD---P---------ANRVGV 306 (376)
T ss_pred hhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe-EEeCCCC---c---------cccCCe
Confidence 001111222222333444555442 23467778888888899888876 4543311 1 113678
Q ss_pred EEEEeCC--HHHHHHHHhhc-CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcC-CCCCeEEEEecCCCHHHHHHHH
Q 027424 139 LSFLTGS--LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG-LTEDLVRISVGIEDVNDLISDL 214 (223)
Q Consensus 139 ~sf~~~~--~~~~~~f~~~l-~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g-i~~~liRlsvGlEd~~dL~~dl 214 (223)
++|.+.+ .+...+.+++- ++ .++-|...+... ....| ..++.||+|++....++=++.+
T Consensus 307 v~~~~~~~~~~~~~~~L~~~~gi---~v~~g~~~~~~~--------------~~~~g~~~~~~iRis~~~~~t~~dv~~~ 369 (376)
T TIGR01977 307 VSFTVEGIDSEEVADILDEKFDI---ATRTGLHCAPLA--------------HKTIGTFATGTIRLSLGYFNTEEEIEKL 369 (376)
T ss_pred EEEEECCCCHHHHHHHHhccCCE---EEEcccccchHH--------------HHHhCCCCCCeEEEecCCCCCHHHHHHH
Confidence 9998742 23333333332 33 233333211110 01122 2467899999998777766666
Q ss_pred HHHHhc
Q 027424 215 DKALRT 220 (223)
Q Consensus 215 ~~Al~~ 220 (223)
-++|+.
T Consensus 370 ~~~l~~ 375 (376)
T TIGR01977 370 LEALSE 375 (376)
T ss_pred HHHHhh
Confidence 666653
No 100
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.63 E-value=2.2e-07 Score=86.30 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=74.5
Q ss_pred CccccCCEEEEecCCCCCCCc------CcccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC-CC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~-~~ 72 (223)
+|+++|++++||++++..... +.++.| +|+++.|+||++..+.+ ||+++.+++++.+.+... ..|. ..
T Consensus 230 la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~--y~g~~~~ 305 (444)
T TIGR03531 230 ICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKS--YPGRASA 305 (444)
T ss_pred HHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHh--ccCCCCC
Confidence 589999999999999854321 345565 89999999999985543 788878787777666543 2221 12
Q ss_pred Ch-HhHHH--HHhcHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 AP-FDCWI--CLRGVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp-~da~l--l~~~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
+| .++|. +..+.+.+...+++..+++..+.+.|++.
T Consensus 306 s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 306 SPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 45554 33466778888899999999999998864
No 101
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=98.63 E-value=1.5e-06 Score=78.38 Aligned_cols=190 Identities=17% Similarity=0.146 Sum_probs=99.9
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCCcccceeEEEecChh-HHHHHH---HHH-HhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELY---FLQ-NAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~~~~l~---~~~-~~~g~~~sp 74 (223)
+||++|++++||++.+.+ ...+..++|+|+++.|.||+++.+| + |++.+++.. +...+. ... ...| +.+.
T Consensus 165 la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-g~l~vr~~~~~~p~~~g~~~~~~~~~g-t~~~ 240 (382)
T TIGR03403 165 ICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKG--V-GGLYIRKGVELTPLFHGGEHMGGRRSG-TLNV 240 (382)
T ss_pred HHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCc--e-EEEEECCCCCCCCcccCCCCCCCcccC-CcCh
Confidence 478999999999998765 3356667899999999999876555 3 445455432 111010 000 0122 2333
Q ss_pred HhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC--HHH
Q 027424 75 FDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LAL 148 (223)
Q Consensus 75 ~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~--~~~ 148 (223)
...+-+..+++.+ ....++..+....+.+.|++.|.+ +|..|. + ...+++++|.+.+ .+.
T Consensus 241 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~-~~~~~~--~-----------~~~~~~~~~~~~~~~~~~ 306 (382)
T TIGR03403 241 PYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDV-FVVGDR--E-----------HRVPNTILISIKGVEGEA 306 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCE-EEECCC--C-----------CCcCCEEEEEeCCCCHHH
Confidence 2233344454433 333355556666777778777876 444331 0 0124566777742 333
Q ss_pred HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 149 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 149 ~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
....++.- .+.++-|..-+ +. .+. +..-+...|.+ .+.||+|.+. ||++.+++-|+++++
T Consensus 307 ~~~~L~~~---gI~v~~g~~c~----~~--~~~--~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~ 374 (382)
T TIGR03403 307 MLWDLNKA---GIAASTGSACA----SE--DLE--ANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ 374 (382)
T ss_pred HHHhhccC---CEEEEchhccC----CC--CCC--cCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 32223333 33344442110 00 000 01234455553 4789999996 455666666655544
No 102
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.62 E-value=5.7e-08 Score=94.40 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=72.7
Q ss_pred ccccCCEEEEecCCCCCCCc-------CcccCCC---c--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC
Q 027424 2 AHAHGALLLVDNSIMSPVLS-------RPLELGA---D--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 69 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~-------~pl~~GA---D--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g 69 (223)
+|.++ ++||++|++++.+ .|+..|| | +|+||+||+++ +.+|+.++++++.--.+++.....+++
T Consensus 322 ~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQaS~LHvkg~vd~~~~n~a~~m~~ 397 (714)
T PRK15400 322 LDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHT 397 (714)
T ss_pred hCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc--chhHHhHHHHcCCCCHHHHHHHHHHHc
Confidence 46666 6899999987643 4556788 5 99999999999 678999999876422355666666666
Q ss_pred CCCChHhHHHHHhcHHHHHHHH---------HHHHhHHHHHHHHHhcCC
Q 027424 70 SGLAPFDCWICLRGVKTMALRV---------EKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~~R~---------~~~~~na~~la~~L~~~p 109 (223)
+.|| +|+++.||+....-| ++..+.+..+.+.+.+.+
T Consensus 398 -STSP--sY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~ 443 (714)
T PRK15400 398 -TTSP--HYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (714)
T ss_pred -CCCc--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 6799 999999999865443 334555556666565544
No 103
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=98.62 E-value=2.4e-06 Score=76.87 Aligned_cols=103 Identities=22% Similarity=0.120 Sum_probs=64.8
Q ss_pred CccccCCEEEEecCCCCCCCc---------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|+++|+|++++.+... -++..+.|+++.|++|++++. ||+++. ++++.+.+..... ..+
T Consensus 188 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----gG~~~~-~~~~~~~~~~~~~~~~~~ 262 (385)
T TIGR01825 188 LAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV----GGYAAG-HKELIEYLKNRARPFLFS 262 (385)
T ss_pred HHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC----CCEEec-CHHHHHHHHHhCcccccc
Confidence 478999999999998654221 123457889999999999753 476654 4556666544322 223
Q ss_pred CCCChHhHHHHHhcHHHHH---HHHHHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~---~R~~~~~~na~~la~~L~~~ 108 (223)
....|...+.+..+++.+. ...++..++...+.+.|++.
T Consensus 263 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 263 TAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 3345544455556665542 23455666777777878753
No 104
>PRK07568 aspartate aminotransferase; Provisional
Probab=98.61 E-value=9.8e-07 Score=79.88 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=67.0
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccC-C-Cc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLEL-G-AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~-G-AD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|+++..-.. ...+.+ + .+ |++.|+||.++.+|..+|+++ +.++++.+.+...... ..+
T Consensus 190 ~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~-~~~~~~~~~~~~~~~~-~~~ 267 (397)
T PRK07568 190 IAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI-SKNKELIAAAMKLCQA-RLS 267 (397)
T ss_pred HHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEe-cCCHHHHHHHHHHhhc-cCC
Confidence 36889999999999853211 112222 2 23 899999999998888876654 5555665554433222 123
Q ss_pred CChHhHHHHHhcHH---H-HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 72 LAPFDCWICLRGVK---T-MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 72 ~sp~da~ll~~~l~---t-l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.++.....+...++ . +....++..++...+.+.|+.++.+ .+..|
T Consensus 268 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~p 316 (397)
T PRK07568 268 PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV-VCEKP 316 (397)
T ss_pred CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eecCC
Confidence 34433333333333 2 2233355677778888999887754 44444
No 105
>PRK06207 aspartate aminotransferase; Provisional
Probab=98.60 E-value=2e-06 Score=78.67 Aligned_cols=109 Identities=17% Similarity=0.082 Sum_probs=68.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cCCCc----EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-ELGAD----IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~GAD----ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|++||+|+++.--.+ ..++ .+..| |++.|++|.++-.|..+|. ++. ++++.+++..........
T Consensus 206 ~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~-ii~-~~~l~~~~~~~~~~~~~~ 283 (405)
T PRK06207 206 LARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGV-AFG-SPAIIDRMEKLQAIVSLR 283 (405)
T ss_pred HHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEE-EEc-CHHHHHHHHHHHhHhccC
Confidence 36789999999999853211 1112 22222 8999999999856777765 444 456777776665544433
Q ss_pred CChHhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 72 LAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 72 ~sp~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+......+.+-++ .+..++++..++...+.++|++++.+
T Consensus 284 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 327 (405)
T PRK06207 284 AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGV 327 (405)
T ss_pred CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 44433333333332 35666777777788888999887654
No 106
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=98.59 E-value=3e-06 Score=77.25 Aligned_cols=180 Identities=19% Similarity=0.157 Sum_probs=96.9
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH---------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--------------- 64 (223)
+||++|++++||++.+.+.. .+.-++|+|+++.|.+|.++.++ .|++.++++ +.+.+...
T Consensus 189 ~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~G~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~ 264 (406)
T PRK09295 189 LAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTG---IGILYVKEA-LLQEMPPWEGGGSMIATVSLTEG 264 (406)
T ss_pred HHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCC---cEEEEEchH-hHhhCCCcccCCceeeeeecCCc
Confidence 47889999999999865432 22224689999999999765444 366766653 33322110
Q ss_pred -------HHhcCCCCChHhHHHHHhcHHHHHH-----HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 65 -------QNAEGSGLAPFDCWICLRGVKTMAL-----RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 65 -------~~~~g~~~sp~da~ll~~~l~tl~~-----R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
.+....+.+....+-+..+++.+.. ..++..+.+..+.+.|++.|.+ +++-|.
T Consensus 265 ~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~-~~~~~~-------------- 329 (406)
T PRK09295 265 TTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDL-TLYGPQ-------------- 329 (406)
T ss_pred cccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE-EEeCCC--------------
Confidence 0111113333333445555554421 1244445566777778777776 444331
Q ss_pred CCCCeeEEEEeC--CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 027424 133 KGAGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 210 (223)
Q Consensus 133 ~g~ggl~sf~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL 210 (223)
..+++++|.+. ..+...++++.-++. ++-|..-+ .+ .....|. ++.||+|.+.-+.++=
T Consensus 330 -~~~~iv~~~~~~~~~~~~~~~L~~~gI~---v~~g~~c~---~~-----------~~~~~~~-~~~iRiS~~~ynt~~d 390 (406)
T PRK09295 330 -NRLGVIAFNLGKHHAYDVGSFLDNYGIA---VRTGHHCA---MP-----------LMAYYNV-PAMCRASLAMYNTHEE 390 (406)
T ss_pred -CCceEEEEEECCcCHHHHHHHHHhCCeE---Eeccccch---HH-----------HHHHHCC-CCEEEEEccCCCCHHH
Confidence 03579999874 334445555554443 23232100 01 1123443 4789999996544333
Q ss_pred HHHHHHHH
Q 027424 211 ISDLDKAL 218 (223)
Q Consensus 211 ~~dl~~Al 218 (223)
++.|.+||
T Consensus 391 id~l~~~l 398 (406)
T PRK09295 391 VDRLVAGL 398 (406)
T ss_pred HHHHHHHH
Confidence 33444444
No 107
>PRK09064 5-aminolevulinate synthase; Validated
Probab=98.59 E-value=2.1e-06 Score=78.26 Aligned_cols=174 Identities=17% Similarity=0.184 Sum_probs=101.4
Q ss_pred CccccCCEEEEecCCCCCCC-c--------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-S--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~--------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|++||||++++.+++ . ..+....||++.|++|.++.. ||++++ ++++.+.+..... ...
T Consensus 203 l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~----GG~~~~-~~~~~~~l~~~~~~~~~t 277 (407)
T PRK09064 203 LADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM----GGYIAG-SAALVDAVRSYAPGFIFT 277 (407)
T ss_pred HHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc----CceEec-CHHHHHHHHHhCcccccc
Confidence 47899999999999864321 1 112224689999999999854 477765 4556555543322 123
Q ss_pred CCCChHhHHHHHhcHHHHH---HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~---~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
...+|..+..++.+++.+. .+.++..++...+.+.|++.. +. + +| ..++++.|.+++.
T Consensus 278 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~-~~----------------~~~~iv~i~~~~~ 338 (407)
T PRK09064 278 TSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG-IP-V-MP----------------NESHIVPVMVGDP 338 (407)
T ss_pred CcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC-C-CC----------------CCCCEEEEEeCCH
Confidence 3456766666677777653 234667788888888887642 21 1 11 1356777877654
Q ss_pred HHHHHHHhhc----CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHH
Q 027424 147 ALSKHVVETT----KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DVNDLISDLDKAL 218 (223)
Q Consensus 147 ~~~~~f~~~l----~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~~dL~~dl~~Al 218 (223)
..+..+.+.| +++-.. +..|.. + -..+.+|+|+++. |.+.+++.|++++
T Consensus 339 ~~~~~l~~~L~~~~gi~v~~---------~~~p~~------~--------~~~~~lRis~~~~~t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 339 EKCKKASDMLLEEHGIYVQP---------INYPTV------P--------RGTERLRITPTPFHTDEMIDHLVEALVEVW 395 (407)
T ss_pred HHHHHHHHHHHHhCCEEEee---------ECCCCC------C--------CCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 3444444433 333111 111110 0 0135699999954 5666677777766
Q ss_pred hcC
Q 027424 219 RTG 221 (223)
Q Consensus 219 ~~~ 221 (223)
+..
T Consensus 396 ~~~ 398 (407)
T PRK09064 396 ARL 398 (407)
T ss_pred HHc
Confidence 543
No 108
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.58 E-value=4.3e-06 Score=75.73 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=67.2
Q ss_pred CccccCCEEEEecCCCCCCCc---Cc---cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---RP---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---~p---l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|++||+|+++...... .| +. ..-.|++.|+||+++..|..+|.++ + ++.+.+.+.........+.
T Consensus 190 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v-~-~~~~~~~~~~~~~~~~~~~ 267 (384)
T PRK06348 190 IAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI-A-PDYIIETAKIINEGICFSA 267 (384)
T ss_pred HHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeee-c-CHHHHHHHHHHHHhccCCC
Confidence 378899999999998643211 12 21 1235899999999987888876654 4 4567676666655444344
Q ss_pred ChHhHHHHHhcHH---HHHHHH-HHHHhHHHHHHHHHhcCCCe
Q 027424 73 APFDCWICLRGVK---TMALRV-EKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 73 sp~da~ll~~~l~---tl~~R~-~~~~~na~~la~~L~~~p~v 111 (223)
++..-..+...++ ....++ +...++...+.+.|+..|.+
T Consensus 268 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~ 310 (384)
T PRK06348 268 PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNL 310 (384)
T ss_pred CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5544344443333 323333 34456667788888877653
No 109
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.56 E-value=3.3e-06 Score=77.56 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=100.0
Q ss_pred CccccCCEEEEecCCCCCCCc-C--cc-c----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-R--PL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~--pl-~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|++||+|++++--..- + ++ . ...+|+++|+||.++..|..+|.++ . ++++.+.+...........
T Consensus 207 la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii-~-~~~l~~~l~~~~~~~~~~~ 284 (410)
T PRK06290 207 FAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV-G-NELIVKAFATVKDNNDSGQ 284 (410)
T ss_pred HHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEE-e-CHHHHHHHHHHHhccccCC
Confidence 478899999999997532110 1 11 1 1346999999999987788876644 4 5566666665544433333
Q ss_pred ChHhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE-EeCC---
Q 027424 73 APFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGS--- 145 (223)
Q Consensus 73 sp~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf-~~~~--- 145 (223)
+......+.+.++. +....++..++...+.+.|++++ + .+.-| .||++-+ .+.+
T Consensus 285 ~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~p-----------------~g~f~l~v~lp~~~~ 345 (410)
T PRK06290 285 FIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG-F-KAEMP-----------------GGTFYLYVKAPKGTK 345 (410)
T ss_pred cHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC-C-eecCC-----------------CeeeEEEEECCCccc
Confidence 32222333444432 23334555677788888998874 3 33322 3555543 4421
Q ss_pred --------HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHH
Q 027424 146 --------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLIS 212 (223)
Q Consensus 146 --------~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-----lEd~~dL~~ 212 (223)
.+.++.++++-.+.. .|... -++.+||++| -|+.+.+++
T Consensus 346 ~~~~~~~~~~~~~~Ll~~~~v~~-------------~p~~~---------------~~~~lRi~~~~~~~~~~~~~~~~~ 397 (410)
T PRK06290 346 SGIKFENAEEFSQYLIKEKLIST-------------VPWDD---------------AGHFLRFSVTFEAKDEEEEDRILE 397 (410)
T ss_pred cCCCCCCHHHHHHHHHHhCCEEE-------------ECCcc---------------ccCeEEEEEEcccccccchhHHHH
Confidence 122333334433321 12110 0157999998 456789999
Q ss_pred HHHHHHhcCC
Q 027424 213 DLDKALRTGP 222 (223)
Q Consensus 213 dl~~Al~~~~ 222 (223)
-|+++|...+
T Consensus 398 ~l~~~~~~~~ 407 (410)
T PRK06290 398 EIKRRLSDVE 407 (410)
T ss_pred HHHHHHhhcc
Confidence 9999998765
No 110
>PRK07337 aminotransferase; Validated
Probab=98.55 E-value=4.4e-06 Score=75.60 Aligned_cols=107 Identities=20% Similarity=0.133 Sum_probs=65.4
Q ss_pred CccccCCEEEEecCCCCCC----CcCcccCCCc-EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPV----LSRPLELGAD-IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~----~~~pl~~GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+++..-. ...++.++.+ |++.|+||+++.+|..+|. ++.+ +++.+++.......+...++.
T Consensus 191 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~-~~~~-~~l~~~l~~~~~~~~~~~s~~ 268 (388)
T PRK07337 191 AVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGW-LVVP-EALVGTFEKLAQNLFICASAL 268 (388)
T ss_pred HHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheee-eecC-HHHHHHHHHHHHHhccCCChH
Confidence 3678999999999975321 1123334444 5689999999888888765 4444 566677766655444444544
Q ss_pred hHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 76 DCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 76 da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p 109 (223)
..+.+...++ .+....++..++...+.++|+++.
T Consensus 269 ~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~ 307 (388)
T PRK07337 269 AQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG 307 (388)
T ss_pred HHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333333333 232223445566677888898864
No 111
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=98.55 E-value=2.9e-06 Score=76.56 Aligned_cols=106 Identities=13% Similarity=0.027 Sum_probs=65.4
Q ss_pred CccccCCEEEEecCCCCCC-------CcCccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|+++.--. ....+. ..-.|++.|+||.++-+|..+|.++ . ++++.+++.......+..
T Consensus 192 ~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i-~-~~~l~~~~~~~~~~~~~~ 269 (383)
T TIGR03540 192 FAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAV-G-NADLIAGLGKVKTNVDSG 269 (383)
T ss_pred HHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEe-C-CHHHHHHHHHHHHhcccC
Confidence 4788999999999985211 111121 1124788999999987777776644 4 556777766655444333
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++.....+...++. +....++..++...+.++|+++
T Consensus 270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 310 (383)
T TIGR03540 270 VFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI 310 (383)
T ss_pred CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444333334444433 3333456677888899999987
No 112
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=98.53 E-value=3.3e-07 Score=83.28 Aligned_cols=109 Identities=20% Similarity=0.220 Sum_probs=76.6
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------HhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--------NAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--------~~~g~~ 71 (223)
+||++|++++||++++.+. ..+..++|+|+++.|.+|++++.. .+|++++++ ++.+.+.... ..+|.+
T Consensus 183 la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~--~~G~l~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 259 (387)
T PRK09331 183 VAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASA--PSGVLATTE-EYADKVFRTSRKFGVKEVELLGCT 259 (387)
T ss_pred HHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCC--CEEEEEECH-HHHhhcccccCCCcccceeeecee
Confidence 4789999999999998764 345556899999999999998642 467777765 4444443221 113434
Q ss_pred CChHhHHHHHhcHHHHH---HHHHHHHhHHHHHHHHHhcCCCee
Q 027424 72 LAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~---~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
+.+-.++.++.+++.+. .|++++.++++.+.+.|++.|+++
T Consensus 260 ~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 260 LRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 43333666677776543 455778889999999999998764
No 113
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.52 E-value=1.3e-06 Score=79.34 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=100.9
Q ss_pred CccccCCEEEEecCCCCCCCcCc-------ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-------l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++. ++...+ ....+|+++.| |.++|....+ |++++++ ++.+.+...........+
T Consensus 216 l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~i-g~v~~~~-~~~~~l~~~~~~~t~~~~ 290 (401)
T PRK00854 216 LCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPV-SAVLSNS-EVLGVLKPGQHGSTFGGN 290 (401)
T ss_pred HHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCe-EEEEEcH-HHHhcccCCCCCCCCCcC
Confidence 4789999999999984 444332 22357998875 9999754344 5565554 454444321111111247
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHH
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSK 150 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~ 150 (223)
|..++..+..|+.+.. ..++..+++..+.+.|++.+.. .+ ....|.|.++.|++ ++.....
T Consensus 291 ~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~-~~---------------~~~~g~g~~~~i~~~~~~~~~~ 354 (401)
T PRK00854 291 PLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSN-IV---------------REVRGRGLMLAVELEPEAGGAR 354 (401)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccC-ce---------------EEEeccceEEEEEEecCchhHH
Confidence 8888889999988754 3455566666666767654310 01 01245789999987 4333445
Q ss_pred HHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHh
Q 027424 151 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALR 219 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv----GlEd~~dL~~dl~~Al~ 219 (223)
.|.+.|.- .++-. .+ ..++.||++. --|+.+.+++.|++++.
T Consensus 355 ~~~~~L~~--~GV~v--------~~-----------------~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 355 QYCEALKE--RGLLA--------KD-----------------THDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHH--CCeEE--------ec-----------------CCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 66655531 11111 00 0236799995 44567777777777664
No 114
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.52 E-value=3.5e-06 Score=76.93 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=33.6
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGH 42 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~ 42 (223)
+||++|++++||.+.+.+. .++.-++|+|+++-|.+|++.|.
T Consensus 196 ~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~ 238 (406)
T TIGR01814 196 AAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAG 238 (406)
T ss_pred HHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCC
Confidence 4789999999999987664 23434679999999999998643
No 115
>PRK06225 aspartate aminotransferase; Provisional
Probab=98.51 E-value=3.3e-06 Score=76.25 Aligned_cols=182 Identities=16% Similarity=0.118 Sum_probs=95.1
Q ss_pred CccccCCEEEEecCCCCCCC-cCc---ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~p---l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+|+++|+++|+|+++..... ..+ +.....+++.|+||+++..|-.+|+ ++++ +.+.+.++..... ....+...
T Consensus 185 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~-i~~~-~~l~~~~~~~~~~-~~~~~~~~ 261 (380)
T PRK06225 185 IARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGA-VVAT-PDLIEVVKSIVIN-DLGTNVIA 261 (380)
T ss_pred HHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEE-EecC-HHHHHHHHHHHhc-ccCCCHHH
Confidence 37889999999998631000 011 1123468899999999656655554 5454 5566666544321 12234433
Q ss_pred HHHHHhcHH---HHHHHHHH-HHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC-HHHHHH
Q 027424 77 CWICLRGVK---TMALRVEK-QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKH 151 (223)
Q Consensus 77 a~ll~~~l~---tl~~R~~~-~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-~~~~~~ 151 (223)
.......++ .+..++++ ..++...+.+.|+..|.+....+| ..|+++.+++.. .....+
T Consensus 262 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~ 325 (380)
T PRK06225 262 QEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYP----------------SHGNMMVIDISEAGIDPED 325 (380)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCC----------------CCCeEEEEEcccccCCHHH
Confidence 333333332 33344433 345556677888876654221233 146677777621 112233
Q ss_pred HHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhcC
Q 027424 152 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 221 (223)
Q Consensus 152 f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--Ed~~dL~~dl~~Al~~~ 221 (223)
|.+.+.--.+.+.-|... .+ . ..++.+|+|++. |+.+.+++.|.++++++
T Consensus 326 l~~~l~~~gi~v~~g~~~----~~--------------~--~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 326 LVEYLLERKIFVRQGTYT----SK--------------R--FGDRYIRVSFSIPREQVEVFCEEFPDVVETL 377 (380)
T ss_pred HHHHHHHCCEEEcCCccc----Cc--------------C--CCCceEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 433332111111111100 00 0 125689999998 56788888888887643
No 116
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.50 E-value=5.7e-06 Score=75.45 Aligned_cols=108 Identities=15% Similarity=0.058 Sum_probs=67.2
Q ss_pred cccc-CCEEEEecCCCCCCC----cCc-ccC-----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 2 AHAH-GALLLVDNSIMSPVL----SRP-LEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 2 a~~~-g~~lvVDnT~~s~~~----~~p-l~~-----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
|+++ |+++|+|++++.-.+ ..+ ... .--|++.|+||.++-.|..+|. ++. ++++.+.+.........
T Consensus 195 a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~-~~~-~~~~~~~~~~~~~~~~~ 272 (402)
T PRK06107 195 LLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY-AAG-PADLIAAINKLQSQSSS 272 (402)
T ss_pred HHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceee-eec-CHHHHHHHHHHHHhccc
Confidence 6787 999999999842111 011 111 1248899999999767777766 444 45677777766655444
Q ss_pred CCChHhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 71 GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
..++...+.+.+.|+ .+....++..++...+.+.|+.++.+
T Consensus 273 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 273 CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 556554454444442 23333455667777788899887653
No 117
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=98.50 E-value=5e-06 Score=75.19 Aligned_cols=56 Identities=34% Similarity=0.409 Sum_probs=40.0
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l 61 (223)
+||++|++++||++...+.. .+..++|+|+++.|.+|+++ .. .|++.+++ ++.+.+
T Consensus 181 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~---~G~l~~~~-~~~~~l 237 (397)
T TIGR01976 181 LVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFG-PH---MGILWGRP-ELLMNL 237 (397)
T ss_pred HHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcC-Cc---eEEEEEcH-HHHhhC
Confidence 47899999999999754432 34445799999999999985 32 57776665 444433
No 118
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=98.50 E-value=7.6e-06 Score=73.94 Aligned_cols=106 Identities=12% Similarity=0.018 Sum_probs=64.6
Q ss_pred CccccCCEEEEecCCCCCCC----cCc---cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRP---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~p---l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|++||+|+++....+ ..+ +. .+-.|++.|+||.++-+|..+|.++ + ++++.+.+.........+
T Consensus 194 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i-~-~~~l~~~~~~~~~~~~~~ 271 (385)
T PRK09276 194 FAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAV-G-NADLIAGLGKVKSNVDSG 271 (385)
T ss_pred HHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeee-C-CHHHHHHHHHHHhhccCC
Confidence 36889999999999853211 111 11 1235889999999988888887654 4 456767766655444433
Q ss_pred CChHhHHHHHhcHH---HHHHHH-HHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVK---TMALRV-EKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~---tl~~R~-~~~~~na~~la~~L~~~ 108 (223)
.++.....+...++ ....++ ++..++...+.+.|+++
T Consensus 272 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 272 VFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL 312 (385)
T ss_pred CCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44433333334443 222333 44566677788888876
No 119
>PRK08960 hypothetical protein; Provisional
Probab=98.49 E-value=8e-06 Score=73.95 Aligned_cols=107 Identities=16% Similarity=0.091 Sum_probs=65.4
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccCCCc-EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLELGAD-IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+++..-.. ...+....+ |++.|+||.++..|..+|.++ . ++++.+.+...........+..
T Consensus 193 ~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~-~-~~~~~~~~~~~~~~~~~~~s~~ 270 (387)
T PRK08960 193 ALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLV-A-PPAAVPELEKLAQNLYISASTP 270 (387)
T ss_pred HHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEE-c-CHHHHHHHHHHHhhhccCCCHH
Confidence 37889999999999743211 111222223 788999999988888876644 4 4566666665554444344554
Q ss_pred hHHHHHhcHH----H-HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 76 DCWICLRGVK----T-MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 76 da~ll~~~l~----t-l~~R~~~~~~na~~la~~L~~~p 109 (223)
....+...++ . +....++..++...+.+.|+.++
T Consensus 271 ~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 309 (387)
T PRK08960 271 AQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG 309 (387)
T ss_pred HHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333333332 2 33333555667778889998875
No 120
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.48 E-value=7.5e-06 Score=73.44 Aligned_cols=107 Identities=16% Similarity=0.110 Sum_probs=62.7
Q ss_pred CccccCCEEEEecCCCCCC-CcCc---cc---CCC----cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRP---LE---LGA----DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~p---l~---~GA----Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g 69 (223)
+|+++|+++|+|++++.-. ..++ +. .+. -|++.|+||.++..|..+|. ++ .++++.+++...+...+
T Consensus 170 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~-~i-~~~~~~~~~~~~~~~~~ 247 (357)
T TIGR03539 170 WARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGF-VA-GDPALVAELLTVRKHAG 247 (357)
T ss_pred HHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEE-Ee-cCHHHHHHHHHHHhhcc
Confidence 3788999999999985211 0011 11 122 28999999998766766655 54 45567676666555444
Q ss_pred CCCChHhHHHHHhcHHH--HHHHH-HHHHhHHHHHHHHHhcCC
Q 027424 70 SGLAPFDCWICLRGVKT--MALRV-EKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t--l~~R~-~~~~~na~~la~~L~~~p 109 (223)
...++.....+...|+. ...++ ++..++...+.+.|+++.
T Consensus 248 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g 290 (357)
T TIGR03539 248 LMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAG 290 (357)
T ss_pred cCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44455433444444432 22222 444466667778888763
No 121
>PRK07681 aspartate aminotransferase; Provisional
Probab=98.48 E-value=4.4e-06 Score=76.05 Aligned_cols=113 Identities=9% Similarity=0.053 Sum_probs=70.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCc---cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRP---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~p---l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|++||+|++++--.. ..+ +. ..-.|++.|+||.++-+|..+|.++ . ++++.+++.........+
T Consensus 194 ~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i-~-~~~l~~~~~~~~~~~~~~ 271 (399)
T PRK07681 194 FAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI-G-NEEIVRALTQFKSNTDYG 271 (399)
T ss_pred HHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEe-c-CHHHHHHHHHHHhhcccC
Confidence 37889999999999852211 111 11 1134889999999987888877654 4 556777776655544444
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.+....+.+...++. +..+.++..++...+.+.|+++. + ++..|
T Consensus 272 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~p 319 (399)
T PRK07681 272 VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-W-NVDKP 319 (399)
T ss_pred CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C-cccCC
Confidence 555444444444433 33334555677778889998873 4 44444
No 122
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.47 E-value=1.9e-07 Score=84.68 Aligned_cols=85 Identities=25% Similarity=0.269 Sum_probs=65.7
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+||++|+|++||.+-+.++ .+..++.|||+|+.|..|.++|+ ++|.++++ +++.++++...-..+.-.++.
T Consensus 182 ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGP---qaGii~Gk-KelI~~lq~~~l~Ralrv~K~ 257 (395)
T COG1921 182 IAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGP---QAGIIVGK-KELIEKLQSHPLKRALRVDKE 257 (395)
T ss_pred HHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCC---ccceEech-HHHHHHHHhhhhhhhhhcCcH
Confidence 5899999999999987742 35567899999999999999998 59988765 567777766544444456776
Q ss_pred hHHHHHhcHHHHHH
Q 027424 76 DCWICLRGVKTMAL 89 (223)
Q Consensus 76 da~ll~~~l~tl~~ 89 (223)
.-..+.++|+.+..
T Consensus 258 tla~l~~aLe~y~~ 271 (395)
T COG1921 258 TLAALEAALELYLQ 271 (395)
T ss_pred hHHHHHHHHHHHcC
Confidence 67778888887643
No 123
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=98.47 E-value=1.1e-05 Score=73.59 Aligned_cols=115 Identities=13% Similarity=0.022 Sum_probs=67.9
Q ss_pred CccccCCEEEEecCCCCCCCc----Cc-ccCCC---cEEEecccccccCCcccceeEEEecChh-----HHHHHHHHHHh
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RP-LELGA---DIVMHSATKFIAGHSDVMAGVLAVKGER-----LAKELYFLQNA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~p-l~~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~~-----~~~~l~~~~~~ 67 (223)
+|+++|+++|+|+++..-... .+ ..+-. =|++.|+||.++..|..+|.++..+++. +.+.+......
T Consensus 197 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~ 276 (403)
T TIGR01265 197 VARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR 276 (403)
T ss_pred HHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh
Confidence 378899999999997532211 11 11212 2788999999988888988766544422 22223322221
Q ss_pred cCCCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 68 EGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
....++.....+...++ .+....++..++...+.+.|+.+|.+ ++..|
T Consensus 277 -~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~p 329 (403)
T TIGR01265 277 -ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGL-VCPKP 329 (403)
T ss_pred -hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eecCC
Confidence 11234444444444443 23444567777888899999988765 44444
No 124
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.46 E-value=7.6e-06 Score=74.09 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=78.2
Q ss_pred CccccCCEEEEecCCCCC--CCcCcccCCCcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~--~~~~pl~~GADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|++||+|++++-. +.-+|+.-..|+.+-|.+ |.++. + .||+++.+++++.++++.++..
T Consensus 141 la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l~~-g--~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 217 (375)
T PRK11706 141 LAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTA-G--EGGALLINDPALIERAEIIREKGTNRSQFFR 217 (375)
T ss_pred HHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCccccc-c--CCeEEEECCHHHHHHHHHHHHcCCCcchhhc
Confidence 478999999999997543 344455444799998876 99963 2 3677778888887776655431
Q ss_pred ----------cCCC--CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 68 ----------EGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 68 ----------~g~~--~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
.|.. ++...+.++...++.+....++..+++..+.+.|++.+.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~ 272 (375)
T PRK11706 218 GQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAE 272 (375)
T ss_pred cCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 1221 345667777888888888889999999999999988763
No 125
>PRK14012 cysteine desulfurase; Provisional
Probab=98.46 E-value=4.4e-06 Score=76.15 Aligned_cols=190 Identities=18% Similarity=0.156 Sum_probs=98.2
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-H------Hh-cCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-Q------NA-EGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~------~~-~g~~ 71 (223)
+||++|++++||.+.+.+.. .+.-+.++|+++.|.+|+++.. ..|+++ ++++... ++... . .. .| +
T Consensus 169 la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~--g~G~l~-~~~~~~~-~~~~~~~g~~~~~~~~~g-t 243 (404)
T PRK14012 169 ICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPK--GIGALY-VRRKPRV-RLEAQMHGGGHERGMRSG-T 243 (404)
T ss_pred HHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCC--ceEEEE-EecCCCC-CCCceecCCCccCCccCC-C
Confidence 47899999999999876543 3444568999999999987533 245555 4443221 11110 0 00 11 1
Q ss_pred CChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 72 LAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
.+.....-+-.+++.+ ..+.++..+.+..+.+.|++.|.+. +..+ . + .+ ......++|.+.+.+
T Consensus 244 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~-~~~~-~---~-----~~--~~~~~~~~~~~~~~~ 311 (404)
T PRK14012 244 LPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVY-LNGD-L---E-----QR--VPGNLNVSFNYVEGE 311 (404)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCC-c---c-----cc--CCCEEEEEEeCcCHH
Confidence 1222222222344333 2334666677777777887788763 3211 1 0 00 112234666653322
Q ss_pred HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCC----CCCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 148 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL----TEDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 148 ~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi----~~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
.++..++ .++++-|.. +.|. |..- ......+|+ .++.||+|++. ||++.+++-|++.++
T Consensus 312 ---~~~~~l~--~~~i~~g~~----~~~~---~~~~-~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~ 378 (404)
T PRK14012 312 ---SLIMALK--DLAVSSGSA----CTSA---SLEP-SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIG 378 (404)
T ss_pred ---HHHHhCC--CeEEEchhh----hCCC---CCCC-CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 3444454 233333311 1111 1000 001123454 35799999997 677778887777665
Q ss_pred c
Q 027424 220 T 220 (223)
Q Consensus 220 ~ 220 (223)
.
T Consensus 379 ~ 379 (404)
T PRK14012 379 K 379 (404)
T ss_pred H
Confidence 3
No 126
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=98.45 E-value=4.6e-06 Score=74.27 Aligned_cols=105 Identities=19% Similarity=0.139 Sum_probs=64.2
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH-------------HHH
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-------------LQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-------------~~~ 66 (223)
+||++|+++++|++++-+ ...++.++|+|+++.|++|+++++. -.|++..++ ++.+.+.. ...
T Consensus 149 ~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~--g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 225 (356)
T cd06451 149 LAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPP--GLGPIAFSE-RALERIKKKTKPKGFYFDLLLLLK 225 (356)
T ss_pred HHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCC--CcceeEECH-HHHHHHHhcCCCCceeecHHHHHh
Confidence 478999999999986432 2245556789999999999999763 247776654 45444432 000
Q ss_pred ------hcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcC
Q 027424 67 ------AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 67 ------~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~ 108 (223)
..+.+.++...+-+..+++.+ ....++..+++..+.+.|++.
T Consensus 226 ~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (356)
T cd06451 226 YWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL 278 (356)
T ss_pred hhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 111223333333344555543 233466667788888888765
No 127
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=98.45 E-value=2.5e-06 Score=75.78 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=70.6
Q ss_pred cCCEEEEecCCCCCCCcC--ccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHH
Q 027424 5 HGALLLVDNSIMSPVLSR--PLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 78 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~--pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ 78 (223)
+|+++++|++++ ++... +.. ..-+|++.|++|.++..+-.+ |+++. ++++.++++......+ .++....
T Consensus 173 ~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~-G~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 247 (346)
T TIGR01141 173 EDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRI-GYAIA-NAEIIDALNKVRAPFN--LSRLAQA 247 (346)
T ss_pred CCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhc-eeeec-CHHHHHHHHhccCCCC--CCHHHHH
Confidence 499999999986 22221 211 123488899999997665554 55655 4566666654433222 3443333
Q ss_pred HHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 79 ICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 79 ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
.+...++. +..+.++..++...+.+.|+++|++. | +|. .|..+.|++.
T Consensus 248 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~----------------~g~~~~~~~~ 298 (346)
T TIGR01141 248 AAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPS----------------DANFVLIRFP 298 (346)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCC----------------cCCEEEEecC
Confidence 33333332 34445777888889999999887764 3 341 3567888875
No 128
>PRK02948 cysteine desulfurase; Provisional
Probab=98.44 E-value=5.8e-06 Score=74.53 Aligned_cols=193 Identities=15% Similarity=0.135 Sum_probs=99.8
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH----HHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~----~~~~~g~~~sp~ 75 (223)
+||++|++++||.+.+-+ ...+.-++|+|+++.|++|+++.+| .|.+..+++..+..+.. .......+.++.
T Consensus 163 l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 239 (381)
T PRK02948 163 LLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVP 239 (381)
T ss_pred HHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHH
Confidence 478899999999875432 2334446799999999999987555 35565665421111110 000111233343
Q ss_pred hHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHH
Q 027424 76 DCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH 151 (223)
Q Consensus 76 da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~ 151 (223)
....+..+++.+ ..+.++..++...+.+.|++.+. .|..++ +++ .....+++|.+.+.+ ...
T Consensus 240 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~v~~~~---~~~--------~~~~~i~~~~~~~~~-~~~ 305 (381)
T PRK02948 240 GIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPL--PIEVEG---HST--------SCLPHIIGVTIKGIE-GQY 305 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CEEEeC---CCc--------cCcCCEEEEEeCCCC-HHH
Confidence 344444555443 44456777778888888887752 232211 111 113567888774321 233
Q ss_pred HHhhcCcceeccccCCCC-CCCCCCccccCCCCCHHHHHhcCC----CCCeEEEEecCC----CHHHHHHHHHHHHh
Q 027424 152 VVETTKYFSITVSFGSVK-SLISMPCFMSHASIPVEVRQARGL----TEDLVRISVGIE----DVNDLISDLDKALR 219 (223)
Q Consensus 152 f~~~l~l~~~~~s~G~~~-sli~~p~~~~h~~~~~~~~~~~gi----~~~liRlsvGlE----d~~dL~~dl~~Al~ 219 (223)
+...|.-..+.++-|..- +.+..|. ...+.+|. ..+.||+|+|.. |.+.+++-|++.++
T Consensus 306 ~~~~l~~~gI~v~~g~~c~~~~~~p~---------~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 373 (381)
T PRK02948 306 TMLECNRRGIAISTGSACQVGKQEPS---------KTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGN 373 (381)
T ss_pred HHHhcccCCEEEEchHhcCCCCCCCC---------HHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 333333223333333211 1111110 11123332 247899999944 55666666665554
No 129
>PRK07682 hypothetical protein; Validated
Probab=98.43 E-value=5.6e-06 Score=74.60 Aligned_cols=106 Identities=7% Similarity=0.045 Sum_probs=66.2
Q ss_pred CccccCCEEEEecCCCCCCCc------Cccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++++++|+|+++.....- ..+. ..-.+++.|++|.++-.|..+|.++ . ++++.+++.........+.
T Consensus 182 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~-~-~~~~i~~l~~~~~~~~~~~ 259 (378)
T PRK07682 182 IVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA-A-PVYFSEAMLKIHQYSMMCA 259 (378)
T ss_pred HHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhh-c-CHHHHHHHHHHHHhhccCC
Confidence 378899999999997533211 1111 1235899999999976677776544 4 4567777665544433344
Q ss_pred ChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
++...+.+.+.|+. +....++..++...+.+.|+++
T Consensus 260 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 299 (378)
T PRK07682 260 PTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI 299 (378)
T ss_pred CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 55444444444533 3333455677778888999886
No 130
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.40 E-value=3.6e-05 Score=69.09 Aligned_cols=106 Identities=15% Similarity=0.071 Sum_probs=65.5
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc---CC----CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE---LG----ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~---~G----ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g 69 (223)
+|+++|++||+|++++.-.. ...+. .| --|++.|+||.++..|..+|. ++. ++++.+.+.......+
T Consensus 176 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~-i~~-~~~~~~~~~~~~~~~~ 253 (364)
T PRK07865 176 WARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGF-VAG-DPALVAELLEVRKHAG 253 (364)
T ss_pred HHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEE-Eec-CHHHHHHHHHHHHhcC
Confidence 36889999999999863211 11111 11 239999999999877777665 544 5667777766655555
Q ss_pred CCCChHhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~ 108 (223)
...++.....+.+.++. +....++..++...+.+.|+.+
T Consensus 254 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 295 (364)
T PRK07865 254 MMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA 295 (364)
T ss_pred CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45555444444444432 3333355566677788888875
No 131
>PRK07550 hypothetical protein; Provisional
Probab=98.40 E-value=8.1e-06 Score=73.82 Aligned_cols=109 Identities=12% Similarity=0.073 Sum_probs=66.5
Q ss_pred CccccCCEEEEecCCCCCCC--cCc---cc---CCC-cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL--SRP---LE---LGA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--~~p---l~---~GA-Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ..+ +. .+. .+++.|++|+++..+..+| +++++ +++.+.+.......+..
T Consensus 191 ~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG-~i~~~-~~~~~~~~~~~~~~~~~ 268 (386)
T PRK07550 191 LARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVG-AVVAS-PARIAEIEKFMDTVAIC 268 (386)
T ss_pred HHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceE-eeecC-HHHHHHHHHHHhhcccC
Confidence 47889999999999753211 111 11 111 3779999999975565554 55554 55666666655544444
Q ss_pred CChHhHHHHHhcHHH---HHHHH-HHHHhHHHHHHHHHhcCCCe
Q 027424 72 LAPFDCWICLRGVKT---MALRV-EKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 72 ~sp~da~ll~~~l~t---l~~R~-~~~~~na~~la~~L~~~p~v 111 (223)
.++...+.+.+.++. ...++ ++..++...+.++|++++.+
T Consensus 269 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 312 (386)
T PRK07550 269 APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGW 312 (386)
T ss_pred CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 555545555555443 33333 45566777888999887543
No 132
>PRK09148 aminotransferase; Validated
Probab=98.40 E-value=2.1e-05 Score=71.94 Aligned_cols=107 Identities=15% Similarity=0.058 Sum_probs=64.1
Q ss_pred CccccCCEEEEecCCCCCCC----c-CcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----S-RPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~-~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|++||+|++++--.+ + ....+ +-.|++.|+||.++-+|..+|.++ . ++++.+.+...+.....+
T Consensus 193 ~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v-~-~~~~i~~l~~~~~~~~~~ 270 (405)
T PRK09148 193 FAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV-G-NERLIAALTRVKSYLDYG 270 (405)
T ss_pred HHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeee-C-CHHHHHHHHHHHHHhccC
Confidence 47889999999999753111 1 11111 123678999999988888876654 4 556777776665544333
Q ss_pred CChHhHHHHHhcHH---HH-HHHHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVK---TM-ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~---tl-~~R~~~~~~na~~la~~L~~~p 109 (223)
.++..-..+...|+ .. ....++..++...+.+.|+.+.
T Consensus 271 ~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 312 (405)
T PRK09148 271 AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAG 312 (405)
T ss_pred CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34432233333332 22 2333555677777888888763
No 133
>PRK07777 aminotransferase; Validated
Probab=98.40 E-value=1.9e-05 Score=71.45 Aligned_cols=106 Identities=15% Similarity=0.015 Sum_probs=62.6
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|+++..-.+ ..|+. .+.+|++.|+||+++.+|..+|. ++. ++++.+.+..........
T Consensus 187 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~-~~~-~~~l~~~~~~~~~~~~~~ 264 (387)
T PRK07777 187 LAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGW-ACG-PAPLIAAVRAAKQYLTYV 264 (387)
T ss_pred HHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEE-Eec-CHHHHHHHHHHHhhcccC
Confidence 46889999999999742111 11221 24679999999999877877765 444 445666665544433222
Q ss_pred CChHhHHHHHhcHH---HH-HHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVK---TM-ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~---tl-~~R~~~~~~na~~la~~L~~~ 108 (223)
.++.....+...++ .. ....+...++...+.++|+++
T Consensus 265 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (387)
T PRK07777 265 GGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA 305 (387)
T ss_pred CCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22222222222232 22 222356677777888888875
No 134
>PRK08361 aspartate aminotransferase; Provisional
Probab=98.39 E-value=1.1e-05 Score=73.12 Aligned_cols=114 Identities=16% Similarity=0.144 Sum_probs=66.9
Q ss_pred CccccCCEEEEecCCCCCCCc----Cc---ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~p---l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++++++|+|++++..... .+ +...-++++.|++|.++.+|..+|.++ + ++++.+.+...........+
T Consensus 194 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~-~-~~~~~~~~~~~~~~~~~~~~ 271 (391)
T PRK08361 194 IAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI-A-PEQVIKDMIKLHAYIIGNVA 271 (391)
T ss_pred HHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc-c-CHHHHHHHHHHHhhhccCCC
Confidence 368899999999997532111 11 112346899999999987777776544 4 44566666554443333344
Q ss_pred hHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 74 PFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 74 p~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
+.....+.+.++. +....++..++...+.++|++.|.+ ++..|
T Consensus 272 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~p 320 (391)
T PRK08361 272 SFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHI-KVFEP 320 (391)
T ss_pred hHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCC-eecCC
Confidence 4333333333322 2223344466666788899887764 44434
No 135
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=98.39 E-value=9.5e-06 Score=71.71 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=64.1
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH------------HH--
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------------LQ-- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~------------~~-- 65 (223)
+|+++|++++||++++-+. ..+.-++++|+++.|++|+++|..- .|+++.++ ++.+.+.. +.
T Consensus 150 l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 226 (355)
T TIGR03301 150 VARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPG--FGFVIARR-DLLEASAGNARSLYLDLYDQWAYM 226 (355)
T ss_pred HHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCc--eeEEEECH-HHHHHhhCCCCCceeeHHHHHHHh
Confidence 4789999999999754322 2333456899999999999865421 36776665 44444330 00
Q ss_pred HhcC---CCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCC
Q 027424 66 NAEG---SGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 66 ~~~g---~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p 109 (223)
...+ .+.++...+.+..+++.+ ..+.++..++...+.+.|++.+
T Consensus 227 ~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g 279 (355)
T TIGR03301 227 EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG 279 (355)
T ss_pred hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0001 123433334444555543 4456677788888888888763
No 136
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.39 E-value=2e-05 Score=72.22 Aligned_cols=169 Identities=20% Similarity=0.196 Sum_probs=103.6
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCC--c--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGA--D--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GA--D--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|++||++||.|+.+..-. ...+++..- | |+++|+||+++-.|-.+|+++ ++++++.+.+..++.....+
T Consensus 191 ~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v-~~~~~l~~~~~~~~~~~~~~ 269 (393)
T COG0436 191 LAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV-GPPEELIAALRKLKSYLTSC 269 (393)
T ss_pred HHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEee-cChHHHHHHHHHHHHhcccC
Confidence 4789999999999974322 122333322 3 899999999998888887755 55567777666555544433
Q ss_pred CChHhHHHHHhcHH-----HHHHHH-HHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE-e-
Q 027424 72 LAPFDCWICLRGVK-----TMALRV-EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-T- 143 (223)
Q Consensus 72 ~sp~da~ll~~~l~-----tl~~R~-~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~-~- 143 (223)
.+...=+.....|+ ....++ ++..++...+.+.|++.+.+..+.+| -|++..|. +
T Consensus 270 ~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p-----------------~Ga~Y~~~~i~ 332 (393)
T COG0436 270 APTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPP-----------------EGAFYLFPKIP 332 (393)
T ss_pred CCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCC-----------------CeeEEEEeecC
Confidence 33322222233333 233444 67788888999999999887555556 46666664 3
Q ss_pred ---CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcC--CCCCeEEEEecCCCHHHHHHH
Q 027424 144 ---GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG--LTEDLVRISVGIEDVNDLISD 213 (223)
Q Consensus 144 ---~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g--i~~~liRlsvGlEd~~dL~~d 213 (223)
++.+.+.++++.-++.- .|.+ ..| ...+.||||.+..+ ++|.+-
T Consensus 333 ~~~d~~~f~~~Ll~~~gV~v-------------~PG~------------~Fg~~~g~~~vRis~~~~~-~~l~~a 381 (393)
T COG0436 333 ELLDSEEFAKKLLEEAGVAV-------------VPGS------------GFGEPPGEGYVRLSLATSE-ETLEEA 381 (393)
T ss_pred CCCCHHHHHHHHHHhCCEEE-------------eccc------------ccCCCCCCCeEEEEEecCH-HHHHHH
Confidence 23455666666665431 1221 111 14689999999887 544443
No 137
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=98.39 E-value=3e-06 Score=74.95 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=67.9
Q ss_pred CccccCCEEEEecCCCCCCCcC----c--cc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----P--LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----p--l~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|++++||.+++.+.... + .. .++|.++.|++|+++++. -+|++..+
T Consensus 173 ~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------- 230 (345)
T cd06450 173 LAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------- 230 (345)
T ss_pred HHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH--------------------
Confidence 4789999999999986654211 1 00 278999999999987542 23433332
Q ss_pred hHhHHHHHhc--HHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 74 PFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 74 p~da~ll~~~--l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
....|..++. -+.+..++++..+.++.+.+.|++.|.+ .+..| | .+++++|.+.+
T Consensus 231 ~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~-----~-----------~~~iv~f~~~~ 287 (345)
T cd06450 231 ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGF-ELLGE-----P-----------NLSLVCFRLKP 287 (345)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEecC-----C-----------ceeEEEEEECC
Confidence 1111222222 2345677788889999999999998876 33332 1 36799998844
No 138
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=98.38 E-value=8.1e-06 Score=73.08 Aligned_cols=106 Identities=19% Similarity=0.187 Sum_probs=64.1
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH---------------H
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---------------L 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~---------------~ 64 (223)
+||++|++++||.+.+-+. ..+.-++|+|+++.|.+|+++|+.- .|++..+++ ..+++.. .
T Consensus 154 l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (363)
T TIGR02326 154 LAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPG--FGFVIARQA-ELAACKGNARSLSLDLYDQWRCM 230 (363)
T ss_pred HHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCc--ceEEEECHH-HHHHhhcCCCceeecHHHHHHHH
Confidence 4789999999999864332 2233457899999999999976532 377767654 3333210 0
Q ss_pred HHhcCC---CCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCC
Q 027424 65 QNAEGS---GLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 65 ~~~~g~---~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p 109 (223)
....|. +.++...+-+..+++.+ ..+.++..+++..+.+.|++..
T Consensus 231 ~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g 284 (363)
T TIGR02326 231 EDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG 284 (363)
T ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000010 22333334444455443 3455777888888888888763
No 139
>PRK12414 putative aminotransferase; Provisional
Probab=98.38 E-value=2.5e-05 Score=70.80 Aligned_cols=107 Identities=13% Similarity=0.009 Sum_probs=63.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-C-C-C--cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-L-G-A--DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~-G-A--Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|+++..-.+ ..|+. + + . -|++.|+||.++-.|..+|.++ . ++++.+.+.........+
T Consensus 190 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v-~-~~~l~~~l~~~~~~~~~~ 267 (384)
T PRK12414 190 LTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCL-A-PAELMDEIRKVHQFMVFS 267 (384)
T ss_pred HHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEe-c-CHHHHHHHHHHHhheecC
Confidence 36889999999999753211 11222 1 1 2 3999999999977787876654 4 456666666655433333
Q ss_pred CChHhHHHHHhcHHH--HHHH-HHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVKT--MALR-VEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~t--l~~R-~~~~~~na~~la~~L~~~p 109 (223)
.+....+.+.+.|+. ...+ .++..++...+.+.|+++.
T Consensus 268 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 308 (384)
T PRK12414 268 ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR 308 (384)
T ss_pred CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344333344444432 1112 2444666777888998873
No 140
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=98.38 E-value=1.4e-05 Score=72.95 Aligned_cols=190 Identities=16% Similarity=0.158 Sum_probs=97.6
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-------HHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-------~~~~g~~~ 72 (223)
+||++|++++||++.+.+.. .+.-+.|+|+++-|.+|+++.++ +|+ +.++++... ++... +.....+.
T Consensus 167 l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~G~-l~~~~~~~~-~~~~~~~g~~~~~~~~~gt~ 242 (402)
T TIGR02006 167 ICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKG--IGA-LYVRRKPRV-RLEALIHGGGHERGMRSGTL 242 (402)
T ss_pred HHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCc--eEE-EEEccCCCC-CCCceecCCCccCCccCCCc
Confidence 47899999999999876643 34445799999999999876444 444 545543221 11110 01111122
Q ss_pred ChHhHHHHHhcHHHHH----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHH
Q 027424 73 APFDCWICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 148 (223)
Q Consensus 73 sp~da~ll~~~l~tl~----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~ 148 (223)
+.....-+..+++.+. .+.++..+.+..+.+.|+..|.| ++..+. + . + .+ ....++|.....+
T Consensus 243 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v-~~~~~~-~----~----~-~p-~~~~v~f~~~~~~- 309 (402)
T TIGR02006 243 PTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEV-YLNGDL-E----H----R-VP-GNLNVSFNYVEGE- 309 (402)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCE-EEeCCc-c----c----c-CC-CeEEEEEeCcCHH-
Confidence 3323333445555443 33345555566666677677765 443321 0 0 0 00 1225666632222
Q ss_pred HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 149 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 149 ~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
.+...++ .+.++-|.. |.+ .+.. +....+.+|++ .+.||+|+|. ||++.|++-|++.++
T Consensus 310 --~~~~~l~--~i~v~~G~~----c~~---~~~~-~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~ 376 (402)
T TIGR02006 310 --SLIMALK--DLAVSSGSA----CTS---ASLE-PSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAID 376 (402)
T ss_pred --HHHHhcC--CEEEechhh----cCC---CCCC-ccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 2333343 223333321 111 0100 01122456664 4799999995 567777777776654
No 141
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.38 E-value=2.5e-05 Score=70.94 Aligned_cols=106 Identities=18% Similarity=0.199 Sum_probs=64.8
Q ss_pred CccccCCEEEEecCCCCCCCcC---c---c----cCCCc-----EEEecccccccCCcccceeEEEecChhHHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---P---L----ELGAD-----IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---p---l----~~GAD-----ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~ 65 (223)
+|++++++||+|+++.-..+.. | + ..+.| |++.|+||.++..|..+|. +++ ++.+.+++....
T Consensus 194 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~-~~~-~~~l~~~~~~~~ 271 (396)
T PRK09147 194 LSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGF-VAG-DAALLKKFLLYR 271 (396)
T ss_pred HHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeee-ecC-CHHHHHHHHHHh
Confidence 3678999999999985432111 1 1 12333 9999999998888888866 444 456767776555
Q ss_pred HhcCCCCChHhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~ 108 (223)
...+..+++.........+. .+....++..++...+.+.|+++
T Consensus 272 ~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 317 (396)
T PRK09147 272 TYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV 317 (396)
T ss_pred hhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54444555544333333332 23333455566666777788764
No 142
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.37 E-value=1.7e-05 Score=72.53 Aligned_cols=173 Identities=21% Similarity=0.219 Sum_probs=113.6
Q ss_pred CccccCCEEEEecCCCCCCCc-C--------ccc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--HHhc
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-R--------PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~--------pl~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--~~~~ 68 (223)
+++++|+.|+||++|+.++.= + -++ --.||++.+++|.++. +||.+. .++.+.+.+... .-.+
T Consensus 196 L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs----~Gg~v~-g~~~~~d~L~~~ar~~if 270 (388)
T COG0156 196 LAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS----SGGYIA-GSAALIDYLRNRARPFIF 270 (388)
T ss_pred HHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc----cCceee-CcHHHHHHHHHhCCceec
Confidence 478999999999999876531 1 111 1138999999999993 588775 455665554432 2245
Q ss_pred CCCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 69 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
.++++|..+.-...+++.+ ..|.++..+|+..+.+-++.... +.. ....+++.+.+++
T Consensus 271 StalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~------~~~-------------~s~s~I~pv~~gd 331 (388)
T COG0156 271 STALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGL------VLL-------------PSESPIIPVILGD 331 (388)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC------ccC-------------CCCCCeeeeEeCC
Confidence 6788998777777777776 47778888888777754444332 111 1245777788887
Q ss_pred HHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 146 LALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 146 ~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
...+.++-+.+ +++- +-+.+|... -....+|+++=....++-|+.+.++|..
T Consensus 332 ~~~a~~~s~~l~~~Gi~v---------~~i~~PTVp--------------~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 332 EERALEASRALLEEGIYV---------SAIRPPTVP--------------KGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred HHHHHHHHHHHHHCCeeE---------eeecCCCCC--------------CCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 66666654443 3331 333445321 0235699999999888888888888864
No 143
>PRK08363 alanine aminotransferase; Validated
Probab=98.37 E-value=2.7e-05 Score=70.77 Aligned_cols=111 Identities=14% Similarity=0.060 Sum_probs=63.2
Q ss_pred CccccCCEEEEecCCCCCCCcC---c-ccC-CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc---CC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---P-LEL-GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---GS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---p-l~~-GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~---g~ 70 (223)
+|+++|+++|+|++++.-.+.. + ..+ +.+ |++.|+||.++..|..+|.+++.+++.+.+.+....... ..
T Consensus 194 ~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~ 273 (398)
T PRK08363 194 IAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRL 273 (398)
T ss_pred HHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccc
Confidence 3678999999999975321111 1 111 222 778999999888888887655424555544444322111 11
Q ss_pred CCChHhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 71 GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
..++.....+.+.|. .+....++..++...+.+.|+++|.+
T Consensus 274 ~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 318 (398)
T PRK08363 274 CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGI 318 (398)
T ss_pred cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 234433333333332 23333466667777788899888764
No 144
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=98.36 E-value=2e-06 Score=77.81 Aligned_cols=110 Identities=18% Similarity=0.198 Sum_probs=69.4
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC--ChHhHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCW 78 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~--sp~da~ 78 (223)
+||++|+++++|++.+.++ ..+.++|+|+++.|.||++.|+. +|+++.+ +++.+.++......+..+ ......
T Consensus 174 ~a~~~gi~vivD~a~~~~~-~~~~~~g~D~~~~S~~K~l~gp~---~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (363)
T TIGR01437 174 VAQEHNLPLIVDAAAEEDL-QKYYRLGADLVIYSGAKAIEGPT---SGLVLGK-KKYIEWVKLQSKGIGRAMKVGKENIL 248 (363)
T ss_pred HHHHcCCeEEEECCCCCch-HHHHHcCCCEEEEeCCcccCCCc---eEEEEEc-HHHHHHHHhccCCCcceeccCHHHHH
Confidence 4899999999999997433 34567899999999999999873 6777654 445454432221111111 111112
Q ss_pred HHHhcHHHHH----HHHHHHHhHHHHHHHHHhcCCCeeEEE
Q 027424 79 ICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVKKVN 115 (223)
Q Consensus 79 ll~~~l~tl~----~R~~~~~~na~~la~~L~~~p~v~~V~ 115 (223)
-+..+++.+. .+.++..+++..+.+.|++.|++.-..
T Consensus 249 gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~ 289 (363)
T TIGR01437 249 GLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASI 289 (363)
T ss_pred HHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 2334444442 234556677888999999998875443
No 145
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=98.36 E-value=2.5e-05 Score=70.94 Aligned_cols=107 Identities=10% Similarity=0.071 Sum_probs=61.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cCCCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-ELGAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++++++|+|++++--.+ ..++ +...+ |++.|+||.++-+|..+|.++ .+ +++.+++.........+.+
T Consensus 194 ~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v-~~-~~~~~~~~~~~~~~~~~~~ 271 (391)
T PRK07309 194 VLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIF-AP-AEFTAQLIKSHQYLVTAAT 271 (391)
T ss_pred HHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEE-eC-HHHHHHHHHHHhhcccCCC
Confidence 36889999999999853221 1111 12223 899999999987777776644 44 4566666654433222344
Q ss_pred hHhHHHHHhcHHHH---HHHH-HHHHhHHHHHHHHHhcCC
Q 027424 74 PFDCWICLRGVKTM---ALRV-EKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 74 p~da~ll~~~l~tl---~~R~-~~~~~na~~la~~L~~~p 109 (223)
+..-+.+.+.++.- ..++ ++..++...+.+.|+++.
T Consensus 272 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 311 (391)
T PRK07309 272 TMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG 311 (391)
T ss_pred hHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 44333344444431 1222 344555666777887763
No 146
>PRK08068 transaminase; Reviewed
Probab=98.35 E-value=9.1e-06 Score=73.64 Aligned_cols=107 Identities=13% Similarity=0.027 Sum_probs=64.5
Q ss_pred CccccCCEEEEecCCCCCCC--cC--c-ccC-C---CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL--SR--P-LEL-G---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--~~--p-l~~-G---ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++++++|+|++++--.. .. + +.. + -.|++.|+||.++-.|..+|+++ . ++++.+.+.........+
T Consensus 195 la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~-~-~~~l~~~l~~~~~~~~~~ 272 (389)
T PRK08068 195 FAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV-G-NESVIEAINLLQDHLFVS 272 (389)
T ss_pred HHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEe-c-CHHHHHHHHHHHhhccCC
Confidence 36789999999999842111 11 1 111 1 23899999999987787877654 4 556777776655544444
Q ss_pred CChHhHHHHHhcH----HHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l----~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.++.....+...+ +.+....++..++...+.+.|+.+.
T Consensus 273 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g 314 (389)
T PRK08068 273 LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG 314 (389)
T ss_pred CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4432222233333 2233444566667777888888763
No 147
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.35 E-value=2.6e-05 Score=71.71 Aligned_cols=105 Identities=12% Similarity=0.030 Sum_probs=64.4
Q ss_pred Ccccc-CCEEEEecCCCCCC---CcCcccC--CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAH-GALLLVDNSIMSPV---LSRPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~-g~~lvVDnT~~s~~---~~~pl~~--GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++ +++||+|++++--. ...++.. .--|++.|++|.++ .|..+|. ++. ++++.+++..........++.
T Consensus 240 la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~-~i~-~~~~~~~~~~~~~~~~~~~s~ 316 (431)
T PRK15481 240 LLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAF-VAS-DSATSARLRLRLNSGTQWVSH 316 (431)
T ss_pred HHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEE-EeC-CHHHHHHHHHHHhccccCCCH
Confidence 36777 99999999974211 1222321 12389999999999 8888765 544 456767665444433334566
Q ss_pred HhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~ 108 (223)
...+.+...|+. +....+...++-..+.+.|+++
T Consensus 317 ~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~ 356 (431)
T PRK15481 317 LLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY 356 (431)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 555555555543 1222344566667788888876
No 148
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.35 E-value=2.8e-05 Score=71.86 Aligned_cols=116 Identities=12% Similarity=0.043 Sum_probs=66.9
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-CC---CcEEEecccccccCCcccceeEEEecChhHHH------HHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-LG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAK------ELYFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~G---ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~------~l~~~~~ 66 (223)
+|+++|++||+|+++..-.+ +.|+. ++ -=|++.|+||+++..|-.+|+++...++.+.+ .+.....
T Consensus 218 ~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~ 297 (430)
T PLN00145 218 TARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLN 297 (430)
T ss_pred HHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhc
Confidence 37889999999999853211 11221 11 12899999999888888998866544444332 2222221
Q ss_pred hcCCCCChHhHHHHHhcHH----H-HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 67 AEGSGLAPFDCWICLRGVK----T-MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~----t-l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.....+...-+.+...|+ . +....++..++...+.+.|+.+|.+..+.+|
T Consensus 298 -~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P 352 (430)
T PLN00145 298 -ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKP 352 (430)
T ss_pred -ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence 121222222222333332 2 3444566677778888899887766444455
No 149
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=98.35 E-value=2.9e-05 Score=69.81 Aligned_cols=175 Identities=25% Similarity=0.261 Sum_probs=97.7
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH------------HHH--
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY------------FLQ-- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~------------~~~-- 65 (223)
+||++|++++||.|.+-+.. .+.-++|+|+++-|.+| +.|+.- .|++..+++ ..++++ ...
T Consensus 164 ~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l~gp~G--~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~~ 239 (371)
T PF00266_consen 164 LAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK-LGGPPG--LGFLYVRPE-AIERLRPAKPGGGYLDFPSLQEY 239 (371)
T ss_dssp HHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-TTSSST--EEEEEEEHH-HHHHHHTSSSSSSTTTHHHHHHH
T ss_pred hhhccCCceeEechhccccccccccccccceeeecccc-cCCCCc--hhhheehhh-hhhccccccccccccccccchhc
Confidence 47899999999999876643 44455799999999999 665532 366767763 333331 001
Q ss_pred -------HhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 66 -------NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 66 -------~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
+..+.+.+....+-+..+++-+ ....++..+.+..+.+.|++.|.+ .++-|.- + .
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~-~~~~~~~---~---------~ 306 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGI-EVLGPDD---E---------P 306 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTE-EESSSSC---G---------G
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCce-eEeeecc---c---------c
Confidence 0112233333333344455544 222466777888888899898876 4433311 1 2
Q ss_pred CCCeeEEEEeC--CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-HHHH
Q 027424 134 GAGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDL 210 (223)
Q Consensus 134 g~ggl~sf~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-~~dL 210 (223)
..+++++|.+. +.+...+.++.-++.- +.|..-+ .|. ....++ ++.||+|+|.-+ .+|+
T Consensus 307 ~~~~i~~~~~~~~~~~~~~~~L~~~~I~~---~~G~~~~---~~~-----------~~~~~~-~~~iRvS~~~~nt~~dv 368 (371)
T PF00266_consen 307 RRPSIVSFNLPGSDADDVVKYLEERGIAV---STGSACA---GPS-----------LDILGM-GGVIRVSLHYYNTEEDV 368 (371)
T ss_dssp BGTTEEEEEETTSSHHHHHHHHHHHTEEE---EESTTTC---HHH-----------HHHHHT-TTEEEEE-GTTSSHHHH
T ss_pred cccceEEEeecCCCHHHHHHHHhhcCEEE---eccCccc---HHH-----------HHHhCC-CCEEEEeccCCCCHHHH
Confidence 26899999983 3455666665555542 2232211 111 111121 288999999876 3443
No 150
>PLN02187 rooty/superroot1
Probab=98.34 E-value=2.5e-05 Score=72.93 Aligned_cols=111 Identities=12% Similarity=0.043 Sum_probs=66.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-CCC---cEEEecccccccCCcccceeEEEecChhH---HHHHHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-LGA---DIVMHSATKFIAGHSDVMAGVLAVKGERL---AKELYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~~~---~~~l~~~~~~~g 69 (223)
+|+++|++||+|+.++--.+ +.|+. +.. =|++.|++|.++-.|..+|+++..+++.+ .+.+.......+
T Consensus 232 ~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~ 311 (462)
T PLN02187 232 TARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLD 311 (462)
T ss_pred HHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhcc
Confidence 36889999999999753211 11221 111 27889999999999999887664344332 234444444433
Q ss_pred CC--CChHhHHHHHhcHH----H-HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 70 SG--LAPFDCWICLRGVK----T-MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~----t-l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+ .+...-..+...++ . +....+...++...+.+.|+.+|.+
T Consensus 312 ~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 312 VTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred ccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 22 23333334444443 2 3344466677888899999987754
No 151
>PRK08175 aminotransferase; Validated
Probab=98.32 E-value=3.5e-05 Score=70.01 Aligned_cols=107 Identities=9% Similarity=-0.001 Sum_probs=62.3
Q ss_pred CccccCCEEEEecCCCCCCC----cCc---cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRP---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~p---l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|+++.--.. ..+ +. .+.-|++.|+||.++.+|..+|. ++. ++++.+++.........+
T Consensus 192 ~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~-~~~-~~~l~~~~~~~~~~~~~~ 269 (395)
T PRK08175 192 LAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGF-MVG-NPELVSALARIKSYHDYG 269 (395)
T ss_pred HHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhee-eeC-CHHHHHHHHHHHhhcccC
Confidence 47889999999999742110 111 11 12236789999999878878765 544 456777776655443333
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~p 109 (223)
.++.....+...++. +....++..++...+.+.|++++
T Consensus 270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 311 (395)
T PRK08175 270 TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAG 311 (395)
T ss_pred CCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333222223333332 22223445566777888888763
No 152
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.31 E-value=3.1e-05 Score=70.50 Aligned_cols=115 Identities=13% Similarity=0.001 Sum_probs=63.1
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cCCC---cEEEecccccccCCcccceeEEEecCh----hHHHHHHHHHHhc
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE----RLAKELYFLQNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~----~~~~~l~~~~~~~ 68 (223)
+|+++|+++|+|+++..-.. +.|+ .+-. =|++.|+||.++..|..+|.++..+++ ++.+.+......
T Consensus 196 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~- 274 (401)
T TIGR01264 196 VAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR- 274 (401)
T ss_pred HHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc-
Confidence 36789999999999753211 1121 1111 278999999988888888776543222 222333222221
Q ss_pred CCCCChHhHHHHHhcHH----H-HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 69 GSGLAPFDCWICLRGVK----T-MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~----t-l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
....++.....+...|+ . +....++..++...+.++|+.+|.+ .+..|
T Consensus 275 ~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~-~~~~p 327 (401)
T TIGR01264 275 ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGL-RPVMP 327 (401)
T ss_pred cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cccCC
Confidence 11233333333333332 2 3333456666777888999987653 33344
No 153
>PLN02656 tyrosine transaminase
Probab=98.31 E-value=3.9e-05 Score=70.22 Aligned_cols=110 Identities=11% Similarity=0.086 Sum_probs=65.4
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-CCC---cEEEecccccccCCcccceeEEEec------ChhHHHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-LGA---DIVMHSATKFIAGHSDVMAGVLAVK------GERLAKELYFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~GA---Divv~S~tK~l~G~~d~~~G~v~~~------~~~~~~~l~~~~~ 66 (223)
+|+++|++||+|++++--.+ +.|+. +.. =|++.|+||.++..|..+|.++.-+ +.++.+++.....
T Consensus 197 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (409)
T PLN02656 197 TAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFD 276 (409)
T ss_pred HHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHh
Confidence 36889999999999863211 11221 111 2788999999888888887766432 2356566655444
Q ss_pred hcCCCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 67 AEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
..+ ..++..-+.+...++ .+....++..++...+.+.|+..+.+
T Consensus 277 ~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~ 325 (409)
T PLN02656 277 ILG-GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCI 325 (409)
T ss_pred hhc-CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 332 234433344444443 13333455566667788888876643
No 154
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.31 E-value=1.3e-06 Score=82.54 Aligned_cols=193 Identities=21% Similarity=0.197 Sum_probs=112.1
Q ss_pred ccccCCEEEEecCCCCCCCcC------cccCCCcEEEecccccccCCcccceeEEEecCh-hH-HHHHHHHHHhcCCCCC
Q 027424 2 AHAHGALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RL-AKELYFLQNAEGSGLA 73 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~-~~-~~~l~~~~~~~g~~~s 73 (223)
+|+.++++.+|+.++.++.+. .++.|+|+|++|+||.++ +.+|+..++.++. .+ .+++.....+.. +.|
T Consensus 191 ~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~h~-STS 267 (557)
T COG1982 191 LHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMMHQ-STS 267 (557)
T ss_pred HhhcCceEEhhhcCcccccccccCcchhhhcCceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHHHc-cCC
Confidence 567899999999998765433 334699999999999999 7789999998862 22 245555544444 679
Q ss_pred hHhHHHHHhcHHHHHHHH-----HHH----HhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEE
Q 027424 74 PFDCWICLRGVKTMALRV-----EKQ----QDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 140 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R~-----~~~----~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~s 140 (223)
| +|.++.+++. ..++ ++. .+.+..+.+.+++ .+.+ .+.=|.....+.. +.|+.+.
T Consensus 268 P--sY~l~ASlD~-Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~------whgf~~~-- 335 (557)
T COG1982 268 P--SYPLMASLDV-ARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFF-PVLQPEKLDPPTG------WHGFEDY-- 335 (557)
T ss_pred c--hHHHHHHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCe-eeccccccCCccc------ccccccc--
Confidence 9 9999999999 3322 222 3444444444433 2322 1222221100000 3333321
Q ss_pred EEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 141 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 141 f~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
..-.-++|-+|+.-..+.+|=.-..++.. .--|+..+ .+.+--.-++=++.|+++...+++-|.++++.
T Consensus 336 ------~~~~~~lDP~Klti~tp~~Gipg~~v~~~-L~e~gii~----e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 336 ------ADDQYFLDPTKLTITTPEFGIPGAIVAKY-LREHGIIP----EETGDYSNLLLFSPGIGKWQTLVDRLLEFKRR 404 (557)
T ss_pred ------cccceeccccEEEEecCCCCCcHHHHHHH-HHHcCCee----eecCCceeeEEeeeccchHHHHHHHHHHHHHh
Confidence 11123567777765555666433332110 00011110 12233335788889999999999999988873
No 155
>PRK09265 aminotransferase AlaT; Validated
Probab=98.30 E-value=2.4e-05 Score=71.35 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=62.2
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cC--CCc-EEEecccccccCCcccceeEEEecChhH----HHHHHHHHHhc
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-EL--GAD-IVMHSATKFIAGHSDVMAGVLAVKGERL----AKELYFLQNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~--GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~~~----~~~l~~~~~~~ 68 (223)
+|+++|+++|+|+++.--.. ..++ .+ ... |++.|++|.++..|..+|.++...++.+ .+.+... ...
T Consensus 196 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~ 274 (404)
T PRK09265 196 IARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASM 274 (404)
T ss_pred HHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hcc
Confidence 36889999999999742111 0111 11 112 5779999999888888887765444432 2333222 122
Q ss_pred CCCCChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 69 GSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
....+...-+.+...|.. +....++..++...+.+.|+.+|.+ .+..|
T Consensus 275 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~-~~~~p 328 (404)
T PRK09265 275 RLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGV-SCVKP 328 (404)
T ss_pred ccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCC-cccCC
Confidence 223343333333333321 1111234556667788888887654 34434
No 156
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=98.28 E-value=2.9e-05 Score=69.28 Aligned_cols=170 Identities=17% Similarity=0.146 Sum_probs=95.5
Q ss_pred CccccCCEEEEecCCCCCC---CcCc--c---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc----
Q 027424 1 MAHAHGALLLVDNSIMSPV---LSRP--L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~---~~~p--l---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~---- 68 (223)
+||++|++++||++++... ...+ + ..|+|.+.-|.+|+..++ -..|+ ++.+++++.+.+.......
T Consensus 176 l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~-~~~G~-~~~~~~~~~~~l~~~~~~~~~~~ 253 (371)
T PRK13520 176 IALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAP-IPAGG-ILFRDESYLDALAVDTPYLTSKK 253 (371)
T ss_pred HHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCcc-CCceE-EEEcCHHHHHhhcccCccccCCC
Confidence 4789999999999986432 1111 1 248899999999986532 23344 4455555544442111110
Q ss_pred ----CCCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeE
Q 027424 69 ----GSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 139 (223)
Q Consensus 69 ----g~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~ 139 (223)
+.+.++..+..+..+++. +..+.++..+++..+.+.|++. ++.-+..| ..+++
T Consensus 254 ~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----------------~~~~v 315 (371)
T PRK13520 254 QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEP-----------------VLNIV 315 (371)
T ss_pred CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCC-----------------CceEE
Confidence 112222334445555554 3456788888888888888876 44223222 24578
Q ss_pred EEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHH
Q 027424 140 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 215 (223)
Q Consensus 140 sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~ 215 (223)
+|.+.+.+...+.+..-+++ . +.+ . .++.+|+|++. ||.+.+++.|+
T Consensus 316 ~~~~~~~~~v~~~L~~~gi~-v--~~~-------~-------------------~~~~iRis~~~~~t~edi~~~~~~l~ 366 (371)
T PRK13520 316 AFDDPNPDEVREKLRERGWR-V--SVT-------R-------------------CPEALRIVCMPHVTREHIENFLEDLK 366 (371)
T ss_pred EEecCCHHHHHHHHHHCCce-e--ccC-------C-------------------CCCEEEEEEECCCCHHHHHHHHHHHH
Confidence 88775444333333332332 1 100 0 13569999974 56677777776
Q ss_pred HHHh
Q 027424 216 KALR 219 (223)
Q Consensus 216 ~Al~ 219 (223)
+.++
T Consensus 367 ~~~~ 370 (371)
T PRK13520 367 EVKK 370 (371)
T ss_pred HHhh
Confidence 6654
No 157
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.27 E-value=5.8e-05 Score=68.06 Aligned_cols=169 Identities=17% Similarity=0.175 Sum_probs=95.5
Q ss_pred cCCEEEEecCCCCCCCc-CcccC-C---CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 5 HGALLLVDNSIMSPVLS-RPLEL-G---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~-~pl~~-G---ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
+++++|+|+++.-.... .++.+ . -=|++.|+||.++-.|..+|.++ . ++++.+.+...+...+ ++......
T Consensus 183 ~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v-~-~~~l~~~l~~~~~~~~--~~~~~~~~ 258 (364)
T PRK04781 183 GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLI-A-NAELIAVLRRCQAPYP--VPTPCAAL 258 (364)
T ss_pred CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeee-C-CHHHHHHHHhccCCCC--CCHHHHHH
Confidence 47899999998532211 11111 1 12889999999986777886644 4 4567777665544333 33332333
Q ss_pred HHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHh
Q 027424 80 CLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 154 (223)
Q Consensus 80 l~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~ 154 (223)
+...|++ ...++++..++...+.+.|++.|.+..+ +|. .|..+.+++.+.+...+.+.
T Consensus 259 a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~----------------~g~f~~~~~~~~~~~~~~l~ 321 (364)
T PRK04781 259 AEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRV-YPS----------------QGNFLLVRFDDAEAAFQALL 321 (364)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCC----------------CCcEEEEEcCCHHHHHHHHH
Confidence 3444433 3445666777788899999988765444 451 35555556654333333333
Q ss_pred hcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHh
Q 027424 155 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALR 219 (223)
Q Consensus 155 ~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-~~dL~~dl~~Al~ 219 (223)
.-++. + - |.. .+ .+ .++.+||++|..+ .+.|++-|++-.+
T Consensus 322 ~~gI~-v--~----------~~~--~~---------~~-~~~~~Ris~~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 322 AAGVV-V--R----------DQR--AA---------PR-LSDALRITLGTPEQNDRVLAALQRTQA 362 (364)
T ss_pred HCCeE-E--e----------eCC--CC---------CC-CCCeEEEeCCCHHHHHHHHHHHHHHHh
Confidence 33332 1 1 110 00 01 2467999999764 4677777766443
No 158
>PRK05942 aspartate aminotransferase; Provisional
Probab=98.27 E-value=7.4e-05 Score=67.87 Aligned_cols=106 Identities=11% Similarity=0.044 Sum_probs=62.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCc---cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRP---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~p---l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|++||+|++++-... ..+ +. ....|++.|+||.++..|..+|.+ +. ++++.++++........+
T Consensus 198 ~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i-~~-~~~l~~~l~~~~~~~~~~ 275 (394)
T PRK05942 198 FARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFV-VG-NRHIIQGLRTLKTNLDYG 275 (394)
T ss_pred HHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeee-ec-CHHHHHHHHHHHhhcccC
Confidence 37889999999999742111 011 11 123488899999997677777654 44 456777777665543333
Q ss_pred CChHhHHHHHhcHH---HHHHHH-HHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVK---TMALRV-EKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~---tl~~R~-~~~~~na~~la~~L~~~ 108 (223)
.+......+...++ ....++ ++..++...+.+.|+..
T Consensus 276 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (394)
T PRK05942 276 IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL 316 (394)
T ss_pred CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 44433334444443 222333 33445556677778765
No 159
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=98.26 E-value=6e-06 Score=73.72 Aligned_cols=81 Identities=15% Similarity=0.074 Sum_probs=47.3
Q ss_pred CccccCCEEEEecCCCCCCC--cCccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 1 MAHAHGALLLVDNSIMSPVL--SRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--~~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+|+++|+++++|+++..... ..++. ..--+++.|++|.++..|..+|. +++ ++++.+.+.......+ +++..
T Consensus 183 l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~-~~~-~~~~~~~~~~~~~~~~--~~~~~ 258 (361)
T PRK00950 183 ILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGY-GFV-PEWLIDYYMRAKTPFS--LTRLS 258 (361)
T ss_pred HHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcch-hcC-CHHHHHHHHHhcCCCC--CCHHH
Confidence 36788999999999853221 11221 11127889999999877777655 444 4566665554433332 44544
Q ss_pred HHHHHhcHH
Q 027424 77 CWICLRGVK 85 (223)
Q Consensus 77 a~ll~~~l~ 85 (223)
.+.+.+.++
T Consensus 259 ~~~a~~~l~ 267 (361)
T PRK00950 259 QAAAIAALS 267 (361)
T ss_pred HHHHHHHhc
Confidence 444444443
No 160
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=98.25 E-value=3.6e-05 Score=68.88 Aligned_cols=106 Identities=13% Similarity=0.192 Sum_probs=63.8
Q ss_pred ccccCCEEEEecCCCCCCCcC--c-cc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhH
Q 027424 2 AHAHGALLLVDNSIMSPVLSR--P-LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 77 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~--p-l~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da 77 (223)
+++++..+|+|+++....... + +. ..--|++.|+||.++-.|..+|.++ . ++++.+.+...... ..+++..-
T Consensus 174 ~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v-~-~~~~~~~~~~~~~~--~~~~~~~q 249 (351)
T PRK14807 174 IEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAV-A-NENILKYLNLVKSP--YNINSLSQ 249 (351)
T ss_pred HHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeee-c-CHHHHHHHHHccCC--CCcCHHHH
Confidence 456678899999985432111 1 11 1224899999999975677776544 4 55676666544322 22444433
Q ss_pred HHHHhcHH--HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 78 WICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 78 ~ll~~~l~--tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
+.+.+-++ .+..+++...++...+.+.|++.|.+
T Consensus 250 ~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 250 VIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44444443 34445566667777788888877665
No 161
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=98.24 E-value=6.5e-05 Score=67.19 Aligned_cols=108 Identities=17% Similarity=0.083 Sum_probs=63.5
Q ss_pred CccccCCEEEEecCCCCCCC--------cCccc---CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc-
Q 027424 1 MAHAHGALLLVDNSIMSPVL--------SRPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--------~~pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~- 68 (223)
+||++|++++||++++.... ..++. .|+|.+.-|.+|+..++ -..||++. .++++.+.+.......
T Consensus 178 l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~-~~~G~~~~-~~~~~~~~l~~~~~~~~ 255 (373)
T TIGR03812 178 IALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSP-IPAGGILF-RSKSYLKYLSVDAPYLT 255 (373)
T ss_pred HHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCc-CCceEEEE-eCHHHHhhhcccCcccC
Confidence 47889999999999863321 11222 38899999999975432 23355554 4445544442111111
Q ss_pred C-------CCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 69 G-------SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 69 g-------~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~ 110 (223)
+ .+.++.....+...++. +..+.++..+++..+.+.|++.+.
T Consensus 256 ~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~ 309 (373)
T TIGR03812 256 VKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGF 309 (373)
T ss_pred CCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 01222233344445554 345678888999999999998763
No 162
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=98.24 E-value=9.6e-06 Score=72.65 Aligned_cols=170 Identities=12% Similarity=0.076 Sum_probs=90.5
Q ss_pred cCCEEEEecCCCCCCC----cCcc---cCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 5 HGALLLVDNSIMSPVL----SRPL---ELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~----~~pl---~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+|+++++|+++..... ..++ +.+ -.|++.|++|.++.++..+|. +++ ++++.+.+......++ .++..
T Consensus 185 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~-l~~-~~~~~~~l~~~~~~~~--~~~~~ 260 (367)
T PRK02731 185 PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGY-GIA-PPEIIDALNRVRQPFN--VNSLA 260 (367)
T ss_pred CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceee-eeC-CHHHHHHHHHccCCCC--CCHHH
Confidence 4899999999753221 1111 111 237788999998766666655 544 4566666654433222 34443
Q ss_pred HHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHH
Q 027424 77 CWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 153 (223)
Q Consensus 77 a~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~ 153 (223)
.+.+.+.++. +....+...++...+.+.|++++ + .+ +| ..|+.+.|.+.+.....+|.
T Consensus 261 ~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-~~----------------~~g~~~~i~~~~~~~~~~~~ 321 (367)
T PRK02731 261 LAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-L-EY-IP----------------SVGNFILVDFDDGKDAAEAY 321 (367)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C-cc-CC----------------CCceEEEEECCCCCCHHHHH
Confidence 4444444432 22223444555666777888763 3 22 23 13677888873222234444
Q ss_pred hhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHhc
Q 027424 154 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 220 (223)
Q Consensus 154 ~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~~ 220 (223)
+.|.--.+.+.-|.. .| .++.||+|+|- |+.+.+++-|++.+++
T Consensus 322 ~~L~~~gI~v~~~~~----------------------~~-~~~~iRis~~~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 322 QALLKRGVIVRPVAG----------------------YG-LPNALRITIGTEEENRRFLAALKEFLAA 366 (367)
T ss_pred HHHHHCCEEEEeCCC----------------------CC-CCCeEEEecCCHHHHHHHHHHHHHHHhc
Confidence 443211111111110 11 24679999995 3567777777777665
No 163
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=98.23 E-value=3.7e-05 Score=68.46 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=69.8
Q ss_pred ccccCCEEEEecCCCCCCCcCc--------ccCCCc-EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 2 AHAHGALLLVDNSIMSPVLSRP--------LELGAD-IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~p--------l~~GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
|+++|+++|+|+++......++ ++.+.+ |+++|++|.++-.+..+|.++ + ++++.+.++........
T Consensus 177 ~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~-~-~~~~~~~l~~~~~~~~~-- 252 (363)
T PF00155_consen 177 AREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIV-A-PPELIERLRRFQRSGLS-- 252 (363)
T ss_dssp HHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEE-E-EHHHHHHHHHHHHHTTS--
T ss_pred hcccccceeeeeceeccccCCCccCcccccccccccceeeeecccccccccccccccc-c-hhhhhhhhhhccccccc--
Confidence 6789999999999866443321 122334 999999999987777776544 5 55677777766554432
Q ss_pred ChHhHHHHHhcHHH-------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t-------l~~R~~~~~~na~~la~~L~~~ 108 (223)
+......+...+.+ +..+.++..++...+.+.|+++
T Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 295 (363)
T PF00155_consen 253 SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI 295 (363)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Confidence 44444444444443 3445678888899999999887
No 164
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.23 E-value=5.7e-05 Score=69.15 Aligned_cols=110 Identities=10% Similarity=0.032 Sum_probs=65.1
Q ss_pred CccccCCEEEEecCCCCCCCc----Ccc-cC---CCcEEEecccccccCCcccceeEEEecC----hhHHHHHHHHHHhc
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPL-EL---GADIVMHSATKFIAGHSDVMAGVLAVKG----ERLAKELYFLQNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl-~~---GADivv~S~tK~l~G~~d~~~G~v~~~~----~~~~~~l~~~~~~~ 68 (223)
+|+++|++||+|+++...... .++ .+ .--|++.|+||.++..|..+|.++..++ +++.+.+......
T Consensus 205 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~- 283 (412)
T PTZ00433 205 LCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML- 283 (412)
T ss_pred HHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc-
Confidence 368899999999998632211 111 11 1137889999999888999887665333 2344444443322
Q ss_pred CCCCChHhHHHHHhcHH----HH-HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 69 GSGLAPFDCWICLRGVK----TM-ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~----tl-~~R~~~~~~na~~la~~L~~~p~v 111 (223)
...+++.....+...+. .. ....++..++...+.++|++++.+
T Consensus 284 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 331 (412)
T PTZ00433 284 VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGL 331 (412)
T ss_pred cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 22345543333333332 22 223356667777888999887543
No 165
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.22 E-value=2.3e-05 Score=69.60 Aligned_cols=104 Identities=16% Similarity=0.104 Sum_probs=58.2
Q ss_pred ccccCCEEEEecCCCCCCCcC--cc-cC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 2 AHAHGALLLVDNSIMSPVLSR--PL-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~--pl-~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
|+++|+++|+|+++.-..... ++ .+ .-=|++.|+||.++-.|..+|.++ . ++++.+.+....... .++.
T Consensus 151 a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v-~-~~~li~~l~~~~~~~--~~~~ 226 (332)
T PRK06425 151 CRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIA-T-DDYNMKISRKITEPW--SVCD 226 (332)
T ss_pred HHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeee-c-CHHHHHHHHHcCCCC--ccCH
Confidence 678899999999975332111 11 11 113788999999987788887654 4 456666665432221 1233
Q ss_pred HhHHHHHh-cHHHHHHH-HHHHHhHHHHHHHHHhcCC
Q 027424 75 FDCWICLR-GVKTMALR-VEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 75 ~da~ll~~-~l~tl~~R-~~~~~~na~~la~~L~~~p 109 (223)
.....+.. ..+....+ .++..++...+.+.|+++.
T Consensus 227 ~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g 263 (332)
T PRK06425 227 PAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAMG 263 (332)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 22222211 11222222 3445566677888888763
No 166
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.21 E-value=2e-05 Score=71.61 Aligned_cols=168 Identities=20% Similarity=0.289 Sum_probs=95.7
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++.. +. +.......|++ +++|.++| +-.+|+++ .++ ++.+.+...........+
T Consensus 212 l~~~~~~llI~DEv~~g-~gr~g~~~~~~~~~~~pDi~--t~sK~l~~-G~~ig~~~-~~~-~~~~~~~~~~~~~t~~~~ 285 (398)
T PRK03244 212 ITDRHGALLVLDEVQTG-IGRTGAWFAHQHDGVTPDVV--TLAKGLGG-GLPIGACL-AFG-PAADLLTPGLHGSTFGGN 285 (398)
T ss_pred HHHHcCCEEEEeccccC-CcccchHHhhhhhCCCCCEE--EEchhhhC-CcccEEEE-EcH-HHHhhccCCCCcCCCCCC
Confidence 47899999999999742 21 11112236766 67899985 45666655 444 455544321111112346
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc--CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS--HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~--~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
|..+......|+.+. ...++..+....+.+.|++ +|.+.. .+|.|.++.+++... .+
T Consensus 286 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------------------v~g~g~~~~i~~~~~-~~ 346 (398)
T PRK03244 286 PVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALGHPLVDH------------------VRGRGLLLGIVLTAP-VA 346 (398)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCCceee------------------EeeccEEEEEEEecc-HH
Confidence 766666667766543 2234445555666666765 332211 235788999998432 34
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
.+|.+.+.- .+.-+ .| ..++.||++..+ ||.+.+++-|++++..
T Consensus 347 ~~~~~~l~~--~Gv~~--------~~-----------------~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 347 KAVEAAARE--AGFLV--------NA-----------------VAPDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred HHHHHHHHH--CCeEE--------ee-----------------cCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 445444321 11110 11 013569999665 7888899999988874
No 167
>PRK07908 hypothetical protein; Provisional
Probab=98.21 E-value=0.00016 Score=64.53 Aligned_cols=171 Identities=18% Similarity=0.151 Sum_probs=94.1
Q ss_pred cCCEEEEecCCCCCCC--cCcc---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 5 HGALLLVDNSIMSPVL--SRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~--~~pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
++.++|+|+++.-.+. ..++ +..--|++.|+||.++-.+..+|. ++. ++++.+.+...... ...++.....
T Consensus 167 ~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~-~~~-~~~~~~~~~~~~~~--~~~~~~~~~a 242 (349)
T PRK07908 167 PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGY-ALG-APDVLARLTRGRAH--WPVGTLQLEA 242 (349)
T ss_pred cCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeee-eec-CHHHHHHHHhcCCC--CCccHHHHHH
Confidence 4788999998742111 1122 222247888999998756666554 545 45566665543322 2234432222
Q ss_pred HHhc-----HHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHh
Q 027424 80 CLRG-----VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 154 (223)
Q Consensus 80 l~~~-----l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~ 154 (223)
+..- .+.+....++..++...+.+.|+++ .+ ++..| ..|..+.+.+.+.+...+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~-~~~~p----------------~~g~~~~~~~~~~~~~~~~l~ 304 (349)
T PRK07908 243 IAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GA-RVVDP----------------AAAPFVLVRVPDAELLRKRLR 304 (349)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-Cc-EeccC----------------CCceEEEEECCcHHHHHHHHH
Confidence 2221 2223333455566667778888877 43 34433 136667777754344444444
Q ss_pred hcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHhcC
Q 027424 155 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 221 (223)
Q Consensus 155 ~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~~~ 221 (223)
.-++. +.-|.... +..++.||||+|- |+.+.|++.|++.+.+.
T Consensus 305 ~~gI~---v~~g~~f~---------------------~~~~~~vRis~~~~~~~~~l~~al~~~~~~~ 348 (349)
T PRK07908 305 ERGIA---VRRGDTFP---------------------GLDPDYLRLAVRPRAEVPVLVQALAEILKAG 348 (349)
T ss_pred hCCEE---EEECCCCC---------------------CCCCCeEEEEeCCCccHHHHHHHHHHHHhcc
Confidence 43332 11111100 1135789999996 57899999999887754
No 168
>PLN00175 aminotransferase family protein; Provisional
Probab=98.20 E-value=0.00014 Score=66.77 Aligned_cols=107 Identities=10% Similarity=0.045 Sum_probs=67.9
Q ss_pred CccccCCEEEEecCCCCCCCcC---cc-cC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---PL-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---pl-~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|++||+|+++..-.+.. ++ .+ .--|++.|++|.++..|..+|.++ + ++++.+.+.........+.
T Consensus 215 ~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v-~-~~~l~~~l~~~~~~~~~~~ 292 (413)
T PLN00175 215 LCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAI-A-PPHLTWGVRQAHSFLTFAT 292 (413)
T ss_pred HHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeE-e-CHHHHHHHHHHHhhccCCC
Confidence 4788999999999985322111 11 11 234889999999987787876654 4 4567676666554444445
Q ss_pred ChHhHHHHHhcHH---HH-HHHHHHHHhHHHHHHHHHhcCC
Q 027424 73 APFDCWICLRGVK---TM-ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 73 sp~da~ll~~~l~---tl-~~R~~~~~~na~~la~~L~~~p 109 (223)
++..-+.+.+.|+ .. ....++..++...+.+.|+++.
T Consensus 293 s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 333 (413)
T PLN00175 293 ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG 333 (413)
T ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5544444555553 22 3334566677888889998873
No 169
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=98.19 E-value=9.1e-05 Score=70.00 Aligned_cols=110 Identities=13% Similarity=0.099 Sum_probs=59.4
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCc---EEEecccccccCCcccceeEEEecChhH----HHHHHHHHHhc
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGAD---IVMHSATKFIAGHSDVMAGVLAVKGERL----AKELYFLQNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GAD---ivv~S~tK~l~G~~d~~~G~v~~~~~~~----~~~l~~~~~~~ 68 (223)
+|++++++||+|+++.--.+ .....+..| |++.|++|+++-.|-.+|++++..++++ .+.+..... .
T Consensus 309 ~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~-~ 387 (517)
T PRK13355 309 IAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLAN-M 387 (517)
T ss_pred HHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhc-C
Confidence 37889999999999742111 122223234 3359999998777788877664333333 233322222 2
Q ss_pred CCCCChHhHHHHHhcHH------HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 69 GSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~------tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
..+.+....+.+...|+ ....+.++..++...+.+.|++.|.+
T Consensus 388 ~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 436 (517)
T PRK13355 388 RLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI 436 (517)
T ss_pred cCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 11233322333333332 22222344556667788888877664
No 170
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.18 E-value=0.00012 Score=66.35 Aligned_cols=106 Identities=16% Similarity=0.153 Sum_probs=64.2
Q ss_pred CccccCCEEEEecCCCCCCCc---Cc---c----cCCCc-----EEEecccccccCCcccceeEEEecChhHHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---RP---L----ELGAD-----IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---~p---l----~~GAD-----ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~ 65 (223)
+|++++++||+|+++..-... .+ + ..|.| |++.|+||.++..|..+|. ++. ++++.+++....
T Consensus 193 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~-~i~-~~~l~~~~~~~~ 270 (393)
T TIGR03538 193 LADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGF-VAG-DAEILKAFLRYR 270 (393)
T ss_pred HHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEE-Eec-CHHHHHHHHHHH
Confidence 367899999999998532211 11 1 12322 8999999988877888766 444 456767766655
Q ss_pred HhcCCCCChHhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~ 108 (223)
...+.+.++...+.+...+.. +....++..++...+.+.|+.+
T Consensus 271 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 271 TYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred HhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 544544555444444444421 2233345556666677788765
No 171
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=98.18 E-value=3.5e-05 Score=68.69 Aligned_cols=172 Identities=19% Similarity=0.143 Sum_probs=93.0
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHH-HHHHHH-------HHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFL-------QNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~-~~l~~~-------~~~~g~~ 71 (223)
+||++|++++||++++-+.. .+.-+.|+|+++.|.+|+++-++ .|++..+++.+. ..+... ......+
T Consensus 163 l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (353)
T TIGR03235 163 VLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGT 239 (353)
T ss_pred HHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCC
Confidence 47899999999999765543 33334689999999999864222 466666664221 111100 0011112
Q ss_pred CChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC--
Q 027424 72 LAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-- 145 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-- 145 (223)
.++...+-+..+++-+ ..+.+++.+.+..+.+.|++ +++ ++.-| |+ ....++++|.+.+
T Consensus 240 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~-~~~~~-----~~--------~~~~~i~~~~~~~~~ 304 (353)
T TIGR03235 240 LPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGV-KLNGD-----PA--------ETIPHILNFSIDGVN 304 (353)
T ss_pred CChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCe-EEeCC-----cc--------cccCCEEEEEeCCcC
Confidence 3333333344455443 35557777777788888876 666 33322 11 1146788887743
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCC----CeEEEEe
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE----DLVRISV 202 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~----~liRlsv 202 (223)
.+...+.++. + ++++-|..-+ + . .. .+..-+..+|+++ +.||+|.
T Consensus 305 ~~~v~~~L~~-~---i~v~~g~~~~----~--~-~~-~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 305 SEALIVNLRA-D---AAVSTGSACS----S--S-KY-EPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred HHHHHHHHhC-C---eEEEchhhcC----C--C-CC-CCCHHHHHcCCCHHHhCccEEEeC
Confidence 3444444443 3 3333332111 0 0 00 1123567788865 8899883
No 172
>PRK07683 aminotransferase A; Validated
Probab=98.18 E-value=0.00013 Score=66.21 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=61.7
Q ss_pred CccccCCEEEEecCCCCCCCcC---cc-cC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---PL-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---pl-~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|+++....... ++ .+ +-.|++.|+||.++-.|..+|.++ . ++++.+++.........+.
T Consensus 189 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~-~-~~~l~~~~~~~~~~~~~~~ 266 (387)
T PRK07683 189 VLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLF-A-PSYLAKHILKVHQYNVTCA 266 (387)
T ss_pred HHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEE-c-CHHHHHHHHHHHHhccCCC
Confidence 3678999999999986432111 21 11 235899999999987787887654 4 4566666654433322233
Q ss_pred ChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
++.....+..-++. +....++..++...+.+.|++.
T Consensus 267 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 306 (387)
T PRK07683 267 SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM 306 (387)
T ss_pred ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33332333333321 2222344556667777888765
No 173
>PTZ00377 alanine aminotransferase; Provisional
Probab=98.17 E-value=0.0002 Score=67.07 Aligned_cols=115 Identities=14% Similarity=0.086 Sum_probs=64.0
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcc-----cCCCc-------EEEecccccccC-CcccceeEEEe-cChhHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPL-----ELGAD-------IVMHSATKFIAG-HSDVMAGVLAV-KGERLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl-----~~GAD-------ivv~S~tK~l~G-~~d~~~G~v~~-~~~~~~~~l 61 (223)
+|+++|++||+|+.+.--.+ +.++ .+..+ |+++|+||.+.| .|-.+|+++.. .++++.+++
T Consensus 246 ~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l 325 (481)
T PTZ00377 246 FCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQI 325 (481)
T ss_pred HHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHH
Confidence 47889999999999753211 1111 11111 788999998533 56677665532 366777777
Q ss_pred HHHHHhcCCCCChHhHHHHHhcH----------HHHHHHHH----HHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 62 YFLQNAEGSGLAPFDCWICLRGV----------KTMALRVE----KQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 62 ~~~~~~~g~~~sp~da~ll~~~l----------~tl~~R~~----~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
........ +.++..-+.+...+ +.+...++ +..++...+.+.|+++|.+ ++.-|
T Consensus 326 ~~~~~~~~-~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~-~~~~p 393 (481)
T PTZ00377 326 YKLASINL-CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGV-SCQPV 393 (481)
T ss_pred HHHhheec-CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-EeecC
Confidence 66543221 23333222333333 22322332 2356777788999888765 34434
No 174
>PRK08912 hypothetical protein; Provisional
Probab=98.17 E-value=9.1e-05 Score=67.02 Aligned_cols=107 Identities=14% Similarity=0.020 Sum_probs=63.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++++++|+|++++.-.+ ..|+. .+-+|++.|+||.++-+|..+|. ++.+ +++.+.+.......+.+
T Consensus 187 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~-~~~~-~~~~~~l~~~~~~~~~~ 264 (387)
T PRK08912 187 FCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGF-VCAA-PPLLRVLAKAHQFLTFT 264 (387)
T ss_pred HHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEE-EecC-HHHHHHHHHHHhhcccc
Confidence 36889999999999742111 11111 13579999999999867777765 4444 45666665554443333
Q ss_pred CChHhHHHHHhcHH---H-HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVK---T-MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~---t-l~~R~~~~~~na~~la~~L~~~p 109 (223)
.++.....+...+. . +....++..++...+.+.|+.+.
T Consensus 265 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 306 (387)
T PRK08912 265 TPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG 306 (387)
T ss_pred CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44432333333332 2 22223556677777888898773
No 175
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.16 E-value=4.5e-05 Score=68.87 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=61.6
Q ss_pred cCCEEEEecCCCCCCCcCc---ccCCC-cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 5 HGALLLVDNSIMSPVLSRP---LELGA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~p---l~~GA-Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+++++|+|+++.......+ +...- =|++.|+||.++..|..+|.++ . ++++.+.+...+... .++...-...
T Consensus 198 ~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v-~-~~~l~~~l~~~~~~~--~~~~~~q~a~ 273 (374)
T PRK02610 198 EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAI-G-HPELIAVLEKVRLPY--NLPSFSQLAA 273 (374)
T ss_pred CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeee-c-CHHHHHHHHHhcCCC--CCCHHHHHHH
Confidence 4899999999853211111 11111 2889999999988888887655 4 556767665544222 2344333333
Q ss_pred HhcH---HHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 81 LRGV---KTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 81 ~~~l---~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
...+ +.+..++++..++...+.+.|+.++.+
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 307 (374)
T PRK02610 274 QLALEHRQELLAAIPEILQERDRLYQALQELPQL 307 (374)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3333 334445555666666677888887765
No 176
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=98.15 E-value=4.6e-05 Score=68.30 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=62.3
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh------------
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------------ 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~------------ 67 (223)
+||++|++++||.+..-+. ..+..++++|+++.|++|++.|..- .|++..++ ++.+++......
T Consensus 156 l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T PRK13479 156 VAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPG--FGFVIARR-SELEACKGNSRSLSLDLYDQWAYM 232 (368)
T ss_pred HHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCC--ceEEEECH-HHHHHhhcCCCCeeecHHHHHhhh
Confidence 4789999999997753221 1233356899999999999876432 27776665 343433211000
Q ss_pred --cC---CCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCC
Q 027424 68 --EG---SGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 68 --~g---~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p 109 (223)
.+ .+.+....+.+..+++.+ ..+.++..+....+.+.|++.+
T Consensus 233 ~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 285 (368)
T PRK13479 233 EKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALG 285 (368)
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 01 122322333344455433 3445777778888888888774
No 177
>PRK05839 hypothetical protein; Provisional
Probab=98.14 E-value=8.5e-05 Score=67.16 Aligned_cols=66 Identities=17% Similarity=0.080 Sum_probs=43.1
Q ss_pred ccccCCEEEEecCCCCCCCcC---c-ccC---------CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc
Q 027424 2 AHAHGALLLVDNSIMSPVLSR---P-LEL---------GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 68 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~---p-l~~---------GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~ 68 (223)
|+++|+++|+|++++--+... + +.. .-=|++.|+||.++..|..+|.++ . ++++.+++.......
T Consensus 184 ~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii-~-~~~~~~~~~~~~~~~ 261 (374)
T PRK05839 184 ALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIA-G-DASILKKYKAYRTYL 261 (374)
T ss_pred HHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEe-c-CHHHHHHHHHHHhhc
Confidence 678999999999975321111 1 110 112889999999888888887755 4 456767766655443
Q ss_pred C
Q 027424 69 G 69 (223)
Q Consensus 69 g 69 (223)
+
T Consensus 262 ~ 262 (374)
T PRK05839 262 G 262 (374)
T ss_pred C
Confidence 3
No 178
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=98.14 E-value=6.9e-05 Score=66.68 Aligned_cols=101 Identities=11% Similarity=0.044 Sum_probs=61.1
Q ss_pred CCEEEEecCCCCCCCcC-c--c-c-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-CCCChHhHHH
Q 027424 6 GALLLVDNSIMSPVLSR-P--L-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWI 79 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~~-p--l-~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g-~~~sp~da~l 79 (223)
++++|+|+++.. +... + + + ..-.+++.|++|.++-.|..+|. ++. ++++.+++........ .+.++...+.
T Consensus 175 ~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~q~~ 251 (353)
T PRK05387 175 DSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGF-AIG-HPELIEALNRVKNSFNSYPLDRLAQAG 251 (353)
T ss_pred CcEEEEeCcccc-cCCcchHHHHhhCCCEEEEEehhHhhcchhhhcee-eec-CHHHHHHHHHhhccCCCCCcCHHHHHH
Confidence 899999999742 2211 1 1 1 13359999999998756666655 544 4566666665543322 2344444444
Q ss_pred HHhcHH---HHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 80 CLRGVK---TMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 80 l~~~l~---tl~~R~~~~~~na~~la~~L~~~p 109 (223)
+.+.++ .+....++..++...+.+.|+++.
T Consensus 252 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 284 (353)
T PRK05387 252 AIAAIEDEAYFEETRAKVIATRERLVEELEALG 284 (353)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 444443 233344666777888889998874
No 179
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.14 E-value=0.00015 Score=65.68 Aligned_cols=106 Identities=10% Similarity=0.022 Sum_probs=60.5
Q ss_pred CccccCCEEEEecCCCCCCC-----cCc-ccC--CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRP-LEL--GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~p-l~~--GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|++||+|+++.--.. ..+ +.+ .-+ |++.|+||.++-.|..+|.++ . ++++.+++.........
T Consensus 193 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v-~-~~~li~~l~~~~~~~~~ 270 (388)
T PRK07366 193 FCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI-G-NAQLIQALRQVKAVVDF 270 (388)
T ss_pred HHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehc-C-CHHHHHHHHHHHhhccc
Confidence 36789999999999742211 111 111 113 678999999987788887654 4 55677777665554433
Q ss_pred CCChHhHHHHHhcH---HHHHHH-HHHHHhHHHHHHHHHhcC
Q 027424 71 GLAPFDCWICLRGV---KTMALR-VEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 71 ~~sp~da~ll~~~l---~tl~~R-~~~~~~na~~la~~L~~~ 108 (223)
...+.-...++..+ +....+ .+...++...+.+.|+++
T Consensus 271 ~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~ 312 (388)
T PRK07366 271 NQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI 312 (388)
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 32221111122222 222223 345556666788888877
No 180
>PLN02880 tyrosine decarboxylase
Probab=98.14 E-value=4.3e-05 Score=72.02 Aligned_cols=124 Identities=19% Similarity=0.266 Sum_probs=81.6
Q ss_pred CccccCCEEEEecCCCCCCCcCc-----cc--CCCcEEEecccccccCCcccceeEEEecChhH-HHHHHHHHHhc----
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-----LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAE---- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-----l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~-~~~l~~~~~~~---- 68 (223)
+|+++|+++-||.++|..+...| ++ .+||-++-+.||++..+ .-+|++.+++... ...+..-..++
T Consensus 264 i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P--~~~g~llvr~~~~l~~~~~~~~~Yl~~~~ 341 (490)
T PLN02880 264 IAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN--FDCSLLWVKDRNALIQSLSTNPEFLKNKA 341 (490)
T ss_pred HHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC--ccEEEEEEeCHHHHHHHHccCHHHhcCcc
Confidence 58899999999999988754332 22 27999999999999855 4567777765332 12111101110
Q ss_pred ----------------CCCCChHhHHHH--HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHh
Q 027424 69 ----------------GSGLAPFDCWIC--LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 130 (223)
Q Consensus 69 ----------------g~~~sp~da~ll--~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~ 130 (223)
|.-......|+. ..|.+.+..++++..+.|+.+++.|+++|.++-+.-|
T Consensus 342 ~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~------------- 408 (490)
T PLN02880 342 SQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR------------- 408 (490)
T ss_pred ccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-------------
Confidence 000012233433 3467778899999999999999999999987544432
Q ss_pred hhCCCCeeEEEEe
Q 027424 131 QAKGAGSVLSFLT 143 (223)
Q Consensus 131 ~~~g~ggl~sf~~ 143 (223)
-.++++|.+
T Consensus 409 ----~~~iv~Fr~ 417 (490)
T PLN02880 409 ----IFSLVCFRL 417 (490)
T ss_pred ----ceEEEEEEE
Confidence 256889987
No 181
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=98.14 E-value=1e-05 Score=72.90 Aligned_cols=114 Identities=26% Similarity=0.322 Sum_probs=83.7
Q ss_pred CccccCCEEEEecCCCCC--CCcCcccCCCcEEEecc--cccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~--~~~~pl~~GADivv~S~--tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|++||-|++.+-+ +.-+++---.|+.+-|+ +|.++.. -||+|+++++++.++++.+++.
T Consensus 135 ~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K~i~~g---eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 135 IARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTKIITTG---EGGAVVTNDPELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp HHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTSSS-SS---S-EEEEESTHHHHHHHHHHTBTTEETSECST
T ss_pred HHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCCCCcCC---CCeeEEecHHHHHHHhhhhhccCcCcccccc
Confidence 478999999999996544 33233322359999997 6988633 4899999999998888765421
Q ss_pred ------cC--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 68 ------EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 68 ------~g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.| .-++++.|.+.+..|+.+..++++..+|+..+.+.|++.|.+.....|
T Consensus 212 ~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~ 269 (363)
T PF01041_consen 212 YRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIP 269 (363)
T ss_dssp TEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCG
T ss_pred ccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 11 237888999999999999999999999999999999999987555544
No 182
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.13 E-value=0.00017 Score=65.99 Aligned_cols=109 Identities=13% Similarity=0.006 Sum_probs=61.6
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-CCC---cEEEecccccccCCcccceeEEEecChhHHH------HHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-LGA---DIVMHSATKFIAGHSDVMAGVLAVKGERLAK------ELYFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~------~l~~~~~ 66 (223)
+|+++++++|+|+++..-.. ..|+. +.. =|++.|+||.++..|..+|.++..+++.+.+ .+.....
T Consensus 198 ~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~ 277 (409)
T PLN00143 198 TARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALN 277 (409)
T ss_pred HHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHh
Confidence 36889999999999853211 12222 111 1899999999988898988766434443322 2222222
Q ss_pred hcCCCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 67 AEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
... ..+......+...|+ .+....++..++...+.+.|++.+.
T Consensus 278 ~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 325 (409)
T PLN00143 278 PAP-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPC 325 (409)
T ss_pred ccC-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 111 112222223333332 3444556666677778888887653
No 183
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.12 E-value=4.3e-05 Score=69.27 Aligned_cols=124 Identities=17% Similarity=0.204 Sum_probs=67.7
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHH--HHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL--YFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l--~~~~~~~g~~ 71 (223)
+|+++|+++|+|+++.. + .+.......|++ |++|.+++ +-.+|+ ++.+ +++.+.+ .........+
T Consensus 220 l~~~~~~~li~Dev~~g-~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g~~~g~-~~~~-~~~~~~~~~~~~~~~~t~~ 293 (413)
T cd00610 220 LCRKHGILLIADEVQTG-FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-GLPLGA-VLGR-EEIMDAFPAGPGLHGGTFG 293 (413)
T ss_pred HHHHcCCEEEEeccccC-CCcCcchhhHhhcCCCCCeE--EEcccccC-ccccEE-EEEc-HHHHHhhccCCCCCCCCCC
Confidence 47899999999999743 2 111112234655 67799997 555555 5454 5565554 1111111123
Q ss_pred CChHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 72 LAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
.+|..+......++.+. ...++..++...+.+.|+..... +| ... ...+.|+++.+.+.
T Consensus 294 ~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~----~~-~~~---------~~~~~g~~~~~~~~ 354 (413)
T cd00610 294 GNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEK----HP-LVG---------DVRGRGLMIGIELV 354 (413)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh----CC-cEE---------EeecCceEEEEEEe
Confidence 45655555666666553 23456666666666666543210 11 000 01346889999884
No 184
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.12 E-value=2.5e-05 Score=72.69 Aligned_cols=106 Identities=21% Similarity=0.176 Sum_probs=78.8
Q ss_pred CccccCCEEEEecCCCCC-----------CCcCccc-------CCCcEEEecccccccCCcccceeEEEecChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSP-----------VLSRPLE-------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----------~~~~pl~-------~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~ 62 (223)
+|+++|++|+.|.+..-. +.-+++. -.+|+++.|++|.+.+. +||+++.+++++.++++
T Consensus 206 lA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r 282 (460)
T PRK13237 206 LCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAK 282 (460)
T ss_pred HHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHH
Confidence 479999999999996433 3334432 36999999999999975 49999999999998887
Q ss_pred HHHHhc-CC----CCChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcCC
Q 027424 63 FLQNAE-GS----GLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 63 ~~~~~~-g~----~~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~p 109 (223)
.+.-.+ |. .++..|...+..+|+.. ...++...++++.|++.|++..
T Consensus 283 ~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~G 336 (460)
T PRK13237 283 ELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAAG 336 (460)
T ss_pred HhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHCC
Confidence 764332 32 35556666677777753 3556777889999999998764
No 185
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.12 E-value=6.4e-05 Score=67.65 Aligned_cols=182 Identities=21% Similarity=0.236 Sum_probs=113.0
Q ss_pred CccccCCEEEEecCCCC-----CCCcCcccCCCcEEEecccccccCCcccceeEEEecCh----------h----HHHHH
Q 027424 1 MAHAHGALLLVDNSIMS-----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE----------R----LAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~----------~----~~~~l 61 (223)
||.+.|+.+++|-++-| .+..+|+++ +|||...+||.+-|+- ||++.-+.. + +.+++
T Consensus 212 Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsLRGPR---g~mIFyRkGvk~~~~k~g~~i~ydlE~kI 287 (477)
T KOG2467|consen 212 IADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSLRGPR---GAMIFYRKGVKSIKPKQGKEILYDLEDKI 287 (477)
T ss_pred HHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccccCCc---ceeEEEeccCCcCCCCCCCcceechhhhh
Confidence 57889999999999754 457899995 9999999999999995 777765431 1 22233
Q ss_pred HHH--HHhcCCCCChH--hHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 62 YFL--QNAEGSGLAPF--DCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 62 ~~~--~~~~g~~~sp~--da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
.+. ....| .|. ...-+.-+|+. +....++..+||.++++.|.+... ++.--|- .
T Consensus 288 NfaVFP~lQG---GPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy--~lvtgGT---D--------- 350 (477)
T KOG2467|consen 288 NFAVFPGLQG---GPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGY--KLVTGGT---D--------- 350 (477)
T ss_pred hhhccccccC---CCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCc--eEecCCc---c---------
Confidence 221 12222 232 12223334443 567789999999999999988763 2221111 1
Q ss_pred CCCCeeEEEEeC----CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHH
Q 027424 133 KGAGSVLSFLTG----SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 208 (223)
Q Consensus 133 ~g~ggl~sf~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~ 208 (223)
.-|+-+++. +-..+++.++.+.+-....+..|..|-+.+-. .+.| +|.+.--..+-||.+
T Consensus 351 ---nHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgG------------iRiG-tPAmTsRG~~e~df~ 414 (477)
T KOG2467|consen 351 ---NHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGG------------IRIG-TPAMTSRGFGEEDFE 414 (477)
T ss_pred ---ceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCc------------eecc-chhhcccCccHHHHH
Confidence 235555551 34678899999988777777766666553211 1122 233333345566777
Q ss_pred HHHHHHHHHHh
Q 027424 209 DLISDLDKALR 219 (223)
Q Consensus 209 dL~~dl~~Al~ 219 (223)
.+.+=|.+|.+
T Consensus 415 ~v~~fi~~av~ 425 (477)
T KOG2467|consen 415 KVADFIDRAVK 425 (477)
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 186
>PRK09082 methionine aminotransferase; Validated
Probab=98.11 E-value=0.00013 Score=66.08 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=62.8
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++--.+ ..+..+ .-.|++.|++|.++..|..+|.++ + ++++.+.+.........+
T Consensus 191 ~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv-~-~~~l~~~~~~~~~~~~~~ 268 (386)
T PRK09082 191 LIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCV-A-PAALSAEFRKVHQYNTFT 268 (386)
T ss_pred HHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhh-C-CHHHHHHHHHHHhhhcCC
Confidence 47899999999999742111 111111 235899999999987777776644 4 456766666655433333
Q ss_pred CChHhHHHHHhcHH---H-HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVK---T-MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~---t-l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++.....+..-++ . +....+...++...+.+.|+++
T Consensus 269 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 309 (386)
T PRK09082 269 VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS 309 (386)
T ss_pred CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44433333333332 2 2222345567777788888874
No 187
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.11 E-value=7.9e-05 Score=68.03 Aligned_cols=170 Identities=12% Similarity=0.077 Sum_probs=94.1
Q ss_pred CccccCCEEEEecCCCCCCCcC------cc---cCCCc--EEEecccccccCCcccceeEEE-ecChhHHHHH----HHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR------PL---ELGAD--IVMHSATKFIAGHSDVMAGVLA-VKGERLAKEL----YFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~------pl---~~GAD--ivv~S~tK~l~G~~d~~~G~v~-~~~~~~~~~l----~~~ 64 (223)
+|++||+++|+|+++..-.... ++ ....| |++.|+||.++-.|..+|.+++ ..++++.+++ ...
T Consensus 204 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~ 283 (404)
T PTZ00376 204 VMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLI 283 (404)
T ss_pred HHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHH
Confidence 4788999999999985322111 11 11112 8899999999977889988653 3555544433 222
Q ss_pred HHhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCC
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 134 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g 134 (223)
......+.++...+.+...++. +....++..++...+.+.|+++..-..+.+. ..
T Consensus 284 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~---------------~p 348 (404)
T PTZ00376 284 IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHI---------------IN 348 (404)
T ss_pred HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc---------------cc
Confidence 2222223344444444444432 1111245567777788888876311011110 11
Q ss_pred CCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec---CCCHHHHH
Q 027424 135 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLI 211 (223)
Q Consensus 135 ~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG---lEd~~dL~ 211 (223)
.||++.+.--+.+.++++++.-+++- .| .+ |+|+| -|+.+.++
T Consensus 349 ~gg~f~~~~~~~~~~~~L~~~~~v~v-------------~p-------------------~~--Ris~~~~~~~~~~~~~ 394 (404)
T PTZ00376 349 QIGMFSFTGLTKEQVERLIEKYHIYL-------------LD-------------------NG--RISVAGLTSKNVDYVA 394 (404)
T ss_pred CceEEEecCCCHHHHHHHHHhCCEee-------------cC-------------------CC--eEEEeccCHHhHHHHH
Confidence 56776654334555666665544431 11 12 99997 44577888
Q ss_pred HHHHHHHh
Q 027424 212 SDLDKALR 219 (223)
Q Consensus 212 ~dl~~Al~ 219 (223)
+.|.+.+.
T Consensus 395 ~~l~~~~~ 402 (404)
T PTZ00376 395 EAIHDVVR 402 (404)
T ss_pred HHHHHHHh
Confidence 88887765
No 188
>PLN02409 serine--glyoxylate aminotransaminase
Probab=98.11 E-value=0.00018 Score=65.78 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=62.0
Q ss_pred ccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH------------HH--
Q 027424 2 AHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------------QN-- 66 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~------------~~-- 66 (223)
||++|++++||.+.+.+. ..+.-++|+|+++.|.+|+++|+. -.|+++.++ +..+++... ..
T Consensus 165 ~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~--G~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
T PLN02409 165 CAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPT--GLGIVCASP-KALEASKTAKSPRVFFDWADYLKFY 241 (401)
T ss_pred hhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCC--CcceeEECH-HHHHHHhcCCCCCeecCHHHHHHHH
Confidence 789999999999976432 233445799999999999998753 156666654 444443210 00
Q ss_pred hcC---CCCChH-hHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcC
Q 027424 67 AEG---SGLAPF-DCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 67 ~~g---~~~sp~-da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~ 108 (223)
..| ....+. ..+.+..+++.+ ..+.+++.+.+..+.++|++.
T Consensus 242 ~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~ 292 (401)
T PLN02409 242 KLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW 292 (401)
T ss_pred hcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 112 112222 233444555543 333466667777777777765
No 189
>PLN02822 serine palmitoyltransferase
Probab=98.11 E-value=9.2e-05 Score=69.57 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=65.9
Q ss_pred CccccCCEEEEecCCCCCCCc----------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--Hhc
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~ 68 (223)
+|++||+++++|++++-..+- +.-....||++.|++|.++. .||++++ ++++.+.++... ..+
T Consensus 270 l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~----~GG~i~g-~~~ii~~~~~~~~~~~f 344 (481)
T PLN02822 270 LKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALAT----EGGFCTG-SARVVDHQRLSSSGYVF 344 (481)
T ss_pred HHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhh----CCeEEEc-CHHHHHHHHhcCCceee
Confidence 478999999999998633211 00011468999999999983 3577764 455655544221 123
Q ss_pred CCCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCC
Q 027424 69 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~ 110 (223)
++.++|..+...+.+|+.+ ....++..++...+.+.|++.++
T Consensus 345 sa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g 389 (481)
T PLN02822 345 SASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPG 389 (481)
T ss_pred ccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3344565555555555544 33557778888888888887543
No 190
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=98.10 E-value=9.6e-05 Score=67.25 Aligned_cols=106 Identities=12% Similarity=0.078 Sum_probs=75.5
Q ss_pred CccccCCEEEEecCCCC--CCCcCcccCCCcEEEecccc--cc-cCCcccceeEEEecChhHHHHHHHHHHh--------
Q 027424 1 MAHAHGALLLVDNSIMS--PVLSRPLELGADIVMHSATK--FI-AGHSDVMAGVLAVKGERLAKELYFLQNA-------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s--~~~~~pl~~GADivv~S~tK--~l-~G~~d~~~G~v~~~~~~~~~~l~~~~~~-------- 67 (223)
+|+++|++||+|++.+- .+.-+++..-.|+.+-|+++ .+ .|+ -||+++++++++.++++.++..
T Consensus 141 la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~~g~---~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 217 (376)
T TIGR02379 141 LANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYTSGG---EGGALLINDQAFIERAEIIREKGTNRSQFF 217 (376)
T ss_pred HHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCcCcccC---CceEEEECCHHHHHHHHHHHHhCCCCcccc
Confidence 47899999999999643 34344443334888887644 33 343 2788888888888887765531
Q ss_pred -----------cCC--CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 68 -----------EGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 68 -----------~g~--~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.|. -++...|.+++..|+.+....++..+++....+.|++.+
T Consensus 218 ~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~ 272 (376)
T TIGR02379 218 RGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLE 272 (376)
T ss_pred ccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCC
Confidence 111 134556777888899999999999999999999998765
No 191
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.10 E-value=0.0003 Score=62.54 Aligned_cols=103 Identities=22% Similarity=0.260 Sum_probs=63.7
Q ss_pred ccccCCEEEEecCCCCCCCcCcc-cC-CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhH
Q 027424 2 AHAHGALLLVDNSIMSPVLSRPL-EL-GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 77 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~pl-~~-GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da 77 (223)
|+++|++||+|+++.......++ .+ .-| |++.|+||.++-.|..+|.++ . ++++.+.+....... .+++...
T Consensus 153 ~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v-~-~~~l~~~~~~~~~~~--~~~~~~~ 228 (330)
T PRK05664 153 LAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVL-A-EPALLRALAELLGPW--TVSGPTR 228 (330)
T ss_pred HHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEE-e-CHHHHHHHHHhcCCC--CCCHHHH
Confidence 56789999999998532211111 11 112 899999999987888887655 4 456766665543322 3455444
Q ss_pred HHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcC
Q 027424 78 WICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 78 ~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~ 108 (223)
+.+...|+.. ....++..++...+.+.|+++
T Consensus 229 ~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 229 WLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5555555432 222355556777888888876
No 192
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.09 E-value=6.9e-05 Score=67.67 Aligned_cols=58 Identities=40% Similarity=0.482 Sum_probs=40.6
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCC--cccceeEEEecChhHHH
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGH--SDVMAGVLAVKGERLAK 59 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~--~d~~~G~v~~~~~~~~~ 59 (223)
+||++|++++||.+++.. ...++-++|+|+++.|++|++..+ |--.+|++..++ ++.+
T Consensus 184 la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~-~~~~ 244 (398)
T cd00613 184 IAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK-ELVR 244 (398)
T ss_pred HHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhh-hhHh
Confidence 489999999999986542 445666789999999999998211 123466776554 4433
No 193
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.09 E-value=0.00038 Score=63.45 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=60.2
Q ss_pred CccccCCEEEEecCCCCCCCc----Cc---ccCCCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC-
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RP---LELGAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS- 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~p---l~~GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~- 70 (223)
+|+++++++|+|+.++.-... .+ ++...| |++.|+||.++..|..+|.++ . ++++.+.+.........
T Consensus 203 ~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv-~-~~~li~~~~~~~~~~~~~ 280 (403)
T PRK08636 203 LAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV-G-NKKLVGALKKIKSWLDYG 280 (403)
T ss_pred HHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeee-C-CHHHHHHHHHHHHHhccc
Confidence 478999999999997532111 11 221224 447899999987788887644 4 55676666655443221
Q ss_pred CCChH--hHHHHHhcHHHHHHHH-HHHHhHHHHHHHHHhcC
Q 027424 71 GLAPF--DCWICLRGVKTMALRV-EKQQDNAQKIAEFLASH 108 (223)
Q Consensus 71 ~~sp~--da~ll~~~l~tl~~R~-~~~~~na~~la~~L~~~ 108 (223)
..++. .+..++.+-+....++ +...++...+.+.|+.+
T Consensus 281 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T PRK08636 281 MFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA 321 (403)
T ss_pred CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 22231 1222222223333333 44566667788888876
No 194
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=98.06 E-value=0.00014 Score=64.98 Aligned_cols=101 Identities=18% Similarity=0.159 Sum_probs=59.8
Q ss_pred cCCEEEEecCCCCCCCcC----ccc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 5 HGALLLVDNSIMSPVLSR----PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~----pl~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
+++++|+|+++.. +... ++. ..--|++.|+|| ++..|..+|. ++. ++++.+++...+. ...++....+.
T Consensus 182 ~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~-~i~-~~~~i~~~~~~~~--~~~~~~~~q~~ 255 (356)
T PRK04870 182 APGLVVVDEAYQP-FAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGY-LAG-HPAWIAELDKVRP--PYNVNVLTQAT 255 (356)
T ss_pred CCCEEEEECCchh-hcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhh-hhC-CHHHHHHHHHccC--CCcCCHHHHHH
Confidence 3789999999742 2111 111 122489999999 6666777765 444 4566666654432 22344433333
Q ss_pred HHhc---HHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 80 CLRG---VKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 80 l~~~---l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.... .+.+....++..++...+.+.|+..|++
T Consensus 256 a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 290 (356)
T PRK04870 256 ALFALEHVDVLDAQAAQLRAERTRLAAALAALPGV 290 (356)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3333 3344445567778888888899887765
No 195
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.06 E-value=6.9e-06 Score=74.07 Aligned_cols=105 Identities=22% Similarity=0.276 Sum_probs=46.0
Q ss_pred CccccCCEEEEecCCCC------------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc
Q 027424 1 MAHAHGALLLVDNSIMS------------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~ 68 (223)
+||+||+|+++|-.-|. |-.+..++.|||+|+.|.-|.++|+ |+|.++++ +++.++++...-.-
T Consensus 165 la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGP---QaGiI~Gk-k~lI~~lk~~pl~R 240 (367)
T PF03841_consen 165 LAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGP---QAGIIVGK-KELIEKLKKHPLGR 240 (367)
T ss_dssp HHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS----S-EEEEEE-HHHHHHHHHHHHTT
T ss_pred HHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCC---CeEEEEeC-HHHHHHHhhCCCcc
Confidence 47899999999987521 3345678899999999999999998 79988765 56777766432111
Q ss_pred CCCCChHhHHHHHhcHHHH----------------HHHHHHHHhHHHHHHHHHhcCC
Q 027424 69 GSGLAPFDCWICLRGVKTM----------------ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl----------------~~R~~~~~~na~~la~~L~~~p 109 (223)
..-.+...-..+...|+.+ ....+...+.|++|++.|+...
T Consensus 241 alrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~~ 297 (367)
T PF03841_consen 241 ALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAAL 297 (367)
T ss_dssp T-B--HHHHHHHHHHHHH---------------------------------------
T ss_pred eEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence 1122333333444444432 1222445555666666666544
No 196
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=98.06 E-value=4.3e-05 Score=69.38 Aligned_cols=106 Identities=20% Similarity=0.209 Sum_probs=75.1
Q ss_pred CccccCCEEEEecCCCCCCCcC---cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC--------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-------- 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g-------- 69 (223)
+|+++|++||+|++++.+...+ .-..|.++..-|.+|.+.+. .||+++.+++++.++++.++. .|
T Consensus 143 ~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g---~GG~v~~~~~~~~~~~~~~~~-~G~~~~~~~~ 218 (379)
T PRK11658 143 IGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCA---EGGLVVTDDDELADRLRSLKF-HGLGVDAFDR 218 (379)
T ss_pred HHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCccc---CceEEEECCHHHHHHHHHHHH-cCCCcchhhh
Confidence 4789999999999986543332 23456655555566877753 489888887888777665431 12
Q ss_pred -----------------CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 70 -----------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 70 -----------------~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
..++...+.+.+..++.+....++..+++..+.+.|++.|.
T Consensus 219 ~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 219 QTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPF 276 (379)
T ss_pred hcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 11444567777777888888889999999999999988773
No 197
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=98.05 E-value=0.00014 Score=68.24 Aligned_cols=54 Identities=26% Similarity=0.400 Sum_probs=39.8
Q ss_pred CccccCCEEEEecCCCCC-C-CcCcccCCCcEEEecccccccCCcc---cceeEEEecC
Q 027424 1 MAHAHGALLLVDNSIMSP-V-LSRPLELGADIVMHSATKFIAGHSD---VMAGVLAVKG 54 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~-~~~pl~~GADivv~S~tK~l~G~~d---~~~G~v~~~~ 54 (223)
+||++|++++||.+...+ + ..+|-++|||+++-|.||+++++-. --+|.+.+++
T Consensus 233 ~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~ 291 (481)
T PRK04366 233 IVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE 291 (481)
T ss_pred HHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence 478999999999996422 1 2478899999999999999875521 2256666654
No 198
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.02 E-value=3.7e-05 Score=71.42 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=76.3
Q ss_pred CccccCCEEEEecCCCC--C---------CCcCcc-------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS--P---------VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s--~---------~~~~pl-------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~ 62 (223)
+|+++|++|+.|.+..- - +..+|+ -.+||.++.|+.|..+++ +||+++.+++++.++++
T Consensus 199 lA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r 275 (450)
T TIGR02618 199 LCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAK 275 (450)
T ss_pred HHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHH
Confidence 47999999999998533 1 222344 237999999999999977 59999889999988887
Q ss_pred HHHHhcCC-----CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhcC
Q 027424 63 FLQNAEGS-----GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 63 ~~~~~~g~-----~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~~ 108 (223)
.....++. .++..+-..+..+|+....| .+...++++.|++-|++.
T Consensus 276 ~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 276 ELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred HHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 76544422 34555555566677765444 355566799999999987
No 199
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=98.02 E-value=0.00023 Score=64.33 Aligned_cols=178 Identities=22% Similarity=0.239 Sum_probs=101.5
Q ss_pred CccccCCEEEEecCCCCCC-------CcCccc-CCCc--EEEecccccccCCcccceeEEEecChhHHHH-HHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLE-LGAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~-~GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~-l~~~~~~~g 69 (223)
||.+||+.||.|+=|+--+ .+..+. ..|| |++.|.||+++-.|...+ .++..++++.++ ++.+....+
T Consensus 186 lc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a-~~Ii~n~~lr~~~~~~l~~~~~ 264 (388)
T COG1168 186 LCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCA-YIIISNRELRAKFLKRLKRNGL 264 (388)
T ss_pred HHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhhe-eEEecCHHHHHHHHHHHHHhcC
Confidence 5889999999999985321 111111 2344 888999999997665444 444555555433 333333333
Q ss_pred CCCChHhHHHHHh----cHHHHHHHHHHHHhHHHHHHHHHhcC-CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-
Q 027424 70 SGLAPFDCWICLR----GVKTMALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT- 143 (223)
Q Consensus 70 ~~~sp~da~ll~~----~l~tl~~R~~~~~~na~~la~~L~~~-p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~- 143 (223)
...|.+.--.... |-+-|..-.+-...|-..++++|+++ |.| +|.-|- .--++-+++
T Consensus 265 ~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v-~v~~p~----------------gTYL~WLD~r 327 (388)
T COG1168 265 HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGV-KVTEPQ----------------GTYLAWLDCR 327 (388)
T ss_pred CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCc-EEecCC----------------Cceeeeeecc
Confidence 3344432111111 22223444466678889999999987 676 777661 223444454
Q ss_pred --C-CH-HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHH
Q 027424 144 --G-SL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED--VNDLISDLDKA 217 (223)
Q Consensus 144 --~-~~-~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd--~~dL~~dl~~A 217 (223)
+ +. +..+-+++..++. .|.|..+- + . ..|.+|+-+|.-- .++=++-|.+|
T Consensus 328 ~l~l~d~~l~~~ll~~akVa---l~~G~~FG----~---------------~--g~gf~RlN~acpr~~L~eal~ri~~a 383 (388)
T COG1168 328 ELGLDDSELAEFLLEEAKVA---LSPGSTFG----E---------------E--GSGFVRLNFACPRAILEEALERLKRA 383 (388)
T ss_pred ccCCChHHHHHHHHHhhcEe---ccCCCccC----c---------------C--CCceEEEecCCCHHHHHHHHHHHHHH
Confidence 1 33 4444455666653 34442211 0 0 3589999999764 46667777777
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
|+.
T Consensus 384 l~~ 386 (388)
T COG1168 384 LKK 386 (388)
T ss_pred Hhc
Confidence 765
No 200
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.02 E-value=6e-05 Score=69.34 Aligned_cols=171 Identities=14% Similarity=0.187 Sum_probs=95.4
Q ss_pred CccccCCEEEEecCCCCCCCcCc-----ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-----l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+.+.. +.... ...+....+.+++|.++| +-.+|+++ .+ +++.+.+.........+.+|.
T Consensus 216 l~~~~g~llI~DEv~tg-~gr~G~~~a~~~~~~~pdi~t~~K~l~~-G~piga~~-~~-~~~~~~~~~~~~~~t~~~~p~ 291 (408)
T PRK04612 216 LCDQHDALLVLDEIQCG-MGRTGTLFAHWQEQVTPDIVTLAKALGG-GFPIGAML-AG-PKVAETMQFGAHGTTFGGNPL 291 (408)
T ss_pred HHHHcCCEEEEeccccC-CCcCCchhhhhhcCCCCCEEEEcchhcC-CCceEEEE-EC-HHHHhhhcCCCcCCCCCCCHH
Confidence 47899999999999742 22111 123566677899999985 45566544 44 345444432111111224687
Q ss_pred hHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC--CHH
Q 027424 76 DCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLA 147 (223)
Q Consensus 76 da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~--~~~ 147 (223)
.+......|+.+.. ..++..+....+.+.|++ ++.|..| +|.|.|+.+++. ..+
T Consensus 292 ~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~v------------------rg~Gl~~~i~~~~~~~~ 353 (408)
T PRK04612 292 AAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQV------------------RGRGLMLGAVLAPAHAG 353 (408)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeee------------------eccceEEEEEecCchhh
Confidence 78777777877642 223333333344343432 3333332 478999999983 233
Q ss_pred HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhc
Q 027424 148 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 148 ~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al~~ 220 (223)
.+..|.+.+.- .|.-+ .|. .++.||+. |.-|+++..++.|+++|+.
T Consensus 354 ~a~~i~~~l~~--~Gvlv--------~~~-----------------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 354 QAGAILDLAAE--HGLLL--------LQA-----------------GPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred HHHHHHHHHHH--CCeEE--------eeC-----------------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 45555544321 11000 010 12456665 4556788889999888864
No 201
>PLN02955 8-amino-7-oxononanoate synthase
Probab=98.02 E-value=0.00019 Score=67.32 Aligned_cols=166 Identities=15% Similarity=0.197 Sum_probs=96.9
Q ss_pred CccccCCEEEEecCCCCCCC-c--C------cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-S--R------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~--~------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+++++|+.|+||++++.... . + .+.--.||++.|++|.++.. ||+++++ +++.+.++.... .++
T Consensus 274 L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~----GGfi~gs-~~~~~~l~~~~~~~ifS 348 (476)
T PLN02955 274 LRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH----GGFIACS-KKWKQLIQSRGRSFIFS 348 (476)
T ss_pred HHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc----CceeecH-HHHHHHHHHhCCCCeec
Confidence 46789999999999975432 1 0 11224689999999999854 7887654 455555543221 234
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
..++|-.+.-.+.+++-+ ..|.++..+|...+.+. . |++. ...++.+.+++.
T Consensus 349 talpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~-~-----------G~~~-------------~sPI~pI~ig~~ 403 (476)
T PLN02955 349 TAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL-S-----------GVDI-------------SSPIISLVVGNQ 403 (476)
T ss_pred ccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-c-----------CCCC-------------CCCEEEEEeCCH
Confidence 455665454555555544 34556666666655441 1 2210 267888888887
Q ss_pred HHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 027424 147 ALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DVNDLISDLDKALR 219 (223)
Q Consensus 147 ~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~~dL~~dl~~Al~ 219 (223)
..+..+.+.| +++. +.+..|+.. .....+||++--. |++.|++.|.+..+
T Consensus 404 ~~a~~~~~~L~~~Gi~v---------~~i~yPtVP--------------~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 404 EKALKASRYLLKSGFHV---------MAIRPPTVP--------------PNSCRLRVTLSAAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred HHHHHHHHHHHHCCCEE---------EEECCCCCC--------------CCCceEEEeeCCCCCHHHHHHHHHHHHHHHh
Confidence 7666665554 3332 223334320 1235699999754 45555555555444
No 202
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.01 E-value=7.7e-05 Score=67.99 Aligned_cols=169 Identities=13% Similarity=0.225 Sum_probs=94.0
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++ +.+. ..-.....|+++-| |.++|..--+|+ ++.+ +++.+.+.........+.+
T Consensus 215 l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~-v~~~-~~i~~~~~~~~~~~t~~~~ 289 (401)
T TIGR01885 215 LCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSA-VLAD-DDVMLTIKPGEHGSTYGGN 289 (401)
T ss_pred HHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEE-EEEc-HHHHhhccCCCCCCCCCCC
Confidence 478999999999996 3221 11122357888754 999864344544 4444 5565544321111111235
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCC--CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH---
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHP--RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--- 146 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p--~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--- 146 (223)
|..+......|+.+.. ..++..+.+..+.+.|++.+ .+.. .+|.|.|+.++++..
T Consensus 290 p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~~~~~~------------------~~g~g~~~~i~~~~~~~~ 351 (401)
T TIGR01885 290 PLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPKPIITE------------------VRGRGLLNAIVIDESKTG 351 (401)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccCCceeE------------------EeecCeeEEEEeccCcch
Confidence 7777777777777643 22445555566666666542 1111 135789999888432
Q ss_pred HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHh
Q 027424 147 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKALR 219 (223)
Q Consensus 147 ~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al~ 219 (223)
..+.+|.+.+. ..++-+ .| ..++.+||+ +--|+.+.+++-|+++|+
T Consensus 352 ~~~~~l~~~l~--~~Gv~v--------~~-----------------~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 352 RTAWDLCLKLK--EKGLLA--------KP-----------------THGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred hHHHHHHHHHH--hCCEEE--------Ee-----------------cCCCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 24556665552 122111 11 024578888 455567777777777663
No 203
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.01 E-value=0.00022 Score=64.72 Aligned_cols=175 Identities=15% Similarity=0.127 Sum_probs=93.3
Q ss_pred cccCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccC-CcccceeEEEecChhHHHHHHHH----------------
Q 027424 3 HAHGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAG-HSDVMAGVLAVKGERLAKELYFL---------------- 64 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G-~~d~~~G~v~~~~~~~~~~l~~~---------------- 64 (223)
|++|++++||.+-+-+ ..|++. .+|+++-|.+|+++| +| .|++..+++ ..+++...
T Consensus 161 ~~~g~~~vVDa~qs~G--~~pidv~~iD~~~~s~~K~l~~P~G---~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~~~ 234 (378)
T PRK03080 161 ADREGLTICDATSAAF--ALPLDWSKLDVYTFSWQKVLGGEGG---HGMAILSPR-AVERLESYTPARPIPKFFRLTKGG 234 (378)
T ss_pred ccCCCeEEEecccccc--cCCCCHHHCcEEEEehhhhCCCCCc---eEEEEECHH-HHHhhhcccCCCCCchhheeccch
Confidence 5789999999986443 233332 379999999999998 43 566767654 33333210
Q ss_pred ---H-Hh-cCC-CCCh-HhHHHHHhcHHHHH------HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 65 ---Q-NA-EGS-GLAP-FDCWICLRGVKTMA------LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 65 ---~-~~-~g~-~~sp-~da~ll~~~l~tl~------~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
. .. .|. ...+ ...+.+..+|+.+. .+.++..+.+..+.++|++.+.+ ++.-+ .|.
T Consensus 235 ~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~-~~~~~----~~~------- 302 (378)
T PRK03080 235 KAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWA-TPLVA----DPA------- 302 (378)
T ss_pred HHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCc-ccccC----Ccc-------
Confidence 0 00 111 1222 22333455666542 33456666777777888877643 22211 111
Q ss_pred hCCCCeeEEEEeCC---HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC---
Q 027424 132 AKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE--- 205 (223)
Q Consensus 132 ~~g~ggl~sf~~~~---~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE--- 205 (223)
...+++++|.+.+ ... .+++..+.--.+.+..|+.. -.++.+|+|.+.-
T Consensus 303 -~~s~~i~~~~~~~~~~~~~-~~~~~~l~~~~i~v~~g~~~-----------------------~~~~~vRis~~~~~t~ 357 (378)
T PRK03080 303 -TRSNTSVTLDFVDAQAAVD-AAAVAKLLRENGAVDIEPYR-----------------------DAPNGLRIWCGPTVEP 357 (378)
T ss_pred -ccCccEEEEEcCCchHHHH-HHHHHHHHHcCCeecccccc-----------------------CCCCcEEEecCCCCCH
Confidence 1135689998754 111 12332221001111222210 0236799999964
Q ss_pred -CHHHHHHHHHHHHhc
Q 027424 206 -DVNDLISDLDKALRT 220 (223)
Q Consensus 206 -d~~dL~~dl~~Al~~ 220 (223)
|++.|++-|+++++.
T Consensus 358 ~di~~l~~al~~~~~~ 373 (378)
T PRK03080 358 ADVEALTPWLDWAFER 373 (378)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 667777777777663
No 204
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.00 E-value=9.7e-05 Score=67.28 Aligned_cols=168 Identities=12% Similarity=0.165 Sum_probs=93.1
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++.. +. +.......|+++ ++|.++|.+-.+|+ ++++ +++.+.+...........+
T Consensus 215 l~~~~g~lli~DEv~~g-~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg~~ig~-~~~~-~~i~~~~~~~~~~~t~~~~ 289 (396)
T PRK04073 215 LCKEENVLFIADEIQTG-LGRTGKLFACDWDNVTPDMYI--LGKALGGGVFPISC-VAAN-RDILGVFTPGSHGSTFGGN 289 (396)
T ss_pred HHHHcCCEEEEecchhC-CCcCcHHHHhhhcCCCCCEEE--ecccccCCCCcceE-EEEc-HHHHhhhcCCCCCCCCCCC
Confidence 47899999999999742 21 112223467665 68999976566655 4454 4555544321111112246
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHH
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH 151 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~ 151 (223)
|..+...+..|+.+.. -.++..+....+.+.|++. .+|... ..++.|.++.+++.. .++.
T Consensus 290 ~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l------~~~~i~----------~~~~~g~~~~~~~~~--~~~~ 351 (396)
T PRK04073 290 PLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI------DNPMIK----------EVRGRGLFIGVELNE--PARP 351 (396)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh------cCCccc----------ceecceEEEEEEecc--hHHH
Confidence 7777777777765521 1244444555566666542 123221 123568888888842 2344
Q ss_pred HHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHH
Q 027424 152 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKAL 218 (223)
Q Consensus 152 f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al 218 (223)
|.+.|. ..++- +.| ..++.|||+ +--|+.+.+++-|+++|
T Consensus 352 ~~~~l~--~~Gv~--------~~~-----------------~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 352 YCEALK--EEGLL--------CKE-----------------THETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHH--HCCeE--------Eec-----------------CCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 444431 11111 111 023679998 55677888888888776
No 205
>PRK09105 putative aminotransferase; Provisional
Probab=98.00 E-value=0.00021 Score=64.66 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=57.3
Q ss_pred ccCCEEEEecCCCCCCCcCc--cc---CCCc-EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhH
Q 027424 4 AHGALLLVDNSIMSPVLSRP--LE---LGAD-IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 77 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~~~p--l~---~GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da 77 (223)
++|+++|+|+++.. +...| .. .+.+ |++.|++|.++..|..+|.++ . ++++.+.+... .....+....
T Consensus 195 ~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v-~-~~~~i~~l~~~---~~~~~~~~~~ 268 (370)
T PRK09105 195 PAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAA-A-RPDLLAKLARF---GHNPLPVPAA 268 (370)
T ss_pred CCCcEEEEECchHH-hccCcchHHHHhhCCCEEEEecccHhhcCCccceeeee-c-CHHHHHHHHhc---CCCCcCHHHH
Confidence 45899999999742 21111 21 2334 778899999998888886644 4 45566655443 1112333222
Q ss_pred HHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcC
Q 027424 78 WICLRGVKT---MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 78 ~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~ 108 (223)
......++. +..+.++..++...+.+.|+.+
T Consensus 269 ~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 269 AAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 333333322 2333455666777788888876
No 206
>PRK06836 aspartate aminotransferase; Provisional
Probab=98.00 E-value=0.00016 Score=65.81 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=55.4
Q ss_pred cCCEEEEecCCCCCCC----cCc-cc-CCCcEEEecccccccCCcccceeEEEecChhHHH------HHHHHHHhcCC-C
Q 027424 5 HGALLLVDNSIMSPVL----SRP-LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK------ELYFLQNAEGS-G 71 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~----~~p-l~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~------~l~~~~~~~g~-~ 71 (223)
||+++|+|+++.--.. ..+ ++ ..-.|++.|+||.++.+|..+|.++ .++ .+.+ .+.......+. .
T Consensus 206 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 283 (394)
T PRK06836 206 RPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA-VNP-EMEDADDLVAALVFANRILGFVN 283 (394)
T ss_pred CCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEe-cCH-HHhhhHHHHHHHHHHhhcccccc
Confidence 8999999999852211 001 11 1235999999999987888876644 443 3322 11112222222 2
Q ss_pred CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.++.....+.+-++.- .+.++..++...+.+.|+++.
T Consensus 284 ~~~~~q~~~~~~l~~~-~~~~~~~~~r~~l~~~L~~~g 320 (394)
T PRK06836 284 APALMQRVVAKCLDAT-VDVSIYKRNRDLLYDGLTELG 320 (394)
T ss_pred CCHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHhCC
Confidence 3443333333433321 233445556677788888773
No 207
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=97.99 E-value=5.8e-05 Score=70.14 Aligned_cols=107 Identities=20% Similarity=0.129 Sum_probs=79.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC--CcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G--ADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|++||+|++.+-+...+.-..| .|+.+-|+. |-+.. + -||+|+++++++.++++..++.
T Consensus 181 la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~~fSf~~~k~~~~-g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~ 257 (438)
T PRK15407 181 FCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIATLSFYPAHHITM-G--EGGAVFTNDPLLKKIIESFRDWGRDCWCAPG 257 (438)
T ss_pred HHHHCCCEEEEECccchhhhcCCeeeeccCceEEEeCCCCCCccc-c--CceEEEECCHHHHHHHHHHHHhCcccccccc
Confidence 478999999999987554332322222 399988875 54553 2 2799999998887766554321
Q ss_pred ----------------------------cC--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 68 ----------------------------EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 68 ----------------------------~g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
.| ..++...|.+.+..|+.+..++++..+|+..+.+.|++.|.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 258 CDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 12 13577788899999999999999999999999999998774
No 208
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=97.98 E-value=0.00013 Score=66.53 Aligned_cols=105 Identities=14% Similarity=0.076 Sum_probs=60.6
Q ss_pred CccccCCEEEEecCCCCCCCc---Cccc---CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---RPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---~pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|++++++||+|++++.++.. .... .+-=|++.|+||+ +..|..+|. ++. ++++.+++.........+.+.
T Consensus 207 ~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~-~i~-~~~l~~~~~~~~~~~~~~~s~ 283 (416)
T PRK09440 207 LARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGI-VIA-DEEIIEALSNMNGIISLAPGR 283 (416)
T ss_pred HHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEE-EeC-CHHHHHHHHHHHHHhccCCCc
Confidence 367899999999999743211 1111 1112888999996 777777765 444 556777776665554444565
Q ss_pred HhHHHHHhcHHH--HHHH----H-HHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVKT--MALR----V-EKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~t--l~~R----~-~~~~~na~~la~~L~~~ 108 (223)
.....+.+.++. +..+ + +...++...+.++|+++
T Consensus 284 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 284 LGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555555543 2111 1 22233444555666655
No 209
>PRK10534 L-threonine aldolase; Provisional
Probab=97.97 E-value=6.6e-05 Score=66.35 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=63.9
Q ss_pred ccccCCEEEEecCCC--CC-C-CcC--cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh-
Q 027424 2 AHAHGALLLVDNSIM--SP-V-LSR--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP- 74 (223)
Q Consensus 2 a~~~g~~lvVDnT~~--s~-~-~~~--pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp- 74 (223)
|+++|++|+||+++. .. . ... .+..+.|.++.|+||.++. .+||+++ .++++.+.++.++...+..++.
T Consensus 156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~---~~G~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 231 (333)
T PRK10534 156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGT---PVGSLLV-GNRDYIKRARRWRKMTGGGMRQA 231 (333)
T ss_pred HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCC---cccceEE-cCHHHHHHHHHHHHHhCCchhhH
Confidence 677899999999843 10 0 011 1122468777899997663 4676665 4667777777666554433322
Q ss_pred -HhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 75 -FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 75 -~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
..+......++....++++..++...+.++|++..
T Consensus 232 ~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~g 267 (333)
T PRK10534 232 GILAAAGLYALKHNVARLQEDHDNAAWLAEQLREAG 267 (333)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 12222333444434667777778889999999873
No 210
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=97.96 E-value=7.9e-05 Score=66.79 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=61.9
Q ss_pred CCEEEEecCCCCCCCc-Cc---cc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 6 GALLLVDNSIMSPVLS-RP---LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~-~p---l~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+++||||+++...... .. +. ..-=||+.|+||.++-.|..+|.++ + ++++.+.+........ ++.......
T Consensus 177 ~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i-~-~~~~i~~l~~~~~~~~--v~~~~~~~a 252 (351)
T PRK01688 177 KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTL-A-NEEVINLLLKVIAPYP--LSTPVADIA 252 (351)
T ss_pred CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHh-C-CHHHHHHHHhccCCCC--CCHHHHHHH
Confidence 6889999998432211 11 11 1123899999999975666776544 4 4556666654432222 232222222
Q ss_pred HhcH-----HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 81 LRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 81 ~~~l-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
...| +.+..+.++..++...+.+.|++.+.+.. .+|
T Consensus 253 ~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~p 293 (351)
T PRK01688 253 AQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQ-VFD 293 (351)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe-ECC
Confidence 2233 34455567777788889999998876543 345
No 211
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=97.96 E-value=0.00018 Score=64.93 Aligned_cols=171 Identities=17% Similarity=0.193 Sum_probs=94.0
Q ss_pred cCCEEEEecCCCCCCC---cCcccC--CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 5 HGALLLVDNSIMSPVL---SRPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~---~~pl~~--GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
++++||+|+++..... +.++.- .--|++.|++|.++-.|..+|.++ + ++++.+.+....... .+++...+.
T Consensus 186 ~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v-~-~~~~~~~l~~~~~~~--~~s~~~q~~ 261 (369)
T PRK08153 186 ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAI-G-APGTIKAFDKVRNHF--GMNRIAQAA 261 (369)
T ss_pred CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeee-c-CHHHHHHHHHhhcCC--CCCHHHHHH
Confidence 4899999999753221 112211 112889999999986777776644 4 456666666554433 356666666
Q ss_pred HHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHhh
Q 027424 80 CLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVET 155 (223)
Q Consensus 80 l~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~~ 155 (223)
+...++. +....++..++...+.+.|+.++ +. .+| ..|..+.+.+. +.+.+.+|.+.
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~--~~p----------------~~~~f~~~~~~~~~~~a~~l~~~ 322 (369)
T PRK08153 262 ALAALKDQAYLAEVVGKIAAARDRIAAIARANG-LT--PLP----------------SATNFVAIDCGRDGAFARAVLDG 322 (369)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-Cc--cCC----------------CcCcEEEEECCCCcccHHHHHHH
Confidence 5555542 22223444556666777787653 21 123 13444555553 23345566654
Q ss_pred cCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhcC
Q 027424 156 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRTG 221 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE-d~~dL~~dl~~Al~~~ 221 (223)
+.- .++.+. .|... -.++.+|+|++-+ +.+-+++-|++.++.+
T Consensus 323 l~~--~Gi~v~-------~p~~~--------------~~~~~iRis~~~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 323 LIA--RDIFVR-------MPGVA--------------PLDRCIRVSCGPDEELDLFAEALPEALEAA 366 (369)
T ss_pred HHH--CCeEEe-------eCCCC--------------CCCCeEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 321 111110 11110 0246899999954 4677777777777643
No 212
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=97.94 E-value=0.00012 Score=65.49 Aligned_cols=110 Identities=20% Similarity=0.238 Sum_probs=79.0
Q ss_pred CccccCCEEEEecC-C-----CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNS-I-----MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT-~-----~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+||++|++|=+|-+ + +......-...|+|+|.-.+||-++.. +|+|+..+.++.++.++++...|..++.
T Consensus 158 ~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~----~gAiv~gn~~~~~~a~~~rK~~Ggl~~k 233 (342)
T COG2008 158 VCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAP----VGAIVFGNRDFAKRARRWRKRAGGLMRK 233 (342)
T ss_pred HHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcce----eeeEEEcCHHHHHHHHHHHHHhcccHhh
Confidence 48999999999987 1 111112223469999999999998865 6777777888999999998888877666
Q ss_pred HhHHHHH----hcHHHHHHHHHHHHhH--HHHHHHHHhcCCCeeEEEcC
Q 027424 75 FDCWICL----RGVKTMALRVEKQQDN--AQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 75 ~da~ll~----~~l~tl~~R~~~~~~n--a~~la~~L~~~p~v~~V~yP 117 (223)
+.++. ..|++-..|....-+| |..||+.|++.|++ ++..|
T Consensus 234 --~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~-~~~~~ 279 (342)
T COG2008 234 --ARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGV-KLAFP 279 (342)
T ss_pred --hhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCc-eeccC
Confidence 33333 2333334555555666 99999999988887 56665
No 213
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=97.93 E-value=0.00016 Score=65.20 Aligned_cols=121 Identities=18% Similarity=0.236 Sum_probs=72.3
Q ss_pred CccccCCEEEEecCCCCCCCcC--cc---cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--PL---ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--pl---~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+.+. ++... ++ ..| .|++ +++|.+++ +-. .|+++.+ +++.+.+...........+
T Consensus 196 l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~-ig~v~~~-~~~~~~~~~~~~~~t~~~~ 269 (377)
T PRK02936 196 LCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIV--TVAKGLGN-GIP-VGAMIGK-KELGTAFGPGSHGSTFGGN 269 (377)
T ss_pred HHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEE--EEcccccC-CCc-cEEEEEc-HHHHhhccCCCCCCCCCCC
Confidence 4789999999999973 33211 11 123 4655 69999984 434 4556554 4565544321111112357
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
|..+......|+.+. ..+++..++...+.+.|++ +|.+..| ++.|.++.+++..
T Consensus 270 ~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v------------------~~~g~~~~i~~~~ 329 (377)
T PRK02936 270 PLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI------------------RGKGLMIGIECTE 329 (377)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE------------------eecceEEEEEecc
Confidence 777777888887763 3456666777777777765 3333222 2356788888853
No 214
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=97.92 E-value=0.00019 Score=64.20 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=58.4
Q ss_pred cCCEEEEecCCCCCCCc----Cccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 5 HGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~----~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+|+++|+|+++...... .++. .+-.|++.|+||.++.+|..+|.++ . ++++.+.+....... ..++..
T Consensus 182 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v-~-~~~~~~~~~~~~~~~--~~~~~~ 257 (359)
T PRK03158 182 SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGI-A-SEELIEKLNIARPPF--NTTRIA 257 (359)
T ss_pred CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhc-C-CHHHHHHHHHhcCCC--CCCHHH
Confidence 58999999997432211 1111 2345889999999987777776544 4 456666665544322 345544
Q ss_pred HHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcC
Q 027424 77 CWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 77 a~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~ 108 (223)
.+.+...++. +....++..++...+.+.|+++
T Consensus 258 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 292 (359)
T PRK03158 258 QYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY 292 (359)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4555555542 2222233345555667777776
No 215
>PRK07505 hypothetical protein; Provisional
Probab=97.91 E-value=0.00044 Score=63.07 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=46.4
Q ss_pred CccccCCEEEEecCCCC--------CCCcCccc--C-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--h
Q 027424 1 MAHAHGALLLVDNSIMS--------PVLSRPLE--L-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--A 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s--------~~~~~pl~--~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~ 67 (223)
+|+++|+++|+|++++- ++....+. . -..|++.|++|.+++. ||.++.+++++.+.+..... .
T Consensus 204 l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~t 279 (402)
T PRK07505 204 LQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS----GGVIMLGDAEQIELILRYAGPLA 279 (402)
T ss_pred HHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc----CeEEEeCCHHHHHHHHHhCCCce
Confidence 47899999999999631 11111111 1 1247778999999865 46665556566665543322 1
Q ss_pred cCCCCChHhHHHHHhcHH
Q 027424 68 EGSGLAPFDCWICLRGVK 85 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~ 85 (223)
++...++..+..+...++
T Consensus 280 ~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 280 FSQSLNVAALGAILASAE 297 (402)
T ss_pred eCCCCCHHHHHHHHHHHH
Confidence 223345555555555554
No 216
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=97.90 E-value=0.0004 Score=64.49 Aligned_cols=184 Identities=16% Similarity=0.099 Sum_probs=102.8
Q ss_pred Ccccc------CCEEEEecCCCCCC---CcC--cc---cCCCcEEEecccccccCCcccceeEEEecChh-HHHHHHHHH
Q 027424 1 MAHAH------GALLLVDNSIMSPV---LSR--PL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQ 65 (223)
Q Consensus 1 ia~~~------g~~lvVDnT~~s~~---~~~--pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~~~~l~~~~ 65 (223)
+|+++ |+++.||.+++.++ ... +. ..|||-+.-|.||++.|+- -.|++..++++ +...+....
T Consensus 211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~--g~G~l~~r~~~~l~~~~~~~~ 288 (431)
T TIGR01788 211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYP--GVGWVIWRDEEALPEELIFHV 288 (431)
T ss_pred HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCC--CcEEEEEeChHHcchhheecc
Confidence 35667 89999999998321 111 11 2489999999999985553 24666666543 222221111
Q ss_pred HhcCCC-------CC-h----HhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 66 NAEGSG-------LA-P----FDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 66 ~~~g~~-------~s-p----~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
.+.|.. .| + .-.|+.++.+ +-+...+++..+.+..+++.|++.|.++ +.-|. |
T Consensus 289 ~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~e-l~~~~----~-------- 355 (431)
T TIGR01788 289 NYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFE-IISDG----S-------- 355 (431)
T ss_pred cccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEE-EeeCC----C--------
Confidence 111110 01 1 1245554443 3466778999999999999999999874 44331 1
Q ss_pred hCCCCeeEEEEeCCH----HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----
Q 027424 132 AKGAGSVLSFLTGSL----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---- 203 (223)
Q Consensus 132 ~~g~ggl~sf~~~~~----~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG---- 203 (223)
..++++|.+.+. .....+.+.|+- .+.- .+...++..+ . ..-.+|++|=
T Consensus 356 ---~~~iV~Fr~~~~~~~~~~~~~l~~~L~~--~G~~---------~~~~~~p~~~-------~--~~~~lR~~~~~~~~ 412 (431)
T TIGR01788 356 ---GIPLVAFKLKDDADPGYTLYDLSHRLRE--RGWI---------VPAYTLPKNA-------E--DIVVMRIVVREGFS 412 (431)
T ss_pred ---CceEEEEEeCCCCCCCcCHHHHHHHHHH--CCCc---------ccCCCCCCcc-------C--CeEEEEEEecCCCC
Confidence 358999988431 112223333211 0100 0111111111 0 2246899882
Q ss_pred CCCHHHHHHHHHHHHhcCC
Q 027424 204 IEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 204 lEd~~dL~~dl~~Al~~~~ 222 (223)
-|..+++++||..++...+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~ 431 (431)
T TIGR01788 413 RDLAELLIEDIEAALAYLE 431 (431)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 2468999999999987654
No 217
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=97.90 E-value=0.00018 Score=64.38 Aligned_cols=102 Identities=15% Similarity=0.075 Sum_probs=59.3
Q ss_pred CCEEEEecCCCCCCCcCc-ccCCC----cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 6 GALLLVDNSIMSPVLSRP-LELGA----DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~~p-l~~GA----Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+++||+|+++........ ..+-+ =|++.|+||+++-.|..+|. ++.+ +++.+.+....... .++.......
T Consensus 178 ~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~-~i~~-~~~~~~l~~~~~~~--~~~~~~~~~a 253 (354)
T PRK04635 178 DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGF-TLAN-EELIEILMRVIAPY--PVPLPVSEIA 253 (354)
T ss_pred CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhh-hhCC-HHHHHHHHhhcCCC--CCCHHHHHHH
Confidence 599999999753221111 11111 17899999999766777765 4444 55666655432222 2333222222
Q ss_pred Hhc-----HHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 81 LRG-----VKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 81 ~~~-----l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
... .+.+..+.++..++...+.+.|++++.+
T Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (354)
T PRK04635 254 TQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGA 289 (354)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 233 3444555667777788899999988754
No 218
>PLN02397 aspartate transaminase
Probab=97.90 E-value=0.00048 Score=63.51 Aligned_cols=170 Identities=12% Similarity=0.086 Sum_probs=93.8
Q ss_pred CccccCCEEEEecCCCCCCCc------Cc---ccCCCc--EEEecccccccCCcccceeEEE-ecChhHHHH----HHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RP---LELGAD--IVMHSATKFIAGHSDVMAGVLA-VKGERLAKE----LYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~p---l~~GAD--ivv~S~tK~l~G~~d~~~G~v~-~~~~~~~~~----l~~~ 64 (223)
+|+++|++||+|+++..-..- .+ +...-+ |++.|+||.++-.|..+|++++ ..++++.++ +...
T Consensus 222 ~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~ 301 (423)
T PLN02397 222 LIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLI 301 (423)
T ss_pred HHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHH
Confidence 367899999999997433221 11 111113 7899999999977888888753 334444333 2222
Q ss_pred HHhcCCCCChHhHHHHHhcHHH------H----HHHHHHHHhHHHHHHHHHhcCCCee--EEEcCCCCCCcchHHHHhhh
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT------M----ALRVEKQQDNAQKIAEFLASHPRVK--KVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t------l----~~R~~~~~~na~~la~~L~~~p~v~--~V~yP~l~~~~~~~~~~~~~ 132 (223)
......+.+....+.+...|+. . ..-.++..++...+.+.|+++.... .+..|
T Consensus 302 ~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p--------------- 366 (423)
T PLN02397 302 ARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITK--------------- 366 (423)
T ss_pred HhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccC---------------
Confidence 2222222333444444433332 1 1112455666677888888763100 11112
Q ss_pred CCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec-C--CCHHH
Q 027424 133 KGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-I--EDVND 209 (223)
Q Consensus 133 ~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-l--Ed~~d 209 (223)
.||++.+.--+.+.++++++.-++.-. ..+ |+++- + |+.+.
T Consensus 367 --~gg~fl~~~l~~~~~~~Ll~~~~V~v~--------------------------------~~~--Ri~~~~~~~~~i~~ 410 (423)
T PLN02397 367 --QIGMFSFTGLNKEQVDRMTKEYHIYMT--------------------------------RDG--RISMAGLSSKNVPY 410 (423)
T ss_pred --CceEEEecCCCHHHHHHHHHhCCEEEC--------------------------------CCC--eEEEeeCCHHHHHH
Confidence 578777753234456665555444310 122 77773 4 46789
Q ss_pred HHHHHHHHHhcC
Q 027424 210 LISDLDKALRTG 221 (223)
Q Consensus 210 L~~dl~~Al~~~ 221 (223)
+.+.+.++++.+
T Consensus 411 ~~~~i~~~~~~~ 422 (423)
T PLN02397 411 LADAIHAVVTNA 422 (423)
T ss_pred HHHHHHHHHhcc
Confidence 999999888643
No 219
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=97.86 E-value=0.00021 Score=64.74 Aligned_cols=171 Identities=16% Similarity=0.223 Sum_probs=89.3
Q ss_pred CccccCCEEEEecCCCCCCCcC----ccc-CC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PLE-LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl~-~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++. ++... +.+ .| .|+++ ++|.++|..-.+| +++.+ +++.+.+...........+
T Consensus 207 l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~--~sK~l~~g~~~ig-~v~~~-~~~~~~~~~~~~~~t~~~~ 281 (400)
T PTZ00125 207 LCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVL--LGKALSGGLYPIS-AVLAN-DDVMLVIKPGEHGSTYGGN 281 (400)
T ss_pred HHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEE--EcccccCCCcCcE-EEEEc-HHHHhhccCCCCCCCCCcC
Confidence 4789999999999973 22110 111 23 48776 5699986322444 45454 4555554321111111246
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC--
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-- 145 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-- 145 (223)
|..+......|+.+.. ..++..+....+.+.|++ ++.+..+ .+.|.++.+++..
T Consensus 282 ~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~v~~~~~~ 343 (400)
T PTZ00125 282 PLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEI------------------RGKGLLNAIVFDHSD 343 (400)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------ecccEEEEEEEccCc
Confidence 7666666666666531 122233333334444433 3433222 2367888888742
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhcC
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 221 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~~ 221 (223)
...+.+|.+.+. ..++.+ .|. .++.|||+.- -|+.+++++-|+++|++.
T Consensus 344 ~~~~~~~~~~l~--~~Gv~v--------~~~-----------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 344 GVNAWDLCLKLK--ENGLLA--------KPT-----------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred chHHHHHHHHHH--HCCeEE--------eec-----------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 234455554442 112111 110 2467999953 356777888888877653
No 220
>PRK08354 putative aminotransferase; Provisional
Probab=97.83 E-value=0.00059 Score=60.05 Aligned_cols=51 Identities=20% Similarity=0.089 Sum_probs=35.1
Q ss_pred CccccCCEEEEecCCCCCCCc-CcccCCCcEEEecccccccCCcccceeEEE
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLA 51 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~pl~~GADivv~S~tK~l~G~~d~~~G~v~ 51 (223)
+|+++|+++|+|+++.....- .+....--|++.|+||.++-.|..+|.++.
T Consensus 145 ~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 145 AVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred HhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeee
Confidence 367899999999998543211 112222348899999999877878876553
No 221
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=97.80 E-value=0.00071 Score=61.06 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=54.1
Q ss_pred CccccCCEEEEecCCCCCCC-cCc----ccCCC---cEEEecccccccCCcccceeEEEecChhHHHHHHHHH--HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRP----LELGA---DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~p----l~~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~g~ 70 (223)
+||++|++++||++++.+.. .+. .++|. ++++.|++|.+++.+ +| ++.. ++....+.... .....
T Consensus 168 l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~-vl~~-~~~~~~~~~~~~~~~~s~ 242 (370)
T PRK05937 168 LSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AA-LLSS-SEVKQDLMLNSPPLRYST 242 (370)
T ss_pred HHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eE-EEcC-HHHHHHHHHhCCCCeecC
Confidence 47889999999999976532 221 12343 378899999998654 33 4444 34433333211 12233
Q ss_pred CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh
Q 027424 71 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~ 106 (223)
..+|....-+..+++.+..-.++..+..+.+.++|.
T Consensus 243 ~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~ 278 (370)
T PRK05937 243 GLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFA 278 (370)
T ss_pred CCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 456654444555665553222222333444445544
No 222
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=97.80 E-value=0.0011 Score=59.35 Aligned_cols=102 Identities=19% Similarity=0.163 Sum_probs=61.7
Q ss_pred cccCCEEEEecCCCCCCCcCccc-C-CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHH
Q 027424 3 HAHGALLLVDNSIMSPVLSRPLE-L-GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 78 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~~~pl~-~-GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ 78 (223)
.+++..+|+|+++.-.....++. + ..+ |++.|+||.++-.|..+|.++ . ++++.+.+........ ++.....
T Consensus 160 ~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v-~-~~~li~~l~~~~~~~~--vs~~~q~ 235 (339)
T PRK06959 160 AARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVL-A-APALLAALRDALGAWT--VSGPARH 235 (339)
T ss_pred HHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEe-c-CHHHHHHHHHhcCCCC--CcHHHHH
Confidence 46789999999986432212221 1 123 889999999987788887655 4 4567777765543322 3443333
Q ss_pred HHHhcHHH--HHHH-HHHHHhHHHHHHHHHhcC
Q 027424 79 ICLRGVKT--MALR-VEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 79 ll~~~l~t--l~~R-~~~~~~na~~la~~L~~~ 108 (223)
.+...|+. +..+ .++..++...+.+.|+++
T Consensus 236 a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 236 AVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34444432 2223 355566777888889876
No 223
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.79 E-value=0.00015 Score=67.23 Aligned_cols=169 Identities=16% Similarity=0.200 Sum_probs=93.2
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH---HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~---~~~g~ 70 (223)
+|+++|+++|+|+.+ +++. +.-...-.||++ +.|.++| +-.-.+.++.+ +++.+.+.... ...+.
T Consensus 236 lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~~p~~a~~~~-~~i~~~~~~~~~~~~~~~~ 310 (429)
T PRK06173 236 LCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTG-GYLTLSATITT-EAIAQTICSGEAKCFMHGP 310 (429)
T ss_pred HHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhC-CccccceEEec-HHHHHHHhcCCCCccccCC
Confidence 488999999999997 5442 111122358887 8999975 43333445444 45554432100 01221
Q ss_pred --CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 71 --GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
..+|..+...+..|+.+... .++..++...+.+.|+. +|.|..| +|.|.|+++++
T Consensus 311 T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~v------------------Rg~Gl~~~iel 372 (429)
T PRK06173 311 TFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEV------------------RVLGAIGVVEM 372 (429)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeee------------------eccceEEEEEe
Confidence 24677777777777776422 35555555556555552 3333222 46789999999
Q ss_pred CCHHHHHHHHhhc---CcceeccccCCCCCCC-CCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 144 GSLALSKHVVETT---KYFSITVSFGSVKSLI-SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 144 ~~~~~~~~f~~~l---~l~~~~~s~G~~~sli-~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
++...+.++.+.+ .++ ..+ .|. ++. .+|. .|.-|+.+.+++-|+++|+
T Consensus 373 ~~~~~~~~i~~~l~e~Gi~-v~~-~g~--~l~~~Ppl------------------------~it~~ei~~~~~~l~~~l~ 424 (429)
T PRK06173 373 KEPVNMATLQPRFVEHGIW-VRP-FGK--LVYIMPPF------------------------IISPDELSQLTSGLLRVLK 424 (429)
T ss_pred CCcccHHHHHHHHHHCCeE-EEe-cCC--EEEEeCCc------------------------cCCHHHHHHHHHHHHHHHH
Confidence 6443233333332 333 111 121 221 2222 2445677888888888886
Q ss_pred c
Q 027424 220 T 220 (223)
Q Consensus 220 ~ 220 (223)
.
T Consensus 425 ~ 425 (429)
T PRK06173 425 Q 425 (429)
T ss_pred H
Confidence 4
No 224
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=97.79 E-value=0.00055 Score=61.05 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=60.1
Q ss_pred ccCCEEEEecCCCCCCC---cCcccCCC-cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 4 AHGALLLVDNSIMSPVL---SRPLELGA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~---~~pl~~GA-Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
+++++||+|+++..-.. ..+++... =|++.|+||.++-.|..+|.++ + ++++.+.+...+...+ .+....+.
T Consensus 165 ~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v-~-~~~~~~~l~~~~~~~~--~~~~~q~a 240 (335)
T PRK14808 165 KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVV-S-SEKFIDAYNRVRLPFN--VSYVSQMF 240 (335)
T ss_pred hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEE-e-CHHHHHHHHHhcCCCC--CCHHHHHH
Confidence 46899999999743111 11121111 2888999999986677776544 4 4567676655442222 34433333
Q ss_pred HHhcH---HHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 80 CLRGV---KTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 80 l~~~l---~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
+...+ +.+..+.++..++...+.+.|++..
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 273 (335)
T PRK14808 241 AKVALDHREIFEERTKFIVEERERMKSALREMG 273 (335)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33333 3344455666666677888888764
No 225
>PLN02231 alanine transaminase
Probab=97.79 E-value=0.0034 Score=59.87 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=63.1
Q ss_pred CccccCCEEEEecCCCCCCC-----cCccc-----CCC---c---EEEecccccccC-CcccceeEEEec-ChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLE-----LGA---D---IVMHSATKFIAG-HSDVMAGVLAVK-GERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~-----~GA---D---ivv~S~tK~l~G-~~d~~~G~v~~~-~~~~~~~l~ 62 (223)
+|+++|++||+|+.+.--.+ +.++. .|. | |+++|++|.+.| .|-.+|++++.+ ++++.+.+.
T Consensus 299 ~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~ 378 (534)
T PLN02231 299 FCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIY 378 (534)
T ss_pred HHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHH
Confidence 47899999999999754221 11111 122 2 778999997643 566776655433 566766665
Q ss_pred HHHHhcC-CCCChH-hHHHHHh-------cHHHHH-HH---HHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 63 FLQNAEG-SGLAPF-DCWICLR-------GVKTMA-LR---VEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 63 ~~~~~~g-~~~sp~-da~ll~~-------~l~tl~-~R---~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
....... ....+. -+..++. +.+... .+ .+...+++..+.+.|++.|.+ .+.-|
T Consensus 379 k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi-~~~~p 445 (534)
T PLN02231 379 KVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV-TCNKA 445 (534)
T ss_pred HHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eecCC
Confidence 4433211 111111 1122221 122211 11 355677888899999988765 34434
No 226
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.79 E-value=0.00021 Score=65.89 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=95.7
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH---HH-hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---QN-AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~---~~-~~g 69 (223)
+|++||+++|+|+.+ +++. +.....-.||+ ++.|.++|...-+++ ++. ++++.+.+... .. ..+
T Consensus 229 lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~gG~~p~~a-v~~-~~~i~~~~~~~~~~~~~~~~ 303 (423)
T PRK05964 229 ICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIM--CLSKGLTGGYLPLAA-TLC-TAEIFEAFYSDDRAKAFMHS 303 (423)
T ss_pred HHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCee--eeehhhhcCcccceE-EEE-cHHHHHhhhcCCcccccccC
Confidence 489999999999996 3221 12122346776 566999864344555 544 45665554311 00 122
Q ss_pred CC--CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 70 SG--LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
.+ .+|..+...+..++.+.. ..++..+....+.+.|+.... +|... ..+|.|.|++|++.+
T Consensus 304 ~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i~----------~vrg~Gl~~~i~l~~ 368 (423)
T PRK05964 304 PSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRD-----LPGVA----------DVRVLGAIGAVELDR 368 (423)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-----CCCeE----------EeecccEEEEEEecc
Confidence 22 467777777777775532 345666666666666654311 33221 124678999999943
Q ss_pred HH---HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHH
Q 027424 146 LA---LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKAL 218 (223)
Q Consensus 146 ~~---~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al 218 (223)
.. ...+|...+. ..++- ..| ..+.+|++ +--||++.+++-|+++|
T Consensus 369 ~~~~~~~~~l~~~l~--~~Gv~--------v~~------------------~~~~lR~~p~l~~t~edId~~v~~l~~al 420 (423)
T PRK05964 369 PVLERDGPALRAFAL--ERGVL--------LRP------------------LGNTIYLMPPYIITAEELDRITDAIVEVA 420 (423)
T ss_pred CcchhHHHHHHHHHH--HCCeE--------EEe------------------cCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 22 2445544431 11110 011 11358887 44567888888888887
Q ss_pred hc
Q 027424 219 RT 220 (223)
Q Consensus 219 ~~ 220 (223)
+.
T Consensus 421 ~~ 422 (423)
T PRK05964 421 DE 422 (423)
T ss_pred hh
Confidence 53
No 227
>PLN00144 acetylornithine transaminase
Probab=97.79 E-value=0.00053 Score=62.46 Aligned_cols=168 Identities=19% Similarity=0.302 Sum_probs=91.4
Q ss_pred CccccCCEEEEecCCCCCCCcC--c-----ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--P-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--p-----l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+.... +... + ...-.| +.+++|.++| +..+ |+++.+ +++.+.+...........+
T Consensus 196 l~~~~g~llI~DEv~tg-~gr~g~~~~~~~~~~~PD--i~t~sK~l~~-G~pi-g~v~~~-~~~~~~~~~~~~~~T~~~~ 269 (382)
T PLN00144 196 LCDEAGALLVFDEVQCG-LGRTGYLWAHEAYGVEPD--IMTLAKPLAG-GLPI-GAVLVT-EKVASAINPGDHGSTFAGG 269 (382)
T ss_pred HHHHcCCEEEEechhhC-CCccchHhhhhhcCCCCC--EEEecccccC-Ccce-EEEEEc-HHHHhccCCCCCCCCCCCC
Confidence 48899999999999632 2111 1 112246 7788999986 4455 445454 4565544321111122347
Q ss_pred hHhHHHHHhcHHHH-----HHHHHHHHhHHHH-HHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 74 PFDCWICLRGVKTM-----ALRVEKQQDNAQK-IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 74 p~da~ll~~~l~tl-----~~R~~~~~~na~~-la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
|..+......|+.+ ..++++..+.... +.+.++++|.+..|. |.|.++.+++..
T Consensus 270 pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vr------------------g~G~~~~l~l~~-- 329 (382)
T PLN00144 270 PLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVR------------------GVGLLVGIQLDV-- 329 (382)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeee------------------cCceEEEEEecC--
Confidence 77777777666554 2333333222222 344555666554443 578899999832
Q ss_pred HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 148 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 148 ~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
.+++|.+.+. ..+..+ .|. + ....|||+.++ |+.+..++-|+++|+.
T Consensus 330 ~~~~~~~~~~--~~Gv~i--------~~~---------------~-~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 330 PAGPLVDACR--DSGLLV--------LTA---------------G-KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred ccHHHHHHHH--HCCeEE--------eec---------------C-CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 1233443321 111111 110 1 13679999998 5667777788887764
No 228
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=97.79 E-value=0.00093 Score=59.91 Aligned_cols=105 Identities=12% Similarity=0.082 Sum_probs=60.7
Q ss_pred ccccCCEEEEecCCCCCCC----cCccc-CCC---cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 2 AHAHGALLLVDNSIMSPVL----SRPLE-LGA---DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~----~~pl~-~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
++++++ +|+|+++.-... ..++. ... =|++.|+||.++-.|..+|.++ . ++++.+++..... ...++
T Consensus 174 ~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v-~-~~~~~~~~~~~~~--~~~~s 248 (360)
T PRK07392 174 LEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAI-A-HPDRLQRWQQWRD--PWPVN 248 (360)
T ss_pred HHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeee-C-CHHHHHHHHhhCC--CCCCC
Confidence 566775 777999743211 11111 111 2888999999986777876654 4 4456565543322 23456
Q ss_pred hHhHHHHHhcHHH--HHHH-HHHHHhHHHHHHHHHhcCCCe
Q 027424 74 PFDCWICLRGVKT--MALR-VEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 74 p~da~ll~~~l~t--l~~R-~~~~~~na~~la~~L~~~p~v 111 (223)
....+.+.+.++. +... .+...++...+.+.|++.|.+
T Consensus 249 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (360)
T PRK07392 249 GLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGL 289 (360)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 6555555555543 2221 244556677788899877664
No 229
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=97.79 E-value=0.00026 Score=64.70 Aligned_cols=173 Identities=16% Similarity=0.272 Sum_probs=90.9
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+.+ +++. .....+| .|++ +++|.++| +-.+|+ ++.+ +++.+.+...........+
T Consensus 208 lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lgg-G~piga-v~~~-~~i~~~~~~~~~~~t~~~~ 281 (397)
T TIGR03246 208 LCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGG-GFPIGA-MLTT-TEIAAHLKVGTHGTTYGGN 281 (397)
T ss_pred HHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhC-CcceeE-EEEc-HHHHHhccCCCcCCCCCCC
Confidence 488999999999996 3331 1111223 4665 78999975 455555 5454 4555544321111111246
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC--HHHH
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALS 149 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~--~~~~ 149 (223)
|..+...+..|+.+. ...++..++...+.+.|++... .||-. ...+|.|.++.+++.+ .+.+
T Consensus 282 p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~----~~~~~----------~~vrg~G~~~~i~~~~~~~~~~ 347 (397)
T TIGR03246 282 PLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINA----RYNVF----------SEIRGKGLLIGAVLTEAYQGKA 347 (397)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----cCCCe----------EeeecCceEEEEEEcCchhhHH
Confidence 666666666666542 1234444555555555543211 11100 0124678899998843 2345
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al~~ 220 (223)
.+|.+.+.- .+ ++..+ ..++.+|++ +--||.+.+++-|+++++.
T Consensus 348 ~~~~~~l~~--~G--------v~~~~-----------------~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 348 KQFVNAAAE--EG--------VIALI-----------------AGPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHHHH--CC--------eEEee-----------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 566554321 11 11011 013568884 3345678888888888764
No 230
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=97.78 E-value=0.00033 Score=65.06 Aligned_cols=106 Identities=19% Similarity=0.159 Sum_probs=72.8
Q ss_pred CccccCCEEEEecCCCC-----------CCCcCcc-c------CCCcEEEecccccccCCcccceeEEEecChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS-----------PVLSRPL-E------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----------~~~~~pl-~------~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~ 62 (223)
+|+++|++||.|++... .+...++ + -++|.+..|..|...++ +||+++.+++++.++++
T Consensus 181 ia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 181 LAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEAR 257 (431)
T ss_pred HHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHH
Confidence 58899999999999432 1222222 1 26899999999988765 48899888877877776
Q ss_pred HHH-Hh----cCCCCChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcCC
Q 027424 63 FLQ-NA----EGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 63 ~~~-~~----~g~~~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~p 109 (223)
... .. ....+++.+...+..+|+.. ..++++..++...+++.|++..
T Consensus 258 ~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~G 311 (431)
T cd00617 258 QRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEAG 311 (431)
T ss_pred HhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC
Confidence 432 11 12346777766666577553 4556767777888999999874
No 231
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=97.78 E-value=0.00042 Score=62.76 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=56.5
Q ss_pred CccccCCEEEEecCCCCCCCc--C--ccc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--R--PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~--pl~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+.+.. +.. + +.+ .|.+.-+.|++|.+++ +-.+|+ ++++ +++.+.+.........+.+|.
T Consensus 204 l~~~~g~~lI~DEv~~g-~g~~g~~~~~~~~~~~pdi~t~sK~l~~-G~~ig~-~~~~-~~~~~~~~~~~~~~t~~~~~~ 279 (389)
T PRK01278 204 LCDENGLLLIFDEVQCG-MGRTGKLFAHEWAGVTPDIMAVAKGIGG-GFPLGA-CLAT-EEAAKGMTPGTHGSTYGGNPL 279 (389)
T ss_pred HHHHcCCEEEEeccccC-CCcCCcceeecccCCCCCEEEEehhccC-CcceEE-EEEc-HHHHhccCCCCCCCCCCccHH
Confidence 48999999999998742 211 1 111 2332224588999984 455655 4454 445444432211122235777
Q ss_pred hHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc
Q 027424 76 DCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 76 da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~ 107 (223)
.+......|+.+.. ..++..++...+.+.|+.
T Consensus 280 ~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~ 313 (389)
T PRK01278 280 AMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEG 313 (389)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 77777777776532 234444555555555543
No 232
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=97.76 E-value=0.00028 Score=63.32 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=59.7
Q ss_pred CccccCCEEEEecCCCCCCCcC----c---ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----P---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----p---l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++. .+... + .....|++ +++|.++ .+-.+|+ ++.+ +++.+.+...........+
T Consensus 199 l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~riG~-~~~~-~~~~~~~~~~~~~~~~~~~ 272 (379)
T TIGR00707 199 ICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDII--TLAKGLG-GGVPIGA-TLAK-EEVAEAFTPGDHGSTFGGN 272 (379)
T ss_pred HHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEE--EEccccc-CCcccEE-EEEc-HHHHhhhcCCCCCCCCCCC
Confidence 4788999999999974 23211 1 11234655 6899999 4555554 5454 4565555432111222356
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcC
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~ 108 (223)
|.....+...|+.+. .+.++..++...+.+.|++.
T Consensus 273 ~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (379)
T TIGR00707 273 PLACAAALAVLEVIEKERLLENVKEKGDYFKERLEEL 309 (379)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 666666776666543 23456666667777777643
No 233
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=97.76 E-value=0.00035 Score=63.12 Aligned_cols=100 Identities=18% Similarity=0.262 Sum_probs=56.0
Q ss_pred CccccCCEEEEecCCCCCCCc----Ccc-cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPL-ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl-~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++.. +.. .+. ..| .|++ +++|.+++ +-.+|+ ++.+ +++.+.+...........+
T Consensus 211 l~~~~~~~lI~DE~~~g-~g~~g~~~~~~~~~~~pdi~--t~sK~~~~-G~rig~-~~~~-~~~~~~~~~~~~~~t~~~~ 284 (396)
T PRK02627 211 LCDENGILLILDEVQTG-MGRTGKLFAYQHYGIEPDIM--TLAKGLGG-GVPIGA-VLAK-EKVADVFTPGDHGSTFGGN 284 (396)
T ss_pred HHHHcCCEEEEechhcC-CCccCceeeehhcCCCCCEE--EEcchhhC-CcccEE-EEEc-HHHHhccCCCCCCCCCCCC
Confidence 47899999999999752 211 111 223 3544 68999994 556665 4454 4555544321111222357
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~ 106 (223)
|..+......|+.+.. ..++..++...+.+.|+
T Consensus 285 ~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 319 (396)
T PRK02627 285 PLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLR 319 (396)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 7777777777776532 22444444444444443
No 234
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=97.75 E-value=0.001 Score=59.55 Aligned_cols=75 Identities=16% Similarity=0.141 Sum_probs=43.3
Q ss_pred CCEEEEecCCCCCCCc-CcccC--CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 6 GALLLVDNSIMSPVLS-RPLEL--GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~-~pl~~--GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
++++|+|+++..-... .++.. ..+ |++.|+||.++-.|..+|.++ + ++++.+++...... ...++......
T Consensus 186 ~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~-~-~~~~~~~~~~~~~~--~~~~~~~~~~a 261 (357)
T PRK14809 186 ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAV-V-PEEWADAYARVNTP--FAASELACRAG 261 (357)
T ss_pred CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeee-c-CHHHHHHHHHhCCC--CCCCHHHHHHH
Confidence 7899999997532111 11110 112 778999999987777776644 4 45666666544322 23455544444
Q ss_pred HhcH
Q 027424 81 LRGV 84 (223)
Q Consensus 81 ~~~l 84 (223)
...+
T Consensus 262 ~~~l 265 (357)
T PRK14809 262 LAAL 265 (357)
T ss_pred HHHh
Confidence 4444
No 235
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=97.75 E-value=0.00057 Score=62.01 Aligned_cols=101 Identities=9% Similarity=0.030 Sum_probs=57.5
Q ss_pred CEEEEecCCCCCCCc-Cc---c-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHHH
Q 027424 7 ALLLVDNSIMSPVLS-RP---L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 81 (223)
Q Consensus 7 ~~lvVDnT~~s~~~~-~p---l-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll~ 81 (223)
+++|+|+++..-... .+ + ...-.|++.|+||.++-.|..+|. ++. ++++.+.+....... .++....+.+.
T Consensus 205 ~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy-~~~-~~~~i~~l~~~~~~~--~~~~~~q~aa~ 280 (380)
T PLN03026 205 ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGY-GAF-PLSIIEYLWRAKQPY--NVSVAAEVAAC 280 (380)
T ss_pred CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCcccccee-eec-CHHHHHHHHHhcCCC--CCCHHHHHHHH
Confidence 799999997421110 11 1 122348999999999766777755 544 455666665444322 24443334444
Q ss_pred hcHHH---HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 82 RGVKT---MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 82 ~~l~t---l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
+.|+. +....++..++...+.+.|++.+.+
T Consensus 281 ~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 313 (380)
T PLN03026 281 AALSNPKYLEDVKNALVEERERLFGLLKEVPFL 313 (380)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 44532 2222344455666777888887653
No 236
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=97.74 E-value=0.00071 Score=62.37 Aligned_cols=174 Identities=16% Similarity=0.275 Sum_probs=94.0
Q ss_pred CccccCCEEEEecCCCCCCCcC----cc-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+.+.. +... ++ ..|.+.-+.|++|.+++ +-.+|+ ++. ++++.+.+...........+|.
T Consensus 228 l~~~~~~~lI~Dev~~g-~g~~g~~~~~~~~~~~pdi~s~sK~l~~-G~rig~-v~~-~~~~~~~~~~~~~~~t~~~~~~ 303 (425)
T PRK08088 228 LCDEHGIMLIADEVQTG-AGRTGTLFAMEQMGVAADLTTFAKSIAG-GFPLAG-VTG-RAEVMDAIAPGGLGGTYAGNPI 303 (425)
T ss_pred HHHHcCCEEEEeccccC-CCcCcchhHHhhcCCCCCEEEEeccccC-CCccee-eEe-cHHHHhhcCCCCCCCCCCcCHH
Confidence 47899999999999653 2111 11 23555557899999985 556655 544 4456555432222222235777
Q ss_pred hHHHHHhcHHHHH-----HHHHHHHhHHHH-HHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-C---
Q 027424 76 DCWICLRGVKTMA-----LRVEKQQDNAQK-IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-S--- 145 (223)
Q Consensus 76 da~ll~~~l~tl~-----~R~~~~~~na~~-la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~--- 145 (223)
.+..+...|+... .++++..+.... +.+.++.+|.+..|. |.|.++.+++. +
T Consensus 304 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~------------------g~G~~~~l~l~~~~~~ 365 (425)
T PRK08088 304 ACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVR------------------GLGAMIAIELFEDGDH 365 (425)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe------------------ccceEEEEEEecCCCC
Confidence 7777777777642 223222222222 222333456544443 45888999872 1
Q ss_pred ----HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHH
Q 027424 146 ----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 217 (223)
Q Consensus 146 ----~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~A 217 (223)
...+.+|...+.- .++.+ .|. +..++.|||+..+ |+.+..++-|+++
T Consensus 366 ~~p~~~~~~~l~~~~~~--~Gv~~--------~~~---------------~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~ 420 (425)
T PRK08088 366 SKPNAKLTAQIVARARD--KGLIL--------LSC---------------GPYYNVLRILVPLTIEDAQIRQGLEIIAQC 420 (425)
T ss_pred CCCCHHHHHHHHHHHHh--CCCEE--------ecC---------------CCCCCEEEEECCCCcCHHHHHHHHHHHHHH
Confidence 2334555544321 11111 010 0013569999984 3456667777777
Q ss_pred HhcC
Q 027424 218 LRTG 221 (223)
Q Consensus 218 l~~~ 221 (223)
++++
T Consensus 421 l~~~ 424 (425)
T PRK08088 421 FDEA 424 (425)
T ss_pred HHhh
Confidence 7654
No 237
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=97.74 E-value=0.00057 Score=63.60 Aligned_cols=82 Identities=16% Similarity=0.288 Sum_probs=46.7
Q ss_pred CccccCCEEEEecCCCCCCCc-C--ccc-CC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-R--PLE-LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~--pl~-~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|+....-... . +++ ++ .||+ |++|.+++ +-.+|+++ .+ +++.+.+...........+|
T Consensus 248 l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G~pig~v~-~~-~~i~~~~~~~~~~~T~~g~~ 322 (451)
T PRK06918 248 ICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-GVPISGVI-GR-KEIMDESAPGELGGTYAGSP 322 (451)
T ss_pred HHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-CCccEEEE-Ec-HHHHhccCCCCcCcCCCcCH
Confidence 478999999999996321111 1 112 34 6755 89999985 56666644 44 45555442211111123467
Q ss_pred HhHHHHHhcHHHH
Q 027424 75 FDCWICLRGVKTM 87 (223)
Q Consensus 75 ~da~ll~~~l~tl 87 (223)
..+......++.+
T Consensus 323 l~~aaa~a~l~~i 335 (451)
T PRK06918 323 LGCAAALAVLDII 335 (451)
T ss_pred HHHHHHHHHHHHH
Confidence 7776655566544
No 238
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=97.73 E-value=0.00087 Score=60.38 Aligned_cols=102 Identities=17% Similarity=0.085 Sum_probs=58.5
Q ss_pred cCCEEEEecCCCCCCC----cCccc----CC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 5 HGALLLVDNSIMSPVL----SRPLE----LG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~----~~pl~----~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
.++++|+|+++.--.. ..++. .+ --|++.|+||.++-.|..+|.++ ..++++.+.+.......+ .+..
T Consensus 190 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i-~~~~~l~~~~~~~~~~~~--~~~~ 266 (371)
T PRK05166 190 PETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL-VSDPELVGLLDRVRTPFN--VNGA 266 (371)
T ss_pred CCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeee-cCCHHHHHHHHHhccCCC--CCHH
Confidence 4889999999742211 11111 11 13889999999986677776544 456667666654433222 3443
Q ss_pred hHHHHHhcH---HHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 76 DCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 76 da~ll~~~l---~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
....+...+ +.+....+...++-..+.+.|+++.
T Consensus 267 ~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 303 (371)
T PRK05166 267 AQAAALAALDDEEHLAKGVALALAERERLKKELAEMG 303 (371)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 322333333 2233334555566677888998873
No 239
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.72 E-value=0.00064 Score=62.63 Aligned_cols=120 Identities=14% Similarity=0.199 Sum_probs=65.6
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|++||+++|+|+.+..- +.+.....-.||++ ++|.++| +-.+|+ ++.+ +++.+.+...........+|
T Consensus 226 lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G~pig~-v~~~-~~i~~~~~~~~~~~T~~~~p 300 (420)
T TIGR00700 226 WCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLAD-GLPLSG-VTGR-AEIMDAPAPGGLGGTYAGNP 300 (420)
T ss_pred HHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccC-CcceEE-EEec-HHHHhhcCCCCcCCCCCcCH
Confidence 488999999999996321 11122223468665 9999995 566665 4444 45555442111111112467
Q ss_pred HhHHHHHhcHHHH-----HHHHHHHHhHH-HHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 75 FDCWICLRGVKTM-----ALRVEKQQDNA-QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 75 ~da~ll~~~l~tl-----~~R~~~~~~na-~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
..+...+..|+.+ ..++++..+.. ..+.+..+.+|.+..|. |.|.++.|++
T Consensus 301 l~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vr------------------g~G~~~~i~~ 357 (420)
T TIGR00700 301 LACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVR------------------GLGAMIAVEL 357 (420)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEee------------------ccceEEEEEE
Confidence 7776666666554 23333332222 22333334466554443 4688888887
No 240
>PRK06855 aminotransferase; Validated
Probab=97.72 E-value=0.0023 Score=59.17 Aligned_cols=110 Identities=13% Similarity=0.091 Sum_probs=60.2
Q ss_pred CccccCCEEEEecCCCCCCCc----Ccc-cC---CCcEEEecccccccCCcccceeEEEec---ChhHH---HHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPL-EL---GADIVMHSATKFIAGHSDVMAGVLAVK---GERLA---KELYFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl-~~---GADivv~S~tK~l~G~~d~~~G~v~~~---~~~~~---~~l~~~~~ 66 (223)
+|+++|++||.|+.+..-.+. .|+ .+ +--|++.|+||+++..|..+|.++.-+ ++.+. +++.....
T Consensus 199 ~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~ 278 (433)
T PRK06855 199 IAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM 278 (433)
T ss_pred HHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc
Confidence 378899999999997532211 121 11 123899999999987888887765422 12222 22222211
Q ss_pred hcCCCCChHhHHHHHhcHH-----HH-HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 67 AEGSGLAPFDCWICLRGVK-----TM-ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~-----tl-~~R~~~~~~na~~la~~L~~~p~v 111 (223)
. ..+.+...-+.+.+.++ .. ....+...++...+.+.|++.|.+
T Consensus 279 ~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~ 328 (433)
T PRK06855 279 I-EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGL 328 (433)
T ss_pred c-ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 1 11233333333344442 22 233345566677788889877653
No 241
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=97.72 E-value=0.0012 Score=59.36 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=62.5
Q ss_pred ccccCCEEEEecCCCCCCC---cCcccC---CCc-EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 2 AHAHGALLLVDNSIMSPVL---SRPLEL---GAD-IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~---~~pl~~---GAD-ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
++.+++++|+|++++.... ..++.+ .-+ |++.|++|.++..|..+|. +++ ++++.+.+..... ....++
T Consensus 186 ~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~-~~~-~~~~~~~l~~~~~--~~~~s~ 261 (368)
T PRK03317 186 LDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGY-LAA-APAVVDALRLVRL--PYHLSA 261 (368)
T ss_pred HHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhh-hhC-CHHHHHHHHhcCC--CCCCCH
Confidence 4556899999999853211 111111 112 7888999999866777765 444 4566666654332 224566
Q ss_pred HhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 75 FDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 75 ~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.....+...++ .+..++++..++...+.+.|+++.
T Consensus 262 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 299 (368)
T PRK03317 262 VTQAAARAALRHADELLASVAALRAERDRVVAWLRELG 299 (368)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55555555554 334445666677777888888763
No 242
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=97.72 E-value=0.0005 Score=62.13 Aligned_cols=163 Identities=15% Similarity=0.159 Sum_probs=91.4
Q ss_pred ccccCCEEEEecCCCCCCCc----Cccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 2 AHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~----~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
|++++ .+|+|+++...... .++. ..--|++.|+||+++..|..+|.++ + ++++.+.+..... ...++
T Consensus 180 ~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i-~-~~~~~~~l~~~~~--~~~~~ 254 (366)
T PRK01533 180 ISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAV-G-HEELIEKLNVVRL--PFNVS 254 (366)
T ss_pred CCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHh-C-CHHHHHHHHHhcC--CCCcC
Confidence 45555 68889997421111 1111 1234899999999998888887654 4 4567777765442 23456
Q ss_pred hHhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHH
Q 027424 74 PFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 150 (223)
Q Consensus 74 p~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~ 150 (223)
+.....+...|+. +....+...++...+.++++.+. + +| +| ..|+.+-+.+.+.+...
T Consensus 255 ~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~-~~-~~----------------~~~nf~~~~~~~~~~~~ 315 (366)
T PRK01533 255 SLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-I-PF-YQ----------------SQTNFIFLPVENGGEIY 315 (366)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-C-cc-CC----------------CcCcEEEEeCCCHHHHH
Confidence 6555555555543 22223445566667777887763 2 22 22 14555666663322222
Q ss_pred HHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 027424 151 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 219 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~ 219 (223)
+.+..-++. +. ++ ++.||||||- |+.+.|++-|++.++
T Consensus 316 ~~l~~~GI~-Vr------------~~------------------~~~iRis~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 316 EACAHAGFI-IR------------PF------------------PNGVRITVGTREQNEGVISVLQQHFE 354 (366)
T ss_pred HHHHHCCcE-Ec------------cC------------------CCceEEeCCCHHHHHHHHHHHHHHHH
Confidence 222222221 10 10 2459999995 567888888887765
No 243
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=97.71 E-value=0.003 Score=57.11 Aligned_cols=106 Identities=11% Similarity=0.147 Sum_probs=64.4
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHH----------H---H-
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----------L---Q- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~----------~---~- 65 (223)
|+|++|++++||.+-.-+ ..|++.. +|+++-|.+|.+++++- .+.+..++ +..+++.. . .
T Consensus 150 I~~~~g~~~iVDavqs~g--~~~idv~~~D~~~~s~~K~lg~~~G--l~~~~~s~-~~~~~~~~~~~~~~~~p~~~d~~~ 224 (361)
T TIGR01366 150 PEGSDDALVVIDATSGAG--GLPVDIAETDVYYFAPQKNFASDGG--LWLAIMSP-AALERIEAIAASGRWVPEFLSLPT 224 (361)
T ss_pred ccccCCCeEEEEcCcccc--CCCCCHHHCCEEEEEchhhcCCCCc--eEEEEECH-HHHhhhhcccCCCCCCchhhhHHH
Confidence 468899999999985443 3444432 79999999999999841 23333454 33333321 0 0
Q ss_pred --H-----hcCCCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 66 --N-----AEGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 66 --~-----~~g~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v 111 (223)
. .+-.+.+-...+-+.++++.+ ..+.+++.+.++.+.++|++.+.+
T Consensus 225 ~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~ 283 (361)
T TIGR01366 225 AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYA 283 (361)
T ss_pred HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 0 001122223333455666654 345688888888899999998854
No 244
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=97.71 E-value=0.0015 Score=59.50 Aligned_cols=107 Identities=15% Similarity=0.081 Sum_probs=56.9
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc---cCCC--cEEEecccccccCCcccceeEEEecChhHH--------HHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL---ELGA--DIVMHSATKFIAGHSDVMAGVLAVKGERLA--------KELYF 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl---~~GA--Divv~S~tK~l~G~~d~~~G~v~~~~~~~~--------~~l~~ 63 (223)
+|+++|++||+|+++.--.. ..++ .-.. -|++.|+||.++.+|..+|.++ +++ ++. +.+..
T Consensus 201 ~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i-~~~-~l~~~~~~~~~~~~~~ 278 (402)
T TIGR03542 201 YANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTV-VPK-ELTYADGHSVIQDWER 278 (402)
T ss_pred HHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEE-ecH-HHhhcchhhHHHHHHH
Confidence 36789999999999753211 1121 1111 2668999999988888887655 444 443 11111
Q ss_pred HHHhcCCCCChHhHHHHHhcH-----HHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 64 LQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 64 ~~~~~g~~~sp~da~ll~~~l-----~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.........++..-..+...+ +.+....+...++...+.+.|+++.
T Consensus 279 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 329 (402)
T TIGR03542 279 RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG 329 (402)
T ss_pred HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 111112223432222222222 2222223455666677888888763
No 245
>PLN02590 probable tyrosine decarboxylase
Probab=97.71 E-value=0.0011 Score=63.34 Aligned_cols=176 Identities=20% Similarity=0.263 Sum_probs=107.3
Q ss_pred CccccCCEEEEecCCCCCCCcCc--------ccCCCcEEEecccccccCCcccceeEEEecChh-HHHHHHHHHHhc---
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP--------LELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQNAE--- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p--------l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~~~~l~~~~~~~--- 68 (223)
+|+++|+++=||.+||......| ++ .||=+.-+.||++.-+ --+|++.+++.. +...+.....++
T Consensus 312 i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie-~ADSit~D~HK~l~~p--~~cg~llvr~~~~l~~a~~~~~~YL~~~ 388 (539)
T PLN02590 312 IAKKYGIWLHVDAAYAGNACICPEYRKFIDGIE-NADSFNMNAHKWLFAN--QTCSPLWVKDRYSLIDALKTNPEYLEFK 388 (539)
T ss_pred HHHHhCCeEEEecchhhhhhcChhhHHHhcCCc-cCCEEEECchhhcCcC--cCEEEEEecCHHHHHHHhhcCHHHhCCc
Confidence 57899999999999988654332 23 4899999999999743 457777777643 222221101111
Q ss_pred -------------CCCC----ChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHH
Q 027424 69 -------------GSGL----APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 129 (223)
Q Consensus 69 -------------g~~~----sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~ 129 (223)
+..+ ...-.|+.++ |.+-+..++++..+.|+.++++++++|.++-|.-|-
T Consensus 389 ~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~----------- 457 (539)
T PLN02590 389 VSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY----------- 457 (539)
T ss_pred ccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-----------
Confidence 1111 2234555555 445578889999999999999999999876555442
Q ss_pred hhhCCCCeeEEEEeC----CHH----HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE
Q 027424 130 SQAKGAGSVLSFLTG----SLA----LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 201 (223)
Q Consensus 130 ~~~~g~ggl~sf~~~----~~~----~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls 201 (223)
=++++|... +.+ ..+++.++++-- +. +..++..+ . ..-.+|++
T Consensus 458 ------l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~--G~------------~~vs~t~~-------~--g~~~lR~~ 508 (539)
T PLN02590 458 ------FSLVCFRLAPVDGDEDQCNERNRELLAAVNST--GK------------IFISHTAL-------S--GKFVLRFA 508 (539)
T ss_pred ------eEEEEEEecCCCCCHHHHHHHHHHHHHHHHhC--CC------------EEEEeeEE-------C--CEEEEEEE
Confidence 267888763 222 123444443210 00 00011100 0 23479999
Q ss_pred ec-----CCCHHHHHHHHHHHHh
Q 027424 202 VG-----IEDVNDLISDLDKALR 219 (223)
Q Consensus 202 vG-----lEd~~dL~~dl~~Al~ 219 (223)
|+ .||++++++.+.+..+
T Consensus 509 i~n~~T~~~dv~~~~~~i~~~a~ 531 (539)
T PLN02590 509 VGAPLTEEKHVTEAWQIIQKHAS 531 (539)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHH
Confidence 97 6678888888887654
No 246
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=97.70 E-value=0.00044 Score=64.69 Aligned_cols=170 Identities=14% Similarity=0.221 Sum_probs=94.3
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC-
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~- 72 (223)
+|+++|+++|+|+... ++ .+.-...-.||+ .+.|.++|.---+++++ .++ ++.+.+....-..+.+.
T Consensus 260 lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDiv--t~gK~lggG~~Pigav~-~~~-~i~~~~~~~~~~~~~T~~ 334 (459)
T PRK11522 260 LCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDIL--CLAKALGGGVMPIGATI-ATE-EVFSVLFDNPFLHTTTFG 334 (459)
T ss_pred HHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEE--EechhhhCCCccceeEE-EcH-HHHHHhccCCcccCCCCC
Confidence 4889999999999962 33 121111226877 67999986212355544 543 45443321111233444
Q ss_pred -ChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCC-CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 73 -APFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 73 -sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p-~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
+|..+...+..|+.+.. ..++..+....+.+.|+ ++| .|..| +|.|.|+.+++.
T Consensus 335 gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~V------------------rG~Gl~~giel~ 396 (459)
T PRK11522 335 GNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEA------------------RGKGMLMAIEFV 396 (459)
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeE------------------EeceeEEEEEec
Confidence 78777777778887642 22344444444444443 244 23333 467999999996
Q ss_pred CHHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHH
Q 027424 145 SLALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKA 217 (223)
Q Consensus 145 ~~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv----GlEd~~dL~~dl~~A 217 (223)
+.+.+..+.+.+ +++-. .+. .....+|++. .-||.+.+++-|+++
T Consensus 397 ~~~~~~~i~~~l~~~Gvl~~-~~~---------------------------~~~~~lr~~Ppl~~t~~~id~~l~~l~~~ 448 (459)
T PRK11522 397 DNEIGYNFASEMFRQRVLVA-GTL---------------------------NNAKTIRIEPPLTLTIEQCEQVLKAARKA 448 (459)
T ss_pred CchHHHHHHHHHHHCCeEEE-ecC---------------------------CCCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 544455554443 23311 100 0124466443 346788899999988
Q ss_pred HhcC
Q 027424 218 LRTG 221 (223)
Q Consensus 218 l~~~ 221 (223)
|+..
T Consensus 449 l~~~ 452 (459)
T PRK11522 449 LAAM 452 (459)
T ss_pred HHHH
Confidence 8743
No 247
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=97.70 E-value=0.0005 Score=62.94 Aligned_cols=173 Identities=15% Similarity=0.231 Sum_probs=93.0
Q ss_pred CccccCCEEEEecCCCCCCCcC----cc-cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PL-ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl-~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|++||+++|+|+.+ +++... +. .+| .|+ .|++|.++| +-.+|+ ++.+ +++.+.+...........+
T Consensus 212 l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~g-G~~ig~-~~~~-~~~~~~~~~~~~~~t~~~~ 285 (406)
T PRK12381 212 LCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDV--LTTAKALGG-GFPIGA-MLTT-EKCASVMTVGTHGTTYGGN 285 (406)
T ss_pred HHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCE--EEehhhhhC-CCceEE-EEEc-HHHHhhcCCCCCCCCCCCC
Confidence 488999999999997 433211 11 123 465 589999985 455554 5454 4565544321111111347
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH--HHH
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALS 149 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--~~~ 149 (223)
|..+......|+.+.. ..++..++...+.+.|++... .||-. ...+|.|.++.+++... ..+
T Consensus 286 pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~~~~l~~~~~~~~ 351 (406)
T PRK12381 286 PLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINA----RYGLF----------SEIRGLGLLIGCVLNAEYAGKA 351 (406)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCE----------EEEecCeEEEEEEecCchhhHH
Confidence 8777777777776532 234455555555555554210 01100 01246788889988432 234
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
..|.+.+.- .++.+ .+ ..++.|||+.-+ |+.+.+++-|+++|+.
T Consensus 352 ~~~~~~l~~--~Gv~v--------~~-----------------~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 352 KQISQEAAK--AGVMV--------LI-----------------AGPNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred HHHHHHHHH--CCcEE--------ee-----------------CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 455443321 11110 00 013569998765 5567777788877763
No 248
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=97.69 E-value=0.00059 Score=62.27 Aligned_cols=138 Identities=14% Similarity=0.211 Sum_probs=75.7
Q ss_pred CccccCCEEEEecCCCCCCCcC--cc---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--PL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|++||+++|+|+.+. ++... +. ..+.+.-+.|++|.+++ +-.+|+ ++.+ +++.+.+...........+|.
T Consensus 213 l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~-G~rig~-vv~~-~~i~~~l~~~~~~~t~~~~~~ 288 (403)
T PRK05093 213 LCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDILTSAKALGG-GFPIGA-MLTT-AEIASHFKVGTHGSTYGGNPL 288 (403)
T ss_pred HHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCEEEecccccC-CcceEE-EEEc-HHHHhhcCCCCCCCCCCCCHH
Confidence 4889999999999975 33211 11 12322225689999985 555555 5454 455555432111111234677
Q ss_pred hHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC--HHHHHH
Q 027424 76 DCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKH 151 (223)
Q Consensus 76 da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~--~~~~~~ 151 (223)
.++..+..|+.+. ...++..++...+.+.|++... + |+-.. ..++.|-++.+++.. .....+
T Consensus 289 ~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~--~~~~~----------~~~~~G~~~~~~l~~~~~~~~~~ 354 (403)
T PRK05093 289 ACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQ--K--YGVFS----------EIRGMGLLIGAELKPQYKGRARD 354 (403)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh--h--CCCeE----------eEeeCceEEEEEecCcchhHHHH
Confidence 7777777776653 2345556666777777765421 0 11000 013567778888732 224556
Q ss_pred HHhhc
Q 027424 152 VVETT 156 (223)
Q Consensus 152 f~~~l 156 (223)
|.+.+
T Consensus 355 ~~~~l 359 (403)
T PRK05093 355 FLNAA 359 (403)
T ss_pred HHHHH
Confidence 66544
No 249
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=97.67 E-value=0.0017 Score=60.78 Aligned_cols=105 Identities=22% Similarity=0.167 Sum_probs=66.7
Q ss_pred CccccCCEEEEecCCCC-----------CCCcCccc-------CCCcEEEecccccccCCcccceeEEEecChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS-----------PVLSRPLE-------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----------~~~~~pl~-------~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~ 62 (223)
+|+++|++||.|++... .+....+. -++|+++.|.+|.+.|. +||+++.+++++.++++
T Consensus 206 ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~ 282 (460)
T PRK13238 206 IAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECR 282 (460)
T ss_pred HHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhh
Confidence 48899999999996521 11111111 25899999999987764 48988877777777765
Q ss_pred HHHHh-cC----CCCChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcC
Q 027424 63 FLQNA-EG----SGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 63 ~~~~~-~g----~~~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~ 108 (223)
..... .| +.+++.+..-+..+|+.. ..+.+...++...|++.|++.
T Consensus 283 ~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 283 TLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred hcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 44211 12 234555455566666542 234455555778899999875
No 250
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=97.67 E-value=0.0034 Score=58.81 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=60.5
Q ss_pred ccccCCEEEEecCCCCCCC-----cCcccC-------C-----CcEEEecccccccCCcccceeEEEecChhHHHHHHHH
Q 027424 2 AHAHGALLLVDNSIMSPVL-----SRPLEL-------G-----ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 64 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~-----~~pl~~-------G-----ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~ 64 (223)
|+++|++||+|+.++--.+ ..++.. | -=+++.|+||.++-.|..+|. ++..++.+.+.+...
T Consensus 220 a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~-li~~~~~l~~~~~~~ 298 (468)
T PLN02450 220 ITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGA-IYSNDEMVVSAATKM 298 (468)
T ss_pred HHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEE-EEECCHHHHHHHHHH
Confidence 6789999999999863211 111211 1 128899999999767878765 555555555544433
Q ss_pred HHhcCCCCChHhHHHHHhcHHH-------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t-------l~~R~~~~~~na~~la~~L~~~ 108 (223)
. ..+ .++...-+.+...|+. +....++..++...+.+.|+++
T Consensus 299 ~-~~~-~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 299 S-SFG-LVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred h-hcC-CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 223 2344333333333332 2333455666667788888877
No 251
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=97.66 E-value=0.00045 Score=63.93 Aligned_cols=134 Identities=10% Similarity=0.092 Sum_probs=75.2
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--H-hcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--N-AEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~-~~g~ 70 (223)
+|+++|+++|+|+.+ +++. +.-.....||++ +.|.++| +-...++++. ++++.+.+.... . ..+.
T Consensus 237 lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~g-G~~p~~a~~~-~~~~~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKALTG-GYMTLSATVT-TDKVAQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhhhc-CcccceEEEE-cHHHHHHHhcCCCCccccCC
Confidence 489999999999996 3331 111223468887 7999975 4333455544 445655543210 0 0111
Q ss_pred --CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 71 --GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
..+|..+...+..|+.+... .++..++...+.+.|+... + ||... ..+|.|.+++|++.+.
T Consensus 312 T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~---~--~~~i~----------~vrg~G~~~~i~~~~~ 376 (427)
T TIGR00508 312 TFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR---K--NPVVK----------DVRVLGAIGVVEMYKP 376 (427)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh---c--CCCEE----------eEeccccEEEEEECCc
Confidence 23677777777777765321 3555556666666665421 1 23211 1256799999999543
Q ss_pred HHHHHHHh
Q 027424 147 ALSKHVVE 154 (223)
Q Consensus 147 ~~~~~f~~ 154 (223)
..+.++.+
T Consensus 377 ~~~~~~~~ 384 (427)
T TIGR00508 377 VNVEELQK 384 (427)
T ss_pred cCHHHHHH
Confidence 33344443
No 252
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=97.66 E-value=0.0018 Score=58.85 Aligned_cols=108 Identities=14% Similarity=0.047 Sum_probs=58.5
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcc---c-CC-CcEEEecccccccCCcccceeEEEec-ChhH----HHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPL---E-LG-ADIVMHSATKFIAGHSDVMAGVLAVK-GERL----AKELYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl---~-~G-ADivv~S~tK~l~G~~d~~~G~v~~~-~~~~----~~~l~~~~ 65 (223)
+|+++++++|.|+++..-.. ..++ . .+ -=|++.|+||.++-.|..+|.+++.. +.+. ..++....
T Consensus 200 ~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
T PRK09257 200 LLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATI 279 (396)
T ss_pred HHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHh
Confidence 47889999999999853221 0111 1 11 12788999999987788888866422 3332 22332222
Q ss_pred HhcCCCCChHhHHHHHhcHHH---------HHHHH-HHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT---------MALRV-EKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t---------l~~R~-~~~~~na~~la~~L~~~ 108 (223)
.....+.++.....+.+-+++ ...++ ++..++...+.+.|+++
T Consensus 280 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 280 RTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred hhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222344433333333321 11222 44456666677888876
No 253
>PRK03321 putative aminotransferase; Provisional
Probab=97.66 E-value=0.00073 Score=60.21 Aligned_cols=163 Identities=12% Similarity=0.107 Sum_probs=91.2
Q ss_pred cCCEEEEecCCCCCCCc----CcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 5 HGALLLVDNSIMSPVLS----RPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~----~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+|+++|+|+++...... .++.. .=-+++.|+||.++-.|..+|. +++ ++++.+.+.... ...+.++..
T Consensus 176 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~-~v~-~~~~~~~~~~~~--~~~~~s~~~ 251 (352)
T PRK03321 176 ADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGY-AVG-HPEVIAALRKVA--VPFSVNSLA 251 (352)
T ss_pred CCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhh-hcC-CHHHHHHHHHhc--CCCCCCHHH
Confidence 68999999997532211 12221 1127889999999866666655 444 456766665442 223445544
Q ss_pred HHHHHh---cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHH
Q 027424 77 CWICLR---GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 153 (223)
Q Consensus 77 a~ll~~---~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~ 153 (223)
.+.+.. ..+.+..++++..++...+.+.|+... +. + +| ..|..+.+.++. ...+|.
T Consensus 252 q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~-~-~~----------------~~g~~i~i~l~~--~~~~~~ 310 (352)
T PRK03321 252 QAAAIASLAAEDELLERVDAVVAERDRVRAALRAAG-WT-V-PP----------------SQANFVWLPLGE--RTADFA 310 (352)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-Cc-c-CC----------------CCCCEEEEeCCC--CHHHHH
Confidence 333333 345555666666666677888887753 21 1 12 135556666632 123444
Q ss_pred hhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 027424 154 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 219 (223)
Q Consensus 154 ~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~ 219 (223)
+.+.--.+.+ .|+ .+.-|||++|- ++.+.+++-|+++++
T Consensus 311 ~~l~~~gI~v----------~~~-----------------~~~~iRi~~~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 311 AAAAEAGVVV----------RPF-----------------AGEGVRVTIGAPEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHCCEEE----------Ecc-----------------CCCcEEEeeCCHHHHHHHHHHHHHHhc
Confidence 4432111111 111 01239999996 568889999988765
No 254
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=97.64 E-value=0.0016 Score=60.60 Aligned_cols=131 Identities=14% Similarity=0.191 Sum_probs=72.8
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC-
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~- 72 (223)
+|+++|+++|+|+... ++ .+.-...-.||++ +.|.++|.---+++ ++.+ +++.+.+....-..+.+.
T Consensus 253 lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Piga-vv~~-~~i~~~~~~~~~~~~~T~~ 327 (442)
T TIGR03372 253 LCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGA-TIAT-EAVFSVLFDNPFLHTTTFG 327 (442)
T ss_pred HHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceE-EEec-HHHHHhhhccCccccCCCC
Confidence 4889999999999962 22 1211222368887 89999852123555 4454 455554421111233444
Q ss_pred -ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHH----HHh----cCC-CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 73 -APFDCWICLRGVKTMALRVEKQQDNAQKIAE----FLA----SHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 73 -sp~da~ll~~~l~tl~~R~~~~~~na~~la~----~L~----~~p-~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
+|..+...+..|+.+.. +...+|+.++-+ .|+ ++| .|..| +|.|.|+.++
T Consensus 328 gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v------------------RG~Gl~~gie 387 (442)
T TIGR03372 328 GNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA------------------RGKGLLMAIE 387 (442)
T ss_pred CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEE------------------ecceEEEEEE
Confidence 67777777777776632 122333333333 333 344 34443 4689999999
Q ss_pred eCCHHHHHHHHhhc
Q 027424 143 TGSLALSKHVVETT 156 (223)
Q Consensus 143 ~~~~~~~~~f~~~l 156 (223)
+.+.+...++.+.+
T Consensus 388 l~~~~~~~~i~~~l 401 (442)
T TIGR03372 388 FRDNEIGYAFAKEL 401 (442)
T ss_pred eCChHHHHHHHHHH
Confidence 96544444554443
No 255
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=97.64 E-value=0.00037 Score=64.58 Aligned_cols=166 Identities=15% Similarity=0.187 Sum_probs=90.7
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH---HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~---~~~g~ 70 (223)
+|+++|+++|+|+.+ +++. +.-...-.||++ +.|.++| +-.-.|+++++ +++.+.+.... -..+.
T Consensus 234 lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g-G~~p~~av~~~-~~i~~~~~~~~~~~~~~~~ 308 (428)
T PRK07986 234 LCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTG-GTMTLSATLTT-REVAETISNGEAGCFMHGP 308 (428)
T ss_pred HHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhC-CcccCcchhch-HHHHHHhhcCCCCccccCC
Confidence 478999999999996 4432 111112258886 8999975 32223444444 45655443210 00121
Q ss_pred --CCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 71 --GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
.-+|..+...+..|+.+.. ..++..+....+.+.|++ +|.|.. .+|.|.++++++
T Consensus 309 T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~------------------vRg~Gl~~~ve~ 370 (428)
T PRK07986 309 TFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVAD------------------VRVLGAIGVVET 370 (428)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEe------------------EeccceEEEEEe
Confidence 2367777777777776642 234444445555555543 333333 346789999998
Q ss_pred CCHHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHH
Q 027424 144 GSLALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDK 216 (223)
Q Consensus 144 ~~~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~ 216 (223)
.+...+.++.+.+ .++-. + .| ..|||+ +.-|+.+.+++-|++
T Consensus 371 ~~~~~~~~~~~~l~~~Gl~~~-~-~g-----------------------------~~i~~~Ppl~it~~ei~~~~~~l~~ 419 (428)
T PRK07986 371 TRPVNMAALQRFFVEQGVWIR-P-FG-----------------------------KLIYLMPPYIILPEQLQRLTAAVNR 419 (428)
T ss_pred CCcccHHHHHHHHHHCCcEEE-e-cC-----------------------------CEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 5432233443332 22211 1 12 234432 455778889999999
Q ss_pred HHhc
Q 027424 217 ALRT 220 (223)
Q Consensus 217 Al~~ 220 (223)
+|+.
T Consensus 420 ~l~~ 423 (428)
T PRK07986 420 AVQD 423 (428)
T ss_pred HHhh
Confidence 8864
No 256
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=97.64 E-value=0.0051 Score=55.31 Aligned_cols=126 Identities=15% Similarity=0.179 Sum_probs=72.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHH-------HH---Hh--
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQ---NA-- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-------~~---~~-- 67 (223)
+++.+|++++||.+-+.+. .|++.- .|+++.|.+|.++-+| .|++.++++ ..+++.. .. ..
T Consensus 158 i~~~~g~~~~VDa~qs~g~--~~idv~~~~~~~ss~~K~lGP~G---~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (355)
T cd00611 158 VPDTGGVPLVADMSSNILS--RPIDVSKFGVIYAGAQKNLGPAG---VTVVIVRKD-LLGKARKITPSMLNYKTHADNNS 231 (355)
T ss_pred ecccCCCeEEEEccccccC--CCCCHHHhCEEEeecccccCCCc---eEEEEECHH-HHhhcccCCCCcccHHHHHhcCC
Confidence 4677999999999964442 344432 2578888999986333 455656654 3322211 01 11
Q ss_pred -cCCCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEE
Q 027424 68 -EGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 140 (223)
Q Consensus 68 -~g~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~s 140 (223)
.| +.+-...+.+..+++.+ +.+.++..+.++.+.++|++.|++ |+... .|. .+ .+.++|
T Consensus 232 ~~~-Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl----~~~~~-~~~----~r----s~~vvs 297 (355)
T cd00611 232 LYN-TPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF----YRGPV-DKR----AR----SRMNVP 297 (355)
T ss_pred CCC-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc----cccCC-CHH----Hc----CceEEE
Confidence 12 22223456667777754 344577778888888888888763 32211 111 01 357799
Q ss_pred EEeCCH
Q 027424 141 FLTGSL 146 (223)
Q Consensus 141 f~~~~~ 146 (223)
|.+.+.
T Consensus 298 f~~~~~ 303 (355)
T cd00611 298 FRLGKE 303 (355)
T ss_pred EEcCCh
Confidence 998653
No 257
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=97.64 E-value=0.00047 Score=63.65 Aligned_cols=175 Identities=17% Similarity=0.186 Sum_probs=89.3
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~ 72 (223)
+|++||+++|+|+.+.. .+.+.-...-.||+ +++|.+++.+.-+++ +++++ ++ ..+. ....+.+ .
T Consensus 227 lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~--t~~K~l~~~G~piga-v~~~~-~i-~~~~--~~~~~~T~~g 299 (425)
T PRK09264 227 LCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIV--TLSKSISGYGLPMAL-VLIKP-EL-DVWK--PGEHNGTFRG 299 (425)
T ss_pred HHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEE--EeccccCCCccceEE-EEEch-hh-hccC--CCccCCCCCC
Confidence 48999999999999742 11122222346876 556999976655554 44543 34 2221 1111212 2
Q ss_pred ChHhHHHHHhcHHHHH-H--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 73 APFDCWICLRGVKTMA-L--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 73 sp~da~ll~~~l~tl~-~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
+|..+...+..++.+. . -.++..++...+.+.|+.... .||... ...+|.|.++.+++.+.+..
T Consensus 300 np~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~~~~---------~~vrg~Gl~~~i~l~~~~~~ 366 (425)
T PRK09264 300 NNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAA----KYPGLG---------AEVRGRGMMQGIDFGDGELA 366 (425)
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH----hCCCce---------ecceecccEEEEEecChHHH
Confidence 4555544444553221 1 123333444444444433110 122110 01246788889999665555
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~ 220 (223)
.+|...+. ..|.-++ |. |.....||++.- -|+++.+++.|+++|+.
T Consensus 367 ~~l~~~~~--~~Gv~~~--------~~---------------~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 367 GKIAAEAF--ENGLIIE--------TS---------------GPEDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred HHHHHHHH--HCCCEEe--------cc---------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 56654432 1111111 10 011356888844 77888889999888864
No 258
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=97.63 E-value=0.0026 Score=57.70 Aligned_cols=166 Identities=16% Similarity=0.210 Sum_probs=98.7
Q ss_pred CCEEEEecCCCCCCCcCcccC--CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHHH
Q 027424 6 GALLLVDNSIMSPVLSRPLEL--GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 81 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~~pl~~--GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll~ 81 (223)
+..||||+++.-......+.+ .-+ ||+-|+||.++=.|..+|- ++. ++++.+.+...+..+. ++-.......
T Consensus 177 ~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy-~ia-~~~~i~~l~~vr~p~~--v~~~a~~aa~ 252 (356)
T COG0079 177 GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGY-AIA-NPELIAALNKVRPPFN--VSSPALAAAI 252 (356)
T ss_pred CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceee-ccC-CHHHHHHHHHhcCCCC--CCHHHHHHHH
Confidence 889999999743222121211 233 8888999999988888765 434 4567777776665443 2222233333
Q ss_pred hcH---HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhc--
Q 027424 82 RGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-- 156 (223)
Q Consensus 82 ~~l---~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l-- 156 (223)
..+ +.+..+.++..+...++.+.|++++ +..| ||+ .+.-+-+.+.+.+ +..+.+.|
T Consensus 253 aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS----------------~aNFvlv~~~~~~-~~~l~~~L~~ 313 (356)
T COG0079 253 AALRDADYLEESVERIREERERLYAALKALG-LFGV-FPS----------------QANFVLVRVPDAE-AAALAEALLK 313 (356)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCC----------------CCcEEEEECCCcc-HHHHHHHHHH
Confidence 322 4467778889999999999999998 6554 452 3455555554322 22333333
Q ss_pred -CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHh
Q 027424 157 -KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALR 219 (223)
Q Consensus 157 -~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-~~dL~~dl~~Al~ 219 (223)
+++- ..+. . .|..++.+|++||-++ -+-+++-|.+.++
T Consensus 314 ~giiv-------------R~~~-----------~-~~~~~~~lRitvgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 314 KGILV-------------RDCS-----------S-VGLLPGYLRITVGTPEENDRLLAALREVLK 353 (356)
T ss_pred CCEEE-------------EeCC-----------C-CCCCCCeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 3221 1111 0 1235678999999765 4666666666554
No 259
>PLN02624 ornithine-delta-aminotransferase
Probab=97.61 E-value=0.0014 Score=61.60 Aligned_cols=167 Identities=16% Similarity=0.257 Sum_probs=89.7
Q ss_pred CccccCCEEEEecCCCCCCCcC----c---ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--C
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----P---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--G 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----p---l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~ 71 (223)
+|++||+++|+|+++. ++... + ...-.|+++ +.|.++|..--+++ ++.+ +++...+... ..+. +
T Consensus 253 lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~--lsK~lggG~~piga-v~~~-~~i~~~~~~~--~~~~T~~ 325 (474)
T PLN02624 253 LCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVI--LGKALGGGVIPVSA-VLAD-KDVMLCIKPG--EHGSTFG 325 (474)
T ss_pred HHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEE--ecccccCCCCccee-eeec-HHHHhHhccC--CcCCCCC
Confidence 4899999999999974 23211 1 112357776 56999865445555 4444 3454433211 1222 2
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCC-eeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~-v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
.+|..+......|+.+.. ..++..+....+.+.|+ .+|. +..| +|.|.++.|+++
T Consensus 326 g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v------------------rg~G~~~~i~l~ 387 (474)
T PLN02624 326 GNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEV------------------RGRGLLNAVVLN 387 (474)
T ss_pred CCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEE------------------EeeEEEEEEEec
Confidence 467777777777776542 11222233333333333 2442 2111 357888888884
Q ss_pred C----HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHH
Q 027424 145 S----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDK 216 (223)
Q Consensus 145 ~----~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~ 216 (223)
. ...+.+|.+.+ ...++-+ .|. .++.|||+ +--|+.+++++-|++
T Consensus 388 ~~~~~~~~a~~~~~~L--~e~GV~v--------~p~-----------------~~~~lR~~p~l~~t~e~id~~l~~L~~ 440 (474)
T PLN02624 388 SPKLGPVSAYDVCLKL--KERGLLA--------KPT-----------------HDTIIRLAPPLSISEDELQECSKALSD 440 (474)
T ss_pred CCCcChHHHHHHHHHH--HhCCeEE--------ecC-----------------CCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 2 23455555543 2222111 110 24678987 345677888888888
Q ss_pred HHh
Q 027424 217 ALR 219 (223)
Q Consensus 217 Al~ 219 (223)
+|+
T Consensus 441 ~l~ 443 (474)
T PLN02624 441 VLE 443 (474)
T ss_pred HHH
Confidence 776
No 260
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.61 E-value=0.0025 Score=57.65 Aligned_cols=138 Identities=19% Similarity=0.179 Sum_probs=92.4
Q ss_pred cCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh------cCCCCChHhH
Q 027424 5 HGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------EGSGLAPFDC 77 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~------~g~~~sp~da 77 (223)
-++.++|||-+|-..- +.|.+.|||+++-|+-|-.+|.=--.||.|+++ +++.++....... .|+++. .-
T Consensus 189 p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr-~~lVe~~a~RLTaPGiG~e~G~t~~--~~ 265 (403)
T PF06838_consen 189 PDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGR-KDLVERAAYRLTAPGIGKEVGATLG--TN 265 (403)
T ss_dssp TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEES-HHHHHHHHHHHS-TTTGGGSS--TT--TH
T ss_pred CCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCcCCEEech-HHHHHHHHhhhcCCccccccccCcc--hH
Confidence 3689999999987764 669999999999999999998655668888765 5676665443322 233332 35
Q ss_pred HHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcC
Q 027424 78 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 157 (223)
Q Consensus 78 ~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~ 157 (223)
.++.+||=-.+.-+.+..+.|...|..+++... +|. |...+ + ..-=+-++++++++...+|+...+
T Consensus 266 R~~~QGlFlAP~vV~eAlKgaif~A~~fe~lG~--~v~-P~~~~-~----------R~DiIQai~l~~~e~l~~FC~~iQ 331 (403)
T PF06838_consen 266 RLMFQGLFLAPHVVGEALKGAIFAAALFEKLGF--EVS-PKPDD-P----------RSDIIQAIELGSPEKLIAFCQGIQ 331 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE-S-TTS-------------SSS-EEEE-SSHHHHHHHHHHHH
T ss_pred HHHHhHHhhchHHHHHHHHHHHHHHHHHHHcCC--cCC-CCCCC-C----------CCceEEEEECCCHHHHHHHHHHHH
Confidence 567778777777778889999999999998764 444 32111 1 133466788899999999998876
Q ss_pred cc
Q 027424 158 YF 159 (223)
Q Consensus 158 l~ 159 (223)
-.
T Consensus 332 ~~ 333 (403)
T PF06838_consen 332 AA 333 (403)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 261
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=97.60 E-value=0.0041 Score=58.73 Aligned_cols=105 Identities=9% Similarity=0.003 Sum_probs=57.7
Q ss_pred CccccCCEEEEecCCCCCCCc----Ccc-cC---------CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPL-EL---------GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl-~~---------GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~ 64 (223)
+|+++++.||+|+.++.-.+. .++ ++ ..| +|+.|++|.++-.|..+|. ++..++.+.+.++..
T Consensus 227 ~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~-li~~~~~l~~~~~~~ 305 (496)
T PLN02376 227 FVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGI-VYSFNDSVVSCARKM 305 (496)
T ss_pred HHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEE-EEECCHHHHHHHHHH
Confidence 367899999999998643211 111 11 113 4579999999877888865 445555565544333
Q ss_pred HHhcCCCCChHhHHHHHhcHHH--H-HH---H-HHHHHhHHHHHHHHHhcC
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT--M-AL---R-VEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t--l-~~---R-~~~~~~na~~la~~L~~~ 108 (223)
. ..+ .+|....+++..-|+. + .. + .++..++-..+.+.|+++
T Consensus 306 ~-~~~-~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 306 S-SFG-LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred h-hcC-CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 2 233 2455444444443332 2 11 1 133344445566777764
No 262
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=97.60 E-value=0.0042 Score=55.98 Aligned_cols=127 Identities=16% Similarity=0.159 Sum_probs=73.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHH--------HH--HH-hc
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY--------FL--QN-AE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~--------~~--~~-~~ 68 (223)
+++.++++++||.+-+-+. .|++. ..|+++-|.+|.++-+| .|++..+++ ..+++. +. .. ..
T Consensus 150 l~~~~~~l~iVDavss~g~--~~id~~~~d~~~~ssqK~lgP~G---lg~l~~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (349)
T TIGR01364 150 LPDVKNAPLVADMSSNILS--RPIDVSKFGLIYAGAQKNIGPAG---LTVVIVRKD-LLGRASRITPSMLNYKIHAENDS 223 (349)
T ss_pred ecccCCCeEEEEccccccC--ccCCHHHccEEEEecccccCCCc---eEEEEECHH-HHhhcccCCCCcchHHHHHhcCC
Confidence 4678899999999954332 33332 24699999999997443 455666654 333221 11 10 11
Q ss_pred CC-CCChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 69 GS-GLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 69 g~-~~sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
.. +.+-.-.+.+..+|+. +..+.+++.+.+..+.++|++.|. +.-+.. .|.. + .+.+++|
T Consensus 224 ~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~g---l~~~~~--~~~~----r----s~~v~sf 290 (349)
T TIGR01364 224 MYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNG---FYRNPV--DPRN----R----SRMNVVF 290 (349)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC---eeccCC--CHHH----c----CCeEEEE
Confidence 01 2222344555556664 345567888888999999999876 222211 1110 1 3578999
Q ss_pred EeCCH
Q 027424 142 LTGSL 146 (223)
Q Consensus 142 ~~~~~ 146 (223)
.+.+.
T Consensus 291 ~~~~~ 295 (349)
T TIGR01364 291 TLGNE 295 (349)
T ss_pred ecCCh
Confidence 88543
No 263
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.57 E-value=0.0038 Score=63.30 Aligned_cols=114 Identities=30% Similarity=0.339 Sum_probs=70.1
Q ss_pred CccccCCEEEEecCCCCC--CCcCcccCCCcEEEecccccccCC---cccceeEEEecChhHHHHHHHHH-------Hhc
Q 027424 1 MAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSATKFIAGH---SDVMAGVLAVKGERLAKELYFLQ-------NAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~--~~~~pl~~GADivv~S~tK~l~G~---~d~~~G~v~~~~~~~~~~l~~~~-------~~~ 68 (223)
+||++|+++.||.+.+.. .+.+|.++|||+++-|+||+|+++ |.--.|.+.++. .+...+.... ...
T Consensus 665 i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~-~l~p~lpg~~v~~~~~~~~~ 743 (954)
T PRK05367 665 IVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVQIAGGETGI 743 (954)
T ss_pred HHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecc-cccccCCCCccCcCCCCCCc
Confidence 479999999999998532 245788999999999999998633 122256666653 2221111000 001
Q ss_pred CCCC-ChH---------hHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCC
Q 027424 69 GSGL-APF---------DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 118 (223)
Q Consensus 69 g~~~-sp~---------da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 118 (223)
|... +++ -.|+.+.|-+-+..+.++...||..+++.|+++. .|.|++
T Consensus 744 g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~---~~~~~~ 800 (954)
T PRK05367 744 GAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHY---PVLYTG 800 (954)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhc---CccccC
Confidence 1111 121 1233445666677777888889999999998763 455654
No 264
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=97.56 E-value=0.0088 Score=54.62 Aligned_cols=107 Identities=21% Similarity=0.167 Sum_probs=58.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-C-CC-c--EEEecccccccCCcccceeEEEecChhHHHHH----------
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-L-GA-D--IVMHSATKFIAGHSDVMAGVLAVKGERLAKEL---------- 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~-GA-D--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l---------- 61 (223)
+|+++|++||+|++++.... ..++. + +. + |++.|++|.++-.|..+|.++ +. +++.+.+
T Consensus 204 ~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i-~~-~~li~~~~~~~~~~~~~ 281 (409)
T PRK07590 204 YAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTV-VP-KELKGKTSDGEGVSLNS 281 (409)
T ss_pred HHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEE-cC-HHHhhhccccchhhhHH
Confidence 36889999999999853211 11221 1 21 2 678999999987788876644 44 4454411
Q ss_pred -H-HHHHhcCCCCChHhHHHHHhcH----HH-HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 62 -Y-FLQNAEGSGLAPFDCWICLRGV----KT-MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 62 -~-~~~~~~g~~~sp~da~ll~~~l----~t-l~~R~~~~~~na~~la~~L~~~p 109 (223)
. .........++......+...+ +. +....++..++...+.+.|+.+.
T Consensus 282 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 336 (409)
T PRK07590 282 LWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG 336 (409)
T ss_pred HHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 1111111123443222222222 22 22233555667777889998873
No 265
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=97.55 E-value=0.0012 Score=60.77 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=67.9
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~ 72 (223)
+|+++|+++|+|+.... .+.+.-...-.||++ ++|.++|.+.-+|+ ++.+++ + ..+.. ...+.+ -
T Consensus 223 lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G~piga-v~~~~~-~-~~~~~--~~~~~T~~g 295 (412)
T TIGR02407 223 LCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYGLPLAL-TLIKPE-L-DVWKP--GEHNGTFRG 295 (412)
T ss_pred HHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEE--echhccCCccceeE-EEEchh-h-hccCC--CccCCCCCc
Confidence 48999999999998631 112222334578776 56999975555555 545543 3 22211 112222 3
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHH----h----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFL----A----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L----~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
+|..+......++.+..+ .+..+++.++.++| + .+|.+. +. .+|.|.++.+++.
T Consensus 296 npl~~aaa~a~l~~~i~~-~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~----------------vrg~Gl~~~l~l~ 357 (412)
T TIGR02407 296 NNLAFVTATAALEYYWSD-DAFEKAVQRKSEIIQERLDRIVAEYPELI-KQ----------------VRGRGLMQGIECG 357 (412)
T ss_pred cHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhhCCCce-Ee----------------eecceeEEEEEec
Confidence 565555545555542111 22333333333333 2 244210 11 2467889999996
Q ss_pred CHHHHHHHHhhc
Q 027424 145 SLALSKHVVETT 156 (223)
Q Consensus 145 ~~~~~~~f~~~l 156 (223)
+.+.+.+|.+.+
T Consensus 358 ~~~~~~~~~~~~ 369 (412)
T TIGR02407 358 DGDLAGKIAKAA 369 (412)
T ss_pred ChHHHHHHHHHH
Confidence 555555665543
No 266
>PLN02724 Molybdenum cofactor sulfurase
Probab=97.54 E-value=0.011 Score=59.13 Aligned_cols=48 Identities=21% Similarity=0.142 Sum_probs=33.8
Q ss_pred CCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecCh
Q 027424 6 GALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 55 (223)
Q Consensus 6 g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~ 55 (223)
+++++||.+-+.+. ..+.-++|+|+++-|.||+++|+. =.|++.++++
T Consensus 230 ~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~--G~G~L~vr~~ 278 (805)
T PLN02724 230 RWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPT--GLGALLVRRD 278 (805)
T ss_pred ceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCC--CceEEEEehh
Confidence 46899999965543 233335699999999999998763 1456666653
No 267
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=97.53 E-value=0.0033 Score=58.51 Aligned_cols=171 Identities=18% Similarity=0.216 Sum_probs=90.9
Q ss_pred CccccCCEEEEecCCC-C-----CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-------HHh
Q 027424 1 MAHAHGALLLVDNSIM-S-----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~-s-----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-------~~~ 67 (223)
+|+++|+++|+|+... - .+.+.-...-.||+ .+.|.++|..--+++ ++.+ +++.+.+..- ...
T Consensus 244 lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~~P~ga-v~~~-~~i~~~~~~~~~~~~~~~~~ 319 (442)
T PRK13360 244 ICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGAIPMGA-VFVS-SEIHDAFMQGPEAGIEFFHG 319 (442)
T ss_pred HHHHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCccceEE-EEEc-HHHHHHhhcCCccccccccC
Confidence 4889999999999862 1 11122122235776 679999863234566 4444 4554443210 011
Q ss_pred cCCCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 68 EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.....+|..+...+..|+.+.. ..++..++...+.+-|++ +|.|..| +|.|.++.++
T Consensus 320 ~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v------------------rG~Gl~~~~~ 381 (442)
T PRK13360 320 YTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDI------------------RNLGLVGAVE 381 (442)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeee------------------eccceEEEEE
Confidence 1112477777777777776632 123334444444444432 3333332 4567777777
Q ss_pred eCC-----HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHH
Q 027424 143 TGS-----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISD 213 (223)
Q Consensus 143 ~~~-----~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~d 213 (223)
+.. .+.+.++.+.+ +..|.-+ .+ ..+.+||+ +.-|+++.+++.
T Consensus 382 l~~~~~~~~~~~~~~~~~l--~~~Gvl~--------~~------------------~~~~lr~~Ppl~~t~~eid~~~~~ 433 (442)
T PRK13360 382 LAPRDGKPGKRAYEVFLKC--FEKGLMI--------RY------------------TGDILALSPPLIIEEAQIDELFDI 433 (442)
T ss_pred EecCCCCcchhHHHHHHHH--HHCCcEE--------Ee------------------cCCEEEEeCCCccCHHHHHHHHHH
Confidence 621 12233433322 1111110 00 12457877 777889999999
Q ss_pred HHHHHhcC
Q 027424 214 LDKALRTG 221 (223)
Q Consensus 214 l~~Al~~~ 221 (223)
|+++|+.+
T Consensus 434 l~~~l~~~ 441 (442)
T PRK13360 434 LAQALKET 441 (442)
T ss_pred HHHHHHHh
Confidence 99998753
No 268
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=97.53 E-value=0.0011 Score=61.25 Aligned_cols=175 Identities=17% Similarity=0.239 Sum_probs=91.1
Q ss_pred CccccCCEEEEecCCCCCCCcC--cc---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--CCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--PL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--GLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~~s 73 (223)
+|++||+++|+|+.++ ++... .+ .+|...-+.++.|.++| +--+| +++.+ +++.+.+... ..+. ..+
T Consensus 236 lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi~t~sK~lg~-G~pig-av~~~-~~i~~~~~~~--~~~~T~~~n 309 (433)
T PRK08117 236 ICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDIMTIAKGIAS-GLPLS-AVVAS-KELMEQWPLG--SHGTTFGGN 309 (433)
T ss_pred HHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCEeehhhhccC-CCcce-eEEEc-HHHHhhccCC--CCCCCCCcC
Confidence 4889999999999985 33211 11 13443334699999985 44455 45454 4554443211 1222 247
Q ss_pred hHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC------
Q 027424 74 PFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS------ 145 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~------ 145 (223)
|..+...+..|+.+... +++..++...+.+.|+... -.||-.. ..+|.|-|+.+++..
T Consensus 310 p~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~----~~~~~~~----------~vrg~Gl~~gi~~~~~~~~~~ 375 (433)
T PRK08117 310 PVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLK----EKHPVIG----------DVRGIGLMIGIEIVDPDGEPD 375 (433)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH----hcCCcee----------eeecCCcEEEEEEecCCCCcc
Confidence 77777777777766321 2333333333333333210 0122110 135678888998821
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhc
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al~~ 220 (223)
.+....+.+.+. ..|+-+ .|. |-..+.+||+ +--|+.+++++-|+++++.
T Consensus 376 ~~~~~~~~~~l~--~~Gv~~--------~~~---------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 376 GDAVEKILDKCL--EKGLLF--------YLC---------------GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred hHHHHHHHHHHH--HCCCEE--------eec---------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 122334433321 111111 010 0123578887 4456788888888888864
No 269
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=97.52 E-value=0.0012 Score=61.03 Aligned_cols=119 Identities=13% Similarity=0.190 Sum_probs=67.1
Q ss_pred CccccCCEEEEecCCCCCCCc--C--cc-cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--R--PL-ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~--pl-~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+.+. ++.. . +. .+| .|++ +++|.++| +--+|+ ++++ +++.+.+...........+
T Consensus 227 lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G~piga-v~~~-~~i~~~~~~~~~~~T~~~~ 300 (421)
T PRK06777 227 LCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGG-GMPISA-VVGR-AEVMDAPAPGGLGGTYAGN 300 (421)
T ss_pred HHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcC-CCceEE-EEEc-HHHHhccCCCCCCCCCCcC
Confidence 4789999999999964 2211 1 11 123 6766 69999984 445554 5454 4565544321111111247
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
|..+...+..|+.+.. .+++..+....+.+.|++ +|.+..| +|.|.|+.+++
T Consensus 301 p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~G~~~~i~~ 358 (421)
T PRK06777 301 PLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDI------------------RARGSMVAVEF 358 (421)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe------------------cCceEEEEEEE
Confidence 7777777777776532 123334444444444443 4444333 46899999887
No 270
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=97.52 E-value=0.0012 Score=61.37 Aligned_cols=119 Identities=15% Similarity=0.228 Sum_probs=66.1
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+... ++. +.-...-.||++-| |.++| +--+++ ++.+ +++.+.+..........-+
T Consensus 248 lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~-G~Pi~a-v~~~-~~i~~~~~~~~~~~T~~gn 321 (443)
T PRK06058 248 WCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAG-GLPLSA-VTGR-AEIMDAPHPGGLGGTYGGN 321 (443)
T ss_pred HHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccC-CCccEE-EEEc-HHHHhhccCCCCCCCCCCC
Confidence 4899999999999963 221 11111225888774 99986 445554 5454 4554443211111111246
Q ss_pred hHhHHHHHhcHHHHHH-H-HHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 74 PFDCWICLRGVKTMAL-R-VEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 74 p~da~ll~~~l~tl~~-R-~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
|..+...+..|+.+.. . .++..+....+.+.|+ ++|.|..| +|.|.|+.+++
T Consensus 322 pl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~G~~~~i~~ 379 (443)
T PRK06058 322 PVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDV------------------RGRGAMIAIEL 379 (443)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEee------------------eccceEEEEEE
Confidence 7777777777776532 1 1233333333444443 35544444 36899999998
No 271
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=97.51 E-value=0.00065 Score=64.57 Aligned_cols=114 Identities=19% Similarity=0.180 Sum_probs=73.0
Q ss_pred CccccCCEEEEecCCCCCCCcCc-----cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-----LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------ 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-----l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~------ 67 (223)
+|+++|+++.||.+++.+....+ ++ .+||.++-|.||++.|+- -+|++..+++...+.+.....+
T Consensus 290 i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~--g~G~llvr~~~~~~~~~~~~~Yl~~~~~ 367 (522)
T TIGR03799 290 IAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPM--GAGMVLFKDPALMSAIEHHAEYILRKGS 367 (522)
T ss_pred HHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCc--ccEEEEEeCHHHHHHhccCcchhcCCCC
Confidence 47899999999999987654333 22 279999999999988763 3477777765543333221001
Q ss_pred -------cCCCCChHh---HHHHHhcHH--HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 68 -------EGSGLAPFD---CWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 68 -------~g~~~sp~d---a~ll~~~l~--tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
+..+ -|.. .|..++.+. -+...+++..+.|+.+++.|+++|.++-+.-|
T Consensus 368 ~d~~~~~legs-R~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 368 KDLGSHTLEGS-RPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred CccccceeecC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 1111 1222 333333332 24566788899999999999999987555433
No 272
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=97.50 E-value=0.0056 Score=57.05 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=60.3
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc----CC----Cc--EEEecccccccCCcccceeEEEecChhHHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE----LG----AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~----~G----AD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~ 65 (223)
+|+++++.+|+|+.++--.+- ..++ .+ .+ +++.|++|.++-.|..+|. ++..++.+.+.++...
T Consensus 228 ~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~-ivs~n~~l~~~~~~~~ 306 (447)
T PLN02607 228 FVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGT-IYSYNDKVVTTARRMS 306 (447)
T ss_pred HHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEE-EEEcCHHHHHHHHHHh
Confidence 367899999999997532211 1111 11 12 7889999999878888865 5454555655554332
Q ss_pred HhcCCCCChHhHHHHHhcHHH-------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t-------l~~R~~~~~~na~~la~~L~~~ 108 (223)
.. . .+|......+.+-|+. +...-++..++...+.++|+.+
T Consensus 307 ~~-~-~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~ 354 (447)
T PLN02607 307 SF-T-LVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA 354 (447)
T ss_pred hc-C-CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 2 2343333333333332 1222345566777788899876
No 273
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=97.45 E-value=0.0021 Score=60.06 Aligned_cols=122 Identities=18% Similarity=0.237 Sum_probs=67.5
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|+..... +.+.-...-.||++ +.|-++|.---+++ ++.++ ++...............+|
T Consensus 257 lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P~~a-v~~~~-~i~~~~~~~~~~~T~~gnp 332 (459)
T PRK06082 257 ICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVPIAA-MITKD-KYNTAAQISLGHYTHEKSP 332 (459)
T ss_pred HHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCCCcceE-EEEcH-HHHhhccCCCCCCCCCcCH
Confidence 488999999999996321 11111222369887 89999973223444 44443 4432211000011122477
Q ss_pred HhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 75 FDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 75 ~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
..+...+..|+.+.. ..++..+....+.+.|+ +||.|..| +|.|.|+.+++.
T Consensus 333 l~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~~~ve~~ 390 (459)
T PRK06082 333 LGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDV------------------RGIGLLWGVELV 390 (459)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeee------------------eeccceeEEEEc
Confidence 777777777777642 12344444444444443 24544443 468999999983
No 274
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.43 E-value=0.00075 Score=62.41 Aligned_cols=122 Identities=14% Similarity=0.180 Sum_probs=66.9
Q ss_pred CccccCCEEEEecCCCCCCCcC----ccc-CC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----HhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PLE-LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl~-~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----~~~g 69 (223)
+|+++|+++|+|+.. +++... ..+ +| .||+ .+.|.++| +-...|+++++ +++.+.+.... -..+
T Consensus 230 lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~g-G~~p~~av~~~-~~i~~~~~~~~~~~~~~h~ 304 (422)
T PRK05630 230 LCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIM--CVGKALTG-GFMSFAATLCT-DKVAQLISTPNGGGALMHG 304 (422)
T ss_pred HHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCee--eeechhhc-Cccccceeecc-HHHHHHHhccCCCCccccC
Confidence 488999999999996 443211 011 23 5777 66899975 22234555554 45555442110 0112
Q ss_pred C--CCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh---cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 S--GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 ~--~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~---~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
. ..+|..+...+..|+.+.. ..++..+....+.+.|+ ++|.|.. .+|.|.|++++
T Consensus 305 ~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~------------------vRg~Gl~~~ie 366 (422)
T PRK05630 305 PTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVAD------------------VRVLGAIGVVE 366 (422)
T ss_pred CCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeee------------------eeccccEEEEE
Confidence 1 2467777777777777642 12333444444444343 2333322 35789999999
Q ss_pred eCC
Q 027424 143 TGS 145 (223)
Q Consensus 143 ~~~ 145 (223)
+.+
T Consensus 367 ~~~ 369 (422)
T PRK05630 367 MEQ 369 (422)
T ss_pred ECC
Confidence 954
No 275
>PLN02672 methionine S-methyltransferase
Probab=97.42 E-value=0.0078 Score=61.61 Aligned_cols=108 Identities=12% Similarity=0.061 Sum_probs=61.2
Q ss_pred CccccCCEEEEecCCCCCCC-cCc-----cc-----CC------CcEEEecccccccCCcccceeEEEecChhHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRP-----LE-----LG------ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~p-----l~-----~G------ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~ 63 (223)
+|+++|++||+|+.+.--.+ ..+ +. +. .=|++.|++|.++-.|..+|.++ ++++.+.+.+..
T Consensus 857 la~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylI-ap~~eLi~~l~~ 935 (1082)
T PLN02672 857 VCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLA-LNDSVLIDAFHS 935 (1082)
T ss_pred HHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEE-eCCHHHHHHHHH
Confidence 36889999999999852111 000 11 11 12678899999998888887655 555557676655
Q ss_pred HHHhcCCCC-ChHhHHHHHhcH-------HH-HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 64 LQNAEGSGL-APFDCWICLRGV-------KT-MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 64 ~~~~~g~~~-sp~da~ll~~~l-------~t-l~~R~~~~~~na~~la~~L~~~p 109 (223)
.....+... +...+..++..+ .. +....+...++...+.++|+++.
T Consensus 936 ~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G 990 (1082)
T PLN02672 936 APGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACG 990 (1082)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 433322211 111122122111 11 22233556777888999999873
No 276
>PRK07678 aminotransferase; Validated
Probab=97.38 E-value=0.0056 Score=57.10 Aligned_cols=178 Identities=20% Similarity=0.241 Sum_probs=94.8
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----HhcCC
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----~~~g~ 70 (223)
+|+++|+++|+|+.... + +.+.-...-.||++- .|-++|..--+++ ++++ +++.+.+..-. -..+.
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~--gK~lggG~~Pi~a-v~~~-~~i~~~~~~~~~~~~~~h~~ 317 (451)
T PRK07678 242 ICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITM--AKGITSAYLPLSA-TAVK-KEIYEAFKGKGEYEHFRHVN 317 (451)
T ss_pred HHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEe--ecccccCCcceeE-EEEc-HHHHHHHhccCcccccccCC
Confidence 48999999999998521 1 112212223698854 8999974233444 5454 45555443100 01121
Q ss_pred --CCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 71 --GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.-+|..+...+..|+.+.. ..++..+....+.+.| ++||.|..|. |.|.|+.++
T Consensus 318 T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vr------------------g~Gl~~~i~ 379 (451)
T PRK07678 318 TFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIR------------------GKGLLVGIE 379 (451)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE------------------eeceEEEEE
Confidence 2467777777777777643 1233344444444433 3455554443 678999999
Q ss_pred eC-C--------HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHH
Q 027424 143 TG-S--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVND 209 (223)
Q Consensus 143 ~~-~--------~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~d 209 (223)
+. + .+.+.++.+.+. ..|.-+.. ..|... -....|||+ +--||++.
T Consensus 380 ~~~~~~~~~~~~~~~a~~i~~~l~--~~Gv~~~~-----~g~~v~--------------~~~~~lrl~Ppl~it~~eid~ 438 (451)
T PRK07678 380 LVNDKETKEPADNDKVASVVAACK--EKGLIIGK-----NGDTVA--------------GYNNVLTLSPPLVISSEEIAF 438 (451)
T ss_pred EecCCcccCcCchHHHHHHHHHHH--HCCcEEee-----cCcccc--------------CCCCEEEEECCCcCCHHHHHH
Confidence 82 1 122444443321 11111100 001000 013568885 45578999
Q ss_pred HHHHHHHHHhcC
Q 027424 210 LISDLDKALRTG 221 (223)
Q Consensus 210 L~~dl~~Al~~~ 221 (223)
+++-|+++|+++
T Consensus 439 ~~~~l~~~l~~~ 450 (451)
T PRK07678 439 IVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 277
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=97.38 E-value=0.0026 Score=58.72 Aligned_cols=50 Identities=38% Similarity=0.551 Sum_probs=34.8
Q ss_pred CccccCCEEEE--ecCCCCCCCcCcccCCCcEEEeccccc-----ccCCcccceeEEEecC
Q 027424 1 MAHAHGALLLV--DNSIMSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKG 54 (223)
Q Consensus 1 ia~~~g~~lvV--DnT~~s~~~~~pl~~GADivv~S~tK~-----l~G~~d~~~G~v~~~~ 54 (223)
+||++|++++| |.. ..+....|-++|+|+++.|..|+ ++|++ +|.+.+++
T Consensus 228 ~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg---~G~l~~~~ 284 (447)
T PRK00451 228 IAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPY---LGFFATRK 284 (447)
T ss_pred HHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCCCCCCCC---chHHHhhH
Confidence 47899999998 533 33444566788999999987775 66664 55554443
No 278
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=97.37 E-value=0.0021 Score=59.33 Aligned_cols=82 Identities=11% Similarity=0.085 Sum_probs=44.3
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|+....- +.+.-+..-.| +.++.|.++| +--+|+ ++++ +++.+.+..........-+|
T Consensus 227 lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD--i~t~gK~l~~-G~piga-v~~~-~~i~~~~~~~~~~~T~~gnp 301 (421)
T PRK09792 227 LCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD--LMTMAKSLAG-GMPLSG-VVGN-ANIMDAPAPGGLGGTYAGNP 301 (421)
T ss_pred HHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc--EEEeehhhcC-CCceEE-EEEc-HHHHhccCCCCcCCCCCCCH
Confidence 478999999999985321 11111112357 4688999986 455665 5454 45554432111111112366
Q ss_pred HhHHHHHhcHHHH
Q 027424 75 FDCWICLRGVKTM 87 (223)
Q Consensus 75 ~da~ll~~~l~tl 87 (223)
..+...+..++.+
T Consensus 302 l~~aaa~a~l~~l 314 (421)
T PRK09792 302 LAVAAAHAVLNII 314 (421)
T ss_pred HHHHHHHHHHHHH
Confidence 6665555555544
No 279
>PRK02769 histidine decarboxylase; Provisional
Probab=97.37 E-value=0.0028 Score=57.89 Aligned_cols=113 Identities=17% Similarity=0.243 Sum_probs=68.3
Q ss_pred CccccC---CEEEEecCCCCCCCc---C--ccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-----
Q 027424 1 MAHAHG---ALLLVDNSIMSPVLS---R--PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----- 65 (223)
Q Consensus 1 ia~~~g---~~lvVDnT~~s~~~~---~--pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----- 65 (223)
+|+++| +++.||.+++.+... . ++. .|+|.++-|.||+++++- -.|++..+++.+ ..+....
T Consensus 185 i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~--g~G~l~~r~~~~-~~~~~~~~yl~~ 261 (380)
T PRK02769 185 ILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPM--PCGIVLAKKKYV-ERISVDVDYIGS 261 (380)
T ss_pred HHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCC--CcEEEEEehhhh-hhcccCccccCC
Confidence 467887 699999999874331 1 232 289999999999998653 356666765432 3321100
Q ss_pred ---HhcCCCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCC
Q 027424 66 ---NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 118 (223)
Q Consensus 66 ---~~~g~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 118 (223)
...| +-+...+..+-..|+. +..+.++..+.++.+.+.|++. ++.-+..|.
T Consensus 262 ~d~t~~G-SR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~ 320 (380)
T PRK02769 262 RDQTISG-SRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN 320 (380)
T ss_pred CCCCccC-CCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC
Confidence 0112 2221222223333333 5667788899999999999774 455555563
No 280
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=97.33 E-value=0.0033 Score=55.96 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=59.7
Q ss_pred ccCCEEEEecCCCCCCCcCc---ccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 4 AHGALLLVDNSIMSPVLSRP---LELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~~~p---l~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
++|+++|+|+++........ ++.. -=|++.|+||.++-.|..+|.++ . ++++.+.+....... ..+....+.
T Consensus 167 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv-~-~~~~i~~~~~~~~~~--~~~~~~q~~ 242 (337)
T PRK03967 167 ETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAI-A-NEEIIDALYRIKPPF--SLNILTMKI 242 (337)
T ss_pred hcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeee-c-CHHHHHHHHhhcCCC--CCCHHHHHH
Confidence 46999999999853211111 1111 12888999999986787876654 4 456666665544332 234444444
Q ss_pred HHhcHH---HHHHHHHHHHhHHHHHHHHHhcC
Q 027424 80 CLRGVK---TMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 80 l~~~l~---tl~~R~~~~~~na~~la~~L~~~ 108 (223)
+...++ .+..++++..++...+.+.|..+
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 243 VRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 443333 33445556666777788888764
No 281
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=97.32 E-value=0.0017 Score=60.49 Aligned_cols=119 Identities=17% Similarity=0.213 Sum_probs=65.6
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++.. +. +.-...-.|++ +++|.+++ +-.+|+ ++++ +++.+.+...........+
T Consensus 233 l~~~~g~llI~DEv~~g-~gr~G~~~a~~~~~~~pDii--tlsK~l~~-G~piga-v~~~-~~i~~~~~~~~~~~T~~~~ 306 (443)
T PRK08360 233 ILDEHGILLVVDEVQSG-LGRTGKWFAIEHFGVEPDII--TLGKPLGG-GLPISA-TIGR-AEIMDSLPPLAHAFTLSGN 306 (443)
T ss_pred HHHHcCCEEEEeccccC-CCcCccchhhhhcCCCCCEE--EecccccC-CceeEE-EEEc-HHHHhhhcCCCCCCCCCcC
Confidence 47899999999999742 21 11111224765 67999995 444544 5554 4565554322111122346
Q ss_pred hHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 74 PFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
|..+......|+.+... .++..+....+.+.|+ .+|.|..| +|.|.|+.+++
T Consensus 307 p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v------------------rg~Gl~~gie~ 364 (443)
T PRK08360 307 PVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDV------------------RGIGLMIGVDL 364 (443)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeee------------------eccceEEEEEE
Confidence 76666666777665321 2333333333333333 34544333 46899999998
No 282
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.31 E-value=0.0022 Score=65.14 Aligned_cols=54 Identities=24% Similarity=0.308 Sum_probs=41.0
Q ss_pred CccccCCEEEEecCCCCCC--CcCcccCCCcEEEecccccccCCc---ccceeEEEecC
Q 027424 1 MAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFIAGHS---DVMAGVLAVKG 54 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~--~~~pl~~GADivv~S~tK~l~G~~---d~~~G~v~~~~ 54 (223)
+||++|+.++||.+...+. ..+|-++|||+++-|.||+|+|+- ---.|.+.++.
T Consensus 691 iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~ 749 (993)
T PLN02414 691 IIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 749 (993)
T ss_pred HHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEch
Confidence 4799999999999975443 467889999999999999887541 12257776654
No 283
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=97.28 E-value=0.012 Score=53.26 Aligned_cols=169 Identities=18% Similarity=0.199 Sum_probs=94.6
Q ss_pred cCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHH-----------HHH--hcCC
Q 027424 5 HGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-----------LQN--AEGS 70 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-----------~~~--~~g~ 70 (223)
+|++++||.+-+.+. .|++. ..|+++-|.+|.++-+| .|++..+++.+ +++.. ... ..|
T Consensus 165 ~g~l~vVDavss~g~--~~idv~~~d~~~~ssqK~lgP~G---lg~l~~s~~~l-~~~~~~~~~~~~~~~~~~~~~~~~- 237 (360)
T PRK05355 165 GDVPLVADMSSDILS--RPIDVSKFGLIYAGAQKNIGPAG---LTIVIVREDLL-GRALPSIPSMLDYKTHADNDSMYN- 237 (360)
T ss_pred CCCcEEEEcCccccC--ccCCHHHccEEEEeccccccCCc---eEEEEECHHHH-hhcccCCChHHHHHHHHhcCCccC-
Confidence 689999999854332 33332 24699999999996433 45666665432 22211 011 112
Q ss_pred CCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 71 GLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
+.+-...|.+..+|+.+ ..+.+++.+.+..+.++|++.+. |.-+. .+.+ ..+.+++|.+.
T Consensus 238 Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~-----~~~~~-~~~~--------rs~~v~sf~~~ 303 (360)
T PRK05355 238 TPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF-----YRNPV-APED--------RSRMNVPFTLA 303 (360)
T ss_pred CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC-----cccCC-Chhh--------cCCcEEEEEcC
Confidence 22334455666666654 45668888889999999999872 21111 1110 14578999985
Q ss_pred CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 027424 145 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DVNDLISDLDKALR 219 (223)
Q Consensus 145 ~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~~dL~~dl~~Al~ 219 (223)
+.....+|++.+. .. | +++.+ .|. ..+.+|+|++.. |++.|++-|++.++
T Consensus 304 ~~~~~~~~~~~~~--~~----G----i~~~~---~~~------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 304 DEELDKKFLAEAK--AA----G----LVGLK---GHR------------SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ChHHHHHHHHHHH--HC----C----CcccC---CCC------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4433344544331 11 1 11111 110 236899999855 66667776666654
No 284
>PRK05965 hypothetical protein; Provisional
Probab=97.27 E-value=0.0058 Score=57.14 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=65.2
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-----HhcC
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-----NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-----~~~g 69 (223)
+|++||+++|+|+.... .+.+.-...-.||++- .|.++|.-.-+++ ++.+ +++.+.+..-. -..+
T Consensus 244 lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~a-v~~~-~~i~~~~~~~~~~~~~~~h~ 319 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTV--AKGLTSGYVPMGA-VLMS-DHVYQGIADGAGAAAPVGHG 319 (459)
T ss_pred HHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEe--chhhccCCcceeE-EEEc-HHHHHHHhcccccccccccc
Confidence 58999999999998521 1222222223699886 7999863123555 4454 45554442100 0122
Q ss_pred CC--CChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh---cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 SG--LAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~---~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.+ -+|..|...+..|+.+... +++..+....+.+-|+ ++|.|..| +|.|.|+.|+
T Consensus 320 ~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v------------------rG~Gl~~gie 381 (459)
T PRK05965 320 YTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDV------------------RGRGLLGALE 381 (459)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEE------------------eecceEEEEE
Confidence 12 3677777666666665321 1222333333333332 24444333 4789999999
Q ss_pred e
Q 027424 143 T 143 (223)
Q Consensus 143 ~ 143 (223)
+
T Consensus 382 ~ 382 (459)
T PRK05965 382 L 382 (459)
T ss_pred E
Confidence 8
No 285
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=97.27 E-value=0.0033 Score=58.46 Aligned_cols=116 Identities=18% Similarity=0.193 Sum_probs=63.8
Q ss_pred CccccCCEEEEecCCCCCCCc-----CcccCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~-- 71 (223)
+|+++|+++|+|+.+.. +.. ..-.+| .|+++ +.|.++| + .-.|+++++. ++...+. ...+.+
T Consensus 250 l~~~~g~lli~DEv~tG-~gr~G~~~a~~~~gv~pDivt--~~K~l~~-G-~p~gav~~~~-~i~~~~~---~~~~~T~~ 320 (441)
T PRK05769 250 LADKYGILLIDDEVQTG-MGRTGKMFAIEHFGVEPDIIT--LAKAIAG-G-LPLGAVIGRA-ELMFLPP---GSHANTFG 320 (441)
T ss_pred HHHHcCCEEEEechhhC-CCcccceehhhccCCCCCEEE--EcccccC-C-cccEEEEEeh-hhhhcCC---CCCCCCCC
Confidence 47899999999999642 211 011123 58886 6799986 3 3345565543 4432211 112222
Q ss_pred CChHhHHHHHhcHHHHHH-HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 72 LAPFDCWICLRGVKTMAL-RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~-R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
-+|..+...+..|+.+.. .+++..+....+.+.|+ ++|.+.. .+|.|.|+.+++
T Consensus 321 g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~------------------vrg~G~~~~i~~ 379 (441)
T PRK05769 321 GNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIGD------------------VRGLGLMIGVEL 379 (441)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eecceEEEEEEe
Confidence 267677666677776643 12333333344444333 2443333 246899999998
No 286
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.27 E-value=0.0045 Score=62.82 Aligned_cols=52 Identities=40% Similarity=0.611 Sum_probs=42.4
Q ss_pred CccccCCEEEEecCC-CCCCCcCcccCCCcEEEeccccc-----ccCCcccceeEEEecCh
Q 027424 1 MAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKGE 55 (223)
Q Consensus 1 ia~~~g~~lvVDnT~-~s~~~~~pl~~GADivv~S~tK~-----l~G~~d~~~G~v~~~~~ 55 (223)
+||++|++++||... +-.....|=++||||++-|++|+ ++|++ +|.+.++++
T Consensus 230 ~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~---aGflavr~~ 287 (954)
T PRK05367 230 AAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPH---AAYFAVRDA 287 (954)
T ss_pred HHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCC---EEEEEECHH
Confidence 479999999999865 33445678899999999999999 88885 788887753
No 287
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=97.27 E-value=0.0038 Score=59.15 Aligned_cols=122 Identities=18% Similarity=0.234 Sum_probs=66.4
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-----hcC
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-----~~g 69 (223)
+|+++|+++|+|+...+. +.+.-...-.||+ .+.|.++|.---+++ ++++ +++.+.+..... ..+
T Consensus 289 lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgK~lggG~~PigA-v~~~-~~i~d~~~~~~~~~~~~~h~ 364 (504)
T PLN02760 289 VLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLV--SLAKALSSAYMPIGA-VLVS-PEISDVIHSQSNKLGSFAHG 364 (504)
T ss_pred HHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEE--EecccccCCccccce-Eeec-HHHHhhhhcccccccCcccC
Confidence 589999999999986211 1111111226865 468999863223555 5454 456554432100 112
Q ss_pred CC--CChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 SG--LAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.+ -+|..|...+..|+-+... +++..+....+.+.|+. +|.|.. .+|.|.|+.++
T Consensus 365 ~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~------------------vrG~Gl~~gie 426 (504)
T PLN02760 365 FTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGE------------------IRGTGLILGTE 426 (504)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeee------------------EEeCceEEEEE
Confidence 12 3687777777777766432 23334444444443432 333322 35789999999
Q ss_pred eC
Q 027424 143 TG 144 (223)
Q Consensus 143 ~~ 144 (223)
+.
T Consensus 427 ~~ 428 (504)
T PLN02760 427 FV 428 (504)
T ss_pred Ee
Confidence 83
No 288
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=97.26 E-value=0.0072 Score=54.49 Aligned_cols=119 Identities=20% Similarity=0.232 Sum_probs=65.1
Q ss_pred CccccCCEEEEecCCCCCCCcC--cc---cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--PL---ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--pl---~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++++|+++. ++... +. ..| .|++ |++|.+++ +-.+ |+++.+ +++.+.+...........+
T Consensus 194 l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G~~i-g~~~~~-~~~~~~~~~~~~~~t~~~~ 267 (375)
T PRK04260 194 YCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLAN-GVPV-GAMLAK-SSLGGAFGYGSHGSTFGGN 267 (375)
T ss_pred HHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccC-Ccce-EEEEEc-HHHHhhcCCCCCCCCCCcC
Confidence 4788999999999973 33211 11 122 4654 89999984 3445 445554 4554444221111111236
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
|..+......|+.+. ...++..++...+.+.| ..+|.+..| ++.|.++.+++
T Consensus 268 ~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~ 325 (375)
T PRK04260 268 KLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV------------------RGLGYMIGIET 325 (375)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE------------------eccceEEEEEe
Confidence 777777777776653 22344444455544444 344433222 23577888887
No 289
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=97.25 E-value=0.0083 Score=54.87 Aligned_cols=107 Identities=20% Similarity=0.201 Sum_probs=71.9
Q ss_pred CccccCCEEEEecCCC-CCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHH-----------HHHHHHHhc
Q 027424 1 MAHAHGALLLVDNSIM-SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-----------ELYFLQNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~-s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~-----------~l~~~~~~~ 68 (223)
+|++||+.+|||..-+ .....++-++|.|+++.+.-|.++++- =.|.+..+++.+.. .|..+..++
T Consensus 156 ~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PP--Gla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~ 233 (383)
T COG0075 156 AAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPP--GLAFVAVSERALEAIEERKHPSFYLDLKKWLKYM 233 (383)
T ss_pred HHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCC--ccceeEECHHHHHHHhcCCCCceeecHHHHHHHH
Confidence 4788999999998743 344567778999999999999999774 23456555543210 122222221
Q ss_pred ---C--CCCCh-HhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 69 ---G--SGLAP-FDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 69 ---g--~~~sp-~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p 109 (223)
+ ..+.| ..-|-+..+|+. ++.|++||.+++.++.+.++.-.
T Consensus 234 ~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alG 285 (383)
T COG0075 234 EKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALG 285 (383)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 12344 344455556665 47899999999999999999654
No 290
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=97.25 E-value=0.0074 Score=55.11 Aligned_cols=193 Identities=21% Similarity=0.209 Sum_probs=103.0
Q ss_pred CccccCCEEEEecCCCC-CCCcCcccCCCcEEEecccccccCCcccceeEEEecCh-hHHHHHHH--H-H-HhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMS-PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYF--L-Q-NAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~-~~~~~l~~--~-~-~~~g~~~sp 74 (223)
+|+++|+++-||.+=+- -+..++-++|+|+..-|.||..+--+ + |++..++. .+...+.- + + ...| +..-
T Consensus 166 i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkG--i-GaLyv~~~~~~~p~i~GGgQE~g~RsG-Tenv 241 (386)
T COG1104 166 ICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKG--I-GALYVRPGVRLEPLIHGGGQERGLRSG-TENV 241 (386)
T ss_pred HHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCc--e-EEEEECCCCccCceeccCcCCCCCCCC-CccH
Confidence 47899999999999544 34456666789999999999987544 3 44555542 11111100 0 0 0011 1111
Q ss_pred HhHHH----HHhcHHHHHHHHHHHHhHHHHHHHHHhcC-CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 75 FDCWI----CLRGVKTMALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 75 ~da~l----l~~~l~tl~~R~~~~~~na~~la~~L~~~-p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
-...- +.-..+.+..+.++...--.++.+.|++. |.| .++ . - + .....+.+.|.+.+.+ .
T Consensus 242 ~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~-~~~-g-~---~--------~~rlP~~~~~~f~gv~-g 306 (386)
T COG1104 242 PGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDV-YLN-G-D---D--------EPRLPNILNFSFPGVE-G 306 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE-EEc-C-C---c--------ccCCCCeEEEEeCCCc-H
Confidence 00111 11122233344444444445555666655 543 222 1 1 1 1124567777774432 4
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCC----CeEEEEecCCC----HHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE----DLVRISVGIED----VNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGlEd----~~dL~~dl~~Al~~ 220 (223)
+.++-.|+.-.+++|-|..-|--. -.+......+|+++ +.||||.|-.. ++..++-|.+++++
T Consensus 307 E~ll~~L~~~gI~vStGSACsS~~--------~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 307 ESLLLALDLAGIAVSTGSACSSGS--------LEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred HHHHHhccccCeEEeccccccCCC--------CCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 455667777777889886433210 01223456777753 78999999664 45555555555543
No 291
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.25 E-value=0.003 Score=63.69 Aligned_cols=154 Identities=21% Similarity=0.210 Sum_probs=90.4
Q ss_pred CccccCCEEEEecCCCC--CCCcCcccCCCcEEEecccccccCC---cccceeEEEecChhHHHHHH-----HH------
Q 027424 1 MAHAHGALLLVDNSIMS--PVLSRPLELGADIVMHSATKFIAGH---SDVMAGVLAVKGERLAKELY-----FL------ 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s--~~~~~pl~~GADivv~S~tK~l~G~---~d~~~G~v~~~~~~~~~~l~-----~~------ 64 (223)
+||++|..++||.+... ....+|-++|||+++-|.||+|+++ |---.|.+.++. .+...+- ..
T Consensus 653 iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~-~L~~~lPg~~v~~t~d~~gr 731 (939)
T TIGR00461 653 IVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKS-HLIPFLPKHDVVSMITGIGG 731 (939)
T ss_pred HHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhh-hchhhcCCCcccccccCCCC
Confidence 47999999999999633 2346788899999999999987733 112357777764 2221110 00
Q ss_pred HHhcCCCCC-hHh---------HHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCC--------------
Q 027424 65 QNAEGSGLA-PFD---------CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP-------------- 120 (223)
Q Consensus 65 ~~~~g~~~s-p~d---------a~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~-------------- 120 (223)
....|...+ ++. .|+.+.|-+-+..-.+....||..+++.|++++ .+.||+-.
T Consensus 732 eq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~---~~l~~~~~~~~~hEfv~~~~~~ 808 (939)
T TIGR00461 732 SKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHY---PILFVGTLKHVAHECILDLRPL 808 (939)
T ss_pred ccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccC---cccccCCCCceeEEEEEeccch
Confidence 001122222 221 233333444455556778889999999998865 45565411
Q ss_pred ----CCcchHHHHhhhC-CC-Ce--------eEEEEe---CCHHHHHHHHhhcCc
Q 027424 121 ----EHPGHELHYSQAK-GA-GS--------VLSFLT---GSLALSKHVVETTKY 158 (223)
Q Consensus 121 ----~~~~~~~~~~~~~-g~-gg--------l~sf~~---~~~~~~~~f~~~l~l 158 (223)
+-+.-+++++.+. |+ ++ -+.++. .+++..++|++.+.-
T Consensus 809 ~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~ 863 (939)
T TIGR00461 809 KAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIA 863 (939)
T ss_pred hhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHH
Confidence 1123456666542 21 21 233432 467888999888744
No 292
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=97.24 E-value=0.017 Score=53.97 Aligned_cols=113 Identities=19% Similarity=0.224 Sum_probs=68.6
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-C---CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~---GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++++++|=|+.++--.. ..|+. + |==|.+.|++|++. ++..+|+++ + ++++.+++...........
T Consensus 255 lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv-~-p~~~~~~~~~~k~~~~~~~ 331 (459)
T COG1167 255 LAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVV-A-PPELIEKLLRLKQAADLGP 331 (459)
T ss_pred HHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeee-C-CHHHHHHHHHHHHHhcCCC
Confidence 47899999999999754221 11222 1 22388999999997 677776644 4 5567676666555444444
Q ss_pred ChHh-----HHHHHhc-HHHHHHHHHHHHhHH-HHHHHHHhcCC-CeeEEEcC
Q 027424 73 APFD-----CWICLRG-VKTMALRVEKQQDNA-QKIAEFLASHP-RVKKVNYA 117 (223)
Q Consensus 73 sp~d-----a~ll~~~-l~tl~~R~~~~~~na-~~la~~L~~~p-~v~~V~yP 117 (223)
+... .++. .| .+....|+++..+.- ..+.+.|+++. ....+..|
T Consensus 332 s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p 383 (459)
T COG1167 332 SSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRP 383 (459)
T ss_pred ChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC
Confidence 5543 2222 32 455556665554444 45677888874 35566666
No 293
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=97.21 E-value=3.8e-05 Score=67.73 Aligned_cols=111 Identities=22% Similarity=0.211 Sum_probs=68.3
Q ss_pred CccccCCEEEEecCC------CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC-
Q 027424 1 MAHAHGALLLVDNSI------MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA- 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~------~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s- 73 (223)
+||++|++|.+|-+= ......+-+..++|+|.-|+||.++.. +|++|+.+ +++.++-+.++...|..+.
T Consensus 153 ~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~---~Gavl~~~-~~~i~~~~~~~k~~gg~~~~ 228 (290)
T PF01212_consen 153 LAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAP---GGAVLAGN-KEFIAKARRQRKRLGGGMRQ 228 (290)
T ss_dssp HHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SS---SEEEEEES-HHHHHHHHHHHHHHTHHHHH
T ss_pred HHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccc---cceEEEec-hHHHHHHHHHHHHhccCeee
Confidence 489999999999882 111112233468999999999999865 35666555 4544433334444443221
Q ss_pred --hHhH---H--HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 74 --PFDC---W--ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 74 --p~da---~--ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
..-+ | ..++.++....++.+.+++|++|++-|+..+.+ +.+|
T Consensus 229 ~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~~--~~~~ 277 (290)
T PF01212_consen 229 AGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEALGGV--LPRP 277 (290)
T ss_dssp TTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEECEE--EETT
T ss_pred cceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCCc--ccCC
Confidence 1111 1 223334445678899999999999999998864 5555
No 294
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.19 E-value=0.0048 Score=57.38 Aligned_cols=117 Identities=16% Similarity=0.243 Sum_probs=66.3
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--CC
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--GL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~~ 72 (223)
+|+++|+++|+|+.... + +.+.-...-.||++ +.|.++| +--+++++ .+++ + +.+.. ...+. .-
T Consensus 235 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G~Pigav~-~~~~-~-~~~~~--~~~~~T~~g 306 (442)
T TIGR00709 235 VTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-GLPLAVLL-IAPE-F-DAWQP--AGHTGTFRG 306 (442)
T ss_pred HHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-CcccEEEE-EchH-H-hccCC--CcCCCCCCc
Confidence 58999999999999532 1 11111122368988 7999998 65565544 5543 3 22211 11122 23
Q ss_pred ChHhHHHHHhcHHHHHH-H-HHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTMAL-R-VEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~-R-~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+|..+...+..|+.+.. . .++..+....+.+.|+ +||.|..| +|.|.|+++++
T Consensus 307 npla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v------------------rG~Gl~~~ie~ 365 (442)
T TIGR00709 307 NQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNV------------------RGRGLMQGIMI 365 (442)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeee------------------eccceEEEEEE
Confidence 67777777777776532 1 1222333333333333 45555444 46899999998
No 295
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.19 E-value=0.0046 Score=57.97 Aligned_cols=124 Identities=21% Similarity=0.236 Sum_probs=81.4
Q ss_pred CccccCCEEEEecCCCCCCC--cCc-cc----C-CCcEEEecccccccCCcccceeEEEecChh-HHHHHHHHHHhcCC-
Q 027424 1 MAHAHGALLLVDNSIMSPVL--SRP-LE----L-GADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQNAEGS- 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--~~p-l~----~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~~~~l~~~~~~~g~- 70 (223)
||+++|+++-||.++|..+. .++ .. + +||=|+-|.|||+- .=.-+|++..++++ +.+.+.....+.+.
T Consensus 232 ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~--aP~~~G~il~rd~e~l~~~~~~~~~yl~~~ 309 (460)
T COG0076 232 IAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGL--APIGCGVVLFRDEEALRRILIFADYYLPGG 309 (460)
T ss_pred HHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccC--CCCCceEEEEECHHHhhhhhhcccccCCCC
Confidence 57899999999999987542 111 11 1 89999999999966 33457777788873 43333221111110
Q ss_pred ----------CC--ChHhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCC
Q 027424 71 ----------GL--APFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 136 (223)
Q Consensus 71 ----------~~--sp~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g 136 (223)
-+ ...-.|..++.+ +-+..-+++..++|+++++.|++.+..+-|.-| -.
T Consensus 310 ~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-----------------~l 372 (460)
T COG0076 310 GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEP-----------------EL 372 (460)
T ss_pred CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC-----------------cc
Confidence 01 113345444433 456677788999999999999999866666656 45
Q ss_pred eeEEEEe
Q 027424 137 SVLSFLT 143 (223)
Q Consensus 137 gl~sf~~ 143 (223)
++++|..
T Consensus 373 ~~V~fr~ 379 (460)
T COG0076 373 PIVAFRL 379 (460)
T ss_pred ceEEEEc
Confidence 7888887
No 296
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.18 E-value=0.0045 Score=56.46 Aligned_cols=106 Identities=25% Similarity=0.253 Sum_probs=79.8
Q ss_pred CccccCCEEEEecCC--CCCCCcCcccCCCcEEEecc--cccccCCcccceeEEEecChhHHHHHHHHHHhcCCC-----
Q 027424 1 MAHAHGALLLVDNSI--MSPVLSRPLELGADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG----- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~--~s~~~~~pl~~GADivv~S~--tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~----- 71 (223)
+|++||++||-|.+. |+-+--+..=--.|+.+-|. +|-+.- - -||+|++|+++++++++.++. .|..
T Consensus 144 la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~itt--g-EGGav~tnd~ela~k~~~lr~-hG~~~~~~~ 219 (374)
T COG0399 144 LAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTT--G-EGGAVVTNDEELAEKARSLRN-HGLSRDAVF 219 (374)
T ss_pred HHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccc--c-CceEEEeCCHHHHHHHHHHHH-hCcCCCccc
Confidence 589999999999995 44443333222258888886 576762 2 599999999999888776542 2221
Q ss_pred ------------CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 72 ------------LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 72 ------------~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
|+-..|.+.+.-|+.+...+++..+++....+.|+..|.
T Consensus 220 ~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~ 270 (374)
T COG0399 220 KYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPG 270 (374)
T ss_pred cceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 345677788888999999999999999999999999886
No 297
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.15 E-value=0.001 Score=59.71 Aligned_cols=118 Identities=21% Similarity=0.315 Sum_probs=66.3
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~ 72 (223)
+|+++|+++|+|++... .+.+.-...-+||++-| |.++|. --+ |+++.+ +++.+.+... ..+.+ -
T Consensus 206 lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG-~p~-sav~~~-~~i~~~~~~~--~~~~T~~g 278 (339)
T PF00202_consen 206 LCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGG-LPI-SAVLGS-EEIMEAFQPG--SHGSTFGG 278 (339)
T ss_dssp HHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTT-SSE-EEEEEE-HHHHTTSCTT--SSTCTTTT
T ss_pred cccccccceecccccccccccCCccceecccccCcccccc--cchhhh-hhc-cccccc-chhhcccccc--cccccccc
Confidence 48999999999999632 22223333457999987 999985 444 445454 3454432111 12222 3
Q ss_pred ChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHH---HHhc-CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTMALR--VEKQQDNAQKIAE---FLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R--~~~~~~na~~la~---~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
.|..+......|+.+... .++..+....+.+ .|++ +|.|.+|. |.|-|+++++
T Consensus 279 ~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vr------------------g~Gl~~~ie~ 337 (339)
T PF00202_consen 279 NPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVR------------------GIGLMIGIEL 337 (339)
T ss_dssp -HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE------------------EETTEEEEEE
T ss_pred chHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe------------------eeCeEEEEEE
Confidence 577777776777665432 2222233333333 3333 47776655 6788999887
No 298
>PRK06105 aminotransferase; Provisional
Probab=97.12 E-value=0.011 Score=55.40 Aligned_cols=121 Identities=17% Similarity=0.258 Sum_probs=66.9
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-----hcC
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-----~~g 69 (223)
+|+++|+++|+|+...+ + +.+.-...-.||+ .+.|.++|.-.- .|+++.+ +++.+.+..... ..+
T Consensus 247 lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~--~~gK~lggG~~P-~~av~~~-~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 247 VLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDIL--VMSKQLSSSYQP-LSAVLMN-EKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCee--eeecccccCccc-ceEEEEc-HHHHHHHhcccccCcccccC
Confidence 48999999999998621 1 1112112225877 568999863122 4445554 456554432100 011
Q ss_pred --CCCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh---cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 --SGLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 --~~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~---~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
..-+|..+...+..|+.+... +++..+....+.+.|+ +||.|..| +|.|.|+.|+
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~v------------------rG~Gl~~gie 384 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEV------------------RGVGLIAAVE 384 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEE------------------EecceEEEEE
Confidence 124777777777777776532 2333344444444333 34444333 4789999999
Q ss_pred e
Q 027424 143 T 143 (223)
Q Consensus 143 ~ 143 (223)
+
T Consensus 385 ~ 385 (460)
T PRK06105 385 L 385 (460)
T ss_pred E
Confidence 8
No 299
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=97.12 E-value=0.0059 Score=57.12 Aligned_cols=118 Identities=16% Similarity=0.152 Sum_probs=65.8
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+... ++. +.-...-.||++ +.|.++| +--+ |+++++ +++.+ ...-........+
T Consensus 251 lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~pi-~av~~~-~~i~~-~~~~~~~~T~~g~ 323 (457)
T PRK05639 251 LLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGVAS-GMGL-SGVIGR-KELMD-LTSGSALLTPAAN 323 (457)
T ss_pred HHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhhcC-CCcc-eeEEeh-HHHHh-hcCCCcccCCCcC
Confidence 4889999999999964 221 111122369998 8999986 3334 445454 44544 1110001112346
Q ss_pred hHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 74 PFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
|..+...+..|+.+... +++..+....+.+.|+ ++|.+..| +|.|.|+.+++
T Consensus 324 p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~V------------------rG~Gl~~gve~ 381 (457)
T PRK05639 324 PVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDV------------------RGKGLMIGVEI 381 (457)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEee------------------ccceeEEEEEE
Confidence 77666666666665321 2333334444444443 35544443 47899999988
No 300
>PRK06541 hypothetical protein; Provisional
Probab=97.10 E-value=0.01 Score=55.49 Aligned_cols=121 Identities=17% Similarity=0.225 Sum_probs=67.1
Q ss_pred CccccCCEEEEecCCCC-C-----CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC--C
Q 027424 1 MAHAHGALLLVDNSIMS-P-----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG--S 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-~-----~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g--~ 70 (223)
+|+++|+++|+|+...+ + +.+.-...-.||++ +.|.++|.-.-+|+ ++.+ +++.+.+..... ..+ .
T Consensus 250 lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G~~piga-v~~~-~~i~~~~~~~~~~~~~~~T~ 325 (460)
T PRK06541 250 ICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSGYSPLGA-MIAS-DRLFEPFLDGPTMFLHGYTF 325 (460)
T ss_pred HHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCCccceeE-EEEc-HHHHHHhhcCCCccccCCCC
Confidence 48999999999999621 1 11111112368886 89999852113555 4454 445444321111 111 1
Q ss_pred CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhcC---CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 71 GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASH---PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~~---p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
..+|..+...+..|+.+... .++..+....+.+.|++. |.|.. .+|.|.|+.+++
T Consensus 326 ~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~------------------vrg~Gl~~~ie~ 385 (460)
T PRK06541 326 GGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGD------------------VRGDGYFYGIEL 385 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEE------------------EEecceEEEEEE
Confidence 24677777777777765321 345555555555555542 32222 346899999998
No 301
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.09 E-value=0.011 Score=55.14 Aligned_cols=170 Identities=15% Similarity=0.225 Sum_probs=90.7
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----HhcCC
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----~~~g~ 70 (223)
+|++||+++|+|+.... .+.+.-...-.||++- .|-++|.-.-+++ ++.++ ++.+.+..-. ...+.
T Consensus 251 lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~--gKgl~gG~~Pi~a-v~~~~-ei~~~~~~~~~~~~~~~~~ 326 (453)
T PRK06943 251 LCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCL--SKGISGGYLPLSL-VLSRD-AIFAAFYDDDVTRGFLHSH 326 (453)
T ss_pred HHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEee--ehhhccCcccceE-EEEcH-HHHHhhcccCccCCccCCC
Confidence 58999999999998521 1112222223799986 7988862123554 54544 5554442100 01222
Q ss_pred C--CChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 71 G--LAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 71 ~--~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+ -+|..|...+..|+.+..- +++..+....+.+-|++ +|.|.. .+|.|.|+.+++
T Consensus 327 T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~------------------vrG~Gl~~gvel 388 (453)
T PRK06943 327 SYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRH------------------LRQRGTIFAFDV 388 (453)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEe------------------EeccccEEEEEE
Confidence 2 2677777777777766421 23333333444444432 343333 357899999998
Q ss_pred C-CH----HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHH
Q 027424 144 G-SL----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDL 214 (223)
Q Consensus 144 ~-~~----~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl 214 (223)
. +. +...+|...+ +..+.-+ .| ..+.+||+ +--||.+.+++-|
T Consensus 389 ~~~~~~~~~~~~~i~~~~--~~~Gll~--------~~------------------~g~~l~~~Ppl~it~~eid~~~~~l 440 (453)
T PRK06943 389 ALDGDAARTFSRRFFEAA--LERELLL--------RP------------------IGTTVYLMPPYVLDDDEIAWLAERT 440 (453)
T ss_pred ccCCCcchHHHHHHHHHH--HHCCcEE--------Ee------------------cCCEEEEeCCCcCCHHHHHHHHHHH
Confidence 3 22 1233444332 1111111 00 11336665 6667888899999
Q ss_pred HHHHhc
Q 027424 215 DKALRT 220 (223)
Q Consensus 215 ~~Al~~ 220 (223)
+++|+.
T Consensus 441 ~~al~~ 446 (453)
T PRK06943 441 RATLDA 446 (453)
T ss_pred HHHHHH
Confidence 988874
No 302
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.07 E-value=0.0054 Score=61.75 Aligned_cols=42 Identities=29% Similarity=0.508 Sum_probs=34.5
Q ss_pred CccccCCEEEEecCCCC-CC-CcCcccCCCcEEEecccccccCC
Q 027424 1 MAHAHGALLLVDNSIMS-PV-LSRPLELGADIVMHSATKFIAGH 42 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-~~-~~~pl~~GADivv~S~tK~l~G~ 42 (223)
+||++|++|+||.+..- .. ..+|-++|||+++-|++|+++++
T Consensus 666 iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P 709 (954)
T PRK12566 666 VVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIP 709 (954)
T ss_pred HHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcC
Confidence 47999999999999642 33 35578999999999999999854
No 303
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=97.07 E-value=0.0033 Score=57.69 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=66.0
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-HhcC--CC
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEG--SG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~~~g--~~ 71 (223)
+|+++|+++|+|+.+. ++. +.-...-.|++ +++|.+++ +-.+ |+++++ +++.+.+.... ...+ ..
T Consensus 224 l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~~pDi~--t~sK~l~~-G~pi-g~v~~~-~~i~~~~~~~~~~~~~~T~~ 297 (423)
T TIGR00713 224 LTEEYGSLLIFDEVMT-GFRVALGGAQEYFGVEPDLT--TLGKIIGG-GLPV-GAFGGR-REIMERLAPEGPVYQAGTLS 297 (423)
T ss_pred HHHHhCCEEEEEcccc-ccccCcchhHHHhCCCcchh--hhhhhhcC-CCce-eeeeEH-HHHHHhhCcCCCeeeccCCC
Confidence 4789999999999973 321 11112235755 69999984 4444 556554 45655553210 0111 13
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHHhHHHHH----HHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKI----AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~~na~~l----a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
.+|..+...+..|+.+.. ..++..+....+ .+.+++++.+..|. +.|+++.+++.
T Consensus 298 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~------------------~~g~~~~v~~~ 358 (423)
T TIGR00713 298 GNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN------------------RVGSMFSLFFT 358 (423)
T ss_pred CCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------eeccEEEEEEe
Confidence 577777777777775532 233333333333 33445565443333 46888888763
No 304
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=97.05 E-value=0.012 Score=53.99 Aligned_cols=166 Identities=18% Similarity=0.230 Sum_probs=88.0
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~-- 71 (223)
+|+++|+++|+|+.... + .+.-+..-.||++- .|.++| +--+ |+++.+. ++.. + .....+.+
T Consensus 208 l~~~~~~llI~DEv~tG-~GRtG~~~a~~~~gv~PDi~t~--gK~lg~-G~p~-~av~~~~-~i~~-~--~~~~~~~T~~ 278 (395)
T PRK03715 208 LTKQHGLLLIVDEVQTG-CGRTGTLFAYELSGIEPDIMTL--GKGIGG-GVPL-AALLAKA-EVAV-F--EAGDQGGTYN 278 (395)
T ss_pred HHHHcCCEEEEeccccC-CCCCcchhhHhhcCCCCceeee--hhhhhC-Ccce-EEEEEcc-cccc-c--cCCCcCCCCC
Confidence 47899999999998642 2 11222234687655 599997 3334 4455554 4421 1 11112222
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH--H
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--A 147 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--~ 147 (223)
-+|..+...+..|+.+.. ..++..+....+.+.|++... .|| +. ..+|.|.|+++++.++ .
T Consensus 279 g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~-i~----------~vrG~Glm~~i~l~~~~~~ 343 (395)
T PRK03715 279 GNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSE----ERG-LE----------GERGEGLLRALLLGKDIGP 343 (395)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh----cCC-cC----------eEEcceeEEEEEecCchHH
Confidence 357777777777777642 234444444444444442110 111 11 1246899999999542 2
Q ss_pred HHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 148 LSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 148 ~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
.+.+....+ .++-. + +.+..|||+.-+ |+.+.+++.|+++|+.
T Consensus 344 ~~~~~~~~~~~~Gi~~~-------------~-----------------~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 344 QIVEKARDMQPDGLLLN-------------A-----------------PRPNLLRFMPALNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred HHHHHHHhccCCCEEEe-------------e-----------------cCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 222222333 22210 0 012458888775 4577777888887764
No 305
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0086 Score=55.83 Aligned_cols=169 Identities=18% Similarity=0.258 Sum_probs=90.5
Q ss_pred CccccCCEEEEecCC------CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH-HHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSI------MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~------~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-~~~~~g~~~s 73 (223)
+|++||+++|+|+-= |.-|-+.-...=.|||+. .|.++| +.=+++ |+.++ ++...... ....+| =+
T Consensus 251 ~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~--aK~ig~-G~Pl~a-vv~r~-ei~~~~~g~~~~Tf~--GN 323 (447)
T COG0160 251 LCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL--AKSLGG-GLPLSA-VVGRA-EIMDWPPGGHGGTFG--GN 323 (447)
T ss_pred HHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEe--cccccC-CCceeE-EeccH-HhcccCCcccCCCCC--cC
Confidence 589999999999983 111222222223699985 599997 655555 54554 44331000 111122 26
Q ss_pred hHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh--------cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-C
Q 027424 74 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA--------SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-G 144 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R~~~~~~na~~la~~L~--------~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~ 144 (223)
|..|...+.-|+.++.- ...+|+.++-++|. +||.|..| +|-|-|+.+|+ .
T Consensus 324 pva~Aaa~AvL~vie~e--~L~~~a~~~G~~l~~~L~~l~~~~~~IgdV------------------RG~Glm~giE~v~ 383 (447)
T COG0160 324 PVACAAALAVLDVIEEE--NLLERAAELGEYLRDRLEELQEKHPLIGDV------------------RGLGLMIGVELVK 383 (447)
T ss_pred HHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHhhcCceecc------------------cccceEEEEEEec
Confidence 77666666666654332 44444444444443 45555444 47889999997 2
Q ss_pred C-------HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHH
Q 027424 145 S-------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISD 213 (223)
Q Consensus 145 ~-------~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv----GlEd~~dL~~d 213 (223)
+ .+.+.++++.+. ..+..+. ..|...+.|||.- -=|+.+..++-
T Consensus 384 d~~t~~p~~~~~~~i~~~~~--~~Glil~-----------------------~~G~~~nviRi~PPL~is~e~~d~~l~i 438 (447)
T COG0160 384 DRDTKEPDAELAAKIVARAF--ERGLLLL-----------------------TCGPHGNVLRILPPLTISDEELDEGLDI 438 (447)
T ss_pred CCCCCCCCHHHHHHHHHHHH--HcCCEEe-----------------------ccCCCCcEEEEeCCcccCHHHHHHHHHH
Confidence 2 144555554431 1111110 1122344455543 23567788888
Q ss_pred HHHHHhcC
Q 027424 214 LDKALRTG 221 (223)
Q Consensus 214 l~~Al~~~ 221 (223)
|++||..+
T Consensus 439 l~~al~~~ 446 (447)
T COG0160 439 LEEALKEA 446 (447)
T ss_pred HHHHHHhh
Confidence 88888754
No 306
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.04 E-value=0.006 Score=57.15 Aligned_cols=115 Identities=18% Similarity=0.181 Sum_probs=64.1
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~ 72 (223)
+|+++|+++|+|+.... + +.+.-...-.||++- .|-++| +--+++ ++.++ ++ +.+.. ...+.+ -
T Consensus 260 lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gKglgg-G~PlsA-v~~~~-~~-~~~~~--~~~~~T~~g 331 (464)
T PRK06938 260 ITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVL--SKAIGG-SLPLAV-VVYRE-WL-DTWQP--GAHAGTFRG 331 (464)
T ss_pred HHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEe--eccccC-CCceEE-Eeehh-Hh-hccCC--CCCCCCCCc
Confidence 58999999999998421 1 112222223699886 799986 444555 54553 33 22210 112222 3
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHH--------hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFL--------ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L--------~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+|..+...+..|+.+... +..+|+.++.++| ++||.|..| +|.|.|+.+++
T Consensus 332 npla~Aaa~a~L~~l~~~--~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V------------------rG~Glm~gie~ 390 (464)
T PRK06938 332 NQMAMAAGSATLRYIKEH--RLAEHAAAMGERLREHLRQLQRDYPQLGDV------------------RGRGLMLGVEI 390 (464)
T ss_pred CHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhCCCeeee------------------eccceEEEEEe
Confidence 677777666677665321 2333333333333 235555444 47899999998
No 307
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=97.01 E-value=0.021 Score=53.22 Aligned_cols=170 Identities=17% Similarity=0.208 Sum_probs=89.6
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-------HHh
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-------~~~ 67 (223)
+|+++|+++|+|+.... ++.+.-...-.||+ .+.|.++|..--+++ ++.+ +++.+.+..- ...
T Consensus 247 lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~--~~gK~l~gG~~Pi~a-v~~~-~~i~~~~~~~~~~~~~~~~~ 322 (445)
T PRK09221 247 ICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDII--TFAKGLTNGAIPMGA-VIAS-DEIYDAFMQGPEYAIEFFHG 322 (445)
T ss_pred HHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEE--EeccccccCccccee-eEEc-HHHHHhhccCcccccccccc
Confidence 48899999999998632 11111111124876 567998853223454 5444 4555443210 001
Q ss_pred cCCCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 68 EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.....+|..+...+..|+.+.. .+++..+....+.+.|++ +|.|.. .+|.|.|+.++
T Consensus 323 ~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~------------------vrg~Gl~~~v~ 384 (445)
T PRK09221 323 YTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVID------------------IRNIGLVAGIE 384 (445)
T ss_pred cCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEE------------------EecCceEEEEE
Confidence 1112477777777777777642 234444455555555543 233322 24678888888
Q ss_pred eCCH-----HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHH
Q 027424 143 TGSL-----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISD 213 (223)
Q Consensus 143 ~~~~-----~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~d 213 (223)
+... ..+.++.+.+. ..+.-+ .+ ..+.+||+ +--|+++.+++-
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~--~~Gv~~--------~~------------------~~~~lr~~Ppl~~t~~eid~~~~~ 436 (445)
T PRK09221 385 LAPRPGAPGARGYEAFMKCF--EKGLLV--------RY------------------TGDTIALSPPLIIEKAQIDELVDA 436 (445)
T ss_pred EecccccccchHHHHHHHHH--HCCeEE--------ee------------------cCCEEEEECCccCCHHHHHHHHHH
Confidence 7321 11223332221 111000 00 12457777 566788899999
Q ss_pred HHHHHhc
Q 027424 214 LDKALRT 220 (223)
Q Consensus 214 l~~Al~~ 220 (223)
|+++|+.
T Consensus 437 l~~~l~~ 443 (445)
T PRK09221 437 LGDALRA 443 (445)
T ss_pred HHHHHHh
Confidence 9998875
No 308
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.01 E-value=0.0029 Score=58.44 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=68.7
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hc--CCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AE--GSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~--g~~ 71 (223)
+|+++|+++|+|+.+. ++. +.-+..-.|+ .+++|.+++ +--+| +++.+ +++.+.+..... .. ..+
T Consensus 226 l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK~l~~-G~p~g-a~~~~-~~i~~~~~~~~~~~~~~T~~ 299 (426)
T PRK00062 226 LCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGKIIGG-GLPVG-AFGGR-REIMEQLAPLGPVYQAGTLS 299 (426)
T ss_pred HHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--HhhhhHhhC-CCcce-eeeEH-HHHHHhhccCCCceecccCc
Confidence 4789999999999963 221 1111112464 578899985 33344 45454 456555531111 11 123
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
.+|..+...+..|+.+.. ..++..++...+.+.|+ ++|.+..| +|.|.|+++++.
T Consensus 300 ~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v------------------rg~G~~~~i~l~ 360 (426)
T PRK00062 300 GNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTV------------------NRVGSMFGLFFT 360 (426)
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEE------------------EEecceEEEEEe
Confidence 577777777777777643 34555555555555554 34543332 357999999883
No 309
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=97.01 E-value=0.01 Score=52.60 Aligned_cols=59 Identities=25% Similarity=0.453 Sum_probs=40.8
Q ss_pred CccccCCEEEEecCCCCCCC---c---CcccCCC-cEEEeccccc-ccCCcccceeEEEecChhHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL---S---RPLELGA-DIVMHSATKF-IAGHSDVMAGVLAVKGERLAKELYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~---~---~pl~~GA-Divv~S~tK~-l~G~~d~~~G~v~~~~~~~~~~l~~~ 64 (223)
+|++||+||++||++|.|+. + .|+ ++- =|.|.|++|. +.| .-.|.++.| +++...+..+
T Consensus 207 lA~~~giPliIDnAYg~PFP~iifsd~~~~-w~~NiilC~SLSK~GLPG---~R~GIiIan-e~viqaitnm 273 (417)
T COG3977 207 LARQHGIPLIIDNAYGVPFPGIIFSDATPL-WNENIILCMSLSKLGLPG---SRCGIIIAN-EKVIQAITNM 273 (417)
T ss_pred HhhhcCCcEEEecccCCCCCceeccccccc-CCCCEEEEeehhhcCCCC---cceeEEEcc-HHHHHHHHhc
Confidence 58899999999999999874 1 222 343 3779999997 333 347877654 5666655543
No 310
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.01 E-value=0.012 Score=54.46 Aligned_cols=165 Identities=22% Similarity=0.238 Sum_probs=85.3
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH---HHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY---FLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~---~~~~~~g~ 70 (223)
+|+++|+++|+|+... ++. +.-+..-.||++ +.|.+. ++|++. +. ++.+... ......+.
T Consensus 247 lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~-~~-~i~~~~~~~~~~~~~~~~ 316 (431)
T TIGR03251 247 LCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMA-GR-RVDEVADNVFAVPSRLNS 316 (431)
T ss_pred HHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEe-cc-hHHHhhhhcccCccccCC
Confidence 4899999999999964 221 112223479987 567652 456553 33 2211111 00111122
Q ss_pred --CCChHhHHHHHhcHHHHHH-H-HHHHHhHHHHHHHHHh----cCC-CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 71 --GLAPFDCWICLRGVKTMAL-R-VEKQQDNAQKIAEFLA----SHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~~-R-~~~~~~na~~la~~L~----~~p-~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
+-+|..+......|+.+.. . .++..+....+.+.|+ ++| .+.. .+|.|.|+.+
T Consensus 317 T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~------------------vrg~G~~~~i 378 (431)
T TIGR03251 317 TWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSN------------------PRGRGLMCAF 378 (431)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceec------------------ccccceeEEE
Confidence 2467777777777776532 1 2333333344443333 344 2222 2467999999
Q ss_pred EeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 142 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 142 ~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
++.+.+...++...+. ..+.-+ .|. ....+||+..+--.++=++.+-++|++
T Consensus 379 ~~~~~~~~~~~~~~l~--~~Gvl~--------~~~-----------------g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 379 DLPSTADRDEVIRQLY--REGVLL--------LGC-----------------GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EeCCHHHHHHHHHHHH--hCCeEE--------ecC-----------------CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 9965544555554432 111110 110 124589888877666656666566543
No 311
>PRK06062 hypothetical protein; Provisional
Probab=96.99 E-value=0.005 Score=57.47 Aligned_cols=118 Identities=19% Similarity=0.296 Sum_probs=64.7
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--C
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--G 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~ 71 (223)
+|+++|+++|+|+.... +. +.-...-.||++ +.|.++|.-.-+++ ++.++ ++.+.+....-..+. .
T Consensus 243 lc~~~g~lLI~DEV~tG-fGRtG~~~a~~~~gv~PDi~t--~gK~lggG~~Piga-v~~~~-~i~~~~~~~~~~~~~T~~ 317 (451)
T PRK06062 243 LCDRHGIVLIADEVMAG-FGRTGKWFAIEHFGVVPDLIT--FAKGVNSGYVPLGG-VAISE-AIAATFADRPYPGGLTYS 317 (451)
T ss_pred HHHHcCCEEEeeccccC-CCcCcHHHHHHhcCCCCCeee--echhhhcCCcCcEE-EEEcH-HHHHHhccCCCCCCCCCC
Confidence 48999999999999642 21 111222368775 68999962113555 44554 565544311001121 2
Q ss_pred CChHhHHHHHhcHHHHHHHHHHHHhHHHHH---------HHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 72 LAPFDCWICLRGVKTMALRVEKQQDNAQKI---------AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R~~~~~~na~~l---------a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
-+|..+...+..|+.+... ...+++..+ .+..+.+|.|..|. |.|.|+.++
T Consensus 318 gnpl~~Aaa~a~L~~l~~~--~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr------------------G~Gl~~gve 377 (451)
T PRK06062 318 GHPLACAAAVATINAMEEE--GIVENAARIGAEVLGPGLRELAERHPSVGEVR------------------GLGVFWALE 377 (451)
T ss_pred CCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe------------------ccccEEEEE
Confidence 3677777777777776321 122333222 22223455554444 678899998
Q ss_pred e
Q 027424 143 T 143 (223)
Q Consensus 143 ~ 143 (223)
+
T Consensus 378 ~ 378 (451)
T PRK06062 378 L 378 (451)
T ss_pred E
Confidence 8
No 312
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=96.99 E-value=0.01 Score=52.53 Aligned_cols=132 Identities=18% Similarity=0.276 Sum_probs=76.4
Q ss_pred CccccCCEEEEecCCCCCCCcC-----cccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--HhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR-----PLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~-----pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~g 69 (223)
+|+++|++|+||+.++|+++-. .=++ -+||+...+.|.++|- .||...+ +..+..-++... -.+.
T Consensus 218 La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga---~GGyttg-p~~li~llrqr~RpylFS 293 (417)
T KOG1359|consen 218 LAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA---SGGYTTG-PKPLISLLRQRSRPYLFS 293 (417)
T ss_pred HHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC---CCCCccC-ChhHHHHHHhcCCceeec
Confidence 4789999999999999986411 1112 3689999999999976 4887754 545544333221 1344
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCC-eeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~-v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
.++.|.-.-.....++-+ ..-+.+...|.+.+.++.+.... |..-. | .+.++.+++
T Consensus 294 nslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGftIsg~~------h--------------PI~pv~lGd 353 (417)
T KOG1359|consen 294 NSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGFTISGAS------H--------------PICPVMLGD 353 (417)
T ss_pred CCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCceecCCC------C--------------Cccceeccc
Confidence 556663222222333322 12235556677777777776532 11111 2 234455677
Q ss_pred HHHHHHHHhhc
Q 027424 146 LALSKHVVETT 156 (223)
Q Consensus 146 ~~~~~~f~~~l 156 (223)
.+.+.++-|.+
T Consensus 354 a~lA~~~ad~l 364 (417)
T KOG1359|consen 354 ARLASKMADEL 364 (417)
T ss_pred HHHHHHHHHHH
Confidence 77777776553
No 313
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=96.98 E-value=0.007 Score=56.38 Aligned_cols=119 Identities=16% Similarity=0.228 Sum_probs=66.9
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+... .+. +.-...-.|++ ++.|.++| + .-.|+++++ +++.+.+...........+
T Consensus 236 lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~--t~gK~l~~-G-~p~gav~~~-~~i~~~~~~~~~~~T~~~~ 309 (445)
T PRK08593 236 FCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLM--SFGKSLAG-G-MPMSAIVGR-KEIMESLEAPAHLFTTGAN 309 (445)
T ss_pred HHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEe--eecccccC-C-cccEEEEEc-HHHHhhhccCCCCCCCCCC
Confidence 4789999999999963 221 11111225766 68999985 3 334556554 4565544311111222356
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
|..+...+..|+.+.. .+++..+....+.+.|+ ++|.|..|. |.|.|+.+++
T Consensus 310 pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr------------------G~Gl~~gi~l 367 (445)
T PRK08593 310 PVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVR------------------GYGLSIGIDI 367 (445)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEe------------------ccceEEEEEE
Confidence 7777666677766532 22344444444444443 466555544 6788888887
No 314
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=96.93 E-value=0.0028 Score=55.35 Aligned_cols=110 Identities=21% Similarity=0.220 Sum_probs=76.5
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH---------HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~---------~~~g~ 70 (223)
|||++|+|+++..++..+ ...+..+.|||.+|-|-||.+. +..-.|++.. .+++.+.+.... .++|+
T Consensus 181 ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmA--As~PiGvl~~-~eE~ae~V~r~Sg~~~~~KEvellGC 257 (382)
T COG1103 181 ICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMA--ASAPIGVLAM-SEEWAEIVLRRSGRAFPKKEVELLGC 257 (382)
T ss_pred HHHHcCCceEeecceeeccccccccccCCCEEEecCccchh--ccCCeeEEee-hhHHHHHHHhhcccccccceeeeecc
Confidence 589999999999998654 3356678899999999999987 3344687754 456655432211 24676
Q ss_pred CCChHhHHHHHhcHHHHHHHH---HHHHhHHHHHHHHHhcCCCeeE
Q 027424 71 GLAPFDCWICLRGVKTMALRV---EKQQDNAQKIAEFLASHPRVKK 113 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl~~R~---~~~~~na~~la~~L~~~p~v~~ 113 (223)
+.-..-..-+|.++.....|+ .+-.++|+.+++-|++..+|.+
T Consensus 258 T~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~q 303 (382)
T COG1103 258 TVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQ 303 (382)
T ss_pred cccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 543323556888888877665 5667888888888887665433
No 315
>PRK07482 hypothetical protein; Provisional
Probab=96.90 E-value=0.033 Score=52.13 Aligned_cols=121 Identities=17% Similarity=0.189 Sum_probs=67.5
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-----HhcC
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-----NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-----~~~g 69 (223)
+|+++|+++|+|+.... .+.+.-...-+||++ +.|-++|.---+++++ ++ +++.+.+.... -..+
T Consensus 249 lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi~av~-~~-~~i~~~~~~~~~~~~~~~h~ 324 (461)
T PRK07482 249 VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAYAPLSGSI-VG-EKVWDVLEQGSDEHGAIGHG 324 (461)
T ss_pred HHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCccccceee-ec-HHHHHHHhcccccCCccccC
Confidence 58999999999998521 112222222369998 5899986312355544 44 45544433100 0122
Q ss_pred C--CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 70 S--GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 70 ~--~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
. .-+|..|...+..|+-+... .++..+....+.+.| ++||.|..|. |.|.|+.+
T Consensus 325 ~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr------------------G~Glm~gi 386 (461)
T PRK07482 325 WTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVR------------------GVGMLAAV 386 (461)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe------------------eceeEEEE
Confidence 2 23677777777777765321 133333333333333 4566655544 68999999
Q ss_pred Ee
Q 027424 142 LT 143 (223)
Q Consensus 142 ~~ 143 (223)
++
T Consensus 387 el 388 (461)
T PRK07482 387 EF 388 (461)
T ss_pred Ee
Confidence 98
No 316
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=96.89 E-value=0.01 Score=54.99 Aligned_cols=174 Identities=11% Similarity=0.136 Sum_probs=90.4
Q ss_pred CccccCCEEEEecCCCCCCCcCc----c-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p----l-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|+... .+.... . .+|...-+.+++|.++| +--+ |+++++ +++.+.+...........+|.
T Consensus 227 l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~tlsK~l~~-G~pi-gav~~~-~~i~~~~~~~~~~~T~~~~pl 302 (425)
T PRK07495 227 LCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTTMAKGLAG-GFPL-AAVTGR-AEIMDAPGPGGLGGTYGGNPL 302 (425)
T ss_pred HHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEeehhhhcC-Cccc-eEEEEc-HHHHhccCCCCcCCCCCCCHH
Confidence 4789999999999963 332111 1 12433335788999985 4444 445454 455544322111111234777
Q ss_pred hHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH---
Q 027424 76 DCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--- 146 (223)
Q Consensus 76 da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--- 146 (223)
.+...+..++.+.. -.++..+....+.+.|+ .+|.|..|+ |.|-|+.+++.+.
T Consensus 303 ~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr------------------G~Gl~~~iel~~~~~~ 364 (425)
T PRK07495 303 GIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIR------------------GPGFMNAVEFNDADSG 364 (425)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeee------------------cCceEEEEEEecCCCC
Confidence 77766666666532 12333333333433333 345444443 5688888988321
Q ss_pred ----HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHH
Q 027424 147 ----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKAL 218 (223)
Q Consensus 147 ----~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al 218 (223)
+.+.++.+.+. ..|.-+. + .|...+.|||. |.-|+.+++++-|+++|
T Consensus 365 ~~~~~~~~~~~~~~~--~~Gvl~~--------~---------------~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l 419 (425)
T PRK07495 365 LPSAEFANRVRLKAL--EKGLILL--------T---------------CGVHGNVIRFLAPITIQDDVFAEALDILEASI 419 (425)
T ss_pred CccHHHHHHHHHHHH--HCCeEEe--------e---------------cCCCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 12233332211 1111000 0 01112456666 77788888999999998
Q ss_pred hcC
Q 027424 219 RTG 221 (223)
Q Consensus 219 ~~~ 221 (223)
+..
T Consensus 420 ~~~ 422 (425)
T PRK07495 420 LEA 422 (425)
T ss_pred HHH
Confidence 753
No 317
>PRK07036 hypothetical protein; Provisional
Probab=96.88 E-value=0.017 Score=54.20 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=66.1
Q ss_pred CccccCCEEEEecCCCCC------CCcC-cccCCCcEEEecccccccCCcc-cceeEEEecChhHHHHHHHH---H--Hh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSR-PLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL---Q--NA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~-pl~~GADivv~S~tK~l~G~~d-~~~G~v~~~~~~~~~~l~~~---~--~~ 67 (223)
+|+++|+++|+|+..... +... -+..-.||++ +.|.++| +- -+++ ++.+ +++.+.+... . -.
T Consensus 249 lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~g-G~~Pi~a-v~~~-~~i~~~~~~~~~~~~~~~ 323 (466)
T PRK07036 249 ICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTS-GYQPLGA-VIIS-ERLLDVISGPNAKGNVFT 323 (466)
T ss_pred HHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--Ecccccc-CccccEE-EEEc-HHHHHHHhcccCcCcccc
Confidence 589999999999986211 1111 1122368875 4799986 32 3454 5454 4565544311 0 01
Q ss_pred cCC--CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh---cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEE
Q 027424 68 EGS--GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 140 (223)
Q Consensus 68 ~g~--~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~---~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~s 140 (223)
.|. .-+|..+...+..|+.+... +++..+....+.+.|+ +||.|..| +|.|.|+.
T Consensus 324 ~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v------------------rG~Gl~~~ 385 (466)
T PRK07036 324 HGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDV------------------RGDHLMAC 385 (466)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEE------------------EeeceEEE
Confidence 121 23677777777777776421 2333344444444443 34433333 47899999
Q ss_pred EEe
Q 027424 141 FLT 143 (223)
Q Consensus 141 f~~ 143 (223)
+++
T Consensus 386 ve~ 388 (466)
T PRK07036 386 VEC 388 (466)
T ss_pred EEE
Confidence 998
No 318
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=96.84 E-value=0.025 Score=57.60 Aligned_cols=51 Identities=41% Similarity=0.515 Sum_probs=38.0
Q ss_pred CccccCCEEEE--ecCCCCCCCcCcccCCCcEEEecccccc-----cCCcccceeEEEecCh
Q 027424 1 MAHAHGALLLV--DNSIMSPVLSRPLELGADIVMHSATKFI-----AGHSDVMAGVLAVKGE 55 (223)
Q Consensus 1 ia~~~g~~lvV--DnT~~s~~~~~pl~~GADivv~S~tK~l-----~G~~d~~~G~v~~~~~ 55 (223)
+||++|++++| |..-..+ ...|=++||||++-|.+|+. +|+. +|.+.++++
T Consensus 258 ~ah~~GaL~iVaad~lal~~-l~~pge~GADi~vgsgqKwg~P~G~GGP~---aGflavr~~ 315 (993)
T PLN02414 258 NAHANGVKVVMATDLLALTM-LKPPGEWGADIVVGSAQRFGVPMGYGGPH---AAFLATSQE 315 (993)
T ss_pred HHHHcCCEEEEEECHHHhcC-CCCHhhccCcEEEECCCccccCCCCCCCC---eeEEEECHH
Confidence 47999999999 4332222 23577899999999999998 6664 688887753
No 319
>PRK06149 hypothetical protein; Provisional
Probab=96.81 E-value=0.014 Score=59.57 Aligned_cols=118 Identities=23% Similarity=0.354 Sum_probs=66.9
Q ss_pred CccccCCEEEEecCCCC----CCCcCccc-CC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh-cCCCC
Q 027424 1 MAHAHGALLLVDNSIMS----PVLSRPLE-LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~~~~~pl~-~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~-~g~~~ 72 (223)
+|+++|+++|+|+...+ +-.+...+ +| .||+ .+.|.++|. --+ |++++++ ++.+.+...... .+...
T Consensus 773 lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~G-~Pl-~av~~~~-~i~~~~~~~~~~~sT~~g 847 (972)
T PRK06149 773 AVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGNG-HPL-GAVITRR-EIAEALEAEGYFFSSTGG 847 (972)
T ss_pred HHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccCC-eee-EEEEEcH-HHHhhhccCCcccCCCCC
Confidence 47899999999998621 10011112 23 6888 668999863 334 5565554 565544310001 11235
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh--------cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA--------SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~--------~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+|..|...+..|+.+.. ++..+|+..+-++|+ +||.|..| +|.|-|+.+++
T Consensus 848 nP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~~gvel 906 (972)
T PRK06149 848 SPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLEALADRHPLIGAV------------------HGMGLYLGVEL 906 (972)
T ss_pred CHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eecceEEEEEE
Confidence 78777777777776542 234455544444332 35544443 47899999998
No 320
>PLN02368 alanine transaminase
Probab=96.81 E-value=0.026 Score=52.03 Aligned_cols=115 Identities=12% Similarity=0.044 Sum_probs=65.3
Q ss_pred CccccCCEEEEecCCCCCCC-----cCc-c----cCC-------CcEEEecccccc-cCCcccceeEEEe-cChhHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRP-L----ELG-------ADIVMHSATKFI-AGHSDVMAGVLAV-KGERLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~p-l----~~G-------ADivv~S~tK~l-~G~~d~~~G~v~~-~~~~~~~~l 61 (223)
+|+++|++||+|+++.--.+ +.+ + +++ -=|+++|+||.+ +-.|-.+|.++.. .++++.+++
T Consensus 238 ~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~ 317 (407)
T PLN02368 238 FCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEI 317 (407)
T ss_pred HHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHH
Confidence 37889999999999744221 111 1 111 128889999998 4467777765532 355666666
Q ss_pred HHHHHhcCCCCChHhHHHHHhcHH----------HH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 62 YFLQNAEGSGLAPFDCWICLRGVK----------TM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 62 ~~~~~~~g~~~sp~da~ll~~~l~----------tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
........ +.+...-+.+...++ .+ ....+...++...+.+.|++.|++ .+..|
T Consensus 318 ~~~~~~~~-~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~-~~~~P 385 (407)
T PLN02368 318 YKVASIAL-SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNV-VCNFT 385 (407)
T ss_pred HHHhcccC-CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe-EeCCC
Confidence 55432222 233322233333332 11 122355566777888999998875 34445
No 321
>PRK06917 hypothetical protein; Provisional
Probab=96.80 E-value=0.042 Score=51.21 Aligned_cols=120 Identities=14% Similarity=0.175 Sum_probs=66.1
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-H-hcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N-AEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~-~~g~~ 71 (223)
+|+++|+++|+|+... ++ .+.-+..-.||++ +.|.++| +-.-.|+++++ +++.+.+.... . ..+.+
T Consensus 229 lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~--~gK~l~~-G~~Pi~a~~~~-~~i~~~~~~~~~~~~~~~T 303 (447)
T PRK06917 229 ICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMT--LGKGLGA-GYTPIAATVVS-DRVMEPILRGSRSIMSGHT 303 (447)
T ss_pred HHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEE--eeehhcc-CCcceEEEEEc-HHHHHHHhccCcccccccC
Confidence 4889999999999863 22 1111222368865 5899986 32123445454 45555443110 0 12222
Q ss_pred --CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 72 --LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 72 --~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
-+|..+...+..|+.+.. .+++..+....+.+-|+ ++|.|..| +|.|.|+.+++
T Consensus 304 ~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~~~ie~ 365 (447)
T PRK06917 304 LSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDV------------------RGKGLLIGVEF 365 (447)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEE------------------eecceEEEEEE
Confidence 367777777777776632 12333333344444333 35544444 46899999998
No 322
>PRK08637 hypothetical protein; Provisional
Probab=96.79 E-value=0.057 Score=48.96 Aligned_cols=58 Identities=12% Similarity=0.062 Sum_probs=34.9
Q ss_pred cCCEEEEecCCCCCCC----cCc-ccC--CC--cE-E--EecccccccCCcccceeEEEe----cChhHHHHHH
Q 027424 5 HGALLLVDNSIMSPVL----SRP-LEL--GA--DI-V--MHSATKFIAGHSDVMAGVLAV----KGERLAKELY 62 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~----~~p-l~~--GA--Di-v--v~S~tK~l~G~~d~~~G~v~~----~~~~~~~~l~ 62 (223)
+++++|+|+.+.--.. ..+ +.. +. .+ + +.|++|.++..|..+|.+++. .++++.+.+.
T Consensus 183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~ 256 (388)
T PRK08637 183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALE 256 (388)
T ss_pred CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHH
Confidence 8999999998742211 111 111 11 22 3 359999988888888876643 2355555543
No 323
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.78 E-value=0.017 Score=54.03 Aligned_cols=120 Identities=15% Similarity=0.186 Sum_probs=65.6
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH----H-Hhc
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----Q-NAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~----~-~~~ 68 (223)
+|+++|+++|+|+.. |++ .+.-...-.||++ +.|-++|.-.-+++ ++.+ +++.+.+..- . ...
T Consensus 253 lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi~a-v~~~-~ei~~~~~~~~~~~~~~~~ 327 (460)
T PRK06916 253 LCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMT--AGKGLTGGYLPIAI-TVTT-DEIYNAFYGDYEEQKTFFH 327 (460)
T ss_pred HHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeee--eehhhhcCccccce-eeec-HHHHHHhhccccccCcccc
Confidence 489999999999985 332 1111222369886 58998863123444 5444 4554433210 0 012
Q ss_pred CCC--CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 69 GSG--LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 69 g~~--~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
+.+ -+|..+...+..|+.+.. ..++..+....+.+.|+. +|.|.. .+|.|.|+.+
T Consensus 328 ~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~------------------vrG~Glm~gi 389 (460)
T PRK06916 328 GHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGD------------------IRQLGLMVGI 389 (460)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEE------------------eecCCceeeE
Confidence 222 367777777777766532 124444444444444443 333322 3578999999
Q ss_pred Ee
Q 027424 142 LT 143 (223)
Q Consensus 142 ~~ 143 (223)
++
T Consensus 390 el 391 (460)
T PRK06916 390 EL 391 (460)
T ss_pred Ee
Confidence 88
No 324
>PRK07481 hypothetical protein; Provisional
Probab=96.76 E-value=0.025 Score=52.73 Aligned_cols=121 Identities=21% Similarity=0.222 Sum_probs=64.9
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-----HhcC
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-----NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-----~~~g 69 (223)
+|+++|+++|+|+.... + +.+.-...-.||++- .|.++|.-.-+++ ++++ +++.+.+.... -..+
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~a-v~~~-~~i~~~~~~~~~~~~~~~h~ 317 (449)
T PRK07481 242 VCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITSGYVPLGA-TMVN-ARIADAFEANADFGGAIMHG 317 (449)
T ss_pred HHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccCCCcCceE-EEEc-HHHHHHHhccCccccccccC
Confidence 48999999999998521 1 112222223688876 7999862123444 5454 45555443210 0122
Q ss_pred CC--CChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 70 SG--LAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
.+ -+|..+...+..|+.+... +++..+....+.+.|+ ++|.|..| +|.|.|+.+
T Consensus 318 ~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Glm~gi 379 (449)
T PRK07481 318 YTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDV------------------RGKGLMLAL 379 (449)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEE------------------eecceEEEE
Confidence 22 2676666666666655321 2333333334433333 24544443 468999999
Q ss_pred Ee
Q 027424 142 LT 143 (223)
Q Consensus 142 ~~ 143 (223)
++
T Consensus 380 ~l 381 (449)
T PRK07481 380 DL 381 (449)
T ss_pred Ee
Confidence 98
No 325
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.76 E-value=0.024 Score=53.14 Aligned_cols=119 Identities=17% Similarity=0.263 Sum_probs=65.2
Q ss_pred CccccCCEEEEecCCC----CC--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-----HHhcC
Q 027424 1 MAHAHGALLLVDNSIM----SP--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-----QNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~----s~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-----~~~~g 69 (223)
+|+++|+++|+|+... ++ +.+.-...-.||++- .|.++|.---+++ ++.+ +++.+.+..- .-..+
T Consensus 244 lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~a-v~~~-~ei~~~~~~~~~~~~~~~h~ 319 (466)
T PRK07030 244 ACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCL--SKALTGGYLPLAA-VLTT-DTVYQAFYDDYPTLRAFLHS 319 (466)
T ss_pred HHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEee--ehhccCCcccceE-EEec-HHHHHHHhcccccccccccC
Confidence 4899999999999842 11 112222223699886 7999862123444 5454 4555443210 00122
Q ss_pred CC--CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh-------cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEE
Q 027424 70 SG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA-------SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 140 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~-------~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~s 140 (223)
.+ -+|..|...+..|+.+.. ++..+|+.++.++|. ++|.|..| +|.|.|+.
T Consensus 320 ~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~v~~v------------------rG~Gl~~g 379 (466)
T PRK07030 320 HSYTGNPLACAAALATLDIFEQ--DNVIENNRALARRMAEATAHLADHPHVAEV------------------RQTGMILA 379 (466)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhcCCCEEEe------------------EeceeEEE
Confidence 22 367777777777766532 123334443333332 34444333 46899999
Q ss_pred EEe
Q 027424 141 FLT 143 (223)
Q Consensus 141 f~~ 143 (223)
+++
T Consensus 380 ie~ 382 (466)
T PRK07030 380 IEM 382 (466)
T ss_pred EEe
Confidence 998
No 326
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.76 E-value=0.014 Score=54.33 Aligned_cols=100 Identities=11% Similarity=0.093 Sum_probs=56.1
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~~~g~~-- 71 (223)
+|++||+++|+|+.+ +++- +.-...-.||++ +.|.++|. .-+|+++++ +++.+.+... ....+.+
T Consensus 230 lc~~~g~llI~DEv~-tG~R~G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~-~~i~~~~~~~~~~~~~~T~~ 303 (433)
T PRK00615 230 TCRRTGSLSIMDEVV-TGFRVAQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAH-KSIMDHLAPEGTIFQAGTLS 303 (433)
T ss_pred HHHHcCCEEEEEccc-ccccccHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeec-HHHHhhhcCCCCcccCCCCc
Confidence 488999999999997 3331 111112368876 79999853 335666554 4565544211 1112222
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~ 106 (223)
.+|..+...+..|+.+.. .+++..++...+.+.|+
T Consensus 304 g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 304 GNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIE 340 (433)
T ss_pred ccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 377777777777776631 23444444555544333
No 327
>PRK12403 putative aminotransferase; Provisional
Probab=96.69 E-value=0.017 Score=54.00 Aligned_cols=120 Identities=22% Similarity=0.284 Sum_probs=71.0
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g~~ 71 (223)
+|+++|+++|+|+..+ ++ .+.-...-.||++ +.|.++|.---+|+++ ++ +++.+.+..... ..+.+
T Consensus 251 lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Piga~v-~~-~~i~~~~~~~~~~~~~~~T 325 (460)
T PRK12403 251 ICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPMGGLV-LS-KRIAEALVEQGGVFAHGLT 325 (460)
T ss_pred HHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEE--EcccccccccceEEEE-EC-HHHHHHHhcCCCccccCCC
Confidence 5899999999999973 32 1121222259997 8999996312455555 54 455544421100 12222
Q ss_pred --CChHhHHHHHhcHHHHHHH--HHHHH-hHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 72 --LAPFDCWICLRGVKTMALR--VEKQQ-DNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 72 --~sp~da~ll~~~l~tl~~R--~~~~~-~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.+|..|...+..|+.+... +++.. ++...+.+.|+ ++|.|..|. |.|.|+.++
T Consensus 326 ~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vr------------------G~Gl~~gie 387 (460)
T PRK12403 326 YSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQ------------------GAGLVAALQ 387 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEe------------------ecceEEEEE
Confidence 5787787777888776422 23442 44555555443 456555544 689999999
Q ss_pred e
Q 027424 143 T 143 (223)
Q Consensus 143 ~ 143 (223)
+
T Consensus 388 ~ 388 (460)
T PRK12403 388 F 388 (460)
T ss_pred E
Confidence 8
No 328
>PLN03032 serine decarboxylase; Provisional
Probab=96.62 E-value=0.035 Score=50.74 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=70.3
Q ss_pred CccccC-----CEEEEecCCCCCCCc-----C--cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH---
Q 027424 1 MAHAHG-----ALLLVDNSIMSPVLS-----R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--- 65 (223)
Q Consensus 1 ia~~~g-----~~lvVDnT~~s~~~~-----~--pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--- 65 (223)
+|+++| +++-||.+++.+... . .+..++|-+.-|.||+++.+ .-.|++..+++. .+.+....
T Consensus 186 i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P--~g~G~ll~r~~~-~~~~~~~~~Yl 262 (374)
T PLN03032 186 ILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCP--MPCGVALTRKKH-VKALSQNVEYL 262 (374)
T ss_pred HHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCC--cCeEEEEEEchh-hHhhccCCccc
Confidence 356675 589999998764321 0 12347999999999998744 235777777543 23221111
Q ss_pred -----HhcCCC--CChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 66 -----NAEGSG--LAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 66 -----~~~g~~--~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
...|.- ..+.-.|..++ |.+.+..++++..++|..+++.|++++ +..+.-|
T Consensus 263 ~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p 322 (374)
T PLN03032 263 NSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNE 322 (374)
T ss_pred CCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECC
Confidence 111211 12344555444 555678899999999999999999864 3444444
No 329
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=96.58 E-value=0.012 Score=54.31 Aligned_cols=51 Identities=25% Similarity=0.244 Sum_probs=41.3
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 54 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~ 54 (223)
+|++.|+.+.+|.|.+-+. ..+.-+++||.+..|+||.++-.+ .|++-+++
T Consensus 206 icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 206 ICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred HhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 5789999999999987653 345556899999999999999665 56777775
No 330
>PRK08297 L-lysine aminotransferase; Provisional
Probab=96.54 E-value=0.027 Score=52.43 Aligned_cols=165 Identities=22% Similarity=0.255 Sum_probs=86.8
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH-H--HHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-L--QNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-~--~~~~g~ 70 (223)
+|+++|+++|+|+... ++. +.-+..-.||++ +.|.++ ++|++. ++ ++.+.... . ....+.
T Consensus 254 lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~-~~-~i~~~~~~~~~~~~~~~~ 323 (443)
T PRK08297 254 LCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMA-GR-RVDEVEDNVFAVSSRINS 323 (443)
T ss_pred HHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEEE--eccccc-----ccceec-ch-HHHHhhhhhccCccccCC
Confidence 4899999999999963 221 111122369887 688874 456553 33 33221111 1 011222
Q ss_pred C--CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCee-EEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 71 G--LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVK-KVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 71 ~--~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~-~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
+ -+|..+...+..|+.+.. .+++..+....+.+.|+ ++|.+. . .+|.|.|+.|
T Consensus 324 T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~------------------vrg~G~~~~i 385 (443)
T PRK08297 324 TWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSN------------------VRGRGLMCAF 385 (443)
T ss_pred CCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCccee------------------eeccceEEEE
Confidence 2 367676666666665532 12333444444444343 244321 2 2467999999
Q ss_pred EeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHH
Q 027424 142 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKA 217 (223)
Q Consensus 142 ~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~A 217 (223)
++.+.+...+|...+. ..|.-+ .|. ....+||+.. -|+.+.+++-|+++
T Consensus 386 ~~~~~~~~~~~~~~l~--~~Gvl~--------~~~-----------------~~~~lr~~P~l~~t~~eid~~l~~l~~~ 438 (443)
T PRK08297 386 DLPTTADRDEVIRRLW--EEGVLV--------LPC-----------------GERSIRFRPALTVTTEEIDAAIDALRRA 438 (443)
T ss_pred EecCHHHHHHHHHHHH--HCCEEE--------ecC-----------------CCCeEEEECCccCCHHHHHHHHHHHHHH
Confidence 9965555556655432 122111 110 1234777433 35678888888888
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
|+.
T Consensus 439 l~~ 441 (443)
T PRK08297 439 LPE 441 (443)
T ss_pred HHh
Confidence 764
No 331
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=96.49 E-value=0.012 Score=54.81 Aligned_cols=104 Identities=19% Similarity=0.099 Sum_probs=70.9
Q ss_pred CccccCCEEEEecC--C-CC--------CCCcCccc-------CCCcEEEecccccccCCcccceeEEEecCh---hHHH
Q 027424 1 MAHAHGALLLVDNS--I-MS--------PVLSRPLE-------LGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAK 59 (223)
Q Consensus 1 ia~~~g~~lvVDnT--~-~s--------~~~~~pl~-------~GADivv~S~tK~l~G~~d~~~G~v~~~~~---~~~~ 59 (223)
+|+++|+++.+|.+ | .+ .+.-.+++ .++|.|..|++|-++.+ +||+++.+++ ++.+
T Consensus 212 la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vGg~Lag~d~~~~~l~~ 288 (467)
T TIGR02617 212 IAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCFKDDSFFDVYT 288 (467)
T ss_pred HHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---ccceEEecchhHHHHHH
Confidence 58999999999976 1 11 11112211 57999999999999866 7999988888 5555
Q ss_pred HHHHHH------HhcCCCCChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcC
Q 027424 60 ELYFLQ------NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 60 ~l~~~~------~~~g~~~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~ 108 (223)
+++... ..+| .++-.|-..+..||+.. ...++...+..+.|++.|++.
T Consensus 289 ~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 289 ECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred HHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 544321 1233 57888888888888863 344455556667888888765
No 332
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.48 E-value=0.027 Score=52.10 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=56.3
Q ss_pred CccccCCEEEEecCCCCC---CC--cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HHhcCC--CC
Q 027424 1 MAHAHGALLLVDNSIMSP---VL--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAEGS--GL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~---~~--~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~~~g~--~~ 72 (223)
+|+++|+++|+|+..... +. +.-...-.||+ .+.|-++| +--+++ ++++ +++.+.+... ....+. .-
T Consensus 229 lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDiv--t~gK~lgg-G~Pi~a-v~~~-~~i~~~~~~~~~~~~~~T~~g 303 (428)
T PRK12389 229 LAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLT--ALGKIIGG-GLPIGA-YGGR-KDIMEQVAPLGPAYQAGTMAG 303 (428)
T ss_pred HHHHcCCEEEEEccccccccCcchhhHHhCCCCCee--eechhhcC-CCceeE-EeEH-HHHHhhhccCCCcccccCCcc
Confidence 488999999999986321 11 11112236876 66899986 344555 4454 4565544210 001221 24
Q ss_pred ChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh
Q 027424 73 APFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~ 106 (223)
+|..+...+..|+.+.. ..++..+....+.+.|+
T Consensus 304 npl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~ 339 (428)
T PRK12389 304 NPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGIL 339 (428)
T ss_pred CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 77777777777777642 23444445555555444
No 333
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=96.46 E-value=0.021 Score=53.19 Aligned_cols=121 Identities=19% Similarity=0.252 Sum_probs=74.0
Q ss_pred CccccCCEEEEecCCC------CCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HH--hcCC-
Q 027424 1 MAHAHGALLLVDNSIM------SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN--AEGS- 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~------s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~--~~g~- 70 (223)
||++||+++|+|+-.. +.+.+.-..--.||++ +.|-++|.-.-++++++ + +++.+.+..- .. ..|.
T Consensus 244 iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~Pl~a~l~-~-~~I~~~~~~~~~~~f~HG~T 319 (449)
T COG0161 244 ICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYLPLSAVLT-S-DRIYEAFSDGDAGAFMHGHT 319 (449)
T ss_pred HHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccchhhHhHhh-h-HHHHHHHhcccCCeeccCCc
Confidence 5899999999999852 2222222112247776 56999987777777664 3 4565554432 10 1122
Q ss_pred -CCChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 71 -GLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 71 -~~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+-.|..|...+.+|+-++.. +++..+....+.+.|+ .||.|..|+ |-|-|..+|+
T Consensus 320 YsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR------------------~~Gli~~iEl 381 (449)
T COG0161 320 YSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVR------------------GLGLIGAIEL 381 (449)
T ss_pred cccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEee------------------ccceEEEEEE
Confidence 23788898888888887522 2444444444544444 567777766 4677777887
No 334
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.39 E-value=0.044 Score=51.28 Aligned_cols=115 Identities=22% Similarity=0.292 Sum_probs=63.6
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~ 72 (223)
+|+++|+++|+|+.... + +.+.-...-.||++- .|.++| +--++ +++.++ ++ +.+.. ...+.+ -
T Consensus 254 lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~--gK~l~g-G~Pi~-av~~~~-~~-~~~~~--~~~~~T~~g 325 (459)
T PRK06931 254 VTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVM--SKAVGG-GLPLA-VLGIKK-EF-DAWQP--GGHTGTFRG 325 (459)
T ss_pred HHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEe--cccccC-Cccee-eeeeHH-HH-hhccC--CCCCCCCCC
Confidence 48999999999998421 1 122222233688876 799987 34454 454443 33 32211 112222 3
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHH--------hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFL--------ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L--------~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+|..+...+..|+.+.. +...+++..+.++| ++||.|..| +|.|.|+.+++
T Consensus 326 npla~aaala~L~~l~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v------------------rG~Glm~giel 384 (459)
T PRK06931 326 NQLAMATGLTTLKILKE--ENLAQNAAERGEWLKAQLAELQKRYPCIGNV------------------RGRGLMIGIEI 384 (459)
T ss_pred CHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEeE------------------ecCceEEEEEE
Confidence 67777766666666532 12233333333333 345655444 46899999998
No 335
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=96.39 E-value=0.04 Score=50.11 Aligned_cols=113 Identities=18% Similarity=0.221 Sum_probs=63.6
Q ss_pred CccccCCEEEEecCCC-----CCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--CCC
Q 027424 1 MAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--GLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~-----s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~~s 73 (223)
+|+++|+++|+|+... +.+.+.-...-.||++- .|.++| +--+++ ++.+.+ +.. ...+. .-+
T Consensus 191 lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~--gK~lgg-G~P~~a-~~~~~~-~~~------~~~~~T~~gn 259 (364)
T PRK04013 191 LTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTM--GKGIGN-GVPVSL-TLTNFD-VER------GKHGSTFGGN 259 (364)
T ss_pred HHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEe--cccccC-CceeEE-EEeccc-ccC------CCcCCCCCcC
Confidence 4899999999999853 22222223344687776 899997 444555 445443 311 01121 246
Q ss_pred hHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 74 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
|..+...+..|+.+... ...+|+.++-+.++ +|.|.. .+|.|.|+.+++.+
T Consensus 260 p~~~aaa~a~l~~i~~~--~l~~~~~~~l~~l~-~~~v~~------------------vRG~Gl~~gve~~~ 310 (364)
T PRK04013 260 PLACKAVAVTLRILRRE--RLVEKAGEKFIEIK-GERVVT------------------TRGRGLMIGIVLKK 310 (364)
T ss_pred HHHHHHHHHHHHHHHhc--cHHHHHHHHHHHhc-cCccee------------------eeeCcEEEEEEeCC
Confidence 77777777777766432 23334433322221 233322 35789999999943
No 336
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=96.27 E-value=0.0076 Score=54.92 Aligned_cols=115 Identities=23% Similarity=0.288 Sum_probs=74.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccC---CCcEEEecccccccCCcccceeEEEecChhHHHH-H----HHHHH--
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-L----YFLQN-- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~---GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~-l----~~~~~-- 66 (223)
+|+++++++=||.+||...+ .+++.. +||=+.-+.||++.-+ -.+|++..+++..... + .++.+
T Consensus 219 i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P--~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 219 ICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVP--YGCGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp HHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-S--SS-EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred hccccceeeeecccccccccccccccccccccccccccccchhhhhcCC--ccceeEEeecccchHHHhccChhhhcccc
Confidence 47889999999999988433 222222 6899999999999844 4577787777653221 1 00000
Q ss_pred ----------hcCCCCC----hHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 67 ----------AEGSGLA----PFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 67 ----------~~g~~~s----p~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
..+...| +.-.|+.++ |.+-+..++++..++|+.++++|+++|.++-|.-|
T Consensus 297 ~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~ 363 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP 363 (373)
T ss_dssp SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT
T ss_pred cccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 0111112 245666555 66668999999999999999999999986554434
No 337
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=96.19 E-value=0.34 Score=43.30 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=64.7
Q ss_pred CccccCCEEEEecCC---CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSI---MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-------------- 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~---~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-------------- 63 (223)
+||+|++.++||..- ++++ .--++|+|++..-.-|.++++.-. +.+ +-++...++++.
T Consensus 168 lc~k~~~lllVD~VaSlggt~F--~mDewgVDvaytgSQKaL~aP~GL--sii-sfS~ka~~~~~~rK~~~~~~yFd~~~ 242 (385)
T KOG2862|consen 168 LCHKHEALLLVDTVASLGGTEF--EMDEWGVDVAYTGSQKALGAPAGL--SII-SFSDKALEAIRDRKTKPVSFYFDILR 242 (385)
T ss_pred HhhcCCeEEEEechhhcCCccc--eehhhcccEEEecchhhcCCCCCc--cee-ecCHHHHHHHhhccCCceEEEEeHHh
Confidence 589999999999763 3444 334789999999999999988422 233 333333233321
Q ss_pred HHHhcCCC---------CChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 64 LQNAEGSG---------LAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 64 ~~~~~g~~---------~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p 109 (223)
+.+..|+. .+-.-.|-|..+|+- ++.++++|.+++..+-..|+++.
T Consensus 243 ~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G 302 (385)
T KOG2862|consen 243 LGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALG 302 (385)
T ss_pred hcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11222321 222223333333333 57889999999999988888864
No 338
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.063 Score=48.15 Aligned_cols=179 Identities=18% Similarity=0.193 Sum_probs=98.8
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecCh--hHHHHH----------HHH---
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--RLAKEL----------YFL--- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~--~~~~~l----------~~~--- 64 (223)
+||++|++++.|=++..+.. ..--..|||.-|-+..||++|.--..+|+-+.... +.+..+ ...
T Consensus 191 ~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y 270 (407)
T COG3844 191 LAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVY 270 (407)
T ss_pred HHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhcc
Confidence 58999999999999977643 33334699999999999999766677775543221 111000 000
Q ss_pred ------HHhcCCCCChHhHHHHHhcHHHHH-HHHHHHH----hHHHHHHHHHhcCCC--eeEEEcCCCCCCcchHHHHhh
Q 027424 65 ------QNAEGSGLAPFDCWICLRGVKTMA-LRVEKQQ----DNAQKIAEFLASHPR--VKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 65 ------~~~~g~~~sp~da~ll~~~l~tl~-~R~~~~~----~na~~la~~L~~~p~--v~~V~yP~l~~~~~~~~~~~~ 131 (223)
.+..-.+.+-.+...+..+|+-+. .-|.+.. .-+..+.+-++.+.. --.+.-| -.|+
T Consensus 271 ~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tP-----r~~~----- 340 (407)
T COG3844 271 APGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTP-----RAHE----- 340 (407)
T ss_pred CcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEecc-----chhh-----
Confidence 111111223344455556666542 1133333 333444444555432 1122222 1121
Q ss_pred hCCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEE-----EEecCCC
Q 027424 132 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR-----ISVGIED 206 (223)
Q Consensus 132 ~~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liR-----lsvGlEd 206 (223)
-.|+=+||......++.+-+..-.++ |+.+ .|+.+| +.++.+|
T Consensus 341 --~rGsqvS~~hp~~~~V~qaLi~rGVi------gD~R------------------------~P~vlRfgftPlY~~~~D 388 (407)
T COG3844 341 --ERGSQVSLYHPHGYQVMQALIDRGVI------GDFR------------------------EPDVLRFGFTPLYVSFVD 388 (407)
T ss_pred --hccceeeEecCcHHHHHHHHHHcCcc------cccc------------------------CCCeeeecCccceechhH
Confidence 25888999986555554444444443 3322 234444 4677889
Q ss_pred HHHHHHHHHHHHhcC
Q 027424 207 VNDLISDLDKALRTG 221 (223)
Q Consensus 207 ~~dL~~dl~~Al~~~ 221 (223)
+=+=.+.|+++|+++
T Consensus 389 Vw~AV~~L~evL~t~ 403 (407)
T COG3844 389 VWDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888888888888764
No 339
>PLN02452 phosphoserine transaminase
Probab=96.10 E-value=0.095 Score=47.69 Aligned_cols=131 Identities=13% Similarity=0.161 Sum_probs=77.2
Q ss_pred CCEEEEecCCCCCCCcCccc---CCCcEEEecccccccCCcccceeEEEecChhHHHHHH-------HHHHh--cC---C
Q 027424 6 GALLLVDNSIMSPVLSRPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-------FLQNA--EG---S 70 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~~pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~-------~~~~~--~g---~ 70 (223)
+++++||.+-. +...|++ +|+|+ .|..|.++ +.- + |+++++++.+ +++. .+... .+ .
T Consensus 170 ~~~lvVDa~Ss--~g~~pidv~~~~v~~--~saqK~lG-P~G-l-~~v~vr~~~l-~~~~~~~~~~~~~~~~~~~~s~~~ 241 (365)
T PLN02452 170 NVPLVADMSSN--FLSKPVDVSKYGVIY--AGAQKNVG-PSG-V-TIVIIRKDLI-GNARPITPGMLDYKIHAENDSLYN 241 (365)
T ss_pred CCeEEEECCcc--ccCcccCHHHcCEEE--EecccccC-CCC-e-EEEEEcHHHH-hhcccCCCchhhHHHHHhcCCccC
Confidence 47999998843 2234443 56544 69999995 432 3 4565665433 2211 11100 01 1
Q ss_pred CCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 71 GLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
+.+-...|.+...|+.+ ..+.++..+.+..+-++|++.+++ +.+.. .|.+ | ....++|.+.
T Consensus 242 TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~---y~~~~--~~~~----r----s~~~vsF~~~ 308 (365)
T PLN02452 242 TPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF---YVCPV--EKSV----R----SLMNVPFTLG 308 (365)
T ss_pred ChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc---ccCCC--ChHH----h----CCeEEEEEcC
Confidence 22225566666677754 456788899999999999988765 22211 1111 1 3568999986
Q ss_pred CHHHHHHHHhhcC
Q 027424 145 SLALSKHVVETTK 157 (223)
Q Consensus 145 ~~~~~~~f~~~l~ 157 (223)
+.+..++|++.++
T Consensus 309 ~~~~~~~f~~~~~ 321 (365)
T PLN02452 309 GSELEAEFVKEAA 321 (365)
T ss_pred CchhHHHHHHHHH
Confidence 6566788887765
No 340
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=96.00 E-value=0.055 Score=54.20 Aligned_cols=121 Identities=16% Similarity=0.190 Sum_probs=71.0
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----~~~g~ 70 (223)
+|+++|+++|+|+.+... +.+.-+..-.||++. .|-++|.=.-+++++ ++ +++.+.+..-. -..|.
T Consensus 614 lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~--gKgLtgG~~Plaa~l-~~-~~I~~~f~~~~~~~~~~hg~ 689 (817)
T PLN02974 614 VCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACY--AKLLTGGLVPLAATL-AT-EEVFEAFRGPSKLDALLHGH 689 (817)
T ss_pred HHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEee--cccccCCCCccEEEE-Ec-HHHHHhhccccccCCcccCC
Confidence 589999999999997322 112222223699885 599986323455544 44 45655442100 01222
Q ss_pred C--CChHhHHHHHhcHHHHHHH--HHHHHhHHHH--------HHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCee
Q 027424 71 G--LAPFDCWICLRGVKTMALR--VEKQQDNAQK--------IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 138 (223)
Q Consensus 71 ~--~sp~da~ll~~~l~tl~~R--~~~~~~na~~--------la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl 138 (223)
+ -.|..|...+..|+.+..- +++..+++.. +.+.|+.||.|..|+ |.|.|
T Consensus 690 Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR------------------g~Gl~ 751 (817)
T PLN02974 690 SYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV------------------SLGTV 751 (817)
T ss_pred CCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE------------------eeeeE
Confidence 2 3677888888888876431 1233333322 324456688887776 57899
Q ss_pred EEEEe
Q 027424 139 LSFLT 143 (223)
Q Consensus 139 ~sf~~ 143 (223)
+++++
T Consensus 752 ~~iel 756 (817)
T PLN02974 752 LALEL 756 (817)
T ss_pred EEEEE
Confidence 99998
No 341
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=95.96 E-value=0.19 Score=46.01 Aligned_cols=115 Identities=13% Similarity=0.040 Sum_probs=75.7
Q ss_pred CccccCCEEEEecCCCCCC-CcC---ccc-CC---CcEEEecccccccCCcccceeEEEecChhHH---HHHHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSR---PLE-LG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLA---KELYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~---pl~-~G---ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~---~~l~~~~~~~g 69 (223)
+|+++|+++|-|+-++--+ .-+ |+. +. .=|.+.|.+|-.-=+|=.+||.++-.+..+. ..+..+.+..+
T Consensus 227 ~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~ 306 (447)
T KOG0259|consen 227 TAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLD 306 (447)
T ss_pred HHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHh
Confidence 3789999999999964211 112 221 11 1378889999866556678876643332221 22345566667
Q ss_pred CCCChHhHHHHHhcHHHH---------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 70 SGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---------~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.+..| +..+..+|.+. ..+..-.-.|+.-.-++|+.-|.+....-|
T Consensus 307 ~~~~p--~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kP 361 (447)
T KOG0259|consen 307 IIPGP--ATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKP 361 (447)
T ss_pred ccCCc--cHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCC
Confidence 67778 77777788774 455677788999999999999976544444
No 342
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=95.86 E-value=0.025 Score=53.17 Aligned_cols=128 Identities=15% Similarity=0.158 Sum_probs=65.2
Q ss_pred CccccCCEEEEecCCCCCCCc-------CcccC--CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl~~--GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|+.. +++.. .-... -.||++- .|-++|. |.++. .+.+.. .. ....+.+
T Consensus 280 lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~g-----G~~~~-~~~~~~-~~--~~~~~~T 347 (464)
T TIGR00699 280 ITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQTA-----GYFFH-DPAFRP-NK--PYRQFNT 347 (464)
T ss_pred HHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCCCEEEe--hhhhccC-----Ccccc-chhccC-CC--CcccccC
Confidence 489999999999996 33321 11111 2788664 8999532 22222 221110 00 0011222
Q ss_pred --CChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh----cCC-CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 72 --LAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA----SHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 72 --~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~----~~p-~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
-+|..+......|+.+... .++..+....+.+.|+ ++| .|..|+. .|.|.|+.++
T Consensus 348 ~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg----------------~G~Glm~gie 411 (464)
T TIGR00699 348 WMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG----------------KGRGTFIAWD 411 (464)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc----------------cCeEEEEEEe
Confidence 2566666666666665321 1222222233333333 355 3444432 2579999999
Q ss_pred eCCHHHHHHHHhhc
Q 027424 143 TGSLALSKHVVETT 156 (223)
Q Consensus 143 ~~~~~~~~~f~~~l 156 (223)
+.+.+.+.+|++.+
T Consensus 412 ~~~~~~~~~i~~~~ 425 (464)
T TIGR00699 412 TPDEAKRDKLLKKA 425 (464)
T ss_pred cCCHHHHHHHHHHH
Confidence 96655556665543
No 343
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=95.82 E-value=0.058 Score=49.55 Aligned_cols=166 Identities=20% Similarity=0.357 Sum_probs=89.4
Q ss_pred CccccCCEEEEecCCCCCC-------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~-- 71 (223)
+|++||+++|+|+-= |++ .+.-...-.||++ +.|-++|. -=+|. ++.+ +.+.+.+. ....|++
T Consensus 213 lCd~~g~LLI~DEVQ-tG~GRTGk~fA~e~~gV~PDI~t--laK~LgGG-~PigA-~la~-~~~~~~~~--~G~HgSTfG 284 (404)
T COG4992 213 LCDEHGALLILDEVQ-TGLGRTGKLFAYEHYGVEPDILT--LAKALGGG-FPIGA-MLAT-EEIASAFT--PGDHGSTFG 284 (404)
T ss_pred HHHHhCeEEEEeccc-cCCCccchHHHHHHhCCCCCEEE--eeccccCC-cccee-eEEc-hhhhhcCC--CCcccCCCC
Confidence 589999999999972 222 1111112247765 68999985 55554 5455 33333221 1222322
Q ss_pred CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHH----HHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 72 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAE----FLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R~~~~~~na~~la~----~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
=+|..|......|+.+.. +...+|+++..+ .|++ +|.|+. .+|-|=|+-+++
T Consensus 285 GNpLacAv~~a~l~~l~~--e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~------------------vRG~GLmiGiel 344 (404)
T COG4992 285 GNPLACAVALAVLEVLLE--EGLLENVREKGEYLLQRLRELKRRYPLVKE------------------VRGRGLMIGIEL 344 (404)
T ss_pred cCHHHHHHHHHHHHHHcc--hhHHHHHHHHHHHHHHHHHHHhhcCCceee------------------eecceeEEEEEe
Confidence 267777777777776531 233333333333 3332 333333 357899999999
Q ss_pred CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHh
Q 027424 144 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDKALR 219 (223)
Q Consensus 144 ~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL~~dl~~Al~ 219 (223)
.....+..+++.+.--. ++..++ .++.|||. |--|+.++.++-|++||+
T Consensus 345 ~~~~~a~~~~~~~~~~g----------vL~~~a-----------------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~ 397 (404)
T COG4992 345 KEPYRARDIVRALREEG----------VLVLPA-----------------GPNVIRFLPPLVITEEEIDEALDALERALA 397 (404)
T ss_pred cCcccHHHHHHHHHHCC----------eEEecC-----------------CCCeEEecCCccCCHHHHHHHHHHHHHHHH
Confidence 54323344443332110 111110 23456654 555788899999999987
Q ss_pred cC
Q 027424 220 TG 221 (223)
Q Consensus 220 ~~ 221 (223)
..
T Consensus 398 ~~ 399 (404)
T COG4992 398 AA 399 (404)
T ss_pred Hh
Confidence 53
No 344
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=95.70 E-value=0.024 Score=50.20 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=77.0
Q ss_pred CccccCCEEEEecC------CCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC-
Q 027424 1 MAHAHGALLLVDNS------IMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA- 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT------~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s- 73 (223)
+|+++|++|=+|.+ .++.+..+-+-.-+|=|--=++|-++.+ +| .|++.+..++++-++.+..+|..+-
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VG-SViVG~k~FI~kA~~~RKalGGGmRQ 258 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VG-SVIVGSKDFIDKARHFRKALGGGMRQ 258 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cc-cEEEccHHHHHHHHHHHHHhcCchhH
Confidence 47899999999976 2334332222234677777789999876 44 4556677888888888888876652
Q ss_pred -hHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCC
Q 027424 74 -PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 120 (223)
Q Consensus 74 -p~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~ 120 (223)
..=|...+-+|+.-...++.--+.|..||+++++-+.+ +|.-|.-+
T Consensus 259 sGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~e 305 (384)
T KOG1368|consen 259 SGVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAVE 305 (384)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchhh
Confidence 22233334445443445677778899999999976655 77777543
No 345
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.70 E-value=0.12 Score=48.64 Aligned_cols=119 Identities=22% Similarity=0.285 Sum_probs=64.5
Q ss_pred CccccCCEEEEecCCC----CC--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH----HHhcCC
Q 027424 1 MAHAHGALLLVDNSIM----SP--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----QNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~----s~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~----~~~~g~ 70 (223)
+|+++|+++|+|+... ++ +.+.-...-.||++- .|.++|.---+++++ .+ +++.+.+... .-..+.
T Consensus 266 lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~gG~~Plaav~-~~-~ei~~~~~~~~~~~~~~h~~ 341 (472)
T PRK08742 266 LCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCL--SKGLTGGFLPLSAVL-AT-QQLYDAFLDDSRERAFLHSH 341 (472)
T ss_pred HHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEE--cccccCCCCCcceee-cc-HHHHHHhhccCccCccCcCC
Confidence 4899999999999842 11 112222223688886 799986312355544 44 4555443210 001232
Q ss_pred C--CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHH-------HhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 71 G--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF-------LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 71 ~--~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~-------L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
+ -+|..|...+..|+-+.. +...+|+.++.++ +++||.|..| +|.|.|+.|
T Consensus 342 T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~~~~~~~~~~i~dv------------------RG~Gl~~gi 401 (472)
T PRK08742 342 SYTGNPLACAAALATLDIFAD--DDVIARNQPTAARMTQLAAQIGEHPHVADV------------------RQAGMVVAF 401 (472)
T ss_pred CCCccHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHhcCCCeeeE------------------eccceEEEE
Confidence 3 267666666666665421 1223333333333 3445544444 468999999
Q ss_pred Ee
Q 027424 142 LT 143 (223)
Q Consensus 142 ~~ 143 (223)
++
T Consensus 402 el 403 (472)
T PRK08742 402 EL 403 (472)
T ss_pred Ee
Confidence 98
No 346
>PRK06148 hypothetical protein; Provisional
Probab=95.70 E-value=0.12 Score=53.00 Aligned_cols=117 Identities=21% Similarity=0.205 Sum_probs=65.8
Q ss_pred CccccCCEEEEecCCC----CC---CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIM----SP---VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~----s~---~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~-- 71 (223)
+|+++|+++|+|+... ++ +.+.-...-.||++. .|.++| |--+|+ ++++ +++.+.+..- ...+.+
T Consensus 813 lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~lgg-G~Plga-v~~~-~ei~~~~~~g-~~~~~Tf~ 886 (1013)
T PRK06148 813 MVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPIGN-GHPMGA-VVTT-REIADSFDNG-MEYFNTFG 886 (1013)
T ss_pred HHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccccC-CcceEE-EEEc-HHHHhhccCC-CccccCCC
Confidence 4799999999999852 11 112212223688775 899986 344555 5454 4565543210 001122
Q ss_pred CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh--------cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 72 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA--------SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~--------~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
-+|..|...+..|+.+.. +...+|+.++.++|+ +||.|..| +|.|.|+.+++
T Consensus 887 gnpla~aaa~a~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V------------------rG~Gl~~gvel 946 (1013)
T PRK06148 887 GNPVSCAIGLAVLDIIED--EDLQRNALEIGNYLLAGLRELQDRFDIIGDV------------------RGMGLFLGIEL 946 (1013)
T ss_pred CCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEE------------------eeeceEEEEEe
Confidence 367777777677766532 233344444444433 34544443 47899999998
No 347
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=95.63 E-value=0.36 Score=42.26 Aligned_cols=168 Identities=17% Similarity=0.203 Sum_probs=87.9
Q ss_pred cCCEEEEecCCCCCCC-cCccc----CCCcEEEecccccccCCcccceeEEEe---cChhHHHHHHHHHHhcCCCCChHh
Q 027424 5 HGALLLVDNSIMSPVL-SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAV---KGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~-~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~---~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
-+.+||||+++--... -+.+. +--=+|++.++|.++- +|.=++ -+.++.+-+......+. +|...
T Consensus 190 ~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGL-----AGiRvG~~~~~~~ia~iln~~KaPYN--iS~~~ 262 (375)
T KOG0633|consen 190 DNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGL-----AGIRVGYGAFPLSIAEILNRAKAPYN--ISVAG 262 (375)
T ss_pred CCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCc-----ceeEeecccccHHHHHHHHhccCCcc--ccchh
Confidence 3689999999622111 11111 1123889999999983 443332 23344443333322222 12211
Q ss_pred HHHHHh-----cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-C-CHHHH
Q 027424 77 CWICLR-----GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-G-SLALS 149 (223)
Q Consensus 77 a~ll~~-----~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~-~~~~~ 149 (223)
+...+. +++.++.--..+.+.-.+|-.-|..-|.+.. |||- .....+-+++ + +...+
T Consensus 263 s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~--~~gg--------------~daNFiLi~v~~~~n~~a 326 (375)
T KOG0633|consen 263 SVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLND--YPGG--------------SDANFILIEVTGGDNGMA 326 (375)
T ss_pred HHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccC--CCCc--------------ccccEEEEEEcCCCcHHH
Confidence 222222 4556666667777778888888988888766 6631 1345555665 3 33334
Q ss_pred HHHH-hhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHH
Q 027424 150 KHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKA 217 (223)
Q Consensus 150 ~~f~-~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-~~dL~~dl~~A 217 (223)
++.+ ..+.-...-+-+=|.+ .| -.|.+|++||-++ -.-|++-|+|-
T Consensus 327 kkly~q~at~~gVvVRfrgse---------------------~~-c~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 327 KKLYKQDATKMGVVVRFRGSE---------------------EG-CKGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred HHHHHHHHHhcceEEEEcCCc---------------------cc-cceeEEEEcCCcccchHHHHHHHhh
Confidence 4433 2221111111111111 11 3578999999654 56777777764
No 348
>PRK07480 putative aminotransferase; Validated
Probab=95.34 E-value=0.21 Score=46.79 Aligned_cols=121 Identities=22% Similarity=0.249 Sum_probs=64.8
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH-HHH-hcCC--
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQN-AEGS-- 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-~~~-~~g~-- 70 (223)
+|+++|+++|+|+.... + +.+.-...-.||++ +.|.++|.---+++++ .+ +++.+.+.. ... ..+.
T Consensus 248 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi~av~-~~-~~i~~~~~~~~~~~~~~~T~ 323 (456)
T PRK07480 248 ICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGYIPMGAVG-VG-DRVAEVLIEEGGEFNHGFTY 323 (456)
T ss_pred HHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCCccceEEE-Ec-HHHHHHHhcCCCCcccCCCC
Confidence 58999999999998521 1 11221112257765 5899986211255544 54 455554421 000 1121
Q ss_pred CCChHhHHHHHhcHHHHHH-H-HHHH-HhHHHHHHHHHh---cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 71 GLAPFDCWICLRGVKTMAL-R-VEKQ-QDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl~~-R-~~~~-~~na~~la~~L~---~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
.-+|..|...+..|+.+.. . +++. .+....+.+.|+ +||.|..| +|.|.|+.+++
T Consensus 324 ~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~v------------------rG~Glm~gie~ 384 (456)
T PRK07480 324 SGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEV------------------RGVGLVGAIEL 384 (456)
T ss_pred CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeE------------------EeecceEEEEE
Confidence 2467777777777776642 1 1222 233444444444 34433333 47899999998
No 349
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=95.31 E-value=0.35 Score=46.16 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=34.8
Q ss_pred cccc--CCEEEEecCCCCCCC--cCcccCCC--cEEEecccccccCCcccceeEEEecCh
Q 027424 2 AHAH--GALLLVDNSIMSPVL--SRPLELGA--DIVMHSATKFIAGHSDVMAGVLAVKGE 55 (223)
Q Consensus 2 a~~~--g~~lvVDnT~~s~~~--~~pl~~GA--Divv~S~tK~l~G~~d~~~G~v~~~~~ 55 (223)
|+++ +++||+|+.++.... ...+..-. =|+++|++|+++-.|-.+|.++ .+++
T Consensus 269 a~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~-~~~~ 327 (521)
T TIGR03801 269 VANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIA-LHKD 327 (521)
T ss_pred HHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhh-cCch
Confidence 5555 899999999864321 11122211 2899999999987777886644 5543
No 350
>PRK07483 hypothetical protein; Provisional
Probab=95.19 E-value=0.14 Score=47.73 Aligned_cols=120 Identities=15% Similarity=0.212 Sum_probs=64.8
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcc-cceeEEEecChhHHHHHHHHH--HhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQ--NAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d-~~~G~v~~~~~~~~~~l~~~~--~~~g~~ 71 (223)
+|++||+++|+|+....- +.+.-...-.||++- .|.++| +- -+++ ++.++ ++.+.+..-. -..+.+
T Consensus 229 lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~g-G~~Pi~a-v~~~~-~i~~~~~~~~~~~~h~~T 303 (443)
T PRK07483 229 VCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTI--AKGLGA-GYQPIGA-VLASD-RIYDAIADGSGFFQHGHT 303 (443)
T ss_pred HHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeee--hhhhcc-CccccEE-EEEcH-HHHHHHhcCCCccccCCC
Confidence 589999999999984211 111112223688876 799986 32 2444 54544 5554442110 012222
Q ss_pred --CChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 72 --LAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 72 --~sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
-+|..+...+..|+.+... +++..+....+.+.| ++||.|..| +|.|.|+.+++
T Consensus 304 ~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------RG~Glm~gie~ 365 (443)
T PRK07483 304 YLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDI------------------RGRGLFVGVEL 365 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeE------------------eecccEEEEEE
Confidence 3677776666666655321 233333333333333 345544444 46899999998
No 351
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=94.95 E-value=1.5 Score=39.99 Aligned_cols=137 Identities=13% Similarity=0.086 Sum_probs=81.3
Q ss_pred cccCCEEEEecCCCCCCCcCcccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHH-------HH---HHh--cC
Q 027424 3 HAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-------FL---QNA--EG 69 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~~~pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~-------~~---~~~--~g 69 (223)
+.+++++|||.+- .+..+|++.- -|+++-|.-|.++-.| .++++.+++.+ ++.. .+ ... +-
T Consensus 165 ~~~~~llvvD~sS--~~~s~pid~~~~dvi~agsQKnlgP~G---ltvvivs~~al-~~~~~~~p~~ldy~~~~~~~s~~ 238 (364)
T PRK12462 165 GLPDSPLIADMSS--DFMSRPFDVEAYGMVYAHAQKNLGPAG---VTVAIIRRALL-ERVPDTLPPMLDFRTHVEHRSNY 238 (364)
T ss_pred ccCCCeEEEEcCc--hhhCCCCChHHccEEEeeccccCCCCc---eEEEEECHHHH-hhccccCCchhhHHHHHhcCCCC
Confidence 4468999999883 3344555532 3999999999998333 23565665433 2211 11 111 11
Q ss_pred CCCChHhHHHHHhcHHHH-------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 SGLAPFDCWICLRGVKTM-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl-------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.+.+-+..|.+...++.+ ..+.+++.+.|..+-+++++.+.+ |+.-.. |. .+ .=--++|.
T Consensus 239 nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~----~~~~~~-~~---~R-----S~mnv~f~ 305 (364)
T PRK12462 239 NTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEV----IDCHAH-RA---AR-----STMNVAFR 305 (364)
T ss_pred CCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCc----ccCCCC-hh---hc-----CcceEEEE
Confidence 122335666666666654 355688899999999999998742 332211 11 11 12236677
Q ss_pred eCCHHHHHHHHhhcCc
Q 027424 143 TGSLALSKHVVETTKY 158 (223)
Q Consensus 143 ~~~~~~~~~f~~~l~l 158 (223)
+.+++..++|+...+-
T Consensus 306 ~~~~~l~~~f~~~a~~ 321 (364)
T PRK12462 306 FRQPRLDTLFKEQSTE 321 (364)
T ss_pred cCCHHHHHHHHHHHHH
Confidence 7777778888877653
No 352
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=94.84 E-value=0.41 Score=42.68 Aligned_cols=139 Identities=20% Similarity=0.177 Sum_probs=85.2
Q ss_pred CCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C-ChHhH-HHH
Q 027424 6 GALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L-APFDC-WIC 80 (223)
Q Consensus 6 g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~-sp~da-~ll 80 (223)
++.+.|||-+|-.+- ..|...|||+...|+-|-.+|.--..||.+.++ +++.+.........|.. - +.+++ ..+
T Consensus 201 n~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk-~~~ve~~~yRlTaPGIG~e~Gat~~~l~~m 279 (416)
T COG4100 201 NVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGK-AELVEAAAYRLTAPGIGREGGATLYSLREM 279 (416)
T ss_pred CEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeech-HHHHHhhceeeecCCccccccccHHHHHHH
Confidence 588999999987664 668899999999999999998777788988754 45544332211111110 0 11222 223
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~ 159 (223)
.+|+=-.+.-..+..+-|...|.+|++.. ||.. |-+. .+| .--+=++.|++++..-+|+.+++-.
T Consensus 280 yqGlFlAPhvv~qa~Kga~fta~~le~lg------~~~~---P~~~-~kR----tDlIQavkf~~~eKmIaFcqaiQ~a 344 (416)
T COG4100 280 YQGLFLAPHVVSQAVKGAHFTARFLEKLG------FPVN---PKYD-AKR----TDLIQAVKFGSKEKMIAFCQAIQAA 344 (416)
T ss_pred HhhhccchHHHHHHhhhhHHHHHHHHHcC------CCCC---Cccc-ccc----cchhhheecCCHHHHHHHHHHHhhc
Confidence 33433334445677778888888888643 3322 2221 111 1223346678888888898887643
No 353
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=94.83 E-value=0.25 Score=45.12 Aligned_cols=101 Identities=18% Similarity=0.244 Sum_probs=63.3
Q ss_pred cCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHH---------HH---------
Q 027424 5 HGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---------LQ--------- 65 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~---------~~--------- 65 (223)
+++++|||.+-+- ...|++. +.|+++.|.-|.++++. -.+.++.+++.+ ++... +.
T Consensus 154 ~~~lliVDavSs~--g~~~l~~d~iDv~~tgsQK~L~~pp--Gls~v~vs~~Al-~~~~~~~~y~~~~~~~~~~~~~~~~ 228 (374)
T TIGR01365 154 REGLTICDATSAA--FAQDLDYHKLDVVTFSWQKVLGGEG--AHGMLILSPRAV-ARLESYTPAWPLPKIFRLTKGGKLN 228 (374)
T ss_pred CCCcEEEEccchh--cCCCCChhHCcEEEEechhccCCCC--ceEEEEECHHHH-HHHhhcCCCCCChhhhccccccchh
Confidence 5899999988422 2233332 59999999999999874 234555665433 22221 00
Q ss_pred -Hhc-C--CCCCh-HhHHHHHhcHH------HHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 66 -NAE-G--SGLAP-FDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 66 -~~~-g--~~~sp-~da~ll~~~l~------tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
... + ..+.| +..|.+.+.|+ -+..|.+|+.+++..+-+++++.+.
T Consensus 229 ~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~ 284 (374)
T TIGR01365 229 KKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNW 284 (374)
T ss_pred hhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 001 1 12233 33444455553 2678999999999999999999874
No 354
>PRK07046 aminotransferase; Validated
Probab=94.82 E-value=0.14 Score=47.81 Aligned_cols=120 Identities=19% Similarity=0.172 Sum_probs=65.3
Q ss_pred CccccCCEEEEecCCC--CCCC--cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-------HhcC
Q 027424 1 MAHAHGALLLVDNSIM--SPVL--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~--s~~~--~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------~~~g 69 (223)
+|+++|+++|+|+... ..+. +.-...-.||++ +.|.++| +-- .|+++++ +++.+.+.... ...+
T Consensus 247 lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t--~gK~lgg-G~P-i~av~g~-~~i~~~~~~~~~~~~~~~~~~~ 321 (453)
T PRK07046 247 LTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLV--VGKPIAG-GVP-CAVYGFS-AELAERAQAAKASAPPGHSGIG 321 (453)
T ss_pred HHHHhCCEEEEEccccCccCCcchhHHhCCCcccee--ehhhhcC-CCc-ceeeeeh-HHHHHHHhhccccCCCCCceeC
Confidence 4899999999999863 1111 111122369886 6999997 334 4556554 45555443110 0112
Q ss_pred CC--CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 70 SG--LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 70 ~~--~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
.+ -+|..+...+..|+.+.. -+++..+....+.+.|+ +++.+..| .|.|.++.|
T Consensus 322 ~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v------------------~g~G~~~~i 383 (453)
T PRK07046 322 TTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHV------------------TRVGARVEF 383 (453)
T ss_pred CCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEE------------------EEeCcEEEE
Confidence 22 367666666666665522 13444444445544444 34432222 467888888
Q ss_pred Ee
Q 027424 142 LT 143 (223)
Q Consensus 142 ~~ 143 (223)
.+
T Consensus 384 ~~ 385 (453)
T PRK07046 384 QF 385 (453)
T ss_pred EE
Confidence 76
No 355
>PLN02263 serine decarboxylase
Probab=94.57 E-value=0.56 Score=44.23 Aligned_cols=113 Identities=21% Similarity=0.287 Sum_probs=72.3
Q ss_pred CccccCC-----EEEEecCCCCCCC---cC--ccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHH----HH
Q 027424 1 MAHAHGA-----LLLVDNSIMSPVL---SR--PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----FL 64 (223)
Q Consensus 1 ia~~~g~-----~lvVDnT~~s~~~---~~--pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~----~~ 64 (223)
+|+++|+ ++=||.++|+.+. .. +++ .+||=+.-+.||++.-+ .-+|++..+.+.+ ..+. ++
T Consensus 253 i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P--~~cgvll~R~~~~-~~~~~~~~Yl 329 (470)
T PLN02263 253 TLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCP--MPCGVQITRMEHI-NVLSSNVEYL 329 (470)
T ss_pred HHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCC--cCEEEEEEehhhH-hhhccChHhh
Confidence 3566775 9999999977432 11 122 24898999999999844 5577777775432 2221 11
Q ss_pred H----HhcCCC--CChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 65 Q----NAEGSG--LAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 65 ~----~~~g~~--~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
. ...|.- ..+.-.|..++ |.+.+..++++..++|+.+++.|++.+ +..+.-|
T Consensus 330 ~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p 389 (470)
T PLN02263 330 ASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNE 389 (470)
T ss_pred CCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCC
Confidence 0 111211 12345566555 556688999999999999999999885 4455545
No 356
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=94.16 E-value=1.1 Score=40.68 Aligned_cols=169 Identities=21% Similarity=0.260 Sum_probs=101.3
Q ss_pred CEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHH----------HHhcCC--CCC
Q 027424 7 ALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----------QNAEGS--GLA 73 (223)
Q Consensus 7 ~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~----------~~~~g~--~~s 73 (223)
.++|+|-|- ..+-+|++. .-|++.-|.=|-+++-+ -++++.+++ +.+++... ....|. .+.
T Consensus 171 ~~~v~D~SS--~ilsr~iDvsk~dviyagaQKnlGpaG---ltvvIvr~~-~l~r~~~~~~P~if~y~~~~~~~s~yNTP 244 (365)
T COG1932 171 GLLVADASS--AILSRPIDVSKYDVIYAGAQKNLGPAG---LTVVIVRPD-LLERAESYTLPSIFDYLTHADNGSMYNTP 244 (365)
T ss_pred ceEEEeccc--HHhcCCCChhHcceEEEehhhccCccc---eEEEEEcHH-HHhcccccCCchHhhchhhhccCCccCCc
Confidence 789999873 445566664 45899999999999765 356777764 33332211 111121 123
Q ss_pred h-HhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 74 P-FDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 74 p-~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
| +.-|++.-.++-+ ..-.+|..++|+.|-+|+++++.......|. .+ .---++|.+.+.
T Consensus 245 ptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~---------~R-----S~mnV~f~~~~~ 310 (365)
T COG1932 245 PTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKA---------NR-----SRMNVTFTLVDA 310 (365)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchh---------hc-----cceeEEEEcCcH
Confidence 3 5555655566654 3335777889999999999987533322221 11 123356777677
Q ss_pred HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhc
Q 027424 147 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 220 (223)
Q Consensus 147 ~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~ 220 (223)
+..+.|+..+.--.. ..+-| |. +..| +|.|++ +||++-|++-++.+.++
T Consensus 311 ~ld~~fv~eae~~gl-~~lkG------------hr-----------~vgG-mRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 311 ELDKGFVAEAEAAGL-IYLKG------------HR-----------SVGG-LRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred HHHHHHHHHHHHcCC-ceecc------------cc-----------CCCc-eeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 777788755432211 11111 11 1334 999998 88999998888776653
No 357
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=93.33 E-value=1.2 Score=41.72 Aligned_cols=140 Identities=19% Similarity=0.251 Sum_probs=82.1
Q ss_pred CccccCCEEEEecCCCCCCC--------cCcccCCCcEEEecccccccCCcccceeEE----------EecChhHH-HH-
Q 027424 1 MAHAHGALLLVDNSIMSPVL--------SRPLELGADIVMHSATKFIAGHSDVMAGVL----------AVKGERLA-KE- 60 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--------~~pl~~GADivv~S~tK~l~G~~d~~~G~v----------~~~~~~~~-~~- 60 (223)
+|+++|++|=||.++++..+ .+-++ .||=+-.-.||.+.-|=|.-.=++ .+++..+. +.
T Consensus 260 Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie-~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~ 338 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAFICPEFRYLMRGIE-YADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQ 338 (511)
T ss_pred hhhhcCEEEEeehhhccccccCHHHHHHhhcch-hhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhh
Confidence 58999999999999975432 23344 367666677777765544321111 11111110 00
Q ss_pred -----HHHHHHhcCCCCChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 61 -----LYFLQNAEGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 61 -----l~~~~~~~g~~~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
.+.++-.+|--.-..-.|..+| |.+.+..+++++.+-|+..-+.+.+-|..+-+.-+
T Consensus 339 ~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~---------------- 402 (511)
T KOG0628|consen 339 GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR---------------- 402 (511)
T ss_pred ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc----------------
Confidence 0001111111111234566665 66778888999988888888888887765443322
Q ss_pred CCCeeEEEEe-CCHHHHHHHHhhcCc
Q 027424 134 GAGSVLSFLT-GSLALSKHVVETTKY 158 (223)
Q Consensus 134 g~ggl~sf~~-~~~~~~~~f~~~l~l 158 (223)
.=||++|.+ ++.+.-++++++++.
T Consensus 403 -~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 403 -ILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred -ccceeEEeecCCcHHHHHHHHHHHh
Confidence 447999998 556667778877754
No 358
>PRK09275 aspartate aminotransferase; Provisional
Probab=93.23 E-value=1.6 Score=41.78 Aligned_cols=52 Identities=12% Similarity=0.148 Sum_probs=34.0
Q ss_pred cccCCEEEEecCCCCCCC-cCc-ccC--CCcEEEecccccccCCcccceeEEEecCh
Q 027424 3 HAHGALLLVDNSIMSPVL-SRP-LEL--GADIVMHSATKFIAGHSDVMAGVLAVKGE 55 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~-~~p-l~~--GADivv~S~tK~l~G~~d~~~G~v~~~~~ 55 (223)
|+++++||+|++++.-.. +.+ +.. .--|+++|+||+++-.|-.+|.++ ++++
T Consensus 273 ~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~-~~~~ 328 (527)
T PRK09275 273 KRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIA-LHED 328 (527)
T ss_pred cCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhh-cCch
Confidence 356999999999864321 111 111 123999999999986677776644 5554
No 359
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=93.22 E-value=0.67 Score=43.16 Aligned_cols=105 Identities=27% Similarity=0.306 Sum_probs=57.3
Q ss_pred CccccCCEEEEecCC--CCCCCcCcccCCCcEEEecccccccC---CcccceeEEEecChhHHHH---------------
Q 027424 1 MAHAHGALLLVDNSI--MSPVLSRPLELGADIVMHSATKFIAG---HSDVMAGVLAVKGERLAKE--------------- 60 (223)
Q Consensus 1 ia~~~g~~lvVDnT~--~s~~~~~pl~~GADivv~S~tK~l~G---~~d~~~G~v~~~~~~~~~~--------------- 60 (223)
++|++|+.+++ .+= +=....+|=++||||||.+ +|.|+- .|-=-+|.+.++.+ +.+.
T Consensus 221 ~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r~lPGRiVG~t~D~~G~ 297 (429)
T PF02347_consen 221 IAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVRQLPGRIVGQTKDADGK 297 (429)
T ss_dssp HHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGGGS-S-EEEEEEBCCCS
T ss_pred HHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhhhCCCceeccccccccc
Confidence 47899999888 442 1234688999999999888 898872 22223677766543 2110
Q ss_pred ------H----HHHHHh--cCCCCCh-------HhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 61 ------L----YFLQNA--EGSGLAP-------FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 61 ------l----~~~~~~--~g~~~sp-------~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
| ..+++- +....+. -..|+.+.|=+-|..-.++...||..+++.|++.
T Consensus 298 ~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 298 RAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp CCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 011111 1111111 1244555555555666688889999999999987
No 360
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=93.07 E-value=2.5 Score=41.21 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=52.8
Q ss_pred CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-----------------hcCCCCC--hHhHHHHHhcH---
Q 027424 27 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----------------AEGSGLA--PFDCWICLRGV--- 84 (223)
Q Consensus 27 GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-----------------~~g~~~s--p~da~ll~~~l--- 84 (223)
+||=++-..||++.- ---+|+++.++.++.+.+..... ..|.-.. ....|+.+|.+
T Consensus 373 ~ADSItvDpHK~g~~--Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G 450 (608)
T TIGR03811 373 EAESVTIDPHKMGYI--PYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLN 450 (608)
T ss_pred CceEEEeCccccccc--CCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcC
Confidence 799999999999763 34578888888765443321111 0111111 34566666554
Q ss_pred -HHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 85 -KTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 85 -~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
+-+...+++..++|+.+++.|+++
T Consensus 451 ~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 451 VTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356778899999999999999985
No 361
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.91 E-value=0.28 Score=45.68 Aligned_cols=100 Identities=21% Similarity=0.180 Sum_probs=71.3
Q ss_pred ccccCCEEEEecCCCCCC------------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--HHh
Q 027424 2 AHAHGALLLVDNSIMSPV------------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNA 67 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~------------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--~~~ 67 (223)
.+++.+.+.+|+++..+. .++|- -+||.+.-.||.++. .||.+. .++++.+.++.. ...
T Consensus 302 kkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~--dvDImMGtftKSfga----~GGyia-gsk~lid~lrt~s~~~~ 374 (519)
T KOG1357|consen 302 KKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE--DVDIMMGTFTKSFGA----AGGYIA-GSKELIDYLRTPSPSAL 374 (519)
T ss_pred hccccEEEEeeccccccccCCCCcceeeccCCCch--hheeecceehhhccc----ccceec-CcHHHHhhhccCCCcee
Confidence 467889999999974432 23333 478999999999985 367664 455665554432 234
Q ss_pred cCCCCChHhHHHHHhcHHHH---------HHHHHHHHhHHHHHHHHHhcC
Q 027424 68 EGSGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~tl---------~~R~~~~~~na~~la~~L~~~ 108 (223)
.+..+||--+...+.+++.. ..++++..+|.......|++.
T Consensus 375 yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 375 YATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred ecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 56678888888888888885 466788888888887777654
No 362
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=92.81 E-value=3.2 Score=38.56 Aligned_cols=103 Identities=20% Similarity=0.245 Sum_probs=67.8
Q ss_pred CccccCCEEEEecCCCCCC--------CcC-cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPV--------LSR-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~--------~~~-pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+||++|+...+|+.++-++ .-+ -+-.-.||+...+-|.|+ .+||.+.... .+.+-++.+.. .+.
T Consensus 328 vah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafG----cVGGYIAat~-~LvDmiRSyAaGFIFT 402 (570)
T KOG1360|consen 328 VAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFG----CVGGYIAATR-KLVDMIRSYAAGFIFT 402 (570)
T ss_pred HHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcc----cccceehhhh-hHHHHHHHhcCceEEe
Confidence 4899999999999976443 222 233357899999999998 3799986544 56565555432 344
Q ss_pred CCCChHhHHHHHhcHHHH---HHHH--HHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRV--EKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~--~~~~~na~~la~~L~~~ 108 (223)
.++.|.--.-.+.+++-+ +.|. ++|.+|...+.+.|...
T Consensus 403 TSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 403 TSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred cCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 567774433344444444 2232 66788889998888765
No 363
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=90.64 E-value=0.8 Score=42.22 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=64.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcc------c-CCC---cEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc-C
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPL------E-LGA---DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl------~-~GA---Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-g 69 (223)
+|++||+++|.|+++.- +.+.+. . -|+ -|.|.|+.|+++--|=.+||++ + ++.+...++..+... =
T Consensus 200 l~~k~~~lvisDevYe~-~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~i-g-p~~L~~~~~~vh~~~~~ 276 (420)
T KOG0257|consen 200 LCKKHGLLVISDEVYEW-LVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAI-G-PKHLYSALFPVHQNFVF 276 (420)
T ss_pred HHHHCCEEEEEhhHhHH-HhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeee-c-hHHhhhhHHHHhhcccc
Confidence 58899999999999632 111221 1 133 4889999999997666777755 4 666665555443322 1
Q ss_pred CCCChH-hHHHHHhcH----------HHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 70 SGLAPF-DCWICLRGV----------KTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~~sp~-da~ll~~~l----------~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
.+.+|. .+.....++ .....+.+...+|-..|++.|+.-
T Consensus 277 ~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 277 TCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred ccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234442 222222222 223345677888899999999875
No 364
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=90.61 E-value=2.7 Score=38.52 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=76.6
Q ss_pred cccCCEEEEecCC---CCCCCcC--cccC----CC-cEEEecccccccCCcccceeEEEecC-hhHHHH----HHHHHHh
Q 027424 3 HAHGALLLVDNSI---MSPVLSR--PLEL----GA-DIVMHSATKFIAGHSDVMAGVLAVKG-ERLAKE----LYFLQNA 67 (223)
Q Consensus 3 ~~~g~~lvVDnT~---~s~~~~~--pl~~----GA-Divv~S~tK~l~G~~d~~~G~v~~~~-~~~~~~----l~~~~~~ 67 (223)
+++|...++|-++ +.++..+ ++.+ +- =+|+.|++|-|+=.+..+|+..++.. ++...+ ++...+.
T Consensus 202 ~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~ 281 (396)
T COG1448 202 KERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRT 281 (396)
T ss_pred HHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHh
Confidence 5678889999885 3332211 1111 11 38999999999999999999665543 333332 3332222
Q ss_pred cCCCCChHhHHHHHhcHHHHHHH----------HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCe
Q 027424 68 EGSGLAPFDCWICLRGVKTMALR----------VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 137 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~tl~~R----------~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~gg 137 (223)
.=+.....-+.++..-|++-.+| .+|+.+-...+.+.|+++..=.... .. ...-|
T Consensus 282 ~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~-----------~i----~~Q~G 346 (396)
T COG1448 282 NYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFD-----------FI----ISQRG 346 (396)
T ss_pred ccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc-----------hH----hhcCc
Confidence 11111113344433333322211 2455555566777777642100111 11 12468
Q ss_pred eEEEEeCCHHHHHHHHhhcCcce
Q 027424 138 VLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 138 l~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
|||+.=-+++++.+.-+...+..
T Consensus 347 MFsy~Gls~~QV~rLree~~IY~ 369 (396)
T COG1448 347 MFSYTGLSPEQVDRLREEFGIYL 369 (396)
T ss_pred eeecCCCCHHHHHHHHHhccEEE
Confidence 98886337788888777777653
No 365
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=90.59 E-value=2.9 Score=42.73 Aligned_cols=51 Identities=37% Similarity=0.569 Sum_probs=37.6
Q ss_pred CccccCCEEEEecCCCC-CCCcCcccCCCcEEEeccccccc-----CCcccceeEEEecC
Q 027424 1 MAHAHGALLLVDNSIMS-PVLSRPLELGADIVMHSATKFIA-----GHSDVMAGVLAVKG 54 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-~~~~~pl~~GADivv~S~tK~l~-----G~~d~~~G~v~~~~ 54 (223)
++|++|++++|+.-..+ -...+|=++||||||.+.-++-. |+. +|.+.+++
T Consensus 218 ~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~---aG~~a~~~ 274 (939)
T TIGR00461 218 ALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPH---AAFFAVKD 274 (939)
T ss_pred HHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCc---eeeeeecH
Confidence 37899999999765433 34578999999999887766633 553 78787764
No 366
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=89.50 E-value=3.7 Score=37.25 Aligned_cols=177 Identities=17% Similarity=0.225 Sum_probs=86.9
Q ss_pred CCEEEEecCCCCCCCcCcccCCC--cEEEecccccccCCc-ccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHHHh
Q 027424 6 GALLLVDNSIMSPVLSRPLELGA--DIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 82 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~~pl~~GA--Divv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll~~ 82 (223)
+..+|-|=++==|. +.|+..-| ||.+-+++|+- ||+ -.+||++ ++++++.+++..+.......+|-+.=-..++
T Consensus 162 ~~k~I~D~AYYWPh-yTpI~~~aD~DiMLFT~SK~T-GHAGSR~GWAl-VKD~~Va~kM~~y~~lnTiGvS~dsQLRa~k 238 (363)
T PF04864_consen 162 SGKVIHDLAYYWPH-YTPITAPADHDIMLFTLSKLT-GHAGSRFGWAL-VKDEEVAKKMTKYMELNTIGVSRDSQLRALK 238 (363)
T ss_dssp EEEEEEE-TT-STT-TS---S-B--SEEEEEHHHHC-S-GGG-EEEEE-ES-HHHHHHHHHHHHHHCSS--HHHHHHHHH
T ss_pred Ccceeeeeeeeccc-ccccCCCCCCceEEEEEeccc-Cccccccceee-ecCHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 45678887742121 23444333 79999999986 464 5677766 6888888887665433332344432111222
Q ss_pred cHHHHHH---------H-----HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE-eC--C
Q 027424 83 GVKTMAL---------R-----VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TG--S 145 (223)
Q Consensus 83 ~l~tl~~---------R-----~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~-~~--~ 145 (223)
-|+.... + .+.+.+.-.+|.+-+++.. +...|.+ .|+|--..++....++-+.-. .. +
T Consensus 239 iLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~---rFSLq~~--~~~yC~ff~~~~~psPafAWlkCe~ee 313 (363)
T PF04864_consen 239 ILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASK---RFSLQKF--SPQYCNFFKRVREPSPAFAWLKCEREE 313 (363)
T ss_dssp HHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSS---SEEE-----SCEEETTTTCEEE---SEEEEEESSCG
T ss_pred HHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC---ceecCcC--CchhccccccccCCCCCeEEEecCCcc
Confidence 2222211 1 1334455566767776653 3445544 244432222222233333332 22 3
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHH
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLD 215 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--Ed~~dL~~dl~ 215 (223)
.+++..|+.+.+++..+- ...|.+...+|||.-- +|.+.|++.|.
T Consensus 314 d~DC~~~l~~~~I~tr~G-------------------------~~fga~~ryVRlSml~~~d~Fd~l~~rL~ 360 (363)
T PF04864_consen 314 DEDCYAVLREAKIITRSG-------------------------VLFGADSRYVRLSMLKRDDDFDQLLERLS 360 (363)
T ss_dssp GSSHHHHHHCTTEEEEEG-------------------------GGGTS-TTEEEEESSS-HHHHHHHHHHHH
T ss_pred cccHHHHHHhCCcccCCC-------------------------CccCCCCCeEEEeccCCHHHHHHHHHHHH
Confidence 457899999999885421 1245677889999763 23555665543
No 367
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=89.22 E-value=1 Score=42.48 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=54.7
Q ss_pred CccccCCEEEEecCCCCCCCc------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~~~g~~-- 71 (223)
+|+++|+++|+|+.. +++-. .-+..-.||+ .+.|.++|. --+|+ ++++ +++.+.+... ....+.+
T Consensus 275 lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~--t~gK~lggG-~Piga-v~g~-~ei~~~~~~~~~~~~~~T~~ 348 (474)
T PLN02482 275 ITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLT--TLGKVIGGG-LPVGA-YGGR-REIMEMVAPAGPMYQAGTLS 348 (474)
T ss_pred HHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEE--EecchhhCC-CceEE-EEEc-HHHHHhhccCCCcccccCcc
Confidence 488999999999997 44311 1111235775 558999863 44555 4444 4565544211 0112222
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~ 106 (223)
-+|..+...+..|+.+.. ..++..+....+.+.|+
T Consensus 349 gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~ 385 (474)
T PLN02482 349 GNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGIL 385 (474)
T ss_pred hhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 256666556666665532 33555555555555554
No 368
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=88.90 E-value=1.1 Score=41.55 Aligned_cols=100 Identities=15% Similarity=0.157 Sum_probs=54.5
Q ss_pred CccccCCEEEEecCCCCCCCcC------cccCCCcEEEecccccccCCcccceeEEEecChhHHHH--HHHH--HH--hc
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE--LYFL--QN--AE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~--l~~~--~~--~~ 68 (223)
+|+++|+++|+|+.+ +++... -+..-.||+ .+.|.++| + ..+|+++++ +++.+. +... .. ..
T Consensus 212 lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~--t~gK~lgg-G-~p~~av~~~-~~i~~~~~~~~~~~~~~~~~ 285 (431)
T PRK06209 212 LCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLS--CFGKALGN-G-FAVSALAGK-REYMELGGLEHTDRERVFLL 285 (431)
T ss_pred HHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCccee--eehhhhcC-C-cccEEEEEH-HHHHhhhcccccCCCCceee
Confidence 478999999999986 443221 111225764 46899997 3 345666554 445432 1100 01 12
Q ss_pred CCCC--ChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh
Q 027424 69 GSGL--APFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 69 g~~~--sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~ 106 (223)
+.+. +|..+...+..|+.+.. ..++..++...+.+.|+
T Consensus 286 ~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~ 327 (431)
T PRK06209 286 STTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVN 327 (431)
T ss_pred ccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 3343 34667777777776632 23444455555555444
No 369
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=88.08 E-value=0.34 Score=44.43 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=36.7
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCC-CcEEEecccccccCCccccee-EEEecChhHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELG-ADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~G-ADivv~S~tK~l~G~~d~~~G-~v~~~~~~~~~~l 61 (223)
|||++|+|.||-|+++- ...+++.+.| .|++++|+-|-|-=+ .|| ++...++.....+
T Consensus 180 iC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VP---vGgai~As~~~~~i~~v 245 (389)
T PF05889_consen 180 ICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVP---VGGAIMASFDPSGILAV 245 (389)
T ss_dssp HHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEE---SSHEEEEESSHHHHHHH
T ss_pred HHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEec---CCCcEEEecCHHHHHHH
Confidence 58999999999999964 1233455555 699999999987633 244 4444444444433
No 370
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=88.02 E-value=2.3 Score=39.17 Aligned_cols=115 Identities=26% Similarity=0.384 Sum_probs=68.5
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc-CC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHH---HhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE-LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~-~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~---~~~g~ 70 (223)
+++++|.+.|.|+.- |++. +..++ +| .||| ++.|.+++ +.-++++| .. +++...+.... +.+|
T Consensus 241 ~v~k~Ggl~IaDEVq-tGfGRtG~~wgfe~h~v~PDIv--TmAKgiGn-G~Pl~AVv-tt-~EIa~v~~~~~~~fnTyg- 313 (442)
T KOG1404|consen 241 VVRKRGGLFIADEVQ-TGFGRTGHMWGFESHGVVPDIV--TMAKGIGN-GFPLGAVV-TT-PEIADVLNQKSSHFNTYG- 313 (442)
T ss_pred HHHHcCCEEEehhhh-hccccccccccccccCCCccHH--HHHhhccC-CCcceeee-cC-HHHHHHHHhccccccccC-
Confidence 368899999999984 2211 11122 23 3655 78899985 35565544 44 46665544322 2233
Q ss_pred CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh--------cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 71 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA--------SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~--------~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
-.|..|..-+.-|+-+ +-++..+|+..+..+|. +||-|-.| +|-|-|+-+|
T Consensus 314 -gnP~a~avg~aVL~Vi--kee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV------------------RG~GLm~GvE 372 (442)
T KOG1404|consen 314 -GNPVACAVGLAVLKVI--KEENLQENAAEVGSYLLEKLAALKDKHPIIGDV------------------RGRGLMLGVE 372 (442)
T ss_pred -CCchhHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHhhcCCceeec------------------ccceeEEEEE
Confidence 2565565554444433 33667778877777766 45655554 4678888898
Q ss_pred e
Q 027424 143 T 143 (223)
Q Consensus 143 ~ 143 (223)
+
T Consensus 373 ~ 373 (442)
T KOG1404|consen 373 L 373 (442)
T ss_pred E
Confidence 7
No 371
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=87.92 E-value=1.3 Score=40.51 Aligned_cols=144 Identities=17% Similarity=0.285 Sum_probs=79.8
Q ss_pred CccccCCEEEEecCCC----CC-CC---cCcccCCCcEEEecccccccCCcccceeEEEecChhHH--HHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIM----SP-VL---SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA--KELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~----s~-~~---~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~--~~l~~~~~~~g~ 70 (223)
|+++||+..|||+.-. |+ +. ..-|+.-+|+|.-| -|... ||..+ ++++. +.-+.+..-+|
T Consensus 300 i~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFS-KK~q~------gGffh--~~~frpn~pYrifNTWmG- 369 (484)
T KOG1405|consen 300 ITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFS-KKFQT------GGFFH--DEEFRPNEPYRIFNTWMG- 369 (484)
T ss_pred HHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehh-hhhhc------Ccccc--CcccCCCchHHHhhhhcC-
Confidence 4689999999999721 11 11 22344458998766 24433 56554 22332 11122223334
Q ss_pred CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHH
Q 027424 71 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 150 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~ 150 (223)
.|.-..++..-++-. .-+...+|+..+-++|.+-=.-.+-.||+. ..+.+|-|..+++++.+...-.
T Consensus 370 --dP~k~lll~~vv~~I--~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~---------~~~~RGrGTF~a~d~ps~~~Rd 436 (484)
T KOG1405|consen 370 --DPSKNLLLEEVVQEI--KREDLLNNVAHVGKALLKGLLELQAKYPGK---------INNLRGRGTFIAWDCPSGSIRD 436 (484)
T ss_pred --ChHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHhCchh---------hhcccccceEEEEeCCChHHHH
Confidence 564444433333322 225556666666666654211112235543 1235788999999997666667
Q ss_pred HHHhhcCcceeccccCCCC
Q 027424 151 HVVETTKYFSITVSFGSVK 169 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~ 169 (223)
+|+..+++ .|+++||+.
T Consensus 437 k~i~~~~~--nGv~~GGCg 453 (484)
T KOG1405|consen 437 KLILIARL--NGVNLGGCG 453 (484)
T ss_pred HHHHHHHH--cCceecccc
Confidence 88888776 588999753
No 372
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=87.16 E-value=1.8 Score=40.15 Aligned_cols=50 Identities=46% Similarity=0.681 Sum_probs=35.2
Q ss_pred ccccCCEEEEecC-CCCCCCcCcccCCCcEEEeccccc-----ccCCcccceeEEEecC
Q 027424 2 AHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKG 54 (223)
Q Consensus 2 a~~~g~~lvVDnT-~~s~~~~~pl~~GADivv~S~tK~-----l~G~~d~~~G~v~~~~ 54 (223)
+|++|++++|=.= .+=.++..|-++||||||-|.--+ |||+ -+|...+++
T Consensus 236 ~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGP---hag~fA~~~ 291 (450)
T COG0403 236 AHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGP---HAGYFAVKD 291 (450)
T ss_pred HhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCc---ceeeeeEhH
Confidence 6888887776432 222356778999999999998876 4555 467776654
No 373
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=85.75 E-value=1.9 Score=40.19 Aligned_cols=123 Identities=19% Similarity=0.221 Sum_probs=65.2
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g~~~sp 74 (223)
+||++|++||.|+.+...- .|.-.-.-+|+++ +-|.++|. .=.|++ ....++.+.+.-... +.+.++|.
T Consensus 229 lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDltt--lGKiIGGG--lP~ga~-gGr~eiM~~~~p~g~vyqaGT~sg 303 (432)
T COG0001 229 LTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTT--LGKIIGGG--LPIGAF-GGRAEIMEQLAPLGPVYQAGTLSG 303 (432)
T ss_pred HHHHcCcEEEEecchhhcccCCcccccccCcCcchhh--hhhhhcCC--cceeee-ccHHHHHhhhCCCCCccccCCCCC
Confidence 5789999999999973210 1222222357765 67999863 334555 344566554432221 22223332
Q ss_pred HhHHHHHhcHHHH---HH---HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 75 FDCWICLRGVKTM---AL---RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 75 ~da~ll~~~l~tl---~~---R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
. ---+..++.++ .. -+++..+.+.+|++-|++.-. +-.-| - ..++.|+|++|.+
T Consensus 304 n-plamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~--~~g~~---~---------~v~~~gsm~~i~F 363 (432)
T COG0001 304 N-PLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAE--RHGIP---L---------TVNRVGSMFGIFF 363 (432)
T ss_pred c-HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH--HhCCC---e---------EEeeecceEEEEe
Confidence 1 12234444444 32 256777777777777765311 00000 0 0235789999987
No 374
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=84.94 E-value=1.3 Score=41.19 Aligned_cols=113 Identities=17% Similarity=0.242 Sum_probs=76.1
Q ss_pred CccccCCEEEEecCCCCCCCcC--------cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH------HHH-
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY------FLQ- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~------~~~- 65 (223)
+|.+|++++=||.+|+.+++.+ -++ -||=|.-+-||.++ .-.++++.+.+.+.+..+.. ..+
T Consensus 278 iC~k~~lWmHvDAAwGGglLmS~k~R~kl~Gie-ra~SvtwnpHK~~g--aplqCsa~l~r~~gll~~Cn~~~A~YLFq~ 354 (510)
T KOG0629|consen 278 ICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIE-RANSVTWNPHKLMG--APLQCSAFLTREEGLLQRCNQMSAIYLFQQ 354 (510)
T ss_pred HHHhcCEEEEeecccccccccChhhHhhccCcc-ccCceeecHHHhhc--CcchhhHHHHHHHHHHHhhcccchhhhhcc
Confidence 4788999999999999865422 233 37888889999998 55677766655544322211 010
Q ss_pred --------------HhcCCCCChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEc
Q 027424 66 --------------NAEGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 116 (223)
Q Consensus 66 --------------~~~g~~~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~y 116 (223)
..-|-...-|--|++.+ |-+-++.++++..++|+.+-+.|++.+....|+-
T Consensus 355 dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 355 DKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred CceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 01233455577787766 4445788899999999999999998876544443
No 375
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=82.16 E-value=8.7 Score=35.71 Aligned_cols=82 Identities=15% Similarity=0.145 Sum_probs=53.2
Q ss_pred ccccCCEEEEecCCCCCCCcCc-----ccC------CCc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc
Q 027424 2 AHAHGALLLVDNSIMSPVLSRP-----LEL------GAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 68 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~p-----l~~------GAD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~ 68 (223)
|.++++-||+|+-++..++-.+ ++. --| -+|.|++|=+|-+|... |+|..+++.+......+. .+
T Consensus 255 a~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRv-GviYS~ne~VvsaA~kms-sf 332 (471)
T KOG0256|consen 255 ASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRV-GVIYSNNEDVVSAATKMS-SF 332 (471)
T ss_pred HhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEE-EEEEecChHHHHHHHHHh-hc
Confidence 5678999999999876544221 111 111 58999999999888887 678888877765444333 34
Q ss_pred CCCCChHhHHHHHhcHHH
Q 027424 69 GSGLAPFDCWICLRGVKT 86 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~t 86 (223)
| .+|++.-+++..=|.+
T Consensus 333 ~-~vSs~tQ~~la~LLSD 349 (471)
T KOG0256|consen 333 G-LVSSQTQYLLASLLSD 349 (471)
T ss_pred c-CCcHHHHHHHHHHhch
Confidence 4 3577666665554443
No 376
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=81.98 E-value=46 Score=31.28 Aligned_cols=55 Identities=25% Similarity=0.211 Sum_probs=35.2
Q ss_pred CccccCCEEEEecCCC----C----------CCCc--------CcccCCCc-----EEEecccccccCCcccceeEEEec
Q 027424 1 MAHAHGALLLVDNSIM----S----------PVLS--------RPLELGAD-----IVMHSATKFIAGHSDVMAGVLAVK 53 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~----s----------~~~~--------~pl~~GAD-----ivv~S~tK~l~G~~d~~~G~v~~~ 53 (223)
+|++|++++|.|+-+. . |..- -|--++.| |-..|.+|.++ +|..+|+ +.++
T Consensus 232 LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~-it~~ 309 (472)
T KOG0634|consen 232 LARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGW-ITGN 309 (472)
T ss_pred HHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEE-eecC
Confidence 5899999999999841 1 1100 01112333 88899999997 6777765 6566
Q ss_pred ChhH
Q 027424 54 GERL 57 (223)
Q Consensus 54 ~~~~ 57 (223)
+..+
T Consensus 310 ~~~l 313 (472)
T KOG0634|consen 310 SLFL 313 (472)
T ss_pred HHHH
Confidence 5444
No 377
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=79.96 E-value=4 Score=40.15 Aligned_cols=151 Identities=23% Similarity=0.251 Sum_probs=85.9
Q ss_pred ccccCCEEEEecCCCCC--CCcCcccCCCcEEEeccccccc---CCcccceeEEEecChhHHHHH---------------
Q 027424 2 AHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSATKFIA---GHSDVMAGVLAVKGERLAKEL--------------- 61 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~--~~~~pl~~GADivv~S~tK~l~---G~~d~~~G~v~~~~~~~~~~l--------------- 61 (223)
.|+||--|-.|.+-..- -+|+|=+.||||+=--+||+|+ |.+.--+|=+.+.. .+..-|
T Consensus 706 iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~-HLapfLP~HpVvs~~~~~~~~ 784 (1001)
T KOG2040|consen 706 IHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSPGRPEDTS 784 (1001)
T ss_pred HHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCCccchhh-hccccCCCCCccCCCCCCCCC
Confidence 58999999999874322 2589999999999999999997 21111133333221 111100
Q ss_pred --HHH-HHhcCCC-CCh-HhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcch-----------
Q 027424 62 --YFL-QNAEGSG-LAP-FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH----------- 125 (223)
Q Consensus 62 --~~~-~~~~g~~-~sp-~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~----------- 125 (223)
-.. ...+|.. +-| -=+|.-+.|.+-|..--+...-||..+|+.|++|-+ +.|-+-.++-.|
T Consensus 785 ~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYk---il~~~~~~~vaHEFIlD~r~fK~ 861 (1001)
T KOG2040|consen 785 PVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYK---ILFRGENGLVAHEFILDLRPFKK 861 (1001)
T ss_pred CccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccc---eeEecCCcceeeeeeeechhhcc
Confidence 000 0112211 111 124555556665655567777899999999999964 344433333333
Q ss_pred -------HHHHhhhC-CC---------CeeEEEEe---CCHHHHHHHHhhc
Q 027424 126 -------ELHYSQAK-GA---------GSVLSFLT---GSLALSKHVVETT 156 (223)
Q Consensus 126 -------~~~~~~~~-g~---------ggl~sf~~---~~~~~~~~f~~~l 156 (223)
++++|.+. || .|.+.+|- .+++...||+|++
T Consensus 862 ~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAl 912 (1001)
T KOG2040|consen 862 TAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDAL 912 (1001)
T ss_pred ccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHH
Confidence 34566542 21 23444553 3567788998875
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=79.74 E-value=3.2 Score=38.01 Aligned_cols=105 Identities=23% Similarity=0.169 Sum_probs=66.0
Q ss_pred CccccCCEEEEecC-CCCC-CC--cC-------c-------ccCCCcEEEecccccccCCcccceeEEEecChh---HHH
Q 027424 1 MAHAHGALLLVDNS-IMSP-VL--SR-------P-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGER---LAK 59 (223)
Q Consensus 1 ia~~~g~~lvVDnT-~~s~-~~--~~-------p-------l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~---~~~ 59 (223)
||++++++++.|.+ |+-- ++ ++ - .-..||-++.|+-|- |+. -|||.++.+++. +..
T Consensus 214 ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD--~lv-nmGGfl~~~D~~~fDvy~ 290 (471)
T COG3033 214 IAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD--GLV-NMGGFLCFKDDSFFDVYE 290 (471)
T ss_pred HHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc--cee-ccccEEEecCccHHHHHH
Confidence 58999999999998 3221 11 11 1 113799999999996 332 378999988874 444
Q ss_pred HHHHHH------HhcCCCCChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcCC
Q 027424 60 ELYFLQ------NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 60 ~l~~~~------~~~g~~~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~p 109 (223)
.++... ...| .++..|-..+..||+.- ...++...+..+.|++-|.+..
T Consensus 291 ~~~~~~V~~eG~~tYG-gl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~G 347 (471)
T COG3033 291 ECRTLVVVQEGFPTYG-GLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEAG 347 (471)
T ss_pred HHHhheEeeccccccC-cccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcC
Confidence 443321 1233 46777777788888763 2223334445578888888764
No 379
>COG3564 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.42 E-value=1 Score=33.24 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=28.2
Q ss_pred CCcchHHHHhh------hCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 121 EHPGHELHYSQ------AKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 121 ~~~~~~~~~~~------~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+.|||+.|+.. .+|-|||||++-+. | ++|+.+-+++.
T Consensus 69 s~~QyeaWKHTqLIIDVVpGRGGmFSLdng~-E--~RFLtRsrv~~ 111 (116)
T COG3564 69 SGPQYEAWKHTQLIIDVVPGRGGMFSLDNGR-E--KRFLTRSRVCS 111 (116)
T ss_pred cCcHHhhhhccEEEEEEecCCCceeEccCCc-c--eeeeeeeeeee
Confidence 57999999864 37999999987643 3 68888777664
No 380
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=70.99 E-value=20 Score=33.75 Aligned_cols=171 Identities=15% Similarity=0.203 Sum_probs=90.7
Q ss_pred cCCEEEEecCCCCCCC----cC--cccCCCcEEE---ecccccccCCccccee--EEEecChhH-HHHHHHHHHhcCC--
Q 027424 5 HGALLLVDNSIMSPVL----SR--PLELGADIVM---HSATKFIAGHSDVMAG--VLAVKGERL-AKELYFLQNAEGS-- 70 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~----~~--pl~~GADivv---~S~tK~l~G~~d~~~G--~v~~~~~~~-~~~l~~~~~~~g~-- 70 (223)
+++|+=||..-|..++ .+ ++.++.--|. -|.||| +.++.| +++.+++++ ..++....+..|+
T Consensus 248 w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKY----Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y 323 (491)
T KOG1383|consen 248 WDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKY----GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIY 323 (491)
T ss_pred hCCceeecccCccccccccccCccccccCCCCceeEeecccee----eeeecCcEEEEEcccccccceEEEeccccCccc
Confidence 7899999999876544 22 3334333332 267888 333333 444555433 2222111122221
Q ss_pred --------CCCh--HhHHH--HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCee
Q 027424 71 --------GLAP--FDCWI--CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 138 (223)
Q Consensus 71 --------~~sp--~da~l--l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl 138 (223)
-.+. ..+|. +.-|-+-+...++++.+|+..|.+.+++-+.+.-+-- ..
T Consensus 324 ~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--------------------p~ 383 (491)
T KOG1383|consen 324 ASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--------------------PL 383 (491)
T ss_pred cCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--------------------Cc
Confidence 1111 23554 4445566889999999999999999999666532221 55
Q ss_pred EEEEe-CCH-HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 027424 139 LSFLT-GSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDK 216 (223)
Q Consensus 139 ~sf~~-~~~-~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~ 216 (223)
+||.+ ++. -...++-|.++- +|-.+.+ ...|. ++.-...|+.+--+=.|++++|+++
T Consensus 384 vs~~~~~s~~~~i~elsd~l~~--~GW~lna----lq~P~---------------a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 384 VSFILFGSNDVNIFELSDLLRK--KGWILNA----LQFPA---------------AIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred EEEEEccCCccchhhhhHHHHh--cCcCccc----cCCCC---------------ceEEEEEeeeccHHHHHHHHHHHHH
Confidence 66765 321 112222222211 1111111 11232 2233456666665558999999999
Q ss_pred HHhc
Q 027424 217 ALRT 220 (223)
Q Consensus 217 Al~~ 220 (223)
+++.
T Consensus 443 ~~~e 446 (491)
T KOG1383|consen 443 VVEE 446 (491)
T ss_pred HHHH
Confidence 9874
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=70.65 E-value=14 Score=37.86 Aligned_cols=51 Identities=33% Similarity=0.381 Sum_probs=32.9
Q ss_pred CccccCCEEEEecC-CCCCCCcCcccCCCcEEEeccc-----ccccCCcccceeEEEecC
Q 027424 1 MAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSAT-----KFIAGHSDVMAGVLAVKG 54 (223)
Q Consensus 1 ia~~~g~~lvVDnT-~~s~~~~~pl~~GADivv~S~t-----K~l~G~~d~~~G~v~~~~ 54 (223)
+||++|++++|-.- .+=.++..|=++||||||.+.- =.+||+ -+|.+.+++
T Consensus 232 ~~h~~gal~~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP---~ag~~a~~~ 288 (954)
T PRK12566 232 QLHGQQALACVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGP---HAAYFACRD 288 (954)
T ss_pred HHHHcCCEEEEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCC---CeeeeeehH
Confidence 36888988654322 1123567789999999998643 234555 377777654
No 382
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=57.65 E-value=3.6 Score=35.35 Aligned_cols=30 Identities=33% Similarity=0.557 Sum_probs=24.4
Q ss_pred cccCCEEEEecCCCCCC-CcCcccCCCcEEE
Q 027424 3 HAHGALLLVDNSIMSPV-LSRPLELGADIVM 32 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~-~~~pl~~GADivv 32 (223)
.+.++|||||.-.|+|- ....+|+|+|-|.
T Consensus 179 e~a~VPviVDAGiG~pSdAa~aMElG~DaVL 209 (262)
T COG2022 179 EEADVPVIVDAGIGTPSDAAQAMELGADAVL 209 (262)
T ss_pred HhCCCCEEEeCCCCChhHHHHHHhcccceee
Confidence 45689999999999884 3568999999765
No 383
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=51.26 E-value=11 Score=35.40 Aligned_cols=40 Identities=25% Similarity=0.478 Sum_probs=33.0
Q ss_pred CccccCCEEEEecCCCCCC--CcCcccCCCcEEEeccccccc
Q 027424 1 MAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFIA 40 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~--~~~pl~~GADivv~S~tK~l~ 40 (223)
|.|++|..|-.|.+-.... ..+|=+.|+|||=--+||+|+
T Consensus 229 ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHKTF~ 270 (496)
T COG1003 229 IVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHKTFC 270 (496)
T ss_pred HHHHcCCEEEecCcchhhhhccccccccccceEEeecccccc
Confidence 4689999999997743322 378999999999999999998
No 384
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=45.87 E-value=1.1e+02 Score=27.93 Aligned_cols=113 Identities=16% Similarity=0.194 Sum_probs=58.2
Q ss_pred EEEecccccccCCcccceeEE-EecChhHHHHHHH----HHHhcCCCCChHhHHHH-------------HhcHHHHHHHH
Q 027424 30 IVMHSATKFIAGHSDVMAGVL-AVKGERLAKELYF----LQNAEGSGLAPFDCWIC-------------LRGVKTMALRV 91 (223)
Q Consensus 30 ivv~S~tK~l~G~~d~~~G~v-~~~~~~~~~~l~~----~~~~~g~~~sp~da~ll-------------~~~l~tl~~R~ 91 (223)
+|++|..|-++-.++.+|-+- +.++......+.+ ..+..-......-|..+ .++++++..|+
T Consensus 246 fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI 325 (410)
T KOG1412|consen 246 FVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRI 325 (410)
T ss_pred EEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 899999999998888887633 3455444433332 22211111111222222 34445555555
Q ss_pred HHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 92 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 92 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
.++. .+|.+.|.+. --||-= +.--+ .-|||||.=-++..++.++++-+++-
T Consensus 326 ~~MR---~aLrd~L~aL------~TPGtW-----DHI~~----QiGMFSyTGLtp~qV~~li~~h~vyL 376 (410)
T KOG1412|consen 326 KKMR---TALRDHLVAL------KTPGTW-----DHITQ----QIGMFSYTGLTPAQVDHLIENHKVYL 376 (410)
T ss_pred HHHH---HHHHHHHHhc------CCCCcH-----HHHHh----hccceeecCCCHHHHHHHHHhceEEE
Confidence 4333 2233333322 224321 11222 46899997436677888888877763
No 385
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=41.02 E-value=49 Score=30.22 Aligned_cols=98 Identities=20% Similarity=0.306 Sum_probs=56.8
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~-- 71 (223)
+|.+|++++|.|+-- |++. +.--.--.|+|+ +-|-++|.---+++++ +. ++++-.++.- ..|++
T Consensus 236 LCtkynvl~I~DEvQ-TGl~RTGk~la~d~env~PDivi--lgKalSGG~~Pvsavl-~~-~~im~~~~pg--eHgsTyg 308 (427)
T KOG1402|consen 236 LCTKYNVLLIADEVQ-TGLARTGKLLACDYENVRPDIVI--LGKALSGGVYPVSAVL-AD-DDIMLNIKPG--EHGSTYG 308 (427)
T ss_pred HHHhhcEEEEehhhh-hcccccCcEEEeehhhcCCCeEE--EeccccCCeeeeEEEE-ec-HHHHhccCCC--ccccccC
Confidence 478999999999973 2221 111112358887 6899998655556655 33 4454332211 12222
Q ss_pred CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhc
Q 027424 72 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~ 107 (223)
-+|..|...+.+|+-+. -++..+|+..|-+.|..
T Consensus 309 gNpLg~~vaiAalevi~--eekL~era~~lG~~l~~ 342 (427)
T KOG1402|consen 309 GNPLGCAVAIAALEVIV--EEKLVERAAKLGEILRD 342 (427)
T ss_pred CChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 26777777777777653 35666666666555543
No 386
>PRK08446 coproporphyrinogen III oxidase; Provisional
Probab=36.94 E-value=77 Score=28.43 Aligned_cols=13 Identities=38% Similarity=0.680 Sum_probs=10.4
Q ss_pred CeEEEEecCCCHH
Q 027424 196 DLVRISVGIEDVN 208 (223)
Q Consensus 196 ~liRlsvGlEd~~ 208 (223)
|.-|+|||+++.+
T Consensus 108 GvnRiSiGvQS~~ 120 (350)
T PRK08446 108 GVNRISFGVQSFN 120 (350)
T ss_pred CCCEEEEecccCC
Confidence 4569999999863
No 387
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=36.18 E-value=1.2e+02 Score=19.74 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCC-CCeeEEEEeCCHHHHHHHHhh
Q 027424 96 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG-AGSVLSFLTGSLALSKHVVET 155 (223)
Q Consensus 96 ~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g-~ggl~sf~~~~~~~~~~f~~~ 155 (223)
++...+++.|++.|.|..++.- .| +--++-+...+.+...+|+..
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~v---------------tG~~d~~~~v~~~d~~~l~~~i~~ 55 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSV---------------TGEYDLILKVRARDMEELEEFIRE 55 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEE---------------SSSSSEEEEEEESSHHHHHHHHHH
T ss_pred chHHHHHHHHHcCCCEEEEEEE---------------eCCCCEEEEEEECCHHHHHHHHHH
Confidence 4578899999999999999864 33 444565666888889999766
No 388
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=33.41 E-value=5.5 Score=34.27 Aligned_cols=30 Identities=33% Similarity=0.551 Sum_probs=20.0
Q ss_pred cccCCEEEEecCCCCCC-CcCcccCCCcEEE
Q 027424 3 HAHGALLLVDNSIMSPV-LSRPLELGADIVM 32 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~-~~~pl~~GADivv 32 (223)
.+.++|||||.-.|+|- ....+|+|+|-|.
T Consensus 172 ~~~~vPvIvDAGiG~pSdaa~AMElG~daVL 202 (247)
T PF05690_consen 172 ERADVPVIVDAGIGTPSDAAQAMELGADAVL 202 (247)
T ss_dssp HHGSSSBEEES---SHHHHHHHHHTT-SEEE
T ss_pred HhcCCcEEEeCCCCCHHHHHHHHHcCCceee
Confidence 45689999999998874 3568999999554
No 389
>TIGR03687 pupylate_cterm ubiquitin-like protein Pup. Members of this protein family are Pup, a small protein whose ligation to target proteins steers them toward degradation. This protein family occurs in a number of bacteria, especially Actinobacteria such as Mycobacterium tuberculosis, that possess an archeal-type proteasome. All members of this protein family known during model construction end with the C-terminal motif [FY][VI]QKGG[QE]. Ligation is thought to occur between the C-terminal COOH of Pup and an epsilon-amino group of a Lys on the target protein. The N-terminal half of this protein is poorly conserved and not represented in the seed alignment.
Probab=29.89 E-value=51 Score=19.35 Aligned_cols=15 Identities=40% Similarity=0.776 Sum_probs=12.5
Q ss_pred CCHHHHHHHHHHHHh
Q 027424 205 EDVNDLISDLDKALR 219 (223)
Q Consensus 205 Ed~~dL~~dl~~Al~ 219 (223)
++.++|+++++..|+
T Consensus 3 ~~~D~lLDeId~vLe 17 (33)
T TIGR03687 3 EGVDDLLDEIDGVLE 17 (33)
T ss_pred chHHHHHHHHHHHHH
Confidence 578899999988876
No 390
>TIGR00538 hemN oxygen-independent coproporphyrinogen III oxidase. This model represents HemN, the oxygen-independent coproporphyrinogen III oxidase that replaces HemF function under anaerobic conditions. Several species, including E. coli, Helicobacter pylori, and Aquifex aeolicus, have both a member of this family and a member of another, closely related family for which there is no evidence of coproporphyrinogen III oxidase activity. Members of this family have a perfectly conserved motif PYRT[SC]YP in a region N-terminal to the region of homology with the related uncharacterized protein.
Probab=28.35 E-value=92 Score=29.00 Aligned_cols=13 Identities=38% Similarity=0.761 Sum_probs=10.6
Q ss_pred CeEEEEecCCCHH
Q 027424 196 DLVRISVGIEDVN 208 (223)
Q Consensus 196 ~liRlsvGlEd~~ 208 (223)
|+-|+|||+|+.+
T Consensus 161 G~~risiGvqS~~ 173 (455)
T TIGR00538 161 GFNRLSFGVQDFN 173 (455)
T ss_pred CCCEEEEcCCCCC
Confidence 4579999999864
No 391
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=27.61 E-value=25 Score=32.05 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=22.0
Q ss_pred ccCCEEEEecCCCCC---C----CcCcccCCCc-EEEec
Q 027424 4 AHGALLLVDNSIMSP---V----LSRPLELGAD-IVMHS 34 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~---~----~~~pl~~GAD-ivv~S 34 (223)
+.++||++|.+|.++ + ..-+..+||| ++++.
T Consensus 285 ~~~~PV~~d~~Hs~G~r~~~~~~a~aAva~GAdg~~iE~ 323 (360)
T PRK12595 285 ETHLPVMVDVTHSTGRRDLLLPTAKAALAIGADGVMAEV 323 (360)
T ss_pred HhCCCEEEeCCCCCcchhhHHHHHHHHHHcCCCeEEEEe
Confidence 368999999999766 2 2335678998 66653
No 392
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=27.14 E-value=1.3e+02 Score=28.22 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=47.5
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-HhcCCCC-
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGL- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~~~g~~~- 72 (223)
+|+++|+++|.|+-...- +.+.-+..-.||.+ ..|+++|. .-+| +..+++ .+.+.+..-. -+.|.+.
T Consensus 235 ~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gG-lPig-A~~v~~-kV~~~i~~~~~l~hg~Tf~ 309 (433)
T KOG1401|consen 235 ECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITT--VAKPLGGG-LPIG-ATGVRD-KVAEMISPGDHLYHGGTFS 309 (433)
T ss_pred HHhhcCceEEeehhhhCccccchHHHHHHhCcCCccee--ehhhccCC-ceeE-EEeehH-HHHhhcCCCCccccCcccC
Confidence 378899999999986321 11222222347654 68999975 5554 454554 4544433211 1223333
Q ss_pred -ChHhHHHHHhcHHHH
Q 027424 73 -APFDCWICLRGVKTM 87 (223)
Q Consensus 73 -sp~da~ll~~~l~tl 87 (223)
+|..|......|+.+
T Consensus 310 gnpLacsa~~~~l~~l 325 (433)
T KOG1401|consen 310 GNPLACSAGIKVLDEL 325 (433)
T ss_pred CChhhhhHHHHHHHHH
Confidence 566777777777776
No 393
>PRK05628 coproporphyrinogen III oxidase; Validated
Probab=26.97 E-value=1.4e+02 Score=26.93 Aligned_cols=12 Identities=25% Similarity=0.703 Sum_probs=10.0
Q ss_pred CeEEEEecCCCH
Q 027424 196 DLVRISVGIEDV 207 (223)
Q Consensus 196 ~liRlsvGlEd~ 207 (223)
+.-|+|+|+|+.
T Consensus 118 G~~rvslGvQS~ 129 (375)
T PRK05628 118 GFTRVSLGMQSA 129 (375)
T ss_pred CCCEEEEecccC
Confidence 457999999985
No 394
>PF03930 Flp_N: Recombinase Flp protein N-terminus; InterPro: IPR022647 This entry describes the N-terminal domain of Recombinase Flp protein and is found in fungi. FLP proteins catalyse recombination between large inverted repetitions of the plasmid.; PDB: 1P4E_C 1FLO_C 1M6X_A.
Probab=25.77 E-value=1.2e+02 Score=21.70 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=24.8
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 191 RGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 191 ~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+.+....|++=.=|-++++|.++|+.|+..
T Consensus 27 fD~~~k~v~F~Yhlk~~~~L~~~L~~~~~p 56 (82)
T PF03930_consen 27 FDSDDKIVSFEYHLKKPQELQEGLEKAFPP 56 (82)
T ss_dssp EETTTTEEEEEES-S-HHHHHHHHHHHSTT
T ss_pred EecCCcEEEEEEecCCHHHHHHHHHHhcCC
Confidence 456788999999999999999999999874
No 395
>COG1920 Predicted nucleotidyltransferase, CobY/MobA/RfbA family [General function prediction only]
Probab=24.48 E-value=2e+02 Score=24.20 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=46.7
Q ss_pred CCHHHHHHHHhhcCc--ceeccccCCCCCCCC-CCc--cccCCCCC----HHHHHhcCC---CCCeEEEEecCCCHHHHH
Q 027424 144 GSLALSKHVVETTKY--FSITVSFGSVKSLIS-MPC--FMSHASIP----VEVRQARGL---TEDLVRISVGIEDVNDLI 211 (223)
Q Consensus 144 ~~~~~~~~f~~~l~l--~~~~~s~G~~~sli~-~p~--~~~h~~~~----~~~~~~~gi---~~~liRlsvGlEd~~dL~ 211 (223)
-+++..+++++..+- .-++++.||-...++ -+. ...+...+ -+..++.|. +..-.++|+=+++++||.
T Consensus 99 l~~~~i~~~~~~~~d~dvviaP~~gGGTn~L~~r~~~~~~~y~g~SF~~Hl~~Ark~G~~~~~~dSf~l~~DVDtpeDL~ 178 (210)
T COG1920 99 LSPEHIERALSAAKDADVVIAPGRGGGTNVLFARKSAFRPRYGGVSFLRHLEEARKRGLVVLTYDSFGLSADVDTPEDLV 178 (210)
T ss_pred CCHHHHHHHHHhcCCCcEEEecCCCCceEEEEEecccccccccCccHHHHHHHHHHcCCEEEEecccceecCCCCHHHHH
Confidence 367888899888876 558888886444332 221 11222222 234456675 345678999999999999
Q ss_pred HHHHH
Q 027424 212 SDLDK 216 (223)
Q Consensus 212 ~dl~~ 216 (223)
+-+..
T Consensus 179 e~~~h 183 (210)
T COG1920 179 EAFIH 183 (210)
T ss_pred HHHHh
Confidence 87753
No 396
>PF04214 DUF411: Protein of unknown function, DUF; InterPro: IPR007332 The function of the members of this bacterial protein family is unknown. Some members may be involved in conferring cation resistance.
Probab=24.23 E-value=1.3e+02 Score=20.89 Aligned_cols=23 Identities=30% Similarity=0.634 Sum_probs=19.5
Q ss_pred HHHHHHHHhcCCCeeEEEcCCCC
Q 027424 98 AQKIAEFLASHPRVKKVNYAGLP 120 (223)
Q Consensus 98 a~~la~~L~~~p~v~~V~yP~l~ 120 (223)
+..+.++|++.|.+.-+.-||.|
T Consensus 42 a~~I~~lL~e~P~~~GlavPGMP 64 (70)
T PF04214_consen 42 ADDIKRLLAEKPDARGLAVPGMP 64 (70)
T ss_pred HHHHHHHHhcCCCceEEeCCCCC
Confidence 35677889999999999999987
No 397
>PRK13347 coproporphyrinogen III oxidase; Provisional
Probab=22.74 E-value=1.7e+02 Score=27.27 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=10.7
Q ss_pred CeEEEEecCCCHHH
Q 027424 196 DLVRISVGIEDVND 209 (223)
Q Consensus 196 ~liRlsvGlEd~~d 209 (223)
|+-|+|||+|+.+|
T Consensus 162 G~~rvsiGvQS~~~ 175 (453)
T PRK13347 162 GFNRASFGVQDFDP 175 (453)
T ss_pred CCCEEEECCCCCCH
Confidence 35699999998643
No 398
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.52 E-value=2.4e+02 Score=24.07 Aligned_cols=118 Identities=14% Similarity=0.197 Sum_probs=61.4
Q ss_pred CCcEEEecccccccCCcccceeEEEec---ChhHHHHHHHHHHhcCCCCChHhHHHHHhcHHHHHHHH-----HHHHhHH
Q 027424 27 GADIVMHSATKFIAGHSDVMAGVLAVK---GERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRV-----EKQQDNA 98 (223)
Q Consensus 27 GADivv~S~tK~l~G~~d~~~G~v~~~---~~~~~~~l~~~~~~~g~~~sp~da~ll~~~l~tl~~R~-----~~~~~na 98 (223)
|.|++++++|- |.++.+ +.++..++...... ...-+ +--+..+|+.+..|- --.-+.-
T Consensus 67 ~vdvI~Y~Cts----------gS~i~G~~~d~ei~~~ie~~~~v--~vvTt--s~Avv~aL~al~a~ri~vlTPY~~evn 132 (238)
T COG3473 67 GVDVIVYGCTS----------GSLIGGPGYDKEIAQRIEEAKGV--PVVTT--STAVVEALNALGAQRISVLTPYIDEVN 132 (238)
T ss_pred ccCEEEEeccc----------eeeecCCchhHHHHHHHHhccCC--ceeec--hHHHHHHHHhhCcceEEEeccchhhhh
Confidence 78999998762 344433 34555555443211 11222 344677888875431 2233445
Q ss_pred HHHHHHHhcCCCeeEEEcCCCCCCcch-----------HHHHhhhC-CCCee-EEEE-eCCHHHHHHHHhhcCcc
Q 027424 99 QKIAEFLASHPRVKKVNYAGLPEHPGH-----------ELHYSQAK-GAGSV-LSFL-TGSLALSKHVVETTKYF 159 (223)
Q Consensus 99 ~~la~~L~~~p~v~~V~yP~l~~~~~~-----------~~~~~~~~-g~ggl-~sf~-~~~~~~~~~f~~~l~l~ 159 (223)
+..++||+++. ++-|..-||.-..+- .++++.+. +.-++ +|-. +.+.+...++=+.+++.
T Consensus 133 ~~e~ef~~~~G-feiv~~~~Lgi~dn~eigr~~P~~~y~lAk~~~~~~~DaiFiSCTnlRt~eii~~lE~~~G~P 206 (238)
T COG3473 133 QREIEFLEANG-FEIVDFKGLGITDNLEIGRQEPWAVYRLAKEVFTPDADAIFISCTNLRTFEIIEKLERDTGVP 206 (238)
T ss_pred hHHHHHHHhCC-eEEEEeeccCCcccchhcccChHHHHHHHHHhcCCCCCeEEEEeeccccHHHHHHHHHHhCCc
Confidence 67889999886 456666665533332 34444443 33333 3332 34555555554555443
No 399
>cd02958 UAS UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. FAF1 is a longer protein, compared to the other members of this family, having additional N-terminal domains, a ubiquitin-associated UBA domain and a nuclear targeting domain. FAF1 is an apoptotic signaling molecule that acts downstream in the Fas signal transduction pathway. It interacts with the cytoplasmic domain of Fas, but not to a Fas mutant that is deficient in signal transduction. ETEA is the protein product of a highly expressed gene in T-cells and eosinophils of atopic dermatitis patients. The presence of the ubiquitin-associated UBX domain in the proteins of this family suggests the possibility of their involvement in ubiquitination. Recently, FAF1 has been shown to interact with valosin-containing protein (VCP),
Probab=22.06 E-value=1.5e+02 Score=21.58 Aligned_cols=27 Identities=26% Similarity=0.343 Sum_probs=23.5
Q ss_pred CCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 194 TEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 194 ~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+...++...|..++++++..|+++...
T Consensus 87 ~g~~l~~~~G~~~~~~f~~~L~~~~~~ 113 (114)
T cd02958 87 TGEVLKVWSGNITPEDLLSQLIEFLEE 113 (114)
T ss_pred cCcEeEEEcCCCCHHHHHHHHHHHHhc
Confidence 346799999999999999999999763
No 400
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=20.95 E-value=4.7e+02 Score=23.83 Aligned_cols=129 Identities=22% Similarity=0.309 Sum_probs=70.8
Q ss_pred ccccCCEEEEecC------CCCCCC-cCcccCCCcEEEeccccccc-CCcccceeEEEecChhHHHHHHH----HHHhcC
Q 027424 2 AHAHGALLLVDNS------IMSPVL-SRPLELGADIVMHSATKFIA-GHSDVMAGVLAVKGERLAKELYF----LQNAEG 69 (223)
Q Consensus 2 a~~~g~~lvVDnT------~~s~~~-~~pl~~GADivv~S~tK~l~-G~~d~~~G~v~~~~~~~~~~l~~----~~~~~g 69 (223)
.|.+|-..|.|+. +|++++ +.--.+=.|||+. -|-++ || -+ ++|+.. +++.+.+.. +.+.+|
T Consensus 239 Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtm--gKpmGNGh--PV-a~Vatt-keIA~Af~atgv~YFNTyG 312 (452)
T KOG1403|consen 239 VRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTM--GKPMGNGH--PV-AAVATT-KEIAQAFHATGVEYFNTYG 312 (452)
T ss_pred HhcCCCeEEeehhhhcccccchhhhhhhhhccccchhee--cccCCCCC--ee-eEEecc-HHHHHHhccccceehhccC
Confidence 3668899999997 234432 1111233688864 57665 55 34 445444 456555432 234455
Q ss_pred CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHh--------cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 70 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA--------SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~--------~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
. +|-.|...+.-|+-+. -+...++|+.+-++|. +|+-|-.| +|.|-.+-+
T Consensus 313 G--nPVsCAv~laVm~v~e--~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv------------------RGvGLFiGI 370 (452)
T KOG1403|consen 313 G--NPVSCAVGLAVMRVCE--DENLQEHAQQVGEKLEVLLRRLKQKHECIGDV------------------RGVGLFIGI 370 (452)
T ss_pred C--CchhHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHhhhccceecc------------------ccceEEEee
Confidence 3 6766776655555332 2556666766666665 34444333 466766777
Q ss_pred Ee-CC-------HHHHHHHHhhcCc
Q 027424 142 LT-GS-------LALSKHVVETTKY 158 (223)
Q Consensus 142 ~~-~~-------~~~~~~f~~~l~l 158 (223)
++ ++ ...+...+.+++-
T Consensus 371 dLVkD~~tRtP~tk~A~~~v~rlke 395 (452)
T KOG1403|consen 371 DLVKDRKTRTPDTKEAHWVVNRLKE 395 (452)
T ss_pred eeecccccCCCcHHHHHHHHHHHHH
Confidence 76 22 2345556666653
No 401
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.21 E-value=50 Score=28.73 Aligned_cols=29 Identities=21% Similarity=0.302 Sum_probs=19.5
Q ss_pred cCCEEEEecCCCCCC-------CcCcccCCCc-EEEe
Q 027424 5 HGALLLVDNSIMSPV-------LSRPLELGAD-IVMH 33 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~-------~~~pl~~GAD-ivv~ 33 (223)
.+.||++|.+++.+. ...+..+||| ++++
T Consensus 195 ~~~pV~~D~sHs~G~~~~v~~~~~aAva~Ga~Gl~iE 231 (266)
T PRK13398 195 SHLPIIVDPSHATGRRELVIPMAKAAIAAGADGLMIE 231 (266)
T ss_pred cCCCEEEeCCCcccchhhHHHHHHHHHHcCCCEEEEe
Confidence 478999999986541 2335567887 5555
No 402
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=20.05 E-value=18 Score=32.05 Aligned_cols=49 Identities=20% Similarity=0.245 Sum_probs=33.7
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCC-CcEEEecccccccCCcccceeEEEe
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELG-ADIVMHSATKFIAGHSDVMAGVLAV 52 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~ 52 (223)
||-.|.+|-+|.|++|-- ..+...+-| .|.+|+|+.|-|--+ +||+++.
T Consensus 182 ica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp---vggaiia 237 (432)
T KOG3843|consen 182 ICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAIIA 237 (432)
T ss_pred HHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee---cchhHhh
Confidence 356788999999998632 112233344 589999999998755 5776653
Done!